Rw1G010870

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Forward (+)
24611073 .. 24613320
2248 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G010870.1

Sequence Viewer

Length: 1788 bp
ATGCAGCAAATATTCATATCATCCTTTTGCTTATTCTCAATAATGACTTGCTTCGAAGTGATGGAAGCGTGTTCCAAATCCAAGTGTGGGGATAGTAGTCTGGCTATCCATCTTCCTTTCCACCGCGGACACCATTGTGGACCACAATACAGTGAGTGCAATGAGGCCACAGACGGTGATGAGCAGAAAATCTTACTAGTCAAATTCTTTGTCACACACATAGATTATATCAATCAGGAAGTCCAGGTGCATAACTCAGATAATTGCCTACTGCTAAATCCTTTAGACATCCCATACACCAACATGCCAAAGTCTCCCTTCGAGACCTTGCAATCTGAAAGGGGTAACATTACCTTATTCCGTTGTCCTGCTGAAACAGTTGTAACTTATTCTTATTCTTATGCACAACTCGTCCCCTGCCTTGGTGACACTGACTACAAAATTTATGCTATTTTTTCTGACACTGAAATTGGTGATTTGCCCGGCATAGAGTCTTGCACAAAGATGTATGATGTTTTATCACTTCCATATAATACTACATACAAGTACTCGACTCAAACTCTTCGTTTCAAATGGTCTACACCAAATTGTTCAGAATGTGAAGCAGTGGGCAACAAGTGTAGATTGAAGAACAGCCGCACCCAAAGTAAAATTGAATGTGTTCAGTTGAGGAAACCAAATTTGAAATCGAAATTAGTGGCAGCAGGTTCAACTCTGGGTTCATTTTTTGTCCTACTACTTGCCATTGCAATCCATCGTTTCTATACATGGAATAGAAATGAAAATGAACATCAATTCAAGGTTATAAGATTTTTAGAGGATTACAAAGCTCTCAAGCCAAGCAGATATTCTTATGCAGATATTAAGAGGATTACAAATGAATTCAAGGAAAAGCTGGGTGAAGGAGCCTATGGAACTGTTTTTAAAGGAAGTCTATCTTCTGAATTCTTTGTTGCTGTCAAAGTCCTAAATAATTCTAAGGGAAATGGGGAAGAGTTTGTCAATGAAGTGGGAGCAATGGGTCATATCCACCATGTCAACGTGGTTCGAATGGTTGGCTTTTTACTTCCCAATGGTTCATTACAAGATTTCATTTCCTCAGCAGACAATAAGAATGGTTTCCTTGGTTGGGATAAGTTGAAAGATATTTCTCTAGGAATAGCCAAAGGAATTGAATATCTCCACCAAGGATGTGATCAACGAATCCTCCATTTTGATATCAAACCTCATAATGTTTTGCTAGACCACAACTTCACTCCAAAAATTTCTGATTTTGGTTTGGCCAAGTTATGTTCCAAGGATCAAAGTATTGTGTCAATGACTACAGCTAGGGGCACAATGGGCTACATTGCTCCTGAAGTATTCTCCAGGAATTTTGGAAATGTGTCTTATAAGTCTGATGTCTATAGCTTCGGAATGTTGTTGCTGGAGATCGTTGGAGGTAGGAAGAATATTGGTCCCACCATTAATGATGCTAGTGACATTTACTATCCAGAGTGGATCTATAATCTCCTAGAAGGAGGACAAGACTTACGTATGGATATTGGCGAAGAAGGATCAGATTCTACAATTGCAAAAGAATTAGCGATTGTGGGACTTTGGTGCATACAATGGCACCCGGTGGATCGTCCATCCATGAAAGTAGTGGTTCATATGTTGGAAGGAAGAGAAAACTTAAGTATGCCGCCTAATCCTTTTGGCTCTACAGGTCCTACAAGAACAAATGCAAGTCTCCCAGCTTTGCGACGCTTGAACCTTGAGTTAGAAGCAATTGCTGAATTAGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

595

Amino Acids

66.94

Weight (kDa)

6.13

Isoelectric Point (pI)

