RchiOBHm_Chr1g0329541

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000107
Physical Location & Seq
Reverse (-)
19293400 .. 19295421
2022 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ55885

Sequence Viewer

Length: 1779 bp
ATGCTAATGTCAATGGCTTTCTTCAAGGTGTGCCATAATGCATGCACAGAATCAGAGTGTGGTGACCATGATGATCATCGCCTTGCTATTCATGTCCCGGTCAATCGCGCCCGTTGTCGTGGTGGTTATTTTCAGCAGCAGAGCGACAAGACGGTTGTTGAGCAGAAGCAAATGTTAGTAAAATTCTTTGTGAAACACATAGATTATAAGCACCAGAAAATTCAAGTACATACTCCAGATGATTGCTTTCTCCTAAAGCAATTAGAAACCCCAAGCATGAAACCAATGTTCTCTCCTTTGAACTTCTCAGAATATCAGCCGTATCAGTGCATCAGCTTATTCAACTGTCCCACAGCTAATTATCCGCACATGCAAGTCCCCTGCCTCAGTGACCTGGTATACAAAAATATCTATGCCGTTTCTTCGGAGGTTCAAGCCCCACAGTACTGTACAAAGATGTATGATTTAATAAATCCATACGGACCTATGCATCCGGGTAACTATTTTTGGTATCCAGATAACTATTTTTTGTATCCAGATAACTATTTTCGGTGGTCTACACCAAATTGTACAGAATGTGAAGCGAAGCGTAAGAAGTGTCAATTGAAGATCAACGGCACCGAAAGTGAAATTGAATGTGTTCATTTTAGCAAACCAAGTGCAACTGTGACTACAATCATTTTACTAATATTGGTGACTGTATTCTATAGATCTGATAAAAAGGAAAGAGAGAATCAATTGAAAATTGAAAAATTCCTAGAGGATTACAAAGCGCTCAAGCCAAGCAGATATTCCTACGCAGATATTAAAAGAATTACAAATCAATTTGAGGACAAGTTGGGCCAAGGAGCGTATGGAACTGTTTTCAAAGGGAAGCTTTCATCTGAAGTTTTTGTTGCTGTTAAAGTCCTCAACAATTCCGAAAAAGGAGATGGGGAAGAATTCATCAATGAGGTGGGAACAATGGGTCATATCCATCATGTCAACGTGGTTCGCATGGTTGGCTTCTGTGCAGAAGGATTTAGACGAGCTCTTGTTTATGAGTTTTTCCCCAATGGTTCGCTACAGGATTTCATTTCATCAGCAGACAACAAGAATTCTTTCCTTGGTTGGGATAAGTTAAAAGATATTTCTCTAGGCATTGCCAAAGGAATTGAATATCTACACCAAGGATGCGATCAACGAATTCTTCATTTTGATATCAAACCTCAAAATGTTTTGCTAGATCAAAACTTCACTCCAAAAATTTCTGATTTTGGGATGTCCAAGTTGTGTGCCAAGGATCAAAGTATAGTGTCAATGACTATGGCTAGGGGGACTATAGGCTATATTGCGCCTGAAGTGTTCTCCCGGAATTTTGGAAATGTGTCATATAAGTCAGATGTCTATAGTTTTGGAATGTTGTTGCTCGAGATTGTAGGAGGGAGGAAGAATATTGGTGAAACCATGGATAACTCTGGGGAAGTATACTACCCAGAATGGATACATAATCTTTTAGATGAAGGGGAAGACCTTCGAGTCCATATTGGGGAAGAAGGATCGAGAATAGATTCTCGAATTCCAAAAGAACTAGCAATTGTAGGCCTTTGGTGTATCCAATGGCACCCAATGAATCGTCCATCCATGAAATCAGTGGTTCAGATGTTGGGAGGAAGAGAAAACTTAACCATGCCACCTACCCCTTTTGCCTCTACAGGTCCTACAAGAACTAATGCAACAAGTCGCCCGGCTGCAAGACGCTTCAACCTCGACTTAGAAGCAATTGTTGAATTAGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase

Protein Analysis

592

Amino Acids

67.76

Weight (kDa)

6.66

Isoelectric Point (pI)

