MD02G1251000.v1.1

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0000107
Physical Location & Seq
Forward (+)
30270057 .. 30272049
1993 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1251000.v1.1.491

Sequence Viewer

Length: 1806 bp
ATGTGCATTATTTTTATTATTATTATCTCAGAAATGCAGAAATTGATCATCTCTTCCTTCTGCATATTGATACTGGTTTTCTTCAAACTAGTTGAAGCAAGCCAATATGTGTGCGCGAAATCCAACTGTAGCAATGATCAACGCCCGGCTATCCATTTCCCATTGAACATCAGGCGCACACATCATTGTGGAAATTCTGGGCTTGAATGCAATGGGAGATATGGGCAGCAAATACTAATAAAATTATTTGTCAAACACATTGATTACAAGCGTCAGGAAATCCAAGTCTATTCCCCAAGTAACTGCCTGCTGCTAAAGCATGTTGAAATCCCAAACATGCCACCCTCTCCCTTCAACGTGTCAGTCGATGACTACATGAGTACCCTTACCTTATTCAGTTGTCCTACTTCTGTTGCAAGACGAGATACGTATCAAGTCCCCTGCCTCGGCGACCCTGGCAAGAAAACTTATGCCATTCGTTCTTACTATGATTTTGGAACTCTCTTCCAGAATCTACAATCCTGTACAAAAATGTATGATGTTTTATCAGTTCCAATAGCCTATGAATATTATGTTTTTCGTTTCAAATGGTCTATACCAAATTGCAGAAAATGTGGAGAGGGAAAGAAGTGTGGATGGCAGAACAATGAAATTAAATGTCTTCCCTGGAGGAAACCAAGCAACACATGGAAAAAAGTGGTTACAGGTGGAATCCTGTGTGCTTTGCTTCTTGTTCTACTGACGATTGCAGCATATCGGGTATATAGCGCTGATAGAAAGGAGAAAGAGAGTCGATTAAGAATTGAAAGATTCTTGGAGGACTACAAAGCACTCAAACCAAGCAGGTATTCGTACGCAGATATTAAGAGGATTACAAATCAATTCAAGGACAAGTTGGGCCAAGGAGCCTATGGAACTGTCTTCAAAGGAATGCTCTCTTCTGAATTTTTTATTGCTGTCAAAGTCCTCAACAGTTCCAAGGGAGATGGGGAAGAGTTCGTAAATGAAGTGCGAACGATGGGTCATATCCACCATTTAAACGTGGCTCGCTTGGTTGGATTTTGTGCTGATGGATTTGTACGAGCTCTTGTTTACGAGTTCTTCCCCAATGGTTCCCTGCAGGATTTCATTTCATCTGCAGATAGTAAGAATTCATTTCTTGGTTGGGATAAACTGCAAGATATTGCCCTAGGCATAGCCAAAGGAATTGAATATCTTCACCAGGGATGCGATCTACGAATCCTGCATTTCGACATCAAACCCCATAATGTTTTGCTAGACCAAAACTTCACTCCAAAAATTTCTGATTTTGGTATGGCCAAGTTATGTTCCAAGGATCAAAGCTTGGTGTCCATGACTACAGCTAGGGGGACCATGGGCTACATTGCACCTGAAGTGTTCTCCAGGAATTTCGGAAATGTGTCTTACAAGGCAGATGTCTATAGCTTTGGAATGCTGCTGCTTGAGATGGTAGGAGGAAGGAAGAATATTGGTTCAATCACGGATAACACTACAAATGAAATTTACTATCCACAGTGGATTTATAATCTTCTAGAGGAAGGGGATGACCTACGAATCCACATTGGGGAAGAAGGAGATGGTAAAATTCCAAAGAAACTTGCAATTATAGGGCTATGGTGTATCCAATGGCACCCGTCGGATCGTCCTTCCATGAAAATAGCGGTTCAGATGTTAGAAGGAGGAGGAGAAAGCTTGAGTATGCCGCCTAATCCCTTTGTGCCTACTGGTTCTACAACTAGGAATGCAAGACGCCTAGAGCTAGAAGCTATTGCTGAATTAGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase Pkinase_Tyr

Protein Analysis

602

Amino Acids

68.2

Weight (kDa)

8.73

Isoelectric Point (pI)

