MD02G1246100.v1.1

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0000107
Physical Location & Seq
Reverse (-)
29647020 .. 29649432
2413 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1246100.v1.1.491

Sequence Viewer

Length: 1833 bp
ATGCAGCAGCAACAGCTCAATATCTCTTGGGTTCGCATATTCTCAATTACTTTGTTAACATTGCTCGGAACAACCCAGAATGCCTCTGCTTGTGAAAAATCCAAATGCGGGGATCATGGCGAGGCCATCCATATTCTGTTTCGCCGTGGACATCCCTGTAGTCCGACATCTGATTGCCATGCGAATGAGGCTGACTACGGACAGGAGCACCGAGCGGTAGTGGTGAAATTCTTGGTGAAGCGCATAGATTACAAGCATCAGGAAGTCCAAGTCTATCACCCGCGTAAATGCCTGCTGTTAAAGCCTTTAGAAGTTGATAACATCAACATGTCATTGCCAGCCTCTCAATTCTACTTCCAAGAATCCATGCCTTCCAACGCTACCTTATTCCACTGTCCTGTTGAAAGAGAGTTAGACGGTGCTAAAGTCCCCTGCATTAGTGGCCCTGGCTACAGAGTTTATGCCATTGAATCTTCCTACGAAACTATGTACTATCCGCTCCTAGAGTCGTGTACAAAGATGTACGATGTTTTGTCGATTCCACAGATGTACTATTATTATAGTGAGGTTCCTAATTTGAAATGGAAGAAACCAAATTGTAGAGAGTGTGAGGCAGAGGGCAACAAGTGTAGAATCAAGTACAACCACACCAACACTGAAATTCAATGTGTTCGCTTGAGCAAACCTAGTGTAACATGGAAATTTGCCGCCGTAGGTGGTACAACCCTGGGATCATTTGTTGTATTACTTCTGCTGGTCGTTGCAGCCTATCGTGTCTATAGGTCTAATCGAAAAGAAAAGGAGAGTCAATTGAAGATTGAAAAGTTTTTAGAAGATTACAACGCTCAGAAACCAAGCAGGTATTCCTATGCAGATATTAAGAGGATCACAAACCAATTCCAGGACAAGTTAGGCCAAGGAGCCTATGGAACTGTTTTCAAAGGAAAACTTTCTTCTGAATGCTTTGTTGCTGTAAAAGTTCTCAATAGTTCCAACGGAAATGGGGAAGATTTCATAAGGGAAGTTGGAATGATGGGAAGTATCCACCATGTCAACGTGGTTCGTTTGGTTGGTTTCTGTGCTGATGGGTTTAACAGAGCTCTCGTTTATGAGTTCTTCGCCAATGGTTCACTGCACGATTTCATTTCATCGGCAGACAATAACAATCGTTTCCTTGGTTGGGACAAGTTGCAAGATATTGCTCTTGCTGTAGCCAAGGGAATTTATTATCTTCATCAGGAATGTGAGCAACGAATCCTCCATTTCGACATCAAGCCTCATAATGTTTTATTAGACGACAATTTCACTCCAAAAATTTCTGATTTTGGTTTGGCCAAGTTGTGTTCTAAGGATCAAAGCATAGTGTCCATGACTACAGCTAGAGGGACTATGGGCTACATTGCACCTGAAGTGTTCTCCAGGAACTTTGGAAATGTGTCCTATAAGTCGGACGTCTATAGTTTTGGAATGCTGCTGCTTGAGATGGTAGGGGGAAGGAAGAATATTGATTCAACCTCAGCAATCCCAACTGAAATTTACTATCCAGAATGGATCTATAATCTCCTAGAAGAAGGAGACGACCTACGAATCCATCTTGGGGAGGAAGGAGATGGTAAAACTCCAAAGAAACTCGCAATTGTAGGGCTCTGGTGCATCCAGTGGCATCCAGCGGGTCGTCCTTCCATGAAAGAAGTTGTTCAAATGCTGGAAGGAGGAGAAAACTTAACCATGCCTCCCAATCCTTTTGCATCTACAGGTCCTGCACGAACAAATGCAACTACACCTGCAAGAAATCTAAACATTCAGTTAGAAGCTATTGCTGAATTAGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase Pkinase_Tyr