37.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 294 - 552 2e-35 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 295 - 551 7.2e-37 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 806, 1392
Acc36I ACCTGC 1 cut(s) 695
AccB1I GGYRCC 1 cut(s) 1614
AccI GTMKAC 1 cut(s) 578
AccII CGCG 1 cut(s) 126
AciI CCGC 4 cut(s) 124, 126, 637, 1685
AclWI GGATC 4 cut(s) 1308, 1508, 1564, 1632
AcoI YGGCCR 1 cut(s) 1281
AcsI RAATTY 7 cut(s) 203, 441, 679, 881, 944, 1263, 1372
AcuI CTGAAG 1 cut(s) 1377
AdeI CACNNNGTG 1 cut(s) 1621
AfaI GTAC 1 cut(s) 548
AfiI CCNNNNNNNGG 3 cut(s) 87, 422, 1129
AflII CTTAAG 1 cut(s) 1675
AhlI ACTAGT 1 cut(s) 196
AjnI CCWGG 2 cut(s) 243, 1367
AjuI GAANNNNNNNTTGG 2 cut(s) 832, 864
AleI CACNNNNGTG 1 cut(s) 135
AluBI AGCT 5 cut(s) 830, 895, 1328, 1410, 1739
AluI AGCT 5 cut(s) 830, 895, 1328, 1410, 1739
Alw26I GTCTC 3 cut(s) 317, 318, 1736
AlwI GGATC 4 cut(s) 1308, 1508, 1564, 1632
AoxI GGCC 2 cut(s) 165, 1281
ApeKI GCWGC 2 cut(s) 4, 701
ApoI RAATTY 7 cut(s) 203, 441, 679, 881, 944, 1263, 1372
ArsI GACNNNNNNTTYG 2 cut(s) 195, 227
AseI ATTAAT 1 cut(s) 1467
Asp700I GAANNNNTTC 2 cut(s) 660, 1118
AspS9I GGNCC 3 cut(s) 140, 1457, 1709
AsuC2I CCSGG 2 cut(s) 483, 1619
AsuHPI GGTGA 4 cut(s) 188, 437, 485, 911
AsuII TTCGAA 2 cut(s) 54, 1048
AvaII GGWCC 3 cut(s) 140, 1457, 1709
BaeGI GKGCMC 1 cut(s) 1337
BalI TGGCCA 1 cut(s) 1283
BanI GGYRCC 1 cut(s) 1614
BbvCI CCTCAGC 1 cut(s) 1099
BbvI GCAGC 2 cut(s) 16, 713
BccI CCATC 4 cut(s) 55, 117, 762, 1639
BciT130I CCWGG 2 cut(s) 245, 1369
BclI TGATCA 1 cut(s) 1195
BcnI CCSGG 2 cut(s) 483, 1619
BcoDI GTCTC 3 cut(s) 317, 318, 1736
BcuI ACTAGT 1 cut(s) 196
BfaI CTAG 6 cut(s) 197, 1154, 1241, 1329, 1476, 1514
BfmI CTRYAG 3 cut(s) 1323, 1405, 1704
BfrI CTTAAG 1 cut(s) 1675
BfuAI ACCTGC 1 cut(s) 695
BisI GCNGC 4 cut(s) 5, 637, 702, 1685
BlsI GCNGC 4 cut(s) 6, 638, 703, 1686
BmcAI AGTACT 1 cut(s) 548
Bme1390I CCNGG 4 cut(s) 245, 483, 1369, 1619
Bme18I GGWCC 3 cut(s) 140, 1457, 1709
BmgT120I GGNCC 3 cut(s) 140, 1457, 1709
BmiI GGNNCC 3 cut(s) 907, 1459, 1616
BmrFI CCNGG 4 cut(s) 245, 483, 1369, 1619
BmsI GCATC 1 cut(s) 1462
BpmI CTGGAG 2 cut(s) 1351, 1448
Bpu10I CCTNAGC 1 cut(s) 1099
Bpu14I TTCGAA 2 cut(s) 54, 1048
BpuEI CTTGAG 2 cut(s) 818, 1778
