Rmu_ssc0000388.1_g000040

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000388.1
OG0000107
Physical Location & Seq
Reverse (-)
193702 .. 195797
2096 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000388.1_g000040.1.cds

Sequence Viewer

Length: 1827 bp
atgcttctcaatgtgttatgcagttggttgctcatagtcaccgttctagatgtagatattgttgtgcatggcgggcccgtaggtcccgaaaattgcacacaggctcgatgtaaagaccatggccctgcgatccgattcccatttcgactaaaaggaatgcaaccactccattgcggttacccaggctttgatctgtcatgcaacaaagacaagcagactgtgctccagatcaccccatcatcagccgacaagttcttggttaaaaggattgattacacagctcaggaaattgaaatatatatttataataaacattatgattattacgatgatttcaaagatatttgtattcctagacagattttcgagctcagttcctctccattcgaattctcagacgcccaacggaaaactgactataccatattcagttgtccaccgtcagatgaaagagatcggcttccttatcagctggcgaaactgagcccttgctttggcaatcacagcaacaagatgtatgcttttgaagattcagaccttgaatccacgcccgagctggtgtcgtgtaccaaggtggaagattacagatcagtaccatcttttatcatgcagcctcttctgaagctcaaatggtccagaccatcgtgtaaacgttgcgaagagatgggcaagacatgcggattgctgagtcaagttgcagatgaccagaccactcaagaaactcaatgtttagatgtgccaaaaggtcctaatcgtggaagacaaatcttagagatattaggcatttgtgcactcgttacggttttcataggagcggcgactgtattgtactatgtgtatagttctaagaaaatagaagaagaaagtcaattgagaattgaaaagtttttggatgattatagagctcttaaaccaagtagatatgcctatgatgatattaggcgaataacaaatcgatttgaggacaagttgggccaaggagcttatggcaccgtgtacaaaggaaagctttcctctgaattacttgttgctgtgaaaatcctcgacagttcaaatgaaaagggggaagatttcattaatgaagtgggaacaatgggtctcatccaccatgtcaatgtggttcgcttggttggcttttgtgctgatggattcatacgagctcttatttatgagtacttaccaaatggttcattgcagaatttcttgtcatctgcagatgataagaactcatttcttggttgggaaaagttgcaaaatattgctttaggtgtagctaaaggaattgaatatcttcaccaagggtgtgaccagagaatcctccattttgatatcaaacctaataacattttgctagaccaggatttcactccaaaagtttctgattttggtctagccaagttgtgctctaaggatcagagtgcaatatccatgactacagctagggggaccatgggctacattgcaccagaagttttctctaggaacttcggaaatgtgtcctataagtcggatgtatatagttttggagtcttgctgcttgaaatggttgggggaaagaaaaattttaaagttatggaggactccaccagccatatctatttcccagaatggatttataaccttttagaacaagggagcgatctacgaatccatattgaggacgaaggagatgttaaagttgctcgaaaacttgcaatcattggtctatggtgcattcaatggcatccggtagatcgcccatccatgaacattgtagttcaaatgttggagagagaaggtgacaatctaaccatgcctccttatccctttgcctctacttcaaattaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase Pkinase_Tyr

Protein Analysis

608

Amino Acids

68.96

Weight (kDa)

5.6

Isoelectric Point (pI)