41.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 294 - 563 4.3e-42 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 295 - 563 3.7e-45 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1545
Acc36I ACCTGC 1 cut(s) 834
AccB1I GGYRCC 1 cut(s) 1650
AccII CGCG 1 cut(s) 116
AciI CCGC 2 cut(s) 1682, 1724
AclWI GGATC 2 cut(s) 1344, 1668
AcoI YGGCCR 1 cut(s) 1317
AcsI RAATTY 7 cut(s) 193, 944, 1150, 1299, 1408, 1521, 1605
AcuI CTGAAG 1 cut(s) 1413
AcyI GRCGYC 1 cut(s) 1771
AfaI GTAC 4 cut(s) 382, 526, 854, 1080
AfeI AGCGCT 1 cut(s) 769
AfiI CCNNNNNNNGG 2 cut(s) 446, 1585
AflIII ACRYGT 1 cut(s) 357
AhlI ACTAGT 1 cut(s) 88
AjnI CCWGG 4 cut(s) 454, 665, 1221, 1403
AjuI GAANNNNNNNTTGG 2 cut(s) 832, 864
AluBI AGCT 7 cut(s) 1085, 1344, 1364, 1446, 1713, 1780, 1787
AluI AGCT 7 cut(s) 1085, 1344, 1364, 1446, 1713, 1780, 1787
Alw21I GWGCWC 1 cut(s) 1087
AlwI GGATC 2 cut(s) 1344, 1668
Aor51HI AGCGCT 1 cut(s) 769
AoxI GGCC 2 cut(s) 898, 1317
ApeKI GCWGC 5 cut(s) 226, 310, 749, 1456, 1459
ApoI RAATTY 7 cut(s) 193, 944, 1150, 1299, 1408, 1521, 1605
ArsI GACNNNNNNTTYG 2 cut(s) 1006, 1038
Asp700I GAANNNNTTC 1 cut(s) 1215
AspA2I CCTAGG 1 cut(s) 1189
AspLEI GCGC 3 cut(s) 116, 177, 770
AspS9I GGNCC 2 cut(s) 898, 1371
AsuC2I CCSGG 1 cut(s) 146
AsuHPI GGTGA 1 cut(s) 1211
AvaII GGWCC 1 cut(s) 1371
AvrII CCTAGG 1 cut(s) 1189
BaeI ACNNNNGTAYC 2 cut(s) 364, 397
BalI TGGCCA 1 cut(s) 1319
BanI GGYRCC 1 cut(s) 1650
BanII GRGCYC 1 cut(s) 1087
BbsI GAAGAC 2 cut(s) 653, 913
Bbv12I GWGCWC 1 cut(s) 1087
BbvI GCAGC 5 cut(s) 238, 297, 761, 1443, 1446
BccI CCATC 6 cut(s) 630, 980, 1012, 1064, 1462, 1592
BciT130I CCWGG 4 cut(s) 456, 667, 1223, 1405
BciVI GTATCC 1 cut(s) 1652
BclI TGATCA 2 cut(s) 45, 136
BcnI CCSGG 1 cut(s) 146
BcuI ACTAGT 1 cut(s) 88
BfaI CTAG 8 cut(s) 89, 1190, 1277, 1365, 1553, 1758, 1775, 1781
BfmI CTRYAG 5 cut(s) 127, 1118, 1137, 1359, 1441
BfoI RGCGCY 1 cut(s) 771
BfuAI ACCTGC 1 cut(s) 834
BfuI GTATCC 1 cut(s) 1652
BisI GCNGC 6 cut(s) 227, 311, 750, 1457, 1460, 1724
BlnI CCTAGG 1 cut(s) 1189
BlsI GCNGC 6 cut(s) 228, 312, 751, 1458, 1461, 1725
Bme1390I CCNGG 5 cut(s) 146, 456, 667, 1223, 1405
Bme18I GGWCC 1 cut(s) 1371
BmgT120I GGNCC 2 cut(s) 898, 1371
BmiI GGNNCC 4 cut(s) 907, 1114, 1372, 1652
BmrFI CCNGG 5 cut(s) 146, 456, 667, 1223, 1405