BpuMI CCSGG 2 cut(s) 483, 1619
BsaAI YACGTR 1 cut(s) 1535
BsaI GGTCTC 1 cut(s) 317
BsaJI CCNNGG 5 cut(s) 124, 421, 1123, 1186, 1296
BsaXI ACNNNNNCTCC 2 cut(s) 1191, 1221
Bsc4I CCNNNNNNNGG 3 cut(s) 87, 422, 1129
Bse3DI GCAATG 4 cut(s) 166, 744, 1023, 1347
BseBI CCWGG 2 cut(s) 245, 1369
BseDI CCNNGG 5 cut(s) 124, 421, 1123, 1186, 1296
BseGI GGATG 4 cut(s) 20, 288, 1196, 1631
BseLI CCNNNNNNNGG 3 cut(s) 87, 422, 1129
BseMI GCAATG 4 cut(s) 166, 744, 1023, 1347
BseMII CTCAG 2 cut(s) 270, 1113
BseSI GKGCMC 1 cut(s) 1337
BseXI GCAGC 2 cut(s) 16, 713
BseYI CCCAGC 2 cut(s) 895, 1735
Bsh1236I CGCG 1 cut(s) 126
BshFI GGCC 2 cut(s) 167, 1283
BshNI GGYRCC 1 cut(s) 1614
BsiSI CCGG 2 cut(s) 483, 1619
BslFI GGGAC 3 cut(s) 398, 1443, 1608
BslI CCNNNNNNNGG 3 cut(s) 87, 422, 1129
BsmAI GTCTC 3 cut(s) 317, 318, 1736
BsmFI GGGAC 3 cut(s) 398, 1443, 1608
BsnI GGCC 2 cut(s) 167, 1283
Bso31I GGTCTC 1 cut(s) 317
Bsp119I TTCGAA 2 cut(s) 54, 1048
Bsp1286I GDGCHC 1 cut(s) 1337
Bsp143I GATC 6 cut(s) 1195, 1300, 1431, 1500, 1556, 1624
BspACI CCGC 4 cut(s) 124, 126, 637, 1685
BspANI GGCC 2 cut(s) 167, 1283
BspCNI CTCAG 2 cut(s) 269, 1112
BspFNI CGCG 1 cut(s) 126
BspLI GGNNCC 3 cut(s) 907, 1459, 1616
BspMI ACCTGC 1 cut(s) 695
BspPI GGATC 4 cut(s) 1308, 1508, 1564, 1632
BspT104I TTCGAA 2 cut(s) 54, 1048
BspT107I GGYRCC 1 cut(s) 1614
BspTI CTTAAG 1 cut(s) 1675
BspTNI GGTCTC 1 cut(s) 317
BsrDI GCAATG 4 cut(s) 166, 744, 1023, 1347
BssECI CCNNGG 5 cut(s) 124, 421, 1123, 1186, 1296
BssMI GATC 6 cut(s) 1195, 1300, 1431, 1500, 1556, 1624
BssT1I CCWWGG 4 cut(s) 421, 1123, 1186, 1296
Bst2UI CCWGG 2 cut(s) 245, 1369
Bst4CI ACNGT 4 cut(s) 152, 176, 379, 919
Bst6I CTCTTC 3 cut(s) 567, 987, 1660
BstAFI CTTAAG 1 cut(s) 1675
BstBAI YACGTR 1 cut(s) 1535
BstBI TTCGAA 2 cut(s) 54, 1048
BstDEI CTNAG 3 cut(s) 256, 978, 1099
BstDSI CCRYGG 1 cut(s) 124
BstF5I GGATG 4 cut(s) 20, 288, 1196, 1631
BstFNI CGCG 1 cut(s) 126
BstKTI GATC 6 cut(s) 1198, 1303, 1434, 1503, 1559, 1627
BstMAI GTCTC 3 cut(s) 317, 318, 1736
BstMBI GATC 6 cut(s) 1195, 1300, 1431, 1500, 1556, 1624
BstMWI GCNNNNNNNGC 1 cut(s) 1341
BstNI CCWGG 2 cut(s) 245, 1369
BstNSI RCATGY 1 cut(s) 307
BstSCI CCNGG 4 cut(s) 243, 481, 1367, 1617