45.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 306, 1617
AccB1I GGYRCC 1 cut(s) 989
AccBSI CCGCTC 1 cut(s) 815
AciI CCGC 4 cut(s) 72, 174, 678, 815
AclI AACGTT 1 cut(s) 652
AclWI GGATC 2 cut(s) 124, 1419
AcsI RAATTY 3 cut(s) 389, 1198, 1561
AcuI CTGAAG 1 cut(s) 641
AcyI GRCGYC 1 cut(s) 399
AfaI GTAC 5 cut(s) 568, 594, 830, 998, 1175
AfiI CCNNNNNNNGG 3 cut(s) 494, 755, 1657
AjnI CCWGG 2 cut(s) 181, 1356
Alw21I GWGCWC 6 cut(s) 225, 372, 793, 907, 1162, 1406
Alw26I GTCTC 1 cut(s) 1103
Alw44I GTGCAC 1 cut(s) 789
AlwI GGATC 2 cut(s) 124, 1419
Ama87I CYCGRG 1 cut(s) 551
AoxI GGCC 3 cut(s) 74, 121, 973
ApaI GGGCCC 1 cut(s) 78
ApaLI GTGCAC 1 cut(s) 789
ApeKI GCWGC 2 cut(s) 610, 1534
ApoI RAATTY 3 cut(s) 389, 1198, 1561
AseI ATTAAT 1 cut(s) 1077
Asp700I GAANNNNTTC 2 cut(s) 1009, 1290
AspS9I GGNCC 8 cut(s) 74, 75, 83, 122, 633, 746, 973, 1446
AsuHPI GGTGA 4 cut(s) 31, 223, 1286, 1790
AsuII TTCGAA 1 cut(s) 387
AvaI CYCGRG 1 cut(s) 551
AvaII GGWCC 4 cut(s) 83, 633, 746, 1446
BaeGI GKGCMC 2 cut(s) 78, 793
BanI GGYRCC 1 cut(s) 989
BanII GRGCYC 5 cut(s) 78, 372, 488, 907, 1162
BbsI GAAGAC 1 cut(s) 766
Bbv12I GWGCWC 6 cut(s) 225, 372, 793, 907, 1162, 1406
BbvI GCAGC 2 cut(s) 622, 1521
BccI CCATC 6 cut(s) 244, 604, 649, 658, 1139, 1747
BciT130I CCWGG 2 cut(s) 183, 1358
BcoDI GTCTC 1 cut(s) 1103
BfaI CTAG 6 cut(s) 47, 354, 1352, 1391, 1440, 1479
BfmI CTRYAG 2 cut(s) 1212, 1434
BisI GCNGC 3 cut(s) 611, 816, 1535
BlsI GCNGC 3 cut(s) 612, 817, 1536
BmcAI AGTACT 1 cut(s) 1175
Bme1390I CCNGG 2 cut(s) 183, 1358
Bme18I GGWCC 4 cut(s) 83, 633, 746, 1446
BmeT110I CYCGRG 1 cut(s) 551
BmgT120I GGNCC 8 cut(s) 74, 75, 83, 122, 633, 746, 973, 1446
BmiI GGNNCC 4 cut(s) 76, 85, 991, 1447
BmrFI CCNGG 2 cut(s) 183, 1358
BmsI GCATC 1 cut(s) 1732
BpiI GAAGAC 1 cut(s) 766
BpmI CTGGAG 1 cut(s) 209
Bpu10I CCTNAGC 1 cut(s) 282
Bpu14I TTCGAA 1 cut(s) 387
BpuEI CTTGAG 1 cut(s) 699
Bsa29I ATCGAT 1 cut(s) 955
BsaHI GRCGYC 1 cut(s) 399
BsaI GGTCTC 1 cut(s) 1103
BsaJI CCNNGG 6 cut(s) 118, 181, 570, 976, 1297, 1449
BsaWI WCCGGW 1 cut(s) 1726
BsaXI ACNNNNNCTCC 2 cut(s) 1780, 1810
Bsc4I CCNNNNNNNGG 3 cut(s) 494, 755, 1657
Bse3DI GCAATG 3 cut(s) 169, 1190, 1458
BseBI CCWGG 2 cut(s) 183, 1358