44.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 275 - 549 3.2e-46 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 276 - 547 6.4e-47 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 207
AasI GACNNNNNNGTC 1 cut(s) 1517
AccB1I GGYRCC 2 cut(s) 617, 1602
AccI GTMKAC 3 cut(s) 399, 557, 1467
AccII CGCG 1 cut(s) 108
AciI CCGC 1 cut(s) 365
AclWI GGATC 2 cut(s) 1290, 1546
AcsI RAATTY 9 cut(s) 182, 219, 752, 941, 1096, 1185, 1245, 1354, 1557
AcuI CTGAAG 2 cut(s) 906, 1359
AfaI GTAC 4 cut(s) 228, 446, 451, 571
AfeI AGCGCT 1 cut(s) 774
AfiI CCNNNNNNNGG 2 cut(s) 1111, 1528
AjnI CCWGG 1 cut(s) 393
AjuI GAANNNNNNNTTGG 2 cut(s) 775, 807
AluBI AGCT 4 cut(s) 336, 356, 877, 1031
AluI AGCT 4 cut(s) 336, 356, 877, 1031
Alw21I GWGCWC 1 cut(s) 1033
AlwI GGATC 2 cut(s) 1290, 1546
Ama87I CYCGRG 1 cut(s) 1409
Aor51HI AGCGCT 1 cut(s) 774
AoxI GGCC 2 cut(s) 841, 1582
ApeKI GCWGC 2 cut(s) 136, 1730
ApoI RAATTY 9 cut(s) 182, 219, 752, 941, 1096, 1185, 1245, 1354, 1557
Asp700I GAANNNNTTC 4 cut(s) 639, 1100, 1512, 1549
AspLEI GCGC 3 cut(s) 110, 775, 1336
AspS9I GGNCC 3 cut(s) 482, 841, 1697
AsuC2I CCSGG 4 cut(s) 98, 495, 1351, 1727
AsuHPI GGTGA 3 cut(s) 74, 706, 1451
AvaI CYCGRG 1 cut(s) 1409
AvaII GGWCC 2 cut(s) 482, 1697
BanI GGYRCC 2 cut(s) 617, 1602
BanII GRGCYC 1 cut(s) 1033
BbsI GAAGAC 1 cut(s) 1515
Bbv12I GWGCWC 1 cut(s) 1033
BbvI GCAGC 2 cut(s) 148, 1717
BccI CCATC 3 cut(s) 926, 984, 1627
BceAI ACGGC 3 cut(s) 304, 401, 631
BciT130I CCWGG 1 cut(s) 395
BciVI GTATCC 4 cut(s) 522, 543, 1476, 1604
BclI TGATCA 1 cut(s) 73
BcnI CCSGG 4 cut(s) 98, 495, 1351, 1727
BfaI CTAG 5 cut(s) 758, 1136, 1223, 1311, 1571
BfmI CTRYAG 5 cut(s) 706, 1064, 1320, 1387, 1692
BfoI RGCGCY 1 cut(s) 776
BfuI GTATCC 4 cut(s) 522, 543, 1476, 1604
BglII AGATCT 1 cut(s) 710
BisI GCNGC 2 cut(s) 137, 1731
BlsI GCNGC 2 cut(s) 138, 1732
BmcAI AGTACT 1 cut(s) 446
Bme1390I CCNGG 5 cut(s) 98, 395, 495, 1351, 1727
Bme18I GGWCC 2 cut(s) 482, 1697
BmeT110I CYCGRG 1 cut(s) 1409
BmgT120I GGNCC 3 cut(s) 482, 841, 1697
BmiI GGNNCC 2 cut(s) 619, 1604
BmrFI CCNGG 5 cut(s) 98, 395, 495, 1351, 1727
BmsI GCATC 3 cut(s) 339, 499, 1163
BpiI GAAGAC 1 cut(s) 1515
BpmI CTGGAG 1 cut(s) 219
BpuEI CTTGAG 1 cut(s) 761