BstSFI CTRYAG 3 cut(s) 1323, 1405, 1704
BstSLI GKGCMC 1 cut(s) 1337
BstSNI TACGTA 1 cut(s) 1535
BstUI CGCG 1 cut(s) 126
BstV1I GCAGC 2 cut(s) 16, 713
BstX2I RGATCY 1 cut(s) 1500
BstYI RGATCY 1 cut(s) 1500
BsuRI GGCC 2 cut(s) 167, 1283
BtgI CCRYGG 1 cut(s) 124
BtsCI GGATG 4 cut(s) 20, 288, 1196, 1631
BtsI GCAGTG 1 cut(s) 612
BtsIMutI CAGTG 4 cut(s) 157, 429, 462, 612
BveI ACCTGC 1 cut(s) 695
Cfr13I GGNCC 3 cut(s) 140, 1457, 1709
Cfr42I CCGCGG 1 cut(s) 127
CseI GACGC 1 cut(s) 1755
Csp6I GTAC 1 cut(s) 547
CviAII CATG 4 cut(s) 304, 768, 1034, 1636
CviQI GTAC 1 cut(s) 547
DdeI CTNAG 3 cut(s) 256, 978, 1099
DpnI GATC 6 cut(s) 1197, 1302, 1433, 1502, 1558, 1626
DpnII GATC 6 cut(s) 1195, 1300, 1431, 1500, 1556, 1624
DraI TTTAAA 1 cut(s) 925
DraIII CACNNNGTG 1 cut(s) 1621
EaeI YGGCCR 1 cut(s) 1281
Eam1104I CTCTTC 3 cut(s) 567, 987, 1660
EarI CTCTTC 3 cut(s) 567, 987, 1660
Eco105I TACGTA 1 cut(s) 1535
Eco130I CCWWGG 4 cut(s) 421, 1123, 1186, 1296
Eco31I GGTCTC 1 cut(s) 317
Eco32I GATATC 1 cut(s) 1219
Eco47I GGWCC 3 cut(s) 140, 1457, 1709
Eco57I CTGAAG 1 cut(s) 1377
EcoO109I RGGNCCY 1 cut(s) 1709
EcoRI GAATTC 2 cut(s) 881, 944
EcoRII CCWGG 2 cut(s) 243, 1367
EcoRV GATATC 1 cut(s) 1219
EcoT14I CCWWGG 4 cut(s) 421, 1123, 1186, 1296
ErhI CCWWGG 4 cut(s) 421, 1123, 1186, 1296
FaeI CATG 4 cut(s) 307, 771, 1037, 1639
FalI AAGNNNNNCTT 4 cut(s) 302, 334, 922, 954
FaqI GGGAC 3 cut(s) 398, 1443, 1608
FatI CATG 4 cut(s) 303, 767, 1033, 1635
FauNDI CATATG 1 cut(s) 1653
FbaI TGATCA 1 cut(s) 1195
FblI GTMKAC 1 cut(s) 578
Fnu4HI GCNGC 4 cut(s) 5, 637, 702, 1685
FokI GGATG 4 cut(s) 7, 275, 1203, 1618
Fsp4HI GCNGC 4 cut(s) 5, 637, 702, 1685
FspBI CTAG 6 cut(s) 197, 1154, 1241, 1329, 1476, 1514
GluI GCNGC 4 cut(s) 5, 637, 702, 1685
GsaI CCCAGC 2 cut(s) 899, 1739
GsuI CTGGAG 2 cut(s) 1351, 1448
HaeIII GGCC 2 cut(s) 167, 1283
HapII CCGG 2 cut(s) 483, 1619
HgaI GACGC 1 cut(s) 1755
Hin1II CATG 4 cut(s) 307, 771, 1037, 1639
HincII GTYRAC 1 cut(s) 1039
HindII GTYRAC 1 cut(s) 1039
HinfI GANTC 4 cut(s) 491, 553, 1203, 1562
HpaII CCGG 2 cut(s) 483, 1619
HphI GGTGA 4 cut(s) 188, 437, 485, 911
Hpy166II GTNNAC 3 cut(s) 140, 579, 1039
Hpy188I TCNGA 9 cut(s) 259, 337, 460, 595, 943, 1270, 1399, 1415, 1561