BseCI ATCGAT 1 cut(s) 955
BseDI CCNNGG 6 cut(s) 118, 181, 570, 976, 1297, 1449
BseGI GGATG 5 cut(s) 898, 1101, 1516, 1723, 1739
BseLI CCNNNNNNNGG 3 cut(s) 494, 755, 1657
BseMI GCAATG 3 cut(s) 169, 1190, 1458
BseMII CTCAG 5 cut(s) 296, 385, 408, 473, 677
BseSI GKGCMC 2 cut(s) 78, 793
BseXI GCAGC 2 cut(s) 622, 1521
BshFI GGCC 3 cut(s) 76, 123, 975
BshNI GGYRCC 1 cut(s) 989
BshVI ATCGAT 1 cut(s) 955
BsiHKAI GWGCWC 6 cut(s) 225, 372, 793, 907, 1162, 1406
BsiHKCI CYCGRG 1 cut(s) 551
BsiSI CCGG 1 cut(s) 1727
BslFI GGGAC 2 cut(s) 69, 1459
BslI CCNNNNNNNGG 3 cut(s) 494, 755, 1657
BsmAI GTCTC 1 cut(s) 1103
BsmFI GGGAC 2 cut(s) 69, 1459
BsmI GAATGC 2 cut(s) 162, 1713
BsnI GGCC 3 cut(s) 76, 123, 975
Bso31I GGTCTC 1 cut(s) 1103
BsoBI CYCGRG 1 cut(s) 551
Bsp119I TTCGAA 1 cut(s) 387
Bsp120I GGGCCC 1 cut(s) 74
Bsp1286I GDGCHC 8 cut(s) 78, 225, 372, 488, 793, 907, 1162, 1406
Bsp1407I TGTACA 1 cut(s) 996
Bsp143I GATC 8 cut(s) 129, 190, 228, 454, 587, 1411, 1639, 1732
Bsp19I CCATGG 2 cut(s) 118, 1449
BspACI CCGC 4 cut(s) 72, 174, 678, 815
BspANI GGCC 3 cut(s) 76, 123, 975
BspCNI CTCAG 5 cut(s) 295, 384, 407, 474, 678
BspDI ATCGAT 1 cut(s) 955
BspLI GGNNCC 4 cut(s) 76, 85, 991, 1447
BspMAI CTGCAG 1 cut(s) 1216
BspPI GGATC 2 cut(s) 124, 1419
BspT104I TTCGAA 1 cut(s) 387
BspT107I GGYRCC 1 cut(s) 989
BspTNI GGTCTC 1 cut(s) 1103
BsrBI CCGCTC 1 cut(s) 815
BsrDI GCAATG 3 cut(s) 169, 1190, 1458
BsrGI TGTACA 1 cut(s) 996
BssECI CCNNGG 6 cut(s) 118, 181, 570, 976, 1297, 1449
BssMI GATC 8 cut(s) 129, 190, 228, 454, 587, 1411, 1639, 1732
BssNI GRCGYC 1 cut(s) 399
BssT1I CCWWGG 5 cut(s) 118, 570, 976, 1297, 1449
Bst2UI CCWGG 2 cut(s) 183, 1358
Bst4CI ACNGT 7 cut(s) 43, 220, 441, 802, 823, 994, 1049
Bst6I CTCTTC 2 cut(s) 621, 654
BstACI GRCGYC 1 cut(s) 399
BstAPI GCANNNNNTGC 2 cut(s) 220, 675
BstAUI TGTACA 1 cut(s) 996
BstBI TTCGAA 1 cut(s) 387
BstC8I GCNNGC 2 cut(s) 74, 474
BstDEI CTNAG 8 cut(s) 282, 371, 394, 482, 686, 769, 846, 1407
BstDSI CCRYGG 2 cut(s) 118, 1449
BstEII GGTNACC 1 cut(s) 176
BstF5I GGATG 5 cut(s) 898, 1101, 1516, 1723, 1739
BstKTI GATC 8 cut(s) 132, 193, 231, 457, 590, 1414, 1642, 1735
BstMAI GTCTC 1 cut(s) 1103
BstMBI GATC 8 cut(s) 129, 190, 228, 454, 587, 1411, 1639, 1732
