Rw1G011040

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Forward (+)
24968700 .. 24970990
2291 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G011040.1

Sequence Viewer

Length: 1851 bp
ATGCAGCAAACTCTCATCTCTTTCTTTTGCTTCGTCTTCCTGGCTTTCTCATCCAAAGTCCTTTGTGAAAACCAAAACACCTGCAGAGAATTGAAGTGTGGGGAACATGGCCCAGCTATCAGATTCCCTTTTAGCCTCAAAGGTGGCTACCCAGAATATTGTGGGTATCCTGGGTTTCTTGTATCCTGCAATGAAAACAATGAAACCATTCTTGAGCTGCCAATCCCAGTCAAATTCGCAATCAAAAACATAGACTATAAGAATCAGTATATCCAGCTATATGACCCAGCAAATTGCTTGCTGGTGAAGCTATTGAAAGTCCCCAACATGTCAATCTCTCCCTTCTACTACTCAGAATACCACATGAATAATATTACCTTATTCAATTGTTCTTCAGCTGAAAGGCAACGGTCGTCCTATATGGACCAAGTCCCCTGTTTTGAAGGCCCTGCTGGCTACCAAATTTATTTGACTGATTCGATGTTTGACACCGAGGTAGTTCCCCTTCTGTCTTGCACAAAGATGTATGATTATTCAGTTCCATACAGCGGGTATGATTATTCAGTTCCATACAGCGGGTATTATTTTCCAACTCTTTATGTGGAATGGTCGGAACCAAATTGTAAACCATGCGAAGCACAGGGCAACAAATGTAGACTGAAGAATGGCACCGAAAGTAATGAAACTGAATGTCTTTATAAGAACGGAGGTTCACAAAAAAAGTTAGTAGCAACAGGTGCATCCCTGGGTTCATTTGTACTCGTACTACTTGTCGCTGCAGTTTATCGTGTCTACAGTTCTGACAGGAAAGAAAAAGAGAATCAATTAAAACTTGAAGTATTTTTAGAGGATTACAGAGCACTCAAACCAAGCAGATATTCTTATGCAGATATTAAGAGGATTACAAATCAATTCAAGGAAAAATTAGGCCAAGGAGCCTATGGGACTGTTTATAAGGGAAAACTTTCTGCTGAATGTTTTGTTGCGGTGAAAGTCCTCAATAGTACTAAGGGCAATGGGGAAGAGTTTGTAAATGAAGTAGGAACAATGGGACATATCCACCATGTCAATGTGGTTCGATTGGTTGGATTCTGCGCGGATGGATTTAGACGAGCTCTTATTTATGACTTCTTATCTAATGGTTCACTACAAGATTTCATTTCATCAGCAGACAATAACAAATCTTTCCTTGGTTGGGGTAAGTTGCAAGATATTTCTCTTGGAATAGCAAAAGGAATTGAATATCTGCACCAAGGATGCAATCAACGGATCCTACATTTTGATATCAAACCCCATAATGTTTTGCTAGACCATAACTTCAACGCAAAGATTTCTGATTTTGGTTTGGCCAAGTTATGTTCCAAGGATCAAAGTATAGTGTCAATGACTACCGCCAGAGGAACGATGGGGTACATTGCACCTGAAGTGTTCTCCAGGAACTTCGGAAATGTGTCCTATAAGTCAGATGTCTATAGCTATGGAATGGTACTGCTTGAGATTGTAGGAGGGAGAAACAACATTGGTTCAACCACAGAGAACTCCAATGAAGTTTACTATCCAGAATGGATCTATAATCTTCTAGAAGAAAAAGACGACCTACCTATCAATGTAGGGGGAGAAGGAAATGCTACAATTGCAAAGAGACTTGCGATTGTAGGTCTCTGGTGCATTCAATGGCACCCTGCAGATCGCCCTTCTATGCAAAGGGTGGTTCAGATGTTGGAAGGAGGAGAAAACTTAACCATGCCTCAAAATCCTTTTGCCTCTCAGCGTCCAGCAGGAACAAATACAAGTACACCTTCAAGAAATTTAAATATCCAACTAGAAGTAATTCCTGAGTTAGAAGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

616

Amino Acids

69.35

Weight (kDa)

6.02