BpuMI CCSGG 4 cut(s) 98, 495, 1351, 1727
BsaBI GATNNNNATC 1 cut(s) 75
BsaJI CCNNGG 5 cut(s) 844, 1105, 1168, 1278, 1446
Bsc4I CCNNNNNNNGG 2 cut(s) 1111, 1528
Bse3DI GCAATG 1 cut(s) 1140
Bse8I GATNNNNATC 1 cut(s) 75
BseBI CCWGG 1 cut(s) 395
BseDI CCNNGG 5 cut(s) 844, 1105, 1168, 1278, 1446
BseGI GGATG 4 cut(s) 490, 1178, 1266, 1619
BseJI GATNNNNATC 1 cut(s) 75
BseLI CCNNNNNNNGG 2 cut(s) 1111, 1528
BseMI GCAATG 1 cut(s) 1140
BseMII CTCAG 2 cut(s) 321, 400
BseXI GCAGC 2 cut(s) 148, 1717
BsgI GTGCAG 1 cut(s) 1032
Bsh1236I CGCG 1 cut(s) 108
BshFI GGCC 2 cut(s) 843, 1584
BshNI GGYRCC 2 cut(s) 617, 1602
BsiHKAI GWGCWC 1 cut(s) 1033
BsiHKCI CYCGRG 1 cut(s) 1409
BsiSI CCGG 4 cut(s) 98, 494, 1351, 1727
BslFI GGGAC 4 cut(s) 80, 333, 362, 1330
BslI CCNNNNNNNGG 2 cut(s) 1111, 1528
BsmFI GGGAC 4 cut(s) 80, 333, 362, 1330
BsnI GGCC 2 cut(s) 843, 1584
BsoBI CYCGRG 1 cut(s) 1409
Bsp1286I GDGCHC 1 cut(s) 1033
Bsp1407I TGTACA 2 cut(s) 449, 569
Bsp143I GATC 7 cut(s) 73, 609, 710, 1177, 1225, 1282, 1538
Bsp19I CCATGG 1 cut(s) 1446
BspACI CCGC 1 cut(s) 365
BspANI GGCC 2 cut(s) 843, 1584
BspCNI CTCAG 2 cut(s) 320, 399
BspFNI CGCG 1 cut(s) 108
BspLI GGNNCC 2 cut(s) 619, 1604
BspPI GGATC 2 cut(s) 1290, 1546
BspT107I GGYRCC 2 cut(s) 617, 1602
BsrDI GCAATG 1 cut(s) 1140
BsrGI TGTACA 2 cut(s) 449, 569
BssECI CCNNGG 5 cut(s) 844, 1105, 1168, 1278, 1446
BssMI GATC 7 cut(s) 73, 609, 710, 1177, 1225, 1282, 1538
BssNAI GTATAC 2 cut(s) 400, 1468
BssT1I CCWWGG 5 cut(s) 844, 1105, 1168, 1278, 1446
Bst1107I GTATAC 2 cut(s) 400, 1468
Bst2UI CCWGG 1 cut(s) 395
Bst4CI ACNGT 7 cut(s) 154, 347, 444, 449, 667, 700, 862
Bst6I CTCTTC 1 cut(s) 1648
BstAUI TGTACA 2 cut(s) 449, 569
BstC8I GCNNGC 1 cut(s) 43
BstDEI CTNAG 3 cut(s) 307, 386, 1753
BstDSI CCRYGG 1 cut(s) 1446
BstEII GGTNACC 1 cut(s) 62
BstF5I GGATG 4 cut(s) 490, 1178, 1266, 1619
BstFNI CGCG 1 cut(s) 108
BstH2I RGCGCY 1 cut(s) 776
BstHHI GCGC 3 cut(s) 110, 775, 1336
BstKTI GATC 7 cut(s) 76, 612, 713, 1180, 1228, 1285, 1541
BstMBI GATC 7 cut(s) 73, 609, 710, 1177, 1225, 1282, 1538
BstMWI GCNNNNNNNGC 1 cut(s) 1002
BstNI CCWGG 1 cut(s) 395
BstNSI RCATGY 2 cut(s) 45, 373
BstPI GGTNACC 1 cut(s) 62
BstSCI CCNGG 5 cut(s) 96, 393, 493, 1349, 1725
BstSFI CTRYAG 5 cut(s) 706, 1064, 1320, 1387, 1692