BstMWI GCNNNNNNNGC 5 cut(s) 73, 220, 504, 675, 1131
BstNI CCWGG 2 cut(s) 183, 1358
BstNSI RCATGY 1 cut(s) 678
BstPI GGTNACC 1 cut(s) 176
BstSCI CCNGG 2 cut(s) 181, 1356
BstSFI CTRYAG 2 cut(s) 1212, 1434
BstSLI GKGCMC 2 cut(s) 78, 793
BstV1I GCAGC 2 cut(s) 622, 1521
BstV2I GAAGAC 1 cut(s) 766
Bsu15I ATCGAT 1 cut(s) 955
BsuRI GGCC 3 cut(s) 76, 123, 975
BsuTUI ATCGAT 1 cut(s) 955
BtgI CCRYGG 2 cut(s) 118, 1449
BtsCI GGATG 5 cut(s) 898, 1101, 1516, 1723, 1739
Cac8I GCNNGC 2 cut(s) 74, 474
Cfr13I GGNCC 8 cut(s) 74, 75, 83, 122, 633, 746, 973, 1446
ClaI ATCGAT 1 cut(s) 955
CseI GACGC 1 cut(s) 407
Csp6I GTAC 5 cut(s) 567, 593, 829, 997, 1174
CviQI GTAC 5 cut(s) 567, 593, 829, 997, 1174
DdeI CTNAG 8 cut(s) 282, 371, 394, 482, 686, 769, 846, 1407
DpnI GATC 8 cut(s) 131, 192, 230, 456, 589, 1413, 1641, 1734
DpnII GATC 8 cut(s) 129, 190, 228, 454, 587, 1411, 1639, 1732
DraI TTTAAA 1 cut(s) 1567
Eam1104I CTCTTC 2 cut(s) 621, 654
EarI CTCTTC 2 cut(s) 621, 654
Ecl136II GAGCTC 3 cut(s) 370, 905, 1160
Eco130I CCWWGG 5 cut(s) 118, 570, 976, 1297, 1449
Eco24I GRGCYC 5 cut(s) 78, 372, 488, 907, 1162
Eco31I GGTCTC 1 cut(s) 1103
Eco32I GATATC 1 cut(s) 1330
Eco47I GGWCC 4 cut(s) 83, 633, 746, 1446
Eco53kI GAGCTC 3 cut(s) 370, 905, 1160
Eco57I CTGAAG 1 cut(s) 641
Eco88I CYCGRG 1 cut(s) 551
Eco91I GGTNACC 1 cut(s) 176
EcoICRI GAGCTC 3 cut(s) 370, 905, 1160
EcoO109I RGGNCCY 2 cut(s) 83, 746
EcoO65I GGTNACC 1 cut(s) 176
EcoRI GAATTC 1 cut(s) 389
EcoRII CCWGG 2 cut(s) 181, 1356
EcoRV GATATC 1 cut(s) 1330
EcoT14I CCWWGG 5 cut(s) 118, 570, 976, 1297, 1449
EcoT38I GRGCYC 5 cut(s) 78, 372, 488, 907, 1162
ErhI CCWWGG 5 cut(s) 118, 570, 976, 1297, 1449
FalI AAGNNNNNCTT 2 cut(s) 993, 1025
FaqI GGGAC 2 cut(s) 69, 1459
FauI CCCGC 1 cut(s) 65
Fnu4HI GCNGC 3 cut(s) 611, 816, 1535
FokI GGATG 5 cut(s) 905, 1088, 1523, 1710, 1726
FriOI GRGCYC 5 cut(s) 78, 372, 488, 907, 1162
Fsp4HI GCNGC 3 cut(s) 611, 816, 1535
FspBI CTAG 6 cut(s) 47, 354, 1352, 1391, 1440, 1479
GluI GCNGC 3 cut(s) 611, 816, 1535
GsuI CTGGAG 1 cut(s) 209
HaeIII GGCC 3 cut(s) 76, 123, 975
HapII CCGG 1 cut(s) 1727
HgaI GACGC 1 cut(s) 407
Hin1I GRCGYC 1 cut(s) 399
HindIII AAGCTT 1 cut(s) 1007