Protein Analysis

611

Amino Acids

68.95

Weight (kDa)

6.98

Isoelectric Point (pI)

37.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 299 - 569 2e-45 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 301 - 567 1.6e-46 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1792
AatII GACGTC 1 cut(s) 1455
Acc36I ACCTGC 2 cut(s) 849, 1792
AccBSI CCGCTC 2 cut(s) 215, 499
AccII CGCG 1 cut(s) 283
AciI CCGC 6 cut(s) 108, 215, 281, 497, 708, 1670
AclWI GGATC 5 cut(s) 120, 739, 893, 1359, 1559
AcoI YGGCCR 1 cut(s) 1332
AcsI RAATTY 6 cut(s) 227, 660, 701, 1221, 1314, 1533
AcuI CTGAAG 1 cut(s) 1428
AcyI GRCGYC 1 cut(s) 1452
AfaI GTAC 6 cut(s) 491, 514, 524, 551, 641, 721
AfiI CCNNNNNNNGG 4 cut(s) 108, 901, 1180, 1597
AflIII ACRYGT 1 cut(s) 327
AgsI TTSAA 9 cut(s) 404, 470, 580, 665, 814, 821, 940, 1512, 1700
AjnI CCWGG 4 cut(s) 445, 726, 900, 1418
AjuI GAANNNNNNNTTGG 2 cut(s) 847, 879
AluBI AGCT 4 cut(s) 16, 1100, 1379, 1814
AluI AGCT 4 cut(s) 16, 1100, 1379, 1814
Alw21I GWGCWC 2 cut(s) 210, 1102
Alw26I GTCTC 1 cut(s) 1569
AlwI GGATC 5 cut(s) 120, 739, 893, 1359, 1559
AlwNI CAGNNNCTG 1 cut(s) 1760
AoxI GGCC 4 cut(s) 123, 442, 913, 1332
ApeKI GCWGC 5 cut(s) 4, 7, 764, 1471, 1474
ApoI RAATTY 6 cut(s) 227, 660, 701, 1221, 1314, 1533
Asp700I GAANNNNTTC 2 cut(s) 949, 1695
AspLEI GCGC 1 cut(s) 243
AspS9I GGNCC 2 cut(s) 443, 1757
AsuHPI GGTGA 3 cut(s) 235, 247, 269
AvaII GGWCC 1 cut(s) 1757
BalI TGGCCA 1 cut(s) 1334
BanII GRGCYC 2 cut(s) 1102, 1647
Bbv12I GWGCWC 2 cut(s) 210, 1102
BbvCI CCTCAGC 1 cut(s) 1516
BbvI GCAGC 5 cut(s) 16, 19, 776, 1458, 1461
BccI CCATC 6 cut(s) 134, 1027, 1079, 1477, 1599, 1604
BceAI ACGGC 2 cut(s) 129, 695
BciT130I CCWGG 4 cut(s) 447, 728, 902, 1420
BciVI GTATCC 1 cut(s) 1052
BcoDI GTCTC 1 cut(s) 1569
BfaI CTAG 4 cut(s) 503, 687, 1380, 1565
BfmI CTRYAG 7 cut(s) 157, 451, 778, 1209, 1374, 1456, 1752
BfuAI ACCTGC 2 cut(s) 849, 1792
BfuI GTATCC 1 cut(s) 1052
BisI GCNGC 6 cut(s) 5, 8, 708, 765, 1472, 1475
BlsI GCNGC 6 cut(s) 6, 9, 709, 766, 1473, 1476
Bme1390I CCNGG 4 cut(s) 447, 728, 902, 1420
Bme18I GGWCC 1 cut(s) 1757
BmgT120I GGNCC 2 cut(s) 443, 1757
BmiI GGNNCC 2 cut(s) 570, 922
BmrFI CCNGG 4 cut(s) 447, 728, 902, 1420