Isoelectric Point (pI)

36.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 28 - 95 3.7e-18 Wall-associated receptor kinase galacturonan-binding
PK_Tyr_Ser-Thr PF07714 304 - 574 6.2e-45 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 305 - 572 1.1e-46 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 699, 954
AarI CACCTGC 1 cut(s) 89
Acc36I ACCTGC 1 cut(s) 89
AccB1I GGYRCC 2 cut(s) 668, 1677
AccI GTMKAC 2 cut(s) 655, 792
AccII CGCG 1 cut(s) 1097
AciI CCGC 5 cut(s) 549, 576, 986, 1097, 1392
AclWI GGATC 4 cut(s) 1264, 1277, 1374, 1574
AcoI YGGCCR 1 cut(s) 1347
AcsI RAATTY 3 cut(s) 233, 462, 1807
AcuI CTGAAG 3 cut(s) 378, 680, 1443
AfaI GTAC 6 cut(s) 759, 765, 1006, 1412, 1488, 1795
AfiI CCNNNNNNNGG 3 cut(s) 548, 575, 1195
AflIII ACRYGT 1 cut(s) 327
AjnI CCWGG 4 cut(s) 39, 169, 744, 1433
AjuI GAANNNNNNNTTGG 2 cut(s) 862, 894
AluBI AGCT 7 cut(s) 116, 217, 277, 310, 398, 1115, 1476
AluI AGCT 7 cut(s) 116, 217, 277, 310, 398, 1115, 1476
Alw21I GWGCWC 2 cut(s) 862, 1117
Alw26I GTCTC 2 cut(s) 1636, 1664
AlwI GGATC 4 cut(s) 1264, 1277, 1374, 1574
AoxI GGCC 4 cut(s) 109, 445, 928, 1347
ApeKI GCWGC 3 cut(s) 4, 217, 776
ApoI RAATTY 3 cut(s) 233, 462, 1807
Asp700I GAANNNNTTC 3 cut(s) 207, 964, 1830
AspLEI GCGC 1 cut(s) 1097
AspS9I GGNCC 3 cut(s) 110, 424, 446
AsuHPI GGTGA 2 cut(s) 316, 1000
AvaII GGWCC 1 cut(s) 424
BalI TGGCCA 1 cut(s) 1349
BamHI GGATCC 1 cut(s) 1269
BanI GGYRCC 2 cut(s) 668, 1677
BanII GRGCYC 1 cut(s) 1117
BarI GAAGNNNNNNTAC 2 cut(s) 489, 521
BbsI GAAGAC 1 cut(s) 28
Bbv12I GWGCWC 2 cut(s) 862, 1117
BbvI GCAGC 3 cut(s) 16, 204, 763
BccI CCATC 2 cut(s) 1094, 1399
BciT130I CCWGG 4 cut(s) 41, 171, 746, 1435
BciVI GTATCC 2 cut(s) 177, 193
BcoDI GTCTC 2 cut(s) 1636, 1664
BfaI CTAG 3 cut(s) 1307, 1580, 1823
BfmI CTRYAG 5 cut(s) 82, 777, 793, 1471, 1683
BfuAI ACCTGC 1 cut(s) 89
BfuI GTATCC 2 cut(s) 177, 193
BglI GCCNNNNNGGC 1 cut(s) 453
BisI GCNGC 3 cut(s) 5, 218, 777
BlsI GCNGC 3 cut(s) 6, 219, 778
BmcAI AGTACT 1 cut(s) 1006
Bme1390I CCNGG 4 cut(s) 41, 171, 746, 1435
Bme18I GGWCC 1 cut(s) 424
BmgT120I GGNCC 3 cut(s) 110, 424, 446
BmiI GGNNCC 5 cut(s) 615, 670, 937, 1271, 1679