HinfI GANTC 9 cut(s) 135, 530, 542, 688, 1149, 1314, 1527, 1580, 1647
HpaII CCGG 1 cut(s) 1727
HphI GGTGA 4 cut(s) 31, 223, 1286, 1790
Hpy166II GTNNAC 5 cut(s) 437, 567, 650, 791, 997
Hpy188III TCNNGA 6 cut(s) 47, 86, 226, 284, 636, 716
Hpy8I GTNNAC 5 cut(s) 437, 567, 650, 791, 997
HpyAV CCTTC 2 cut(s) 1658, 1769
HpyCH4III ACNGT 7 cut(s) 43, 220, 441, 802, 823, 994, 1049
HpyCH4IV ACGT 1 cut(s) 652
HpyF10VI GCNNNNNNNGC 5 cut(s) 73, 220, 504, 675, 1131
HpyF3I CTNAG 8 cut(s) 282, 371, 394, 482, 686, 769, 846, 1407
HpySE526I ACGT 1 cut(s) 652
Hsp92I GRCGYC 1 cut(s) 399
Kzo9I GATC 8 cut(s) 129, 190, 228, 454, 587, 1411, 1639, 1732
LmnI GCTCC 4 cut(s) 228, 812, 980, 1635
Lsp1109I GCAGC 2 cut(s) 622, 1521
LweI GCATC 1 cut(s) 1732
MaeI CTAG 6 cut(s) 47, 354, 1352, 1391, 1440, 1479
MaeII ACGT 1 cut(s) 652
MaeIII GTNAC 5 cut(s) 37, 176, 796, 1304, 1778
MalI GATC 8 cut(s) 131, 192, 230, 456, 589, 1413, 1641, 1734
MbiI CCGCTC 1 cut(s) 815
MboI GATC 8 cut(s) 129, 190, 228, 454, 587, 1411, 1639, 1732
MboII GAAGA 9 cut(s) 539, 590, 608, 671, 771, 869, 872, 1079, 1283
MfeI CAATTG 1 cut(s) 869
MhlI GDGCHC 8 cut(s) 78, 225, 372, 488, 793, 907, 1162, 1406
MlyI GAGTC 3 cut(s) 697, 1536, 1574
MmeI TCCRAC 2 cut(s) 1488, 1746
MroXI GAANNNNTTC 2 cut(s) 1009, 1290
MseI TTAA 6 cut(s) 261, 909, 1077, 1566, 1674, 1825
MslI CAYNNNNRTG 1 cut(s) 1113
MspA1I CMGCKG 1 cut(s) 472
MspI CCGG 1 cut(s) 1727
MspR9I CCNGG 2 cut(s) 183, 1358
MunI CAATTG 1 cut(s) 869
Mva1269I GAATGC 2 cut(s) 162, 1713
MvaI CCWGG 2 cut(s) 183, 1358
MwoI GCNNNNNNNGC 5 cut(s) 73, 220, 504, 675, 1131
NcoI CCATGG 2 cut(s) 118, 1449
NdeII GATC 8 cut(s) 129, 190, 228, 454, 587, 1411, 1639, 1732
NlaIV GGNNCC 4 cut(s) 76, 85, 991, 1447
NmuCI GTSAC 3 cut(s) 37, 1304, 1778
NspI RCATGY 1 cut(s) 678
NspV TTCGAA 1 cut(s) 387
PctI GAATGC 2 cut(s) 162, 1713
PdmI GAANNNNTTC 2 cut(s) 1009, 1290
PfeI GAWTC 6 cut(s) 135, 530, 542, 1149, 1314, 1647
PkrI GCNGC 3 cut(s) 612, 817, 1536
PleI GAGTC 3 cut(s) 696, 1535, 1574
PpsI GAGTC 3 cut(s) 696, 1535, 1574
PpuMI RGGWCCY 2 cut(s) 83, 746
PshBI ATTAAT 1 cut(s) 1077
PsiI TTATAA 2 cut(s) 306, 1617
Psp124BI GAGCTC 3 cut(s) 372, 907, 1162
Psp1406I AACGTT 1 cut(s) 652
Psp5II RGGWCCY 2 cut(s) 83, 746
