Rmu_sc0013038.1_g000011

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0013038.1
OG0000107
Physical Location & Seq
Forward (+)
53869 .. 56889
3021 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0013038.1_g000011.1.cds

Sequence Viewer

Length: 1716 bp
atgactttcttcaaagtaactgtagcgtgtacagaagtcagctgtgggtttaatggcctggctattgatctcccattccgcaggggagatgatgagcaccgaattgttctaggaaaattccttgtcaaacacatagattatatccgtcaggaaatccaactaagtaccccagactgccttctactaacttctttagacaactcctacatggacttgccaagctctccgttctacgcagacgaaactgttaaccttaccctattccgttgtcctgttcaaagagttgtagataatgcacgactagtcccctgccttggtaactacgcagcttatgccgttgaatctttcgcatcccctcgggattaccctgccctagagtcgtgtacaaagatgtatgatttatcacttctacacggcaatgactacgcagcttcctcagagcctcgtcttagatggtataaaccaaactgttcagagtgcaaagcaatgggaaacaagtgtagattgaagaacaatggcattcaaagtgaaattgaatgctttcaccccaggaaaccaagtgcaacaccgaaattagtcgcatcaggttcgactctgggttcatttcttatcctactgctggcgtttaaagcctatcgtttctatacatgggatagaaatgaaaaggaacatcaattgaaagttgaaaagtttctagaggattacaaaaatttgaaaccaagtagatattcttatgcagatattaagagaattacaaatgaattcagggacatgttgggtgaaggagcctatggaactgtctttaaaggaaatctttccactgaattttttgtggctgtcaaagtcctcaacaattctaaaggaaatggagaagaattcatcaatgaagttggagcaatgggtcgtatccaccatgttaacgtggttcgcttggttggcttttgcgccgatgggtttaaaagagctcttgtttatgagtacttccccaatggttccctacaagatttcatttcatcagcagataacaagaacaattttcttggttgggataagctgcaaaatatttctctgggaatagccaaaggaattgaatatctccatgaaggatgcgatcaaagaatcctccattttgatatcaaacctcgtaatgttttgttagaccagaacttcactccaaaaatttctgattttggtctggccaagttatgttctaaggatcaaagtattgtgtcaatgactacagctaggggcacaatgggctacattgcacctgaagtattttcgaggaattttggaaatgtgtcttacaagtcagatgtgtatggttttggaatgttgttgttggagatcgtaggagggaggaagaatattggtccaaccatggacgacaacgctagtgatgtttattacccagagtggatctataatcttctagaagaaggagaagacctacgagtacgtattggggaagaaggatcaggtgctggaattgcaaagcaactagcaattgtagggctttggtgcattcaatggcacccggtggatcgtccatccatgaaagtagtagttcaaatgttagaaggaagagagaacttaaccatgccgcctaatccttttggctctacaaattctacgagaacaaatgcaagtctgccagccttaagacgcttgaacctcgaattagatgcaattgttgaattggagttagacgcttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase

Protein Analysis

571

Amino Acids

64.29

Weight (kDa)

6.13

Isoelectric Point (pI)