Hpy188III TCNNGA 4 cut(s) 236, 322, 1355, 1493
Hpy8I GTNNAC 3 cut(s) 140, 579, 1039
Hpy99I CGWCG 1 cut(s) 1749
HpyAV CCTTC 5 cut(s) 328, 896, 1511, 1547, 1655
HpyCH4III ACNGT 4 cut(s) 152, 176, 379, 919
HpyCH4IV ACGT 2 cut(s) 1041, 1534
HpyF10VI GCNNNNNNNGC 1 cut(s) 1341
HpyF3I CTNAG 3 cut(s) 256, 978, 1099
HpySE526I ACGT 2 cut(s) 1041, 1534
Hsp92II CATG 4 cut(s) 307, 771, 1037, 1639
Ksp22I TGATCA 1 cut(s) 1195
KspI CCGCGG 1 cut(s) 127
Kzo9I GATC 6 cut(s) 1195, 1300, 1431, 1500, 1556, 1624
LmnI GCTCC 3 cut(s) 905, 1013, 1357
Lsp1109I GCAGC 2 cut(s) 16, 713
LweI GCATC 1 cut(s) 1462
MaeI CTAG 6 cut(s) 197, 1154, 1241, 1329, 1476, 1514
MaeII ACGT 2 cut(s) 1041, 1534
MaeIII GTNAC 5 cut(s) 211, 344, 382, 425, 1478
MalI GATC 6 cut(s) 1197, 1302, 1433, 1502, 1558, 1626
MboI GATC 6 cut(s) 1195, 1300, 1431, 1500, 1556, 1624
MboII GAAGA 8 cut(s) 104, 554, 640, 930, 1004, 1459, 1562, 1677
MfeI CAATTG 2 cut(s) 1569, 1770
MflI RGATCY 1 cut(s) 1500
MhlI GDGCHC 1 cut(s) 1337
MlsI TGGCCA 1 cut(s) 1283
MluNI TGGCCA 1 cut(s) 1283
MlyI GAGTC 2 cut(s) 500, 547
MmeI TCCRAC 2 cut(s) 1417, 1638
MnlI CCTC 9 cut(s) 157, 663, 811, 861, 1108, 1217, 1236, 1433, 1514
Mox20I TGGCCA 1 cut(s) 1283
MroXI GAANNNNTTC 2 cut(s) 660, 1118
MscI TGGCCA 1 cut(s) 1283
MseI TTAA 4 cut(s) 864, 924, 1467, 1676
MslI CAYNNNNRTG 3 cut(s) 135, 302, 503
Msp20I TGGCCA 1 cut(s) 1283
MspA1I CMGCKG 1 cut(s) 126
MspCI CTTAAG 1 cut(s) 1675
MspI CCGG 2 cut(s) 483, 1619
MspR9I CCNGG 4 cut(s) 245, 483, 1369, 1619
MunI CAATTG 2 cut(s) 1569, 1770
MvaI CCWGG 2 cut(s) 245, 1369
MvnI CGCG 1 cut(s) 126
MwoI GCNNNNNNNGC 1 cut(s) 1341
NciI CCSGG 2 cut(s) 483, 1619
NdeI CATATG 1 cut(s) 1653
NdeII GATC 6 cut(s) 1195, 1300, 1431, 1500, 1556, 1624
NlaIII CATG 4 cut(s) 307, 771, 1037, 1639
NlaIV GGNNCC 3 cut(s) 907, 1459, 1616
NmuCI GTSAC 3 cut(s) 211, 425, 1478
NspI RCATGY 1 cut(s) 307
NspV TTCGAA 2 cut(s) 54, 1048
OliI CACNNNNGTG 1 cut(s) 135
PdmI GAANNNNTTC 2 cut(s) 660, 1118
PfeI GAWTC 2 cut(s) 1203, 1562
PfoI TCCNGGA 1 cut(s) 1367
PkrI GCNGC 4 cut(s) 6, 638, 703, 1686
PleI GAGTC 2 cut(s) 499, 547
PpsI GAGTC 2 cut(s) 499, 547
Ppu21I YACGTR 1 cut(s) 1535
PpuMI RGGWCCY 1 cut(s) 1709