BmrFI CCNGG 4 cut(s) 41, 171, 746, 1435
BmrI ACTGGG 1 cut(s) 221
BmsI GCATC 2 cut(s) 749, 1247
BmuI ACTGGG 1 cut(s) 221
BpiI GAAGAC 1 cut(s) 28
BpmI CTGGAG 1 cut(s) 1417
BpuEI CTTGAG 2 cut(s) 233, 1514
BsaI GGTCTC 1 cut(s) 1664
BsaJI CCNNGG 8 cut(s) 170, 492, 744, 745, 931, 1189, 1252, 1362
Bsc4I CCNNNNNNNGG 3 cut(s) 548, 575, 1195
Bse1I ACTGG 1 cut(s) 227
Bse3DI GCAATG 3 cut(s) 196, 1021, 1413
BseBI CCWGG 4 cut(s) 41, 171, 746, 1435
BseDI CCNNGG 8 cut(s) 170, 492, 744, 745, 931, 1189, 1252, 1362
BseGI GGATG 4 cut(s) 50, 740, 1105, 1262
BseLI CCNNNNNNNGG 3 cut(s) 548, 575, 1195
BseMI GCAATG 3 cut(s) 196, 1021, 1413
BseMII CTCAG 3 cut(s) 366, 1781, 1827
BseNI ACTGG 1 cut(s) 227
BseRI GAGGAG 1 cut(s) 1743
BseXI GCAGC 3 cut(s) 16, 204, 763
BseYI CCCAGC 2 cut(s) 112, 286
BsgI GTGCAG 1 cut(s) 1232
Bsh1236I CGCG 1 cut(s) 1097
Bsh1285I CGRYCG 1 cut(s) 413
BshFI GGCC 4 cut(s) 111, 447, 930, 1349
BshNI GGYRCC 2 cut(s) 668, 1677
BsiEI CGRYCG 1 cut(s) 413
BsiHKAI GWGCWC 2 cut(s) 862, 1117
BslFI GGGAC 4 cut(s) 305, 416, 958, 1065
BslI CCNNNNNNNGG 3 cut(s) 548, 575, 1195
BsmAI GTCTC 2 cut(s) 1636, 1664
BsmFI GGGAC 4 cut(s) 305, 416, 958, 1065
BsmI GAATGC 1 cut(s) 1668
BsnI GGCC 4 cut(s) 111, 447, 930, 1349
Bso31I GGTCTC 1 cut(s) 1664
Bsp1286I GDGCHC 2 cut(s) 862, 1117
Bsp143I GATC 4 cut(s) 1269, 1366, 1566, 1687
BspACI CCGC 5 cut(s) 549, 576, 986, 1097, 1392
BspANI GGCC 4 cut(s) 111, 447, 930, 1349
BspCNI CTCAG 3 cut(s) 365, 1780, 1828
BspFNI CGCG 1 cut(s) 1097
BspLI GGNNCC 5 cut(s) 615, 670, 937, 1271, 1679
BspMAI CTGCAG 3 cut(s) 86, 781, 1687
BspMI ACCTGC 1 cut(s) 89
BspPI GGATC 4 cut(s) 1264, 1277, 1374, 1574
BspT107I GGYRCC 2 cut(s) 668, 1677
BspTNI GGTCTC 1 cut(s) 1664
BsrDI GCAATG 3 cut(s) 196, 1021, 1413
BsrI ACTGG 1 cut(s) 227
BssECI CCNNGG 8 cut(s) 170, 492, 744, 745, 931, 1189, 1252, 1362
BssMI GATC 4 cut(s) 1269, 1366, 1566, 1687
BssT1I CCWWGG 4 cut(s) 931, 1189, 1252, 1362
Bst2UI CCWGG 4 cut(s) 41, 171, 746, 1435
Bst4CI ACNGT 3 cut(s) 411, 797, 949
Bst6I CTCTTC 2 cut(s) 1017, 1839
BstAPI GCANNNNNTGC 1 cut(s) 737
BstC8I GCNNGC 2 cut(s) 299, 454
BstDEI CTNAG 4 cut(s) 352, 1008, 1767, 1836
BstF5I GGATG 4 cut(s) 50, 740, 1105, 1262