BmsI GCATC 1 cut(s) 1217
BpiI GAAGAC 2 cut(s) 653, 913
BpmI CTGGAG 2 cut(s) 688, 1387
BpuEI CTTGAG 2 cut(s) 1484, 1735
BpuMI CCSGG 1 cut(s) 146
BsaAI YACGTR 1 cut(s) 429
BsaBI GATNNNNATC 1 cut(s) 429
BsaHI GRCGYC 1 cut(s) 1771
BsaJI CCNNGG 9 cut(s) 445, 454, 665, 901, 978, 1189, 1222, 1332, 1374
Bsc4I CCNNNNNNNGG 2 cut(s) 446, 1585
Bse1I ACTGG 2 cut(s) 78, 1750
Bse3DI GCAATG 3 cut(s) 139, 217, 1383
Bse8I GATNNNNATC 1 cut(s) 429
BseBI CCWGG 4 cut(s) 456, 667, 1223, 1405
BseDI CCNNGG 9 cut(s) 445, 454, 665, 901, 978, 1189, 1222, 1332, 1374
BseGI GGATG 3 cut(s) 641, 1232, 1570
BseJI GATNNNNATC 1 cut(s) 429
BseLI CCNNNNNNNGG 2 cut(s) 446, 1585
BseMI GCAATG 3 cut(s) 139, 217, 1383
BseMII CTCAG 1 cut(s) 42
BseNI ACTGG 2 cut(s) 78, 1750
BseRI GAGGAG 2 cut(s) 1716, 1719
BseXI GCAGC 5 cut(s) 238, 297, 761, 1443, 1446
Bsh1236I CGCG 1 cut(s) 116
BshFI GGCC 2 cut(s) 900, 1319
BshNI GGYRCC 1 cut(s) 1650
BsiHKAI GWGCWC 1 cut(s) 1087
BsiSI CCGG 1 cut(s) 146
BsiWI CGTACG 1 cut(s) 852
BslFI GGGAC 2 cut(s) 422, 1384
BslI CCNNNNNNNGG 2 cut(s) 446, 1585
BsmFI GGGAC 2 cut(s) 422, 1384
BsmI GAATGC 4 cut(s) 212, 936, 1458, 1768
BsnI GGCC 2 cut(s) 900, 1319
Bsp1286I GDGCHC 1 cut(s) 1087
Bsp1407I TGTACA 1 cut(s) 524
Bsp143I GATC 5 cut(s) 45, 136, 1231, 1336, 1660
Bsp19I CCATGG 1 cut(s) 1374
BspACI CCGC 2 cut(s) 1682, 1724
BspANI GGCC 2 cut(s) 900, 1319
BspCNI CTCAG 1 cut(s) 41
BspFNI CGCG 1 cut(s) 116
BspLI GGNNCC 4 cut(s) 907, 1114, 1372, 1652
BspMAI CTGCAG 2 cut(s) 1122, 1141
BspMI ACCTGC 1 cut(s) 834
BspPI GGATC 2 cut(s) 1344, 1668
BspT107I GGYRCC 1 cut(s) 1650
BsrDI GCAATG 3 cut(s) 139, 217, 1383
BsrGI TGTACA 1 cut(s) 524
BsrI ACTGG 2 cut(s) 78, 1750
BssECI CCNNGG 9 cut(s) 445, 454, 665, 901, 978, 1189, 1222, 1332, 1374
BssMI GATC 5 cut(s) 45, 136, 1231, 1336, 1660
BssNI GRCGYC 1 cut(s) 1771
BssT1I CCWWGG 5 cut(s) 901, 978, 1189, 1332, 1374
Bst2UI CCWGG 4 cut(s) 456, 667, 1223, 1405
Bst4CI ACNGT 4 cut(s) 128, 919, 974, 1536
Bst6I CTCTTC 4 cut(s) 58, 509, 943, 987
BstACI GRCGYC 1 cut(s) 1771
BstAUI TGTACA 1 cut(s) 524
BstBAI YACGTR 1 cut(s) 429
BstC8I GCNNGC 3 cut(s) 100, 308, 1048
BstDEI CTNAG 1 cut(s) 28
BstDSI CCRYGG 1 cut(s) 1374
BstF5I GGATG 3 cut(s) 641, 1232, 1570
BstFNI CGCG 1 cut(s) 116
BstH2I RGCGCY 1 cut(s) 771