39.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1533
AciI CCGC 2 cut(s) 79, 1604
AclWI GGATC 4 cut(s) 1224, 1427, 1483, 1551
AcoI YGGCCR 1 cut(s) 1197
AcsI RAATTY 8 cut(s) 116, 709, 761, 824, 875, 1179, 1288, 1627
AcuI CTGAAG 1 cut(s) 1293
AdeI CACNNNGTG 1 cut(s) 1540
AfaI GTAC 5 cut(s) 31, 166, 385, 980, 1458
AfiI CCNNNNNNNGG 2 cut(s) 314, 619
AflII CTTAAG 1 cut(s) 1660
AflIII ACRYGT 1 cut(s) 771
AhlI ACTAGT 1 cut(s) 301
AjnI CCWGG 2 cut(s) 57, 548
AjuI GAANNNNNNNTTGG 2 cut(s) 712, 744
AluBI AGCT 7 cut(s) 42, 222, 329, 431, 965, 1054, 1244
AluI AGCT 7 cut(s) 42, 222, 329, 431, 965, 1054, 1244
Alw21I GWGCWC 2 cut(s) 99, 967
AlwI GGATC 4 cut(s) 1224, 1427, 1483, 1551
AlwNI CAGNNNCTG 1 cut(s) 1484
Ama87I CYCGRG 1 cut(s) 357
AoxI GGCC 2 cut(s) 55, 1197
ApeKI GCWGC 3 cut(s) 326, 428, 1054
ApoI RAATTY 8 cut(s) 116, 709, 761, 824, 875, 1179, 1288, 1627
Asp700I GAANNNNTTC 3 cut(s) 540, 690, 814
AspLEI GCGC 1 cut(s) 947
AspS9I GGNCC 1 cut(s) 1373
AsuC2I CCSGG 1 cut(s) 1538
AsuHPI GGTGA 2 cut(s) 536, 791
AvaI CYCGRG 1 cut(s) 357
AvaII GGWCC 1 cut(s) 1373
BaeGI GKGCMC 1 cut(s) 1253
BalI TGGCCA 1 cut(s) 1199
BanI GGYRCC 1 cut(s) 1533
BanII GRGCYC 1 cut(s) 967
BbsI GAAGAC 1 cut(s) 1452
Bbv12I GWGCWC 2 cut(s) 99, 967
BbvI GCAGC 3 cut(s) 338, 440, 1041
BccI CCATC 3 cut(s) 447, 944, 1558
BceAI ACGGC 2 cut(s) 320, 430
BcgI CGANNNNNNTGC 4 cut(s) 570, 604, 1667, 1701
BciT130I CCWGG 2 cut(s) 59, 550
BciVI GTATCC 1 cut(s) 917
BcnI CCSGG 1 cut(s) 1538
BcuI ACTAGT 1 cut(s) 301
BfaI CTAG 8 cut(s) 110, 302, 374, 695, 1245, 1395, 1433, 1502
BfmI CTRYAG 2 cut(s) 21, 1239
BfrI CTTAAG 1 cut(s) 1660
BfuI GTATCC 1 cut(s) 917
BisI GCNGC 4 cut(s) 327, 429, 1055, 1604
BlsI GCNGC 4 cut(s) 328, 430, 1056, 1605
BmcAI AGTACT 1 cut(s) 980
Bme1390I CCNGG 3 cut(s) 59, 550, 1538
Bme18I GGWCC 1 cut(s) 1373
BmeT110I CYCGRG 1 cut(s) 357
BmgT120I GGNCC 1 cut(s) 1373
BmiI GGNNCC 3 cut(s) 787, 994, 1535
BmrFI CCNGG 3 cut(s) 59, 550, 1538
BmsI GCATC 4 cut(s) 359, 590, 1097, 1675
BpiI GAAGAC 1 cut(s) 1452
BpuMI CCSGG 1 cut(s) 1538
BsaAI YACGTR 1 cut(s) 1460
BsaJI CCNNGG 4 cut(s) 313, 356, 548, 1380