Psp6I CCWGG 2 cut(s) 181, 1356
PspEI GGTNACC 1 cut(s) 176
PspGI CCWGG 2 cut(s) 181, 1356
PspN4I GGNNCC 4 cut(s) 76, 85, 991, 1447
PspOMI GGGCCC 1 cut(s) 74
PspPI GGNCC 8 cut(s) 74, 75, 83, 122, 633, 746, 973, 1446
PspPPI RGGWCCY 2 cut(s) 83, 746
PstI CTGCAG 1 cut(s) 1216
PvuII CAGCTG 1 cut(s) 472
RsaI GTAC 5 cut(s) 568, 594, 830, 998, 1175
RsaNI GTAC 5 cut(s) 567, 593, 829, 997, 1174
RseI CAYNNNNRTG 1 cut(s) 1113
SacI GAGCTC 3 cut(s) 372, 907, 1162
SaqAI TTAA 6 cut(s) 261, 909, 1077, 1566, 1674, 1825
SatI GCNGC 3 cut(s) 611, 816, 1535
Sau3AI GATC 8 cut(s) 129, 190, 228, 454, 587, 1411, 1639, 1732
Sau96I GGNCC 8 cut(s) 74, 75, 83, 122, 633, 746, 973, 1446
ScaI AGTACT 1 cut(s) 1175
SchI GAGTC 3 cut(s) 697, 1536, 1574
ScrFI CCNGG 2 cut(s) 183, 1358
SduI GDGCHC 8 cut(s) 78, 225, 372, 488, 793, 907, 1162, 1406
SfaNI GCATC 1 cut(s) 1732
SfcI CTRYAG 2 cut(s) 1212, 1434
SfuI TTCGAA 1 cut(s) 387
SinI GGWCC 4 cut(s) 83, 633, 746, 1446
SmiMI CAYNNNNRTG 1 cut(s) 1113
SmlI CTYRAG 1 cut(s) 714
SmoI CTYRAG 1 cut(s) 714
SsiI CCGC 4 cut(s) 72, 174, 678, 815
SspI AATATT 1 cut(s) 1258
SspMI CTAG 6 cut(s) 47, 354, 1352, 1391, 1440, 1479
SstI GAGCTC 3 cut(s) 372, 907, 1162
StyD4I CCNGG 2 cut(s) 181, 1356
StyI CCWWGG 5 cut(s) 118, 570, 976, 1297, 1449
TaaI ACNGT 7 cut(s) 43, 220, 441, 802, 823, 994, 1049
TaiI ACGT 1 cut(s) 655
TaqI TCGA 7 cut(s) 106, 145, 366, 387, 955, 1044, 1684
TatI WGTACW 3 cut(s) 828, 996, 1173
TauI GCSGC 1 cut(s) 818
TfiI GAWTC 6 cut(s) 135, 530, 542, 1149, 1314, 1647
Tru1I TTAA 6 cut(s) 261, 909, 1077, 1566, 1674, 1825
Tru9I TTAA 6 cut(s) 261, 909, 1077, 1566, 1674, 1825
TseFI GTSAC 3 cut(s) 37, 1304, 1778
TseI GCWGC 2 cut(s) 610, 1534
Tsp45I GTSAC 3 cut(s) 37, 1304, 1778
TspDTI ATGAA 8 cut(s) 462, 796, 1063, 1071, 1095, 1141, 1179, 1760
TspGWI ACGGA 1 cut(s) 421
VneI GTGCAC 1 cut(s) 789
VpaK11BI GGWCC 4 cut(s) 83, 633, 746, 1446
VspI ATTAAT 1 cut(s) 1077
XapI RAATTY 3 cut(s) 389, 1198, 1561
XbaI TCTAGA 1 cut(s) 46
XceI RCATGY 1 cut(s) 678
XcmI CCANNNNNNNNNTGG 2 cut(s) 553, 983
XmnI GAANNNNTTC 2 cut(s) 1009, 1290
XspI CTAG 6 cut(s) 47, 354, 1352, 1391, 1440, 1479
ZrmI AGTACT 1 cut(s) 1175
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.