BstUI CGCG 1 cut(s) 108
BstV1I GCAGC 2 cut(s) 148, 1717
BstV2I GAAGAC 1 cut(s) 1515
BstX2I RGATCY 1 cut(s) 710
BstYI RGATCY 1 cut(s) 710
BstZ17I GTATAC 2 cut(s) 400, 1468
BsuI GTATCC 4 cut(s) 522, 543, 1476, 1604
BsuRI GGCC 2 cut(s) 843, 1584
BtgI CCRYGG 1 cut(s) 1446
BtgZI GCGATG 1 cut(s) 62
BtsCI GGATG 4 cut(s) 490, 1178, 1266, 1619
BtsIMutI CAGTG 3 cut(s) 332, 394, 1638
Cac8I GCNNGC 1 cut(s) 43
CfoI GCGC 3 cut(s) 110, 775, 1336
Cfr13I GGNCC 3 cut(s) 482, 841, 1697
CseI GACGC 1 cut(s) 1746
CsiI ACCWGGT 1 cut(s) 393
Csp6I GTAC 4 cut(s) 227, 445, 450, 570
CviQI GTAC 4 cut(s) 227, 445, 450, 570
DdeI CTNAG 3 cut(s) 307, 386, 1753
DpnI GATC 7 cut(s) 75, 611, 712, 1179, 1227, 1284, 1540
DpnII GATC 7 cut(s) 73, 609, 710, 1177, 1225, 1282, 1538
DrdI GACNNNNNNGTC 1 cut(s) 1517
DseDI GACNNNNNNGTC 1 cut(s) 1517
Eam1104I CTCTTC 1 cut(s) 1648
EarI CTCTTC 1 cut(s) 1648
Ecl136II GAGCTC 1 cut(s) 1031
Eco130I CCWWGG 5 cut(s) 844, 1105, 1168, 1278, 1446
Eco147I AGGCCT 1 cut(s) 1584
Eco24I GRGCYC 1 cut(s) 1033
Eco32I GATATC 1 cut(s) 1201
Eco47I GGWCC 2 cut(s) 482, 1697
Eco47III AGCGCT 1 cut(s) 774
Eco53kI GAGCTC 1 cut(s) 1031
Eco57I CTGAAG 2 cut(s) 906, 1359
Eco88I CYCGRG 1 cut(s) 1409
Eco91I GGTNACC 1 cut(s) 62
EcoICRI GAGCTC 1 cut(s) 1031
EcoO109I RGGNCCY 1 cut(s) 1697
EcoO65I GGTNACC 1 cut(s) 62
EcoRI GAATTC 4 cut(s) 941, 1096, 1185, 1557
EcoRII CCWGG 1 cut(s) 393
EcoRV GATATC 1 cut(s) 1201
EcoT14I CCWWGG 5 cut(s) 844, 1105, 1168, 1278, 1446
EcoT22I ATGCAT 2 cut(s) 43, 492
EcoT38I GRGCYC 1 cut(s) 1033
ErhI CCWWGG 5 cut(s) 844, 1105, 1168, 1278, 1446
FalI AAGNNNNNCTT 2 cut(s) 861, 893
FaqI GGGAC 4 cut(s) 80, 333, 362, 1330
FbaI TGATCA 1 cut(s) 73
FblI GTMKAC 3 cut(s) 399, 557, 1467
Fnu4HI GCNGC 2 cut(s) 137, 1731
FokI GGATG 4 cut(s) 477, 1185, 1273, 1606
FriOI GRGCYC 1 cut(s) 1033
Fsp4HI GCNGC 2 cut(s) 137, 1731
FspBI CTAG 5 cut(s) 758, 1136, 1223, 1311, 1571
GlaI GCGC 3 cut(s) 109, 774, 1335
GluI GCNGC 2 cut(s) 137, 1731
GsuI CTGGAG 1 cut(s) 219
HaeII RGCGCY 1 cut(s) 776
HaeIII GGCC 2 cut(s) 843, 1584
HapII CCGG 4 cut(s) 98, 494, 1351, 1727
HgaI GACGC 1 cut(s) 1746
HhaI GCGC 3 cut(s) 110, 775, 1336
Hin6I GCGC 3 cut(s) 108, 773, 1334
HinP1I GCGC 3 cut(s) 108, 773, 1334