Bsc4I CCNNNNNNNGG 2 cut(s) 314, 619
Bse3DI GCAATG 4 cut(s) 424, 492, 903, 1263
BseBI CCWGG 2 cut(s) 59, 550
BseDI CCNNGG 4 cut(s) 313, 356, 548, 1380
BseGI GGATG 3 cut(s) 350, 1112, 1550
BseLI CCNNNNNNNGG 2 cut(s) 314, 619
BseMI GCAATG 4 cut(s) 424, 492, 903, 1263
BseMII CTCAG 1 cut(s) 450
BseSI GKGCMC 1 cut(s) 1253
BseXI GCAGC 3 cut(s) 338, 440, 1041
BshFI GGCC 2 cut(s) 57, 1199
BshNI GGYRCC 1 cut(s) 1533
BsiHKAI GWGCWC 2 cut(s) 99, 967
BsiHKCI CYCGRG 1 cut(s) 357
BsiSI CCGG 1 cut(s) 1538
BslFI GGGAC 2 cut(s) 290, 782
BslI CCNNNNNNNGG 2 cut(s) 314, 619
BsmFI GGGAC 2 cut(s) 290, 782
BsmI GAATGC 3 cut(s) 519, 542, 1524
BsnI GGCC 2 cut(s) 57, 1199
BsoBI CYCGRG 1 cut(s) 357
Bsp1286I GDGCHC 3 cut(s) 99, 967, 1253
Bsp1407I TGTACA 2 cut(s) 29, 383
Bsp143I GATC 7 cut(s) 67, 1111, 1216, 1347, 1419, 1475, 1543
Bsp19I CCATGG 1 cut(s) 1380
BspACI CCGC 2 cut(s) 79, 1604
BspANI GGCC 2 cut(s) 57, 1199
BspCNI CTCAG 1 cut(s) 449
BspLI GGNNCC 3 cut(s) 787, 994, 1535
BspPI GGATC 4 cut(s) 1224, 1427, 1483, 1551
BspT107I GGYRCC 1 cut(s) 1533
BspTI CTTAAG 1 cut(s) 1660
BsrDI GCAATG 4 cut(s) 424, 492, 903, 1263
BsrGI TGTACA 2 cut(s) 29, 383
BssECI CCNNGG 4 cut(s) 313, 356, 548, 1380
BssMI GATC 7 cut(s) 67, 1111, 1216, 1347, 1419, 1475, 1543
BssT1I CCWWGG 2 cut(s) 313, 1380
Bst2UI CCWGG 2 cut(s) 59, 550
Bst4CI ACNGT 4 cut(s) 22, 247, 470, 799
Bst6I CTCTTC 1 cut(s) 1579
BstAFI CTTAAG 1 cut(s) 1660
BstAPI GCANNNNNTGC 1 cut(s) 332
BstAUI TGTACA 2 cut(s) 29, 383
BstBAI YACGTR 1 cut(s) 1460
BstC8I GCNNGC 2 cut(s) 621, 1656
BstDEI CTNAG 4 cut(s) 161, 436, 449, 1212
BstDSI CCRYGG 1 cut(s) 1380
BstF5I GGATG 3 cut(s) 350, 1112, 1550
BstHHI GCGC 1 cut(s) 947
BstKTI GATC 7 cut(s) 70, 1114, 1219, 1350, 1422, 1478, 1546
BstMBI GATC 7 cut(s) 67, 1111, 1216, 1347, 1419, 1475, 1543
BstMWI GCNNNNNNNGC 5 cut(s) 332, 629, 936, 1257, 1490
BstNI CCWGG 2 cut(s) 59, 550
BstNSI RCATGY 1 cut(s) 775
BstSCI CCNGG 3 cut(s) 57, 548, 1536
BstSFI CTRYAG 2 cut(s) 21, 1239
BstSLI GKGCMC 1 cut(s) 1253
BstSNI TACGTA 1 cut(s) 1460
BstV1I GCAGC 3 cut(s) 338, 440, 1041
BstV2I GAAGAC 1 cut(s) 1452
BstX2I RGATCY 1 cut(s) 1419
BstYI RGATCY 1 cut(s) 1419