BstHHI GCGC 3 cut(s) 116, 177, 770
BstKTI GATC 5 cut(s) 48, 139, 1234, 1339, 1663
BstMBI GATC 5 cut(s) 45, 136, 1231, 1336, 1660
BstMWI GCNNNNNNNGC 2 cut(s) 316, 456
BstNI CCWGG 4 cut(s) 456, 667, 1223, 1405
BstNSI RCATGY 2 cut(s) 323, 340
BstSCI CCNGG 5 cut(s) 144, 454, 665, 1221, 1403
BstSFI CTRYAG 5 cut(s) 127, 1118, 1137, 1359, 1441
BstSNI TACGTA 1 cut(s) 429
BstUI CGCG 1 cut(s) 116
BstV1I GCAGC 5 cut(s) 238, 297, 761, 1443, 1446
BstV2I GAAGAC 2 cut(s) 653, 913
BsuI GTATCC 1 cut(s) 1652
BsuRI GGCC 2 cut(s) 900, 1319
BtgI CCRYGG 1 cut(s) 1374
BtsCI GGATG 3 cut(s) 641, 1232, 1570
BtsIMutI CAGTG 1 cut(s) 1541
BveI ACCTGC 1 cut(s) 834
Cac8I GCNNGC 3 cut(s) 100, 308, 1048
CfoI GCGC 3 cut(s) 116, 177, 770
Cfr13I GGNCC 2 cut(s) 898, 1371
CseI GACGC 2 cut(s) 260, 1779
Csp6I GTAC 4 cut(s) 381, 525, 853, 1079
CviAII CATG 7 cut(s) 320, 337, 376, 687, 1354, 1375, 1672
CviQI GTAC 4 cut(s) 381, 525, 853, 1079
DdeI CTNAG 1 cut(s) 28
DpnI GATC 5 cut(s) 47, 138, 1233, 1338, 1662
DpnII GATC 5 cut(s) 45, 136, 1231, 1336, 1660
DraI TTTAAA 1 cut(s) 1038
EaeI YGGCCR 1 cut(s) 1317
Eam1104I CTCTTC 4 cut(s) 58, 509, 943, 987
EarI CTCTTC 4 cut(s) 58, 509, 943, 987
Ecl136II GAGCTC 1 cut(s) 1085
Eco105I TACGTA 1 cut(s) 429
Eco130I CCWWGG 5 cut(s) 901, 978, 1189, 1332, 1374
Eco24I GRGCYC 1 cut(s) 1087
Eco47I GGWCC 1 cut(s) 1371
Eco47III AGCGCT 1 cut(s) 769
Eco53kI GAGCTC 1 cut(s) 1085
Eco57I CTGAAG 1 cut(s) 1413
EcoICRI GAGCTC 1 cut(s) 1085
EcoRI GAATTC 1 cut(s) 1150
EcoRII CCWGG 4 cut(s) 454, 665, 1221, 1403
EcoT14I CCWWGG 5 cut(s) 901, 978, 1189, 1332, 1374
EcoT38I GRGCYC 1 cut(s) 1087
ErhI CCWWGG 5 cut(s) 901, 978, 1189, 1332, 1374
FaeI CATG 7 cut(s) 323, 340, 379, 690, 1357, 1378, 1675
FaqI GGGAC 2 cut(s) 422, 1384
FatI CATG 7 cut(s) 319, 336, 375, 686, 1353, 1374, 1671
FbaI TGATCA 2 cut(s) 45, 136
Fnu4HI GCNGC 6 cut(s) 227, 311, 750, 1457, 1460, 1724
FokI GGATG 3 cut(s) 648, 1239, 1577
FriOI GRGCYC 1 cut(s) 1087
Fsp4HI GCNGC 6 cut(s) 227, 311, 750, 1457, 1460, 1724
FspBI CTAG 8 cut(s) 89, 1190, 1277, 1365, 1553, 1758, 1775, 1781
GlaI GCGC 3 cut(s) 115, 176, 769
GluI GCNGC 6 cut(s) 227, 311, 750, 1457, 1460, 1724
GsuI CTGGAG 2 cut(s) 688, 1387
HaeII RGCGCY 1 cut(s) 771
HaeIII GGCC 2 cut(s) 900, 1319
HapII CCGG 1 cut(s) 146