HincII GTYRAC 1 cut(s) 985
HindII GTYRAC 1 cut(s) 985
HindIII AAGCTT 1 cut(s) 875
HinfI GANTC 5 cut(s) 50, 733, 1518, 1550, 1612
HpaII CCGG 4 cut(s) 98, 494, 1351, 1727
HphI GGTGA 3 cut(s) 74, 706, 1451
Hpy166II GTNNAC 4 cut(s) 400, 558, 985, 1468
Hpy188I TCNGA 9 cut(s) 55, 310, 427, 715, 886, 922, 1252, 1381, 1641
Hpy188III TCNNGA 6 cut(s) 236, 515, 536, 1411, 1542, 1554
Hpy8I GTNNAC 4 cut(s) 400, 558, 985, 1468
HpyAV CCTTC 4 cut(s) 1010, 1496, 1523, 1529
HpyCH4III ACNGT 7 cut(s) 154, 347, 444, 449, 667, 700, 862
HpyCH4IV ACGT 1 cut(s) 987
HpyCH4V TGCA 9 cut(s) 41, 45, 330, 373, 490, 662, 1013, 1715, 1733
HpyF10VI GCNNNNNNNGC 1 cut(s) 1002
HpyF3I CTNAG 3 cut(s) 307, 386, 1753
HpySE526I ACGT 1 cut(s) 987
HspAI GCGC 3 cut(s) 108, 773, 1334
Ksp22I TGATCA 1 cut(s) 73
Kzo9I GATC 7 cut(s) 73, 609, 710, 1177, 1225, 1282, 1538
LmnI GCTCC 1 cut(s) 848
Lsp1109I GCAGC 2 cut(s) 148, 1717
LweI GCATC 3 cut(s) 339, 499, 1163
MabI ACCWGGT 1 cut(s) 393
MaeI CTAG 5 cut(s) 758, 1136, 1223, 1311, 1571
MaeII ACGT 1 cut(s) 987
MaeIII GTNAC 5 cut(s) 62, 389, 497, 667, 694
MalI GATC 7 cut(s) 75, 611, 712, 1179, 1227, 1284, 1540
MboI GATC 7 cut(s) 73, 609, 710, 1177, 1225, 1282, 1538
MboII GAAGA 9 cut(s) 13, 414, 619, 950, 1181, 1441, 1520, 1544, 1665
MfeI CAATTG 4 cut(s) 602, 737, 1575, 1761
MflI RGATCY 1 cut(s) 710
MhlI GDGCHC 1 cut(s) 1033
MlyI GAGTC 1 cut(s) 1527
Mph1103I ATGCAT 2 cut(s) 43, 492
MroXI GAANNNNTTC 4 cut(s) 639, 1100, 1512, 1549
MseI TTAA 5 cut(s) 467, 807, 903, 1121, 1664
MspI CCGG 4 cut(s) 98, 494, 1351, 1727
MspR9I CCNGG 5 cut(s) 98, 395, 495, 1351, 1727
MunI CAATTG 4 cut(s) 602, 737, 1575, 1761
MvaI CCWGG 1 cut(s) 395
MvnI CGCG 1 cut(s) 108
MwoI GCNNNNNNNGC 1 cut(s) 1002
NciI CCSGG 4 cut(s) 98, 495, 1351, 1727
NcoI CCATGG 1 cut(s) 1446
NdeII GATC 7 cut(s) 73, 609, 710, 1177, 1225, 1282, 1538
NlaIV GGNNCC 2 cut(s) 619, 1604
NmuCI GTSAC 4 cut(s) 62, 389, 667, 694
NsiI ATGCAT 2 cut(s) 43, 492
NspI RCATGY 2 cut(s) 45, 373
PaeI GCATGC 1 cut(s) 45
PaeR7I CTCGAG 1 cut(s) 1409
PceI AGGCCT 1 cut(s) 1584
PdmI GAANNNNTTC 4 cut(s) 639, 1100, 1512, 1549
PfeI GAWTC 4 cut(s) 50, 733, 1550, 1612
PfoI TCCNGGA 1 cut(s) 1349
PkrI GCNGC 2 cut(s) 138, 1732
PleI GAGTC 1 cut(s) 1526
PpsI GAGTC 1 cut(s) 1526