BsuI GTATCC 1 cut(s) 917
BsuRI GGCC 2 cut(s) 57, 1199
BtgI CCRYGG 1 cut(s) 1380
BtsCI GGATG 3 cut(s) 350, 1112, 1550
BtsIMutI CAGTG 1 cut(s) 819
Cac8I GCNNGC 2 cut(s) 621, 1656
CaiI CAGNNNCTG 1 cut(s) 1484
CfoI GCGC 1 cut(s) 947
Cfr13I GGNCC 1 cut(s) 1373
CseI GACGC 1 cut(s) 1674
Csp6I GTAC 5 cut(s) 30, 165, 384, 979, 1457
CviAII CATG 8 cut(s) 208, 648, 772, 914, 1100, 1381, 1555, 1600
CviQI GTAC 5 cut(s) 30, 165, 384, 979, 1457
DdeI CTNAG 4 cut(s) 161, 436, 449, 1212
DpnI GATC 7 cut(s) 69, 1113, 1218, 1349, 1421, 1477, 1545
DpnII GATC 7 cut(s) 67, 1111, 1216, 1347, 1419, 1475, 1543
DraI TTTAAA 3 cut(s) 628, 805, 958
DraIII CACNNNGTG 1 cut(s) 1540
EaeI YGGCCR 1 cut(s) 1197
Eam1104I CTCTTC 1 cut(s) 1579
EarI CTCTTC 1 cut(s) 1579
Ecl136II GAGCTC 1 cut(s) 965
Eco105I TACGTA 1 cut(s) 1460
Eco130I CCWWGG 2 cut(s) 313, 1380
Eco24I GRGCYC 1 cut(s) 967
Eco32I GATATC 1 cut(s) 1135
Eco47I GGWCC 1 cut(s) 1373
Eco53kI GAGCTC 1 cut(s) 965
Eco57I CTGAAG 1 cut(s) 1293
Eco88I CYCGRG 1 cut(s) 357
EcoICRI GAGCTC 1 cut(s) 965
EcoRI GAATTC 2 cut(s) 761, 875
EcoRII CCWGG 2 cut(s) 57, 548
EcoRV GATATC 1 cut(s) 1135
EcoT14I CCWWGG 2 cut(s) 313, 1380
EcoT38I GRGCYC 1 cut(s) 967
ErhI CCWWGG 2 cut(s) 313, 1380
FaeI CATG 8 cut(s) 211, 651, 775, 917, 1103, 1384, 1558, 1603
FalI AAGNNNNNCTT 2 cut(s) 798, 830
FaqI GGGAC 2 cut(s) 290, 782
FatI CATG 8 cut(s) 207, 647, 771, 913, 1099, 1380, 1554, 1599
Fnu4HI GCNGC 4 cut(s) 327, 429, 1055, 1604
FokI GGATG 3 cut(s) 337, 1119, 1537
FriOI GRGCYC 1 cut(s) 967
Fsp4HI GCNGC 4 cut(s) 327, 429, 1055, 1604
FspBI CTAG 8 cut(s) 110, 302, 374, 695, 1245, 1395, 1433, 1502
GlaI GCGC 1 cut(s) 946
GluI GCNGC 4 cut(s) 327, 429, 1055, 1604
HaeIII GGCC 2 cut(s) 57, 1199
HapII CCGG 1 cut(s) 1538
HgaI GACGC 1 cut(s) 1674
HhaI GCGC 1 cut(s) 947
Hin1II CATG 8 cut(s) 211, 651, 775, 917, 1103, 1384, 1558, 1603
Hin6I GCGC 1 cut(s) 945
HinP1I GCGC 1 cut(s) 945
HincII GTYRAC 2 cut(s) 250, 919
HindII GTYRAC 2 cut(s) 250, 919
HinfI GANTC 4 cut(s) 341, 377, 592, 1119
HpaI GTTAAC 2 cut(s) 250, 919
HpaII CCGG 1 cut(s) 1538
HphI GGTGA 2 cut(s) 536, 791
Hpy166II GTNNAC 4 cut(s) 30, 250, 384, 919