BstFNI CGCG 1 cut(s) 1097
BstHHI GCGC 1 cut(s) 1097
BstKTI GATC 4 cut(s) 1272, 1369, 1569, 1690
BstMAI GTCTC 2 cut(s) 1636, 1664
BstMBI GATC 4 cut(s) 1269, 1366, 1566, 1687
BstMCI CGRYCG 1 cut(s) 413
BstMWI GCNNNNNNNGC 4 cut(s) 307, 453, 737, 1634
BstNI CCWGG 4 cut(s) 41, 171, 746, 1435
BstNSI RCATGY 1 cut(s) 331
BstSCI CCNGG 4 cut(s) 39, 169, 744, 1433
BstSFI CTRYAG 5 cut(s) 82, 777, 793, 1471, 1683
BstUI CGCG 1 cut(s) 1097
BstV1I GCAGC 3 cut(s) 16, 204, 763
BstV2I GAAGAC 1 cut(s) 28
BstX2I RGATCY 2 cut(s) 1269, 1566
BstYI RGATCY 2 cut(s) 1269, 1566
BsuI GTATCC 2 cut(s) 177, 193
BsuRI GGCC 4 cut(s) 111, 447, 930, 1349
BtsCI GGATG 4 cut(s) 50, 740, 1105, 1262
BveI ACCTGC 1 cut(s) 89
Cac8I GCNNGC 2 cut(s) 299, 454
CfoI GCGC 1 cut(s) 1097
Cfr13I GGNCC 3 cut(s) 110, 424, 446
CseI GACGC 1 cut(s) 1760
Csp6I GTAC 6 cut(s) 758, 764, 1005, 1411, 1487, 1794
CviAII CATG 6 cut(s) 107, 328, 364, 630, 1064, 1744
CviQI GTAC 6 cut(s) 758, 764, 1005, 1411, 1487, 1794
DdeI CTNAG 4 cut(s) 352, 1008, 1767, 1836
DpnI GATC 4 cut(s) 1271, 1368, 1568, 1689
DpnII GATC 4 cut(s) 1269, 1366, 1566, 1687
DraI TTTAAA 1 cut(s) 1812
EaeI YGGCCR 1 cut(s) 1347
Eam1104I CTCTTC 2 cut(s) 1017, 1839
EarI CTCTTC 2 cut(s) 1017, 1839
Ecl136II GAGCTC 1 cut(s) 1115
Eco130I CCWWGG 4 cut(s) 931, 1189, 1252, 1362
Eco24I GRGCYC 1 cut(s) 1117
Eco31I GGTCTC 1 cut(s) 1664
Eco32I GATATC 1 cut(s) 1285
Eco47I GGWCC 1 cut(s) 424
Eco53kI GAGCTC 1 cut(s) 1115
Eco57I CTGAAG 3 cut(s) 378, 680, 1443
EcoICRI GAGCTC 1 cut(s) 1115
EcoO109I RGGNCCY 1 cut(s) 446
EcoRII CCWGG 4 cut(s) 39, 169, 744, 1433
EcoRV GATATC 1 cut(s) 1285
EcoT14I CCWWGG 4 cut(s) 931, 1189, 1252, 1362
EcoT38I GRGCYC 1 cut(s) 1117
ErhI CCWWGG 4 cut(s) 931, 1189, 1252, 1362
FaeI CATG 6 cut(s) 110, 331, 367, 633, 1067, 1747
FalI AAGNNNNNCTT 2 cut(s) 1783, 1815
FaqI GGGAC 4 cut(s) 305, 416, 958, 1065
FatI CATG 6 cut(s) 106, 327, 363, 629, 1063, 1743
FauI CCCGC 2 cut(s) 542, 569
FblI GTMKAC 2 cut(s) 655, 792
Fnu4HI GCNGC 3 cut(s) 5, 218, 777
FokI GGATG 4 cut(s) 37, 727, 1112, 1269
FriOI GRGCYC 1 cut(s) 1117
Fsp4HI GCNGC 3 cut(s) 5, 218, 777
FspBI CTAG 3 cut(s) 1307, 1580, 1823
GlaI GCGC 1 cut(s) 1096