PpuMI RGGWCCY 1 cut(s) 1697
PsiI TTATAA 1 cut(s) 207
Psp124BI GAGCTC 1 cut(s) 1033
Psp5II RGGWCCY 1 cut(s) 1697
Psp6I CCWGG 1 cut(s) 393
PspEI GGTNACC 1 cut(s) 62
PspGI CCWGG 1 cut(s) 393
PspN4I GGNNCC 2 cut(s) 619, 1604
PspPI GGNCC 3 cut(s) 482, 841, 1697
PspPPI RGGWCCY 1 cut(s) 1697
PsuI RGATCY 1 cut(s) 710
RsaI GTAC 4 cut(s) 228, 446, 451, 571
RsaNI GTAC 4 cut(s) 227, 445, 450, 570
SacI GAGCTC 1 cut(s) 1033
SaqAI TTAA 5 cut(s) 467, 807, 903, 1121, 1664
SatI GCNGC 2 cut(s) 137, 1731
Sau3AI GATC 7 cut(s) 73, 609, 710, 1177, 1225, 1282, 1538
Sau96I GGNCC 3 cut(s) 482, 841, 1697
ScaI AGTACT 1 cut(s) 446
SchI GAGTC 1 cut(s) 1527
ScrFI CCNGG 5 cut(s) 98, 395, 495, 1351, 1727
SduI GDGCHC 1 cut(s) 1033
SexAI ACCWGGT 1 cut(s) 393
SfaNI GCATC 3 cut(s) 339, 499, 1163
SfcI CTRYAG 5 cut(s) 706, 1064, 1320, 1387, 1692
Sfr274I CTCGAG 1 cut(s) 1409
SinI GGWCC 2 cut(s) 482, 1697
SlaI CTCGAG 1 cut(s) 1409
SmlI CTYRAG 2 cut(s) 776, 1409
SmoI CTYRAG 2 cut(s) 776, 1409
SphI GCATGC 1 cut(s) 45
SseBI AGGCCT 1 cut(s) 1584
SsiI CCGC 1 cut(s) 365
SspI AATATT 2 cut(s) 690, 1435
SspMI CTAG 5 cut(s) 758, 1136, 1223, 1311, 1571
SstI GAGCTC 1 cut(s) 1033
StuI AGGCCT 1 cut(s) 1584
StyD4I CCNGG 5 cut(s) 96, 393, 493, 1349, 1725
StyI CCWWGG 5 cut(s) 844, 1105, 1168, 1278, 1446
TaaI ACNGT 7 cut(s) 154, 347, 444, 449, 667, 700, 862
TaiI ACGT 1 cut(s) 990
TaqI TCGA 5 cut(s) 1410, 1516, 1541, 1555, 1749
TatI WGTACW 4 cut(s) 226, 444, 449, 569
TfiI GAWTC 4 cut(s) 50, 733, 1550, 1612
Tru1I TTAA 5 cut(s) 467, 807, 903, 1121, 1664
Tru9I TTAA 5 cut(s) 467, 807, 903, 1121, 1664
TscAI CASTG 3 cut(s) 332, 394, 1638
TseFI GTSAC 4 cut(s) 62, 389, 667, 694
TseI GCWGC 2 cut(s) 136, 1730
Tsp45I GTSAC 4 cut(s) 62, 389, 667, 694
TspGWI ACGGA 1 cut(s) 495
TspRI CASTG 3 cut(s) 332, 394, 1638
VpaK11BI GGWCC 2 cut(s) 482, 1697
XapI RAATTY 9 cut(s) 182, 219, 752, 941, 1096, 1185, 1245, 1354, 1557
XceI RCATGY 2 cut(s) 45, 373
XcmI CCANNNNNNNNNTGG 2 cut(s) 851, 1630
XhoI CTCGAG 1 cut(s) 1409
XmiI GTMKAC 3 cut(s) 399, 557, 1467
XmnI GAANNNNTTC 4 cut(s) 639, 1100, 1512, 1549
XspI CTAG 5 cut(s) 758, 1136, 1223, 1311, 1571
ZrmI AGTACT 1 cut(s) 446
Zsp2I ATGCAT 2 cut(s) 43, 492
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.