Hpy188I TCNGA 4 cut(s) 439, 475, 1186, 1315
Hpy188III TCNNGA 4 cut(s) 149, 359, 695, 1433
Hpy8I GTNNAC 4 cut(s) 30, 250, 384, 919
HpyAV CCTTC 6 cut(s) 188, 776, 1097, 1433, 1466, 1574
HpyCH4III ACNGT 4 cut(s) 22, 247, 470, 799
HpyCH4IV ACGT 2 cut(s) 921, 1459
HpyF10VI GCNNNNNNNGC 5 cut(s) 332, 629, 936, 1257, 1490
HpyF3I CTNAG 4 cut(s) 161, 436, 449, 1212
HpySE526I ACGT 2 cut(s) 921, 1459
Hsp92II CATG 8 cut(s) 211, 651, 775, 917, 1103, 1384, 1558, 1603
HspAI GCGC 1 cut(s) 945
KspAI GTTAAC 2 cut(s) 250, 919
Kzo9I GATC 7 cut(s) 67, 1111, 1216, 1347, 1419, 1475, 1543
LmnI GCTCC 2 cut(s) 785, 893
Lsp1109I GCAGC 3 cut(s) 338, 440, 1041
LweI GCATC 4 cut(s) 359, 590, 1097, 1675
MaeI CTAG 8 cut(s) 110, 302, 374, 695, 1245, 1395, 1433, 1502
MaeII ACGT 2 cut(s) 921, 1459
MaeIII GTNAC 2 cut(s) 16, 317
MalI GATC 7 cut(s) 69, 1113, 1218, 1349, 1421, 1477, 1545
MboI GATC 7 cut(s) 67, 1111, 1216, 1347, 1419, 1475, 1543
MboII GAAGA 8 cut(s) 520, 884, 1375, 1421, 1448, 1457, 1481, 1596
MfeI CAATTG 3 cut(s) 674, 1506, 1689
MflI RGATCY 1 cut(s) 1419
MhlI GDGCHC 3 cut(s) 99, 967, 1253
MlsI TGGCCA 1 cut(s) 1199
MluNI TGGCCA 1 cut(s) 1199
MlyI GAGTC 2 cut(s) 386, 586
MmeI TCCRAC 4 cut(s) 181, 871, 1323, 1400
Mox20I TGGCCA 1 cut(s) 1199
MroXI GAANNNNTTC 3 cut(s) 540, 690, 814
MscI TGGCCA 1 cut(s) 1199
MseI TTAA 9 cut(s) 51, 249, 627, 744, 804, 918, 957, 1595, 1661
MslI CAYNNNNRTG 1 cut(s) 417
Msp20I TGGCCA 1 cut(s) 1199
MspA1I CMGCKG 1 cut(s) 42
MspCI CTTAAG 1 cut(s) 1660
MspI CCGG 1 cut(s) 1538
MspR9I CCNGG 3 cut(s) 59, 550, 1538
MunI CAATTG 3 cut(s) 674, 1506, 1689
Mva1269I GAATGC 3 cut(s) 519, 542, 1524
MvaI CCWGG 2 cut(s) 59, 550
MwoI GCNNNNNNNGC 5 cut(s) 332, 629, 936, 1257, 1490
NciI CCSGG 1 cut(s) 1538
NcoI CCATGG 1 cut(s) 1380
NdeII GATC 7 cut(s) 67, 1111, 1216, 1347, 1419, 1475, 1543
NlaIII CATG 8 cut(s) 211, 651, 775, 917, 1103, 1384, 1558, 1603
NlaIV GGNNCC 3 cut(s) 787, 994, 1535
NspI RCATGY 1 cut(s) 775
PciI ACATGT 1 cut(s) 771
PctI GAATGC 3 cut(s) 519, 542, 1524
PdmI GAANNNNTTC 3 cut(s) 540, 690, 814
PfeI GAWTC 2 cut(s) 341, 1119
PkrI GCNGC 4 cut(s) 328, 430, 1056, 1605