GluI GCNGC 3 cut(s) 5, 218, 777
GsaI CCCAGC 2 cut(s) 116, 290
GsuI CTGGAG 1 cut(s) 1417
HaeIII GGCC 4 cut(s) 111, 447, 930, 1349
HgaI GACGC 1 cut(s) 1760
HhaI GCGC 1 cut(s) 1097
Hin1II CATG 6 cut(s) 110, 331, 367, 633, 1067, 1747
Hin6I GCGC 1 cut(s) 1095
HinP1I GCGC 1 cut(s) 1095
HinfI GANTC 5 cut(s) 123, 262, 476, 820, 1089
HphI GGTGA 2 cut(s) 316, 1000
Hpy166II GTNNAC 7 cut(s) 626, 656, 713, 793, 1145, 1552, 1796
Hpy188I TCNGA 8 cut(s) 122, 355, 613, 802, 1336, 1445, 1465, 1716
Hpy188III TCNNGA 5 cut(s) 212, 1559, 1580, 1803, 1835
Hpy8I GTNNAC 7 cut(s) 626, 656, 713, 793, 1145, 1552, 1796
HpyAV CCTTC 7 cut(s) 352, 437, 515, 1613, 1704, 1718, 1809
HpyCH4III ACNGT 3 cut(s) 411, 797, 949
HpyF10VI GCNNNNNNNGC 4 cut(s) 307, 453, 737, 1634
HpyF3I CTNAG 4 cut(s) 352, 1008, 1767, 1836
Hsp92II CATG 6 cut(s) 110, 331, 367, 633, 1067, 1747
HspAI GCGC 1 cut(s) 1095
Kzo9I GATC 4 cut(s) 1269, 1366, 1566, 1687
LmnI GCTCC 1 cut(s) 935
Lsp1109I GCAGC 3 cut(s) 16, 204, 763
LweI GCATC 2 cut(s) 749, 1247
MaeI CTAG 3 cut(s) 1307, 1580, 1823
MalI GATC 4 cut(s) 1271, 1368, 1568, 1689
MboI GATC 4 cut(s) 1269, 1366, 1566, 1687
MboII GAAGA 6 cut(s) 28, 384, 673, 1034, 1568, 1595
MfeI CAATTG 2 cut(s) 385, 1632
MflI RGATCY 2 cut(s) 1269, 1566
MhlI GDGCHC 2 cut(s) 862, 1117
MlsI TGGCCA 1 cut(s) 1349
MluNI TGGCCA 1 cut(s) 1349
MmeI TCCRAC 5 cut(s) 591, 614, 1066, 1701, 1843
Mox20I TGGCCA 1 cut(s) 1349
MroXI GAANNNNTTC 3 cut(s) 207, 964, 1830
MscI TGGCCA 1 cut(s) 1349
MseI TTAA 4 cut(s) 827, 894, 1739, 1811
MslI CAYNNNNRTG 2 cut(s) 521, 1068
Msp20I TGGCCA 1 cut(s) 1349
MspA1I CMGCKG 3 cut(s) 398, 549, 576
MspR9I CCNGG 4 cut(s) 41, 171, 746, 1435
MunI CAATTG 2 cut(s) 385, 1632
Mva1269I GAATGC 1 cut(s) 1668
MvaI CCWGG 4 cut(s) 41, 171, 746, 1435
MvnI CGCG 1 cut(s) 1097
MwoI GCNNNNNNNGC 4 cut(s) 307, 453, 737, 1634
NdeII GATC 4 cut(s) 1269, 1366, 1566, 1687
NlaIII CATG 6 cut(s) 110, 331, 367, 633, 1067, 1747
NlaIV GGNNCC 5 cut(s) 615, 670, 937, 1271, 1679
NspI RCATGY 1 cut(s) 331
PaqCI CACCTGC 1 cut(s) 89
PasI CCCWGGG 1 cut(s) 745
PciI ACATGT 1 cut(s) 327
PctI GAATGC 1 cut(s) 1668
PdmI GAANNNNTTC 3 cut(s) 207, 964, 1830