HgaI GACGC 2 cut(s) 260, 1779
HhaI GCGC 3 cut(s) 116, 177, 770
Hin1I GRCGYC 1 cut(s) 1771
Hin1II CATG 7 cut(s) 323, 340, 379, 690, 1357, 1378, 1675
Hin6I GCGC 3 cut(s) 114, 175, 768
HinP1I GCGC 3 cut(s) 114, 175, 768
HindIII AAGCTT 2 cut(s) 1342, 1711
HinfI GANTC 6 cut(s) 511, 711, 790, 810, 1239, 1575
HpaII CCGG 1 cut(s) 146
HphI GGTGA 1 cut(s) 1211
Hpy166II GTNNAC 1 cut(s) 1093
Hpy188I TCNGA 6 cut(s) 31, 943, 1306, 1415, 1660, 1689
Hpy188III TCNNGA 3 cut(s) 275, 508, 1553
Hpy8I GTNNAC 1 cut(s) 1093
Hpy99I CGWCG 1 cut(s) 1660
HpyAV CCTTC 7 cut(s) 67, 361, 1473, 1553, 1586, 1677, 1691
HpyCH4III ACNGT 4 cut(s) 128, 919, 974, 1536
HpyCH4IV ACGT 3 cut(s) 357, 428, 1041
HpyF10VI GCNNNNNNNGC 2 cut(s) 316, 456
HpyF3I CTNAG 1 cut(s) 28
HpySE526I ACGT 3 cut(s) 357, 428, 1041
Hsp92I GRCGYC 1 cut(s) 1771
Hsp92II CATG 7 cut(s) 323, 340, 379, 690, 1357, 1378, 1675
HspAI GCGC 3 cut(s) 114, 175, 768
Ksp22I TGATCA 2 cut(s) 45, 136
Kzo9I GATC 5 cut(s) 45, 136, 1231, 1336, 1660
LmnI GCTCC 1 cut(s) 905
Lsp1109I GCAGC 5 cut(s) 238, 297, 761, 1443, 1446
LweI GCATC 1 cut(s) 1217
MaeI CTAG 8 cut(s) 89, 1190, 1277, 1365, 1553, 1758, 1775, 1781
MaeII ACGT 3 cut(s) 357, 428, 1041
MaeIII GTNAC 2 cut(s) 299, 700
MalI GATC 5 cut(s) 47, 138, 1233, 1338, 1662
MboI GATC 5 cut(s) 45, 136, 1231, 1336, 1660
MhlI GDGCHC 1 cut(s) 1087
MlsI TGGCCA 1 cut(s) 1319
MluNI TGGCCA 1 cut(s) 1319
MlyI GAGTC 1 cut(s) 799
MmeI TCCRAC 3 cut(s) 147, 1036, 1638
Mox20I TGGCCA 1 cut(s) 1319
MroXI GAANNNNTTC 1 cut(s) 1215
MscI TGGCCA 1 cut(s) 1319
MseI TTAA 4 cut(s) 654, 797, 864, 1037
MslI CAYNNNNRTG 1 cut(s) 186
Msp20I TGGCCA 1 cut(s) 1319
MspI CCGG 1 cut(s) 146
MspR9I CCNGG 5 cut(s) 146, 456, 667, 1223, 1405
Mva1269I GAATGC 4 cut(s) 212, 936, 1458, 1768
MvaI CCWGG 4 cut(s) 456, 667, 1223, 1405
MvnI CGCG 1 cut(s) 116
MwoI GCNNNNNNNGC 2 cut(s) 316, 456
NciI CCSGG 1 cut(s) 146
NcoI CCATGG 1 cut(s) 1374
NdeII GATC 5 cut(s) 45, 136, 1231, 1336, 1660
NlaIII CATG 7 cut(s) 323, 340, 379, 690, 1357, 1378, 1675
NlaIV GGNNCC 4 cut(s) 907, 1114, 1372, 1652
NmeAIII GCCGAG 1 cut(s) 426
NspI RCATGY 2 cut(s) 323, 340
PcsI WCGNNNNNNNCGW 1 cut(s) 363
PctI GAATGC 4 cut(s) 212, 936, 1458, 1768
PdmI GAANNNNTTC 1 cut(s) 1215
PfeI GAWTC 5 cut(s) 511, 711, 810, 1239, 1575
Pfl23II CGTACG 1 cut(s) 852
