Rmu_sc0000725.1_g000009

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000725.1
Physical Location & Seq
Reverse (-)
46096 .. 46925
830 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000725.1_g000009.1.cds

Sequence Viewer

Length: 600 bp
atggagctcagttcaaaaccaaatttagtacccattggtgcatccctgggttcattggtactcatactacttgctgctgcagcttatcatgtctatagttctgacagaaaagaaaaacagaatcaattaaaaattgaaatttttttagaggattacagagctctcaaaccaagcagatactcttatgcagatatcaagaggattacaaatcagttcaaggacaaattaggccaaggagcctatggaactgtttataagggaaagctttcttctgaatgttttgttgctgtcaaagtcctcaatagtacaaagggggatggggaagagtttgtaaatgaagtgggaacaatgggtcatatccaccatgtcaatgtggttcgcttggttggattctgcgctgatgggtttagacgagctcttgtttatgacttcttacctaatgggtcactgcaagatttcatttcatcagcagacaataacaattctttccttggttgggataagttgcaagatattgctctaggcatagccaaaggaattgaatatctacaccaaggatgcgatcaacgaatcctccatttcgataaatgttttgcttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

199

Amino Acids

22.16

Weight (kDa)

7.68

Isoelectric Point (pI)

29.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 255
AcsI RAATTY 2 cut(s) 22, 138
AfaI GTAC 3 cut(s) 30, 60, 307
AfiI CCNNNNNNNGG 1 cut(s) 496
AgsI TTSAA 4 cut(s) 15, 137, 217, 542
AjnI CCWGG 1 cut(s) 45
AluBI AGCT 5 cut(s) 7, 83, 161, 265, 416
AluI AGCT 5 cut(s) 7, 83, 161, 265, 416
Alw21I GWGCWC 3 cut(s) 9, 163, 418
AoxI GGCC 1 cut(s) 229
ApeKI GCWGC 3 cut(s) 74, 77, 80
ApoI RAATTY 2 cut(s) 22, 138
Asp700I GAANNNNTTC 1 cut(s) 265
AspLEI GCGC 1 cut(s) 398
BanII GRGCYC 3 cut(s) 9, 163, 418
Bbv12I GWGCWC 3 cut(s) 9, 163, 418
BbvI GCAGC 3 cut(s) 61, 64, 92
BccI CCATC 2 cut(s) 311, 395
BciT130I CCWGG 1 cut(s) 47
BfaI CTAG 1 cut(s) 521
BfmI CTRYAG 2 cut(s) 78, 94
BisI GCNGC 3 cut(s) 75, 78, 81
BlsI GCNGC 3 cut(s) 76, 79, 82
Bme1390I CCNGG 1 cut(s) 47
BmiI GGNNCC 1 cut(s) 238
BmrFI CCNGG 1 cut(s) 47
BmsI GCATC 2 cut(s) 50, 548
BsaJI CCNNGG 5 cut(s) 45, 46, 232, 490, 553
BsaXI ACNNNNNCTCC 2 cut(s) 558, 588
Bsc4I CCNNNNNNNGG 1 cut(s) 496
BseBI CCWGG 1 cut(s) 47
BseDI CCNNGG 5 cut(s) 45, 46, 232, 490, 553
BseGI GGATG 3 cut(s) 41, 322, 563
BseLI CCNNNNNNNGG 1 cut(s) 496
BseMII CTCAG 1 cut(s) 22
BseXI GCAGC 3 cut(s) 61, 64, 92
BshFI GGCC 1 cut(s) 231