PfeI GAWTC 5 cut(s) 123, 262, 476, 820, 1089
PflFI GACNNNGTC 1 cut(s) 428
PfoI TCCNGGA 1 cut(s) 1433
PkrI GCNGC 3 cut(s) 6, 219, 778
PscI ACATGT 1 cut(s) 327
PsiI TTATAA 2 cut(s) 699, 954
Psp124BI GAGCTC 1 cut(s) 1117
Psp6I CCWGG 4 cut(s) 39, 169, 744, 1433
PspFI CCCAGC 2 cut(s) 112, 286
PspGI CCWGG 4 cut(s) 39, 169, 744, 1433
PspN4I GGNNCC 5 cut(s) 615, 670, 937, 1271, 1679
PspPI GGNCC 3 cut(s) 110, 424, 446
PstI CTGCAG 3 cut(s) 86, 781, 1687
PsuI RGATCY 2 cut(s) 1269, 1566
PsyI GACNNNGTC 1 cut(s) 428
PvuII CAGCTG 1 cut(s) 398
RsaI GTAC 6 cut(s) 759, 765, 1006, 1412, 1488, 1795
RsaNI GTAC 6 cut(s) 758, 764, 1005, 1411, 1487, 1794
RseI CAYNNNNRTG 2 cut(s) 521, 1068
SacI GAGCTC 1 cut(s) 1117
SaqAI TTAA 4 cut(s) 827, 894, 1739, 1811
SatI GCNGC 3 cut(s) 5, 218, 777
Sau3AI GATC 4 cut(s) 1269, 1366, 1566, 1687
Sau96I GGNCC 3 cut(s) 110, 424, 446
ScaI AGTACT 1 cut(s) 1006
ScrFI CCNGG 4 cut(s) 41, 171, 746, 1435
SduI GDGCHC 2 cut(s) 862, 1117
SfaNI GCATC 2 cut(s) 749, 1247
SfcI CTRYAG 5 cut(s) 82, 777, 793, 1471, 1683
SinI GGWCC 1 cut(s) 424
SmiI ATTTAAAT 1 cut(s) 1812
SmiMI CAYNNNNRTG 2 cut(s) 521, 1068
SmlI CTYRAG 2 cut(s) 212, 1493
SmoI CTYRAG 2 cut(s) 212, 1493
SsiI CCGC 5 cut(s) 549, 576, 986, 1097, 1392
SspI AATATT 2 cut(s) 158, 373
SspMI CTAG 3 cut(s) 1307, 1580, 1823
SstI GAGCTC 1 cut(s) 1117
StyD4I CCNGG 4 cut(s) 39, 169, 744, 1433
StyI CCWWGG 4 cut(s) 931, 1189, 1252, 1362
SwaI ATTTAAAT 1 cut(s) 1812
TaaI ACNGT 3 cut(s) 411, 797, 949
TaqI TCGA 2 cut(s) 479, 1078
TatI WGTACW 3 cut(s) 757, 1004, 1793
TfiI GAWTC 5 cut(s) 123, 262, 476, 820, 1089
Tru1I TTAA 4 cut(s) 827, 894, 1739, 1811
Tru9I TTAA 4 cut(s) 827, 894, 1739, 1811
TseI GCWGC 3 cut(s) 4, 217, 776
TspDTI ATGAA 9 cut(s) 207, 216, 380, 696, 741, 1050, 1147, 1152, 1560
TspGWI ACGGA 2 cut(s) 720, 1282
Tth111I GACNNNGTC 1 cut(s) 428
VpaK11BI GGWCC 1 cut(s) 424
XapI RAATTY 3 cut(s) 233, 462, 1807
XbaI TCTAGA 1 cut(s) 1579
XceI RCATGY 1 cut(s) 331
XcmI CCANNNNNNNNNTGG 2 cut(s) 938, 1402
XmiI GTMKAC 2 cut(s) 655, 792
XmnI GAANNNNTTC 3 cut(s) 207, 964, 1830
XspI CTAG 3 cut(s) 1307, 1580, 1823
ZrmI AGTACT 1 cut(s) 1006
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.