PfoI TCCNGGA 1 cut(s) 1403
PkrI GCNGC 6 cut(s) 228, 312, 751, 1458, 1461, 1725
PleI GAGTC 1 cut(s) 798
PpsI GAGTC 1 cut(s) 798
Ppu21I YACGTR 1 cut(s) 429
PsiI TTATAA 1 cut(s) 1545
Psp124BI GAGCTC 1 cut(s) 1087
Psp6I CCWGG 4 cut(s) 454, 665, 1221, 1403
PspGI CCWGG 4 cut(s) 454, 665, 1221, 1403
PspLI CGTACG 1 cut(s) 852
PspN4I GGNNCC 4 cut(s) 907, 1114, 1372, 1652
PspPI GGNCC 2 cut(s) 898, 1371
PstI CTGCAG 2 cut(s) 1122, 1141
RsaI GTAC 4 cut(s) 382, 526, 854, 1080
RsaNI GTAC 4 cut(s) 381, 525, 853, 1079
RseI CAYNNNNRTG 1 cut(s) 186
SacI GAGCTC 1 cut(s) 1087
SaqAI TTAA 4 cut(s) 654, 797, 864, 1037
SatI GCNGC 6 cut(s) 227, 311, 750, 1457, 1460, 1724
Sau3AI GATC 5 cut(s) 45, 136, 1231, 1336, 1660
Sau96I GGNCC 2 cut(s) 898, 1371
SbfI CCTGCAGG 1 cut(s) 1122
SchI GAGTC 1 cut(s) 799
ScrFI CCNGG 5 cut(s) 146, 456, 667, 1223, 1405
SdaI CCTGCAGG 1 cut(s) 1122
SduI GDGCHC 1 cut(s) 1087
SfaNI GCATC 1 cut(s) 1217
SfcI CTRYAG 5 cut(s) 127, 1118, 1137, 1359, 1441
SinI GGWCC 1 cut(s) 1371
SmiMI CAYNNNNRTG 1 cut(s) 186
SmlI CTYRAG 2 cut(s) 1463, 1714
SmoI CTYRAG 2 cut(s) 1463, 1714
SnaBI TACGTA 1 cut(s) 429
SpeI ACTAGT 1 cut(s) 88
Sse8387I CCTGCAGG 1 cut(s) 1122
SsiI CCGC 2 cut(s) 1682, 1724
SspI AATATT 2 cut(s) 569, 1489
SspMI CTAG 8 cut(s) 89, 1190, 1277, 1365, 1553, 1758, 1775, 1781
SstI GAGCTC 1 cut(s) 1087
StyD4I CCNGG 5 cut(s) 144, 454, 665, 1221, 1403
StyI CCWWGG 5 cut(s) 901, 978, 1189, 1332, 1374
TaaI ACNGT 4 cut(s) 128, 919, 974, 1536
TaiI ACGT 3 cut(s) 360, 431, 1044
TaqI TCGA 3 cut(s) 366, 793, 1251
TatI WGTACW 1 cut(s) 524
TauI GCSGC 1 cut(s) 1726
TfiI GAWTC 5 cut(s) 511, 711, 810, 1239, 1575
Tru1I TTAA 4 cut(s) 654, 797, 864, 1037
Tru9I TTAA 4 cut(s) 654, 797, 864, 1037
TscAI CASTG 1 cut(s) 1541
TseI GCWGC 5 cut(s) 226, 310, 749, 1456, 1459
TspDTI ATGAA 8 cut(s) 579, 663, 1020, 1117, 1122, 1143, 1533, 1688
TspGWI ACGGA 1 cut(s) 1517
TspRI CASTG 1 cut(s) 1541
VpaK11BI GGWCC 1 cut(s) 1371
XapI RAATTY 7 cut(s) 193, 944, 1150, 1299, 1408, 1521, 1605
XbaI TCTAGA 1 cut(s) 1552
XceI RCATGY 2 cut(s) 323, 340
XcmI CCANNNNNNNNNTGG 2 cut(s) 684, 908
XmaJI CCTAGG 1 cut(s) 1189
XmnI GAANNNNTTC 1 cut(s) 1215
XspI CTAG 8 cut(s) 89, 1190, 1277, 1365, 1553, 1758, 1775, 1781
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.