BsiHKAI GWGCWC 3 cut(s) 9, 163, 418
BslI CCNNNNNNNGG 1 cut(s) 496
BsnI GGCC 1 cut(s) 231
Bsp1286I GDGCHC 3 cut(s) 9, 163, 418
Bsp143I GATC 1 cut(s) 562
BspANI GGCC 1 cut(s) 231
BspCNI CTCAG 1 cut(s) 21
BspLI GGNNCC 1 cut(s) 238
BspMAI CTGCAG 1 cut(s) 82
BssECI CCNNGG 5 cut(s) 45, 46, 232, 490, 553
BssMI GATC 1 cut(s) 562
BssT1I CCWWGG 3 cut(s) 232, 490, 553
Bst2UI CCWGG 1 cut(s) 47
Bst4CI ACNGT 1 cut(s) 250
Bst6I CTCTTC 1 cut(s) 318
BstDEI CTNAG 1 cut(s) 8
BstF5I GGATG 3 cut(s) 41, 322, 563
BstHHI GCGC 1 cut(s) 398
BstKTI GATC 1 cut(s) 565
BstMBI GATC 1 cut(s) 562
BstMWI GCNNNNNNNGC 1 cut(s) 80
BstNI CCWGG 1 cut(s) 47
BstSCI CCNGG 1 cut(s) 45
BstSFI CTRYAG 2 cut(s) 78, 94
BstV1I GCAGC 3 cut(s) 61, 64, 92
BsuRI GGCC 1 cut(s) 231
BtsCI GGATG 3 cut(s) 41, 322, 563
BtsI GCAGTG 1 cut(s) 446
BtsIMutI CAGTG 1 cut(s) 446
CfoI GCGC 1 cut(s) 398
Csp6I GTAC 3 cut(s) 29, 59, 306
CviAII CATG 2 cut(s) 89, 365
CviJI RGCY 8 cut(s) 7, 83, 161, 231, 239, 265, 416, 530
CviKI_1 RGCY 8 cut(s) 7, 83, 161, 231, 239, 265, 416, 530
CviQI GTAC 3 cut(s) 29, 59, 306
DdeI CTNAG 1 cut(s) 8
DpnI GATC 1 cut(s) 564
DpnII GATC 1 cut(s) 562
Eam1104I CTCTTC 1 cut(s) 318
EarI CTCTTC 1 cut(s) 318
Ecl136II GAGCTC 3 cut(s) 7, 161, 416
Eco130I CCWWGG 3 cut(s) 232, 490, 553
Eco24I GRGCYC 3 cut(s) 9, 163, 418
Eco32I GATATC 1 cut(s) 193
Eco53kI GAGCTC 3 cut(s) 7, 161, 416
EcoICRI GAGCTC 3 cut(s) 7, 161, 416
EcoRII CCWGG 1 cut(s) 45
EcoRV GATATC 1 cut(s) 193
EcoT14I CCWWGG 3 cut(s) 232, 490, 553
EcoT38I GRGCYC 3 cut(s) 9, 163, 418
ErhI CCWWGG 3 cut(s) 232, 490, 553
FaeI CATG 2 cut(s) 92, 368
FatI CATG 2 cut(s) 88, 364
Fnu4HI GCNGC 3 cut(s) 75, 78, 81
FokI GGATG 3 cut(s) 28, 329, 570
FriOI GRGCYC 3 cut(s) 9, 163, 418
Fsp4HI GCNGC 3 cut(s) 75, 78, 81
FspBI CTAG 1 cut(s) 521
GlaI GCGC 1 cut(s) 397
GluI GCNGC 3 cut(s) 75, 78, 81
HaeIII GGCC 1 cut(s) 231
HhaI GCGC 1 cut(s) 398
Hin1II CATG 2 cut(s) 92, 368
Hin6I GCGC 1 cut(s) 396
HinP1I GCGC 1 cut(s) 396
HindIII AAGCTT 1 cut(s) 263
HinfI GANTC 3 cut(s) 121, 390, 570
Hpy188I TCNGA 2 cut(s) 103, 274
Hpy188III TCNNGA 1 cut(s) 196
HpyCH4III ACNGT 1 cut(s) 250
HpyCH4V TGCA 5 cut(s) 41, 80, 188, 451, 508
HpyF10VI GCNNNNNNNGC 1 cut(s) 80