BmsI GCATC 4 cut(s) 265, 1662, 1672, 1757
BpmI CTGGAG 1 cut(s) 1402
Bpu10I CCTNAGC 1 cut(s) 1516
BpuEI CTTGAG 2 cut(s) 697, 1499
BsaHI GRCGYC 1 cut(s) 1452
BsaJI CCNNGG 7 cut(s) 145, 445, 726, 727, 916, 1174, 1215
BsaXI ACNNNNNCTCC 4 cut(s) 1242, 1272, 1717, 1747
Bsc4I CCNNNNNNNGG 4 cut(s) 108, 901, 1180, 1597
Bse1I ACTGG 1 cut(s) 1657
Bse3DI GCAATG 3 cut(s) 59, 332, 1398
BseBI CCWGG 4 cut(s) 447, 728, 902, 1420
BseDI CCNNGG 7 cut(s) 145, 445, 726, 727, 916, 1174, 1215
BseGI GGATG 4 cut(s) 126, 151, 1653, 1663
BseLI CCNNNNNNNGG 4 cut(s) 108, 901, 1180, 1597
BseMI GCAATG 3 cut(s) 59, 332, 1398
BseMII CTCAG 2 cut(s) 860, 1530
BseNI ACTGG 1 cut(s) 1657
BseRI GAGGAG 1 cut(s) 1728
BseXI GCAGC 5 cut(s) 16, 19, 776, 1458, 1461
BsgI GTGCAG 2 cut(s) 1118, 1746
Bsh1236I CGCG 1 cut(s) 283
BshFI GGCC 4 cut(s) 125, 444, 915, 1334
BsiHKAI GWGCWC 2 cut(s) 210, 1102
BslFI GGGAC 3 cut(s) 413, 1196, 1399
BslI CCNNNNNNNGG 4 cut(s) 108, 901, 1180, 1597
BsmAI GTCTC 1 cut(s) 1569
BsmBI CGTCTC 1 cut(s) 1569
BsmFI GGGAC 3 cut(s) 413, 1196, 1399
BsmI GAATGC 3 cut(s) 85, 965, 1473
BsnI GGCC 4 cut(s) 125, 444, 915, 1334
Bsp1286I GDGCHC 3 cut(s) 210, 1102, 1647
Bsp1407I TGTACA 1 cut(s) 512
Bsp143I GATC 5 cut(s) 112, 731, 885, 1351, 1551
BspACI CCGC 6 cut(s) 108, 215, 281, 497, 708, 1670
BspANI GGCC 4 cut(s) 125, 444, 915, 1334
BspCNI CTCAG 2 cut(s) 859, 1529
BspFNI CGCG 1 cut(s) 283
BspLI GGNNCC 2 cut(s) 570, 922
BspMI ACCTGC 2 cut(s) 849, 1792
BspPI GGATC 5 cut(s) 120, 739, 893, 1359, 1559
BsrBI CCGCTC 2 cut(s) 215, 499
BsrDI GCAATG 3 cut(s) 59, 332, 1398
BsrGI TGTACA 1 cut(s) 512
BsrI ACTGG 1 cut(s) 1657
BssECI CCNNGG 7 cut(s) 145, 445, 726, 727, 916, 1174, 1215
BssMI GATC 5 cut(s) 112, 731, 885, 1351, 1551
BssNI GRCGYC 1 cut(s) 1452
BssT1I CCWWGG 3 cut(s) 916, 1174, 1215
Bst2UI CCWGG 4 cut(s) 447, 728, 902, 1420
Bst4CI ACNGT 3 cut(s) 395, 419, 934
BstACI GRCGYC 1 cut(s) 1452
BstAUI TGTACA 1 cut(s) 512
BstC8I GCNNGC 2 cut(s) 293, 339
BstDEI CTNAG 3 cut(s) 846, 1347, 1516
BstDSI CCRYGG 1 cut(s) 145
BstF5I GGATG 4 cut(s) 126, 151, 1653, 1663
BstFNI CGCG 1 cut(s) 283
BstHHI GCGC 1 cut(s) 243
BstKTI GATC 5 cut(s) 115, 734, 888, 1354, 1554
BstMAI GTCTC 1 cut(s) 1569
BstMBI GATC 5 cut(s) 112, 731, 885, 1351, 1551