PshBI ATTAAT 1 cut(s) 1467
PsiI TTATAA 2 cut(s) 806, 1392
Psp5II RGGWCCY 1 cut(s) 1709
Psp6I CCWGG 2 cut(s) 243, 1367
PspFI CCCAGC 2 cut(s) 895, 1735
PspGI CCWGG 2 cut(s) 243, 1367
PspN4I GGNNCC 3 cut(s) 907, 1459, 1616
PspPI GGNCC 3 cut(s) 140, 1457, 1709
PspPPI RGGWCCY 1 cut(s) 1709
PsuI RGATCY 1 cut(s) 1500
RsaI GTAC 1 cut(s) 548
RsaNI GTAC 1 cut(s) 547
RseI CAYNNNNRTG 3 cut(s) 135, 302, 503
SacII CCGCGG 1 cut(s) 127
SaqAI TTAA 4 cut(s) 864, 924, 1467, 1676
SatI GCNGC 4 cut(s) 5, 637, 702, 1685
Sau3AI GATC 6 cut(s) 1195, 1300, 1431, 1500, 1556, 1624
Sau96I GGNCC 3 cut(s) 140, 1457, 1709
ScaI AGTACT 1 cut(s) 548
SchI GAGTC 2 cut(s) 500, 547
ScrFI CCNGG 4 cut(s) 245, 483, 1369, 1619
SduI GDGCHC 1 cut(s) 1337
SfaNI GCATC 1 cut(s) 1462
SfcI CTRYAG 3 cut(s) 1323, 1405, 1704
Sfr303I CCGCGG 1 cut(s) 127
SfuI TTCGAA 2 cut(s) 54, 1048
SgrBI CCGCGG 1 cut(s) 127
SinI GGWCC 3 cut(s) 140, 1457, 1709
SmiMI CAYNNNNRTG 3 cut(s) 135, 302, 503
SmlI CTYRAG 3 cut(s) 833, 1675, 1757
SmoI CTYRAG 3 cut(s) 833, 1675, 1757
SnaBI TACGTA 1 cut(s) 1535
SpeI ACTAGT 1 cut(s) 196
SsiI CCGC 4 cut(s) 124, 126, 637, 1685
SspI AATATT 2 cut(s) 12, 1453
SspMI CTAG 6 cut(s) 197, 1154, 1241, 1329, 1476, 1514
StyD4I CCNGG 4 cut(s) 243, 481, 1367, 1617
StyI CCWWGG 4 cut(s) 421, 1123, 1186, 1296
TaaI ACNGT 4 cut(s) 152, 176, 379, 919
TaiI ACGT 2 cut(s) 1044, 1537
TaqI TCGA 5 cut(s) 54, 321, 551, 689, 1048
TatI WGTACW 1 cut(s) 546
TauI GCSGC 2 cut(s) 639, 1687
TfiI GAWTC 2 cut(s) 1203, 1562
Tru1I TTAA 4 cut(s) 864, 924, 1467, 1676
Tru9I TTAA 4 cut(s) 864, 924, 1467, 1676
TscAI CASTG 4 cut(s) 157, 436, 469, 612
TseFI GTSAC 3 cut(s) 211, 425, 1478
TseI GCWGC 2 cut(s) 4, 701
Tsp45I GTSAC 3 cut(s) 211, 425, 1478
TspGWI ACGGA 1 cut(s) 350
TspRI CASTG 4 cut(s) 157, 436, 469, 612
Vha464I CTTAAG 1 cut(s) 1675
VpaK11BI GGWCC 3 cut(s) 140, 1457, 1709
VspI ATTAAT 1 cut(s) 1467
XapI RAATTY 7 cut(s) 203, 441, 679, 881, 944, 1263, 1372
XceI RCATGY 1 cut(s) 307
XcmI CCANNNNNNNNNTGG 1 cut(s) 1642
XmiI GTMKAC 1 cut(s) 578
XmnI GAANNNNTTC 2 cut(s) 660, 1118
XspI CTAG 6 cut(s) 197, 1154, 1241, 1329, 1476, 1514
ZrmI AGTACT 1 cut(s) 548
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.