HpyF3I CTNAG 1 cut(s) 8
Hsp92II CATG 2 cut(s) 92, 368
HspAI GCGC 1 cut(s) 396
Kzo9I GATC 1 cut(s) 562
LmnI GCTCC 2 cut(s) 4, 236
LpnPI CCDG 2 cut(s) 32, 59
Lsp1109I GCAGC 3 cut(s) 61, 64, 92
LweI GCATC 2 cut(s) 50, 548
MaeI CTAG 1 cut(s) 521
MaeIII GTNAC 1 cut(s) 444
MalI GATC 1 cut(s) 564
MboI GATC 1 cut(s) 562
MboII GAAGA 2 cut(s) 261, 335
MhlI GDGCHC 3 cut(s) 9, 163, 418
MluCI AATT 7 cut(s) 22, 125, 132, 138, 224, 481, 537
MmeI TCCRAC 1 cut(s) 367
MnlI CCTC 4 cut(s) 142, 192, 308, 584
MroXI GAANNNNTTC 1 cut(s) 265
MseI TTAA 1 cut(s) 128
MslI CAYNNNNRTG 1 cut(s) 369
MspR9I CCNGG 1 cut(s) 47
MvaI CCWGG 1 cut(s) 47
MwoI GCNNNNNNNGC 1 cut(s) 80
NdeII GATC 1 cut(s) 562
NlaIII CATG 2 cut(s) 92, 368
NlaIV GGNNCC 1 cut(s) 238
NmuCI GTSAC 1 cut(s) 444
PasI CCCWGGG 1 cut(s) 46
PdmI GAANNNNTTC 1 cut(s) 265
PfeI GAWTC 3 cut(s) 121, 390, 570
PkrI GCNGC 3 cut(s) 76, 79, 82
PsiI TTATAA 1 cut(s) 255
Psp124BI GAGCTC 3 cut(s) 9, 163, 418
Psp6I CCWGG 1 cut(s) 45
PspGI CCWGG 1 cut(s) 45
PspN4I GGNNCC 1 cut(s) 238
PstI CTGCAG 1 cut(s) 82
RsaI GTAC 3 cut(s) 30, 60, 307
RsaNI GTAC 3 cut(s) 29, 59, 306
RseI CAYNNNNRTG 1 cut(s) 369
SacI GAGCTC 3 cut(s) 9, 163, 418
SaqAI TTAA 1 cut(s) 128
SatI GCNGC 3 cut(s) 75, 78, 81
Sau3AI GATC 1 cut(s) 562
ScrFI CCNGG 1 cut(s) 47
SduI GDGCHC 3 cut(s) 9, 163, 418
SetI ASST 6 cut(s) 9, 85, 163, 267, 418, 439
SfaNI GCATC 2 cut(s) 50, 548
SfcI CTRYAG 2 cut(s) 78, 94
SmiMI CAYNNNNRTG 1 cut(s) 369
Sse9I AATT 7 cut(s) 22, 125, 132, 138, 224, 481, 537
SspMI CTAG 1 cut(s) 521
SstI GAGCTC 3 cut(s) 9, 163, 418
StyD4I CCNGG 1 cut(s) 45
StyI CCWWGG 3 cut(s) 232, 490, 553
TaaI ACNGT 1 cut(s) 250
TaqI TCGA 1 cut(s) 582
TasI AATT 7 cut(s) 22, 125, 132, 138, 224, 481, 537
TatI WGTACW 1 cut(s) 305
TfiI GAWTC 3 cut(s) 121, 390, 570
Tru1I TTAA 1 cut(s) 128
Tru9I TTAA 1 cut(s) 128
TscAI CASTG 1 cut(s) 453
TseFI GTSAC 1 cut(s) 444
TseI GCWGC 3 cut(s) 74, 77, 80
Tsp45I GTSAC 1 cut(s) 444
TspDTI ATGAA 4 cut(s) 42, 351, 448, 453
TspRI CASTG 1 cut(s) 453
XapI RAATTY 2 cut(s) 22, 138
XcmI CCANNNNNNNNNTGG 1 cut(s) 239
XmnI GAANNNNTTC 1 cut(s) 265
XspI CTAG 1 cut(s) 521
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.