BstMWI GCNNNNNNNGC 4 cut(s) 13, 188, 301, 441
BstNI CCWGG 4 cut(s) 447, 728, 902, 1420
BstNSI RCATGY 1 cut(s) 331
BstSCI CCNGG 4 cut(s) 445, 726, 900, 1418
BstSFI CTRYAG 7 cut(s) 157, 451, 778, 1209, 1374, 1456, 1752
BstUI CGCG 1 cut(s) 283
BstV1I GCAGC 5 cut(s) 16, 19, 776, 1458, 1461
BstX2I RGATCY 1 cut(s) 1551
BstYI RGATCY 1 cut(s) 1551
BsuI GTATCC 1 cut(s) 1052
BsuRI GGCC 4 cut(s) 125, 444, 915, 1334
BtgI CCRYGG 1 cut(s) 145
BtsCI GGATG 4 cut(s) 126, 151, 1653, 1663
BtsI GCAGTG 1 cut(s) 1130
BtsIMutI CAGTG 4 cut(s) 391, 654, 1130, 1664
BveI ACCTGC 2 cut(s) 849, 1792
Cac8I GCNNGC 2 cut(s) 293, 339
CaiI CAGNNNCTG 1 cut(s) 1760
CfoI GCGC 1 cut(s) 243
Cfr13I GGNCC 2 cut(s) 443, 1757
Csp6I GTAC 6 cut(s) 490, 513, 523, 550, 640, 720
CviAII CATG 9 cut(s) 116, 179, 328, 367, 696, 1049, 1369, 1684, 1729
CviQI GTAC 6 cut(s) 490, 513, 523, 550, 640, 720
DdeI CTNAG 3 cut(s) 846, 1347, 1516
DpnI GATC 5 cut(s) 114, 733, 887, 1353, 1553
DpnII GATC 5 cut(s) 112, 731, 885, 1351, 1551
EaeI YGGCCR 1 cut(s) 1332
Ecl136II GAGCTC 1 cut(s) 1100
Eco130I CCWWGG 3 cut(s) 916, 1174, 1215
Eco24I GRGCYC 2 cut(s) 1102, 1647
Eco47I GGWCC 1 cut(s) 1757
Eco53kI GAGCTC 1 cut(s) 1100
Eco57I CTGAAG 1 cut(s) 1428
EcoICRI GAGCTC 1 cut(s) 1100
EcoO109I RGGNCCY 1 cut(s) 1757
EcoRII CCWGG 4 cut(s) 445, 726, 900, 1418
EcoT14I CCWWGG 3 cut(s) 916, 1174, 1215
EcoT38I GRGCYC 2 cut(s) 1102, 1647
ErhI CCWWGG 3 cut(s) 916, 1174, 1215
Esp3I CGTCTC 1 cut(s) 1569
FaeI CATG 9 cut(s) 119, 182, 331, 370, 699, 1052, 1372, 1687, 1732
FalI AAGNNNNNCTT 2 cut(s) 933, 965
FaqI GGGAC 3 cut(s) 413, 1196, 1399
FatI CATG 9 cut(s) 115, 178, 327, 366, 695, 1048, 1368, 1683, 1728
FauI CCCGC 3 cut(s) 101, 288, 1663
Fnu4HI GCNGC 6 cut(s) 5, 8, 708, 765, 1472, 1475
FokI GGATG 4 cut(s) 113, 138, 1640, 1650
FriOI GRGCYC 2 cut(s) 1102, 1647
Fsp4HI GCNGC 6 cut(s) 5, 8, 708, 765, 1472, 1475
FspBI CTAG 4 cut(s) 503, 687, 1380, 1565
GlaI GCGC 1 cut(s) 242
GluI GCNGC 6 cut(s) 5, 8, 708, 765, 1472, 1475
GsuI CTGGAG 1 cut(s) 1402
HaeIII GGCC 4 cut(s) 125, 444, 915, 1334
HhaI GCGC 1 cut(s) 243
Hin1I GRCGYC 1 cut(s) 1452
Hin1II CATG 9 cut(s) 119, 182, 331, 370, 699, 1052, 1372, 1687, 1732
Hin6I GCGC 1 cut(s) 241
HinP1I GCGC 1 cut(s) 241