PleI GAGTC 2 cut(s) 385, 586
PpsI GAGTC 2 cut(s) 385, 586
Ppu21I YACGTR 1 cut(s) 1460
PscI ACATGT 1 cut(s) 771
Psp124BI GAGCTC 1 cut(s) 967
Psp6I CCWGG 2 cut(s) 57, 548
PspGI CCWGG 2 cut(s) 57, 548
PspN4I GGNNCC 3 cut(s) 787, 994, 1535
PspPI GGNCC 1 cut(s) 1373
PstNI CAGNNNCTG 1 cut(s) 1484
PsuI RGATCY 1 cut(s) 1419
PvuII CAGCTG 1 cut(s) 42
RsaI GTAC 5 cut(s) 31, 166, 385, 980, 1458
RsaNI GTAC 5 cut(s) 30, 165, 384, 979, 1457
RseI CAYNNNNRTG 1 cut(s) 417
SacI GAGCTC 1 cut(s) 967
SaqAI TTAA 9 cut(s) 51, 249, 627, 744, 804, 918, 957, 1595, 1661
SatI GCNGC 4 cut(s) 327, 429, 1055, 1604
Sau3AI GATC 7 cut(s) 67, 1111, 1216, 1347, 1419, 1475, 1543
Sau96I GGNCC 1 cut(s) 1373
ScaI AGTACT 1 cut(s) 980
SchI GAGTC 2 cut(s) 386, 586
ScrFI CCNGG 3 cut(s) 59, 550, 1538
SduI GDGCHC 3 cut(s) 99, 967, 1253
SfaNI GCATC 4 cut(s) 359, 590, 1097, 1675
SfcI CTRYAG 2 cut(s) 21, 1239
SinI GGWCC 1 cut(s) 1373
SmiMI CAYNNNNRTG 1 cut(s) 417
SmlI CTYRAG 1 cut(s) 1660
SmoI CTYRAG 1 cut(s) 1660
SnaBI TACGTA 1 cut(s) 1460
SpeI ACTAGT 1 cut(s) 301
SsiI CCGC 2 cut(s) 79, 1604
SspI AATATT 2 cut(s) 1063, 1369
SspMI CTAG 8 cut(s) 110, 302, 374, 695, 1245, 1395, 1433, 1502
SstI GAGCTC 1 cut(s) 967
StyD4I CCNGG 3 cut(s) 57, 548, 1536
StyI CCWWGG 2 cut(s) 313, 1380
TaaI ACNGT 4 cut(s) 22, 247, 470, 799
TaiI ACGT 2 cut(s) 924, 1462
TaqI TCGA 3 cut(s) 590, 1283, 1677
TatI WGTACW 3 cut(s) 29, 383, 978
TauI GCSGC 1 cut(s) 1606
TfiI GAWTC 2 cut(s) 341, 1119
Tru1I TTAA 9 cut(s) 51, 249, 627, 744, 804, 918, 957, 1595, 1661
Tru9I TTAA 9 cut(s) 51, 249, 627, 744, 804, 918, 957, 1595, 1661
TscAI CASTG 1 cut(s) 826
TseI GCWGC 3 cut(s) 326, 428, 1054
TspDTI ATGAA 9 cut(s) 591, 675, 774, 868, 900, 997, 1002, 1116, 1571
TspGWI ACGGA 3 cut(s) 134, 216, 254
TspRI CASTG 1 cut(s) 826
Vha464I CTTAAG 1 cut(s) 1660
VpaK11BI GGWCC 1 cut(s) 1373
XapI RAATTY 8 cut(s) 116, 709, 761, 824, 875, 1179, 1288, 1627
XbaI TCTAGA 2 cut(s) 694, 1432
XceI RCATGY 1 cut(s) 775
XmnI GAANNNNTTC 3 cut(s) 540, 690, 814
XspI CTAG 8 cut(s) 110, 302, 374, 695, 1245, 1395, 1433, 1502
ZrmI AGTACT 1 cut(s) 980
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.