HincII GTYRAC 2 cut(s) 57, 1054
HindII GTYRAC 2 cut(s) 57, 1054
HinfI GANTC 9 cut(s) 362, 470, 506, 538, 633, 805, 1254, 1508, 1587
HpaI GTTAAC 1 cut(s) 57
HphI GGTGA 3 cut(s) 235, 247, 269
Hpy166II GTNNAC 5 cut(s) 57, 149, 513, 1054, 1130
Hpy188I TCNGA 7 cut(s) 68, 165, 172, 849, 958, 1321, 1450
Hpy188III TCNNGA 3 cut(s) 260, 1238, 1544
Hpy8I GTNNAC 5 cut(s) 57, 149, 513, 1054, 1130
HpyAV CCTTC 6 cut(s) 381, 1488, 1565, 1598, 1689, 1703
HpyCH4III ACNGT 3 cut(s) 395, 419, 934
HpyCH4IV ACGT 2 cut(s) 1056, 1452
HpyF10VI GCNNNNNNNGC 4 cut(s) 13, 188, 301, 441
HpyF3I CTNAG 3 cut(s) 846, 1347, 1516
HpySE526I ACGT 2 cut(s) 1056, 1452
Hsp92I GRCGYC 1 cut(s) 1452
Hsp92II CATG 9 cut(s) 119, 182, 331, 370, 699, 1052, 1372, 1687, 1732
HspAI GCGC 1 cut(s) 241
KspAI GTTAAC 1 cut(s) 57
Kzo9I GATC 5 cut(s) 112, 731, 885, 1351, 1551
LmnI GCTCC 3 cut(s) 205, 504, 920
Lsp1109I GCAGC 5 cut(s) 16, 19, 776, 1458, 1461
LweI GCATC 4 cut(s) 265, 1662, 1672, 1757
MaeI CTAG 4 cut(s) 503, 687, 1380, 1565
MaeII ACGT 2 cut(s) 1056, 1452
MaeIII GTNAC 1 cut(s) 691
MalI GATC 5 cut(s) 114, 733, 887, 1353, 1553
MbiI CCGCTC 2 cut(s) 215, 499
MboI GATC 5 cut(s) 112, 731, 885, 1351, 1551
MfeI CAATTG 2 cut(s) 809, 1635
MflI RGATCY 1 cut(s) 1551
MhlI GDGCHC 3 cut(s) 210, 1102, 1647
MlsI TGGCCA 1 cut(s) 1334
MluNI TGGCCA 1 cut(s) 1334
MlyI GAGTC 2 cut(s) 515, 814
MmeI TCCRAC 5 cut(s) 188, 399, 1006, 1017, 1428
Mox20I TGGCCA 1 cut(s) 1334
MroXI GAANNNNTTC 2 cut(s) 949, 1695
MscI TGGCCA 1 cut(s) 1334
MseI TTAA 5 cut(s) 56, 299, 879, 1092, 1724
MslI CAYNNNNRTG 2 cut(s) 183, 326
Msp20I TGGCCA 1 cut(s) 1334
MspA1I CMGCKG 1 cut(s) 1670
MspR9I CCNGG 4 cut(s) 447, 728, 902, 1420
MunI CAATTG 2 cut(s) 809, 1635
Mva1269I GAATGC 3 cut(s) 85, 965, 1473
MvaI CCWGG 4 cut(s) 447, 728, 902, 1420
MvnI CGCG 1 cut(s) 283
MwoI GCNNNNNNNGC 4 cut(s) 13, 188, 301, 441
NdeII GATC 5 cut(s) 112, 731, 885, 1351, 1551
NlaIII CATG 9 cut(s) 119, 182, 331, 370, 699, 1052, 1372, 1687, 1732
NlaIV GGNNCC 2 cut(s) 570, 922
NspI RCATGY 1 cut(s) 331
PaqCI CACCTGC 1 cut(s) 1792
PasI CCCWGGG 1 cut(s) 727
PciI ACATGT 1 cut(s) 327
PctI GAATGC 3 cut(s) 85, 965, 1473
PdmI GAANNNNTTC 2 cut(s) 949, 1695
PfeI GAWTC 7 cut(s) 362, 470, 538, 633, 1254, 1508, 1587
PfoI TCCNGGA 2 cut(s) 900, 1418
PkrI GCNGC 6 cut(s) 6, 9, 709, 766, 1473, 1476
PleI GAGTC 2 cut(s) 514, 813
PpsI GAGTC 2 cut(s) 514, 813
PpuMI RGGWCCY 1 cut(s) 1757
PscI ACATGT 1 cut(s) 327
Psp124BI GAGCTC 1 cut(s) 1102
Psp5II RGGWCCY 1 cut(s) 1757
Psp6I CCWGG 4 cut(s) 445, 726, 900, 1418
PspGI CCWGG 4 cut(s) 445, 726, 900, 1418
PspN4I GGNNCC 2 cut(s) 570, 922
PspPI GGNCC 2 cut(s) 443, 1757
PspPPI RGGWCCY 1 cut(s) 1757
PstNI CAGNNNCTG 1 cut(s) 1760
PsuI RGATCY 1 cut(s) 1551
RsaI GTAC 6 cut(s) 491, 514, 524, 551, 641, 721
RsaNI GTAC 6 cut(s) 490, 513, 523, 550, 640, 720
RseI CAYNNNNRTG 2 cut(s) 183, 326
SacI GAGCTC 1 cut(s) 1102
SaqAI TTAA 5 cut(s) 56, 299, 879, 1092, 1724
SatI GCNGC 6 cut(s) 5, 8, 708, 765, 1472, 1475
Sau3AI GATC 5 cut(s) 112, 731, 885, 1351, 1551
Sau96I GGNCC 2 cut(s) 443, 1757
SchI GAGTC 2 cut(s) 515, 814
ScrFI CCNGG 4 cut(s) 447, 728, 902, 1420
SduI GDGCHC 3 cut(s) 210, 1102, 1647
SfaNI GCATC 4 cut(s) 265, 1662, 1672, 1757
SfcI CTRYAG 7 cut(s) 157, 451, 778, 1209, 1374, 1456, 1752
SinI GGWCC 1 cut(s) 1757
SmiMI CAYNNNNRTG 2 cut(s) 183, 326
SmlI CTYRAG 2 cut(s) 676, 1478
SmoI CTYRAG 2 cut(s) 676, 1478
SsiI CCGC 6 cut(s) 108, 215, 281, 497, 708, 1670
SspI AATATT 1 cut(s) 1504
SspMI CTAG 4 cut(s) 503, 687, 1380, 1565
SstI GAGCTC 1 cut(s) 1102
StyD4I CCNGG 4 cut(s) 445, 726, 900, 1418
StyI CCWWGG 3 cut(s) 916, 1174, 1215
TaaI ACNGT 3 cut(s) 395, 419, 934
TaiI ACGT 2 cut(s) 1059, 1455
TaqI TCGA 3 cut(s) 536, 790, 1266
TatI WGTACW 4 cut(s) 489, 512, 549, 639
TauI GCSGC 1 cut(s) 710
TfiI GAWTC 7 cut(s) 362, 470, 538, 633, 1254, 1508, 1587
Tru1I TTAA 5 cut(s) 56, 299, 879, 1092, 1724
Tru9I TTAA 5 cut(s) 56, 299, 879, 1092, 1724
TscAI CASTG 4 cut(s) 398, 661, 1137, 1664
TseI GCWGC 5 cut(s) 4, 7, 764, 1471, 1474
TspDTI ATGAA 5 cut(s) 1003, 1132, 1137, 1223, 1700
TspGWI ACGGA 2 cut(s) 213, 1011
TspRI CASTG 4 cut(s) 398, 661, 1137, 1664
VpaK11BI GGWCC 1 cut(s) 1757
XapI RAATTY 6 cut(s) 227, 660, 701, 1221, 1314, 1533
XceI RCATGY 1 cut(s) 331
XcmI CCANNNNNNNNNTGG 1 cut(s) 923
XmnI GAANNNNTTC 2 cut(s) 949, 1695
XspI CTAG 4 cut(s) 503, 687, 1380, 1565
ZraI GACGTC 1 cut(s) 1453
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.