RchiOBHm_Chr1g0333301

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000107
Physical Location & Seq
Forward (+)
25286708 .. 25288769
2062 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ56211

Sequence Viewer

Length: 1806 bp
ATGCAGCAGCTAATCCTCATCTCATCTTTTTGCATATTAATTTCAATGGCTTTCTTCAAAGTGTGCCATAATGCATGCACAGAATCAATGTGTGGTGACCATGATGATCATCGCCTTGCTATCCGTGTCCCGGTCAAGCGCCTTTCTCCTTGTCACAGACTTCAGCATCTTGGATGCGGTCAGCAGAGCGACAAGACGGTTAGTGAGCAGAAACAAATGCTAGTAAAATTCTTTGTCAAACACATAGATTATAAGCACCAGAAAATTCAAGTTCATGTCCCAGATGATTGCTTTCTCCTGACGCAATTAGAATACCAAAACGTGAAGCCAATCTCTCCTTTCACTGTCTCAGATTTTGGTAAGGGTAATCATGAGGAATTTCAAAATGTCAGCTTATTCAACTGTCCTACCCCAAGCACAGATATTTATCCACCAAGACAAGTTCCCTGCATCAGTGGCCTGGGCTACAAATATATATATGCTGTTTCTTCCGGGGACCAACCGCCACAAAGATGTACAAAGATGTATGATTTACAAGTTCCATATGGAACACTGTTTCTCGATTACTATATTTGGTCGTGGTCTACACCAAACTGTACAGAATGTGAAGCCAAGGGTAGGAAGTGTCATTTGAAGATCAACGGCACCAAAAGTGAAATTGAATGTGTTCATCTTAGCAAACCAAGTGCAACTCTGACTACAATCGTTCTATTAATATCGGTGGCTGTAATCTACAGCGTCTATAGCTCTGATAAAAAGGAAAAAGAGAATCAATTGAAAATTGAAAAATTCCTAGAGGATTACAAAGCGCTCAAGCCAAGCAGATATTCCTACGCAGATATTAAAAGAATTACAAATCAATTTGAGGATAAGTTGGGCGAAGGAGCGTATGGAACTGTTTTCAAAGGGAAGCTTTCATCTGAAGTTTTTGTTGCTGTTAAAGTCCTCAACAATTCCAAAAACGAAGATGGGGAAGAATTCATCAATGAGGTGGGAACAATGGGTCATATCCACCATGTCAACGTGGTTCGCATGGTCGGCTTCTGTGCTGAAGGATTTAGACGAGCTCTTATTTATGAGTTTTTCCCCAATGGTTCACTACAGGATTTCATTTCATCAGCAGACAGTAAGAACTCTTTCCTTGGTTGGGATAAGTTGCAAGATATTGCTCTAGGCATTGCCAAAGGAATTGAATATCTACACCAAGGATGCGATCAACGAATCCTTCATTTTGATATTAAACCTCACAACGTATTGCTAGATCAAAACTTCACTCCAAAAGTTTCTGATTTTGGGATGTCCAAGTTGTGTGCCAAGGATCAAAGTATAGTGTCAATAACTACGGCTAGGGGGACTATGGGATATATTGCACCTGAAGTGTTCTCCCGGAATTTTGGAAATGTGTCATATAAGTCAGATGTATATAGTTTTGGAATGTTGTTGCTCGAGATTGTAGGAGGGAGGAAGAATATTGGTAAAACCATGGGCAACGCTGGTGAAGTGTACTACCCAGAATGGATATATAATCTTTTAGAAGAAGGGGAGGACCTTCGAGTCCATTTTGGGGAAGAAGGATTAGATTCTCGAATTCCCAAAGAACTGGCAATTGTAGGCCTTTGGTGTATCCAATGGCACCCAATGGATCGTCCATCCATGAAATCAGTGGTTCAGATGTTGGGAGGAAGAGAAAACTTAACTATGCCGCCGAATCCTTTTGCTGCTACTGGTGCTACTAGAACAAATGCAATAAGTCGCCCGACTGCAAGACGCTTGAACCTTGAGCTAGAAGCAATTGTTGAAGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase

Protein Analysis

601

Amino Acids

67.94

Weight (kDa)

6.83

Isoelectric Point (pI)

41.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 287 - 559 8.3e-46 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 288 - 557 1.3e-45 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 252
AasI GACNNNNNNGTC 1 cut(s) 1553
AccB1I GGYRCC 2 cut(s) 644, 1632
AccI GTMKAC 1 cut(s) 584
AciI CCGC 3 cut(s) 177, 503, 1703
AclWI GGATC 2 cut(s) 1326, 1650
AcsI RAATTY 7 cut(s) 227, 264, 377, 788, 977, 1390, 1587
AcuI CTGAAG 4 cut(s) 146, 942, 1071, 1395
AfaI GTAC 3 cut(s) 517, 598, 1505
AfeI AGCGCT 1 cut(s) 810
AfiI CCNNNNNNNGG 4 cut(s) 130, 618, 1147, 1564
AjnI CCWGG 1 cut(s) 459
AjuI GAANNNNNNNTTGG 2 cut(s) 811, 843
AluBI AGCT 6 cut(s) 10, 393, 747, 913, 1067, 1783
AluI AGCT 6 cut(s) 10, 393, 747, 913, 1067, 1783
Alw21I GWGCWC 1 cut(s) 1069
Alw26I GTCTC 1 cut(s) 352
AlwI GGATC 2 cut(s) 1326, 1650
Ama87I CYCGRG 1 cut(s) 1445
Aor51HI AGCGCT 1 cut(s) 810
AoxI GGCC 2 cut(s) 457, 1612
ApeKI GCWGC 3 cut(s) 4, 7, 1718
ApoI RAATTY 7 cut(s) 227, 264, 377, 788, 977, 1390, 1587
AseI ATTAAT 2 cut(s) 38, 713
Asp700I GAANNNNTTC 2 cut(s) 666, 1136
AspLEI GCGC 2 cut(s) 141, 811
AspS9I GGNCC 2 cut(s) 496, 1546
AsuC2I CCSGG 3 cut(s) 131, 493, 1387
AsuHPI GGTGA 2 cut(s) 107, 1508
AvaI CYCGRG 1 cut(s) 1445
AvaII GGWCC 2 cut(s) 496, 1546
BanI GGYRCC 2 cut(s) 644, 1632
BanII GRGCYC 1 cut(s) 1069
Bbv12I GWGCWC 1 cut(s) 1069
BbvI GCAGC 3 cut(s) 16, 19, 1705
BccI CCATC 2 cut(s) 962, 1657
BceAI ACGGC 2 cut(s) 658, 1359
BciT130I CCWGG 1 cut(s) 461
BciVI GTATCC 1 cut(s) 1634
BclI TGATCA 1 cut(s) 106
BcnI CCSGG 3 cut(s) 131, 493, 1387
BcoDI GTCTC 1 cut(s) 352
BfaI CTAG 7 cut(s) 221, 794, 1172, 1259, 1347, 1734, 1784
BfmI CTRYAG 3 cut(s) 733, 742, 1100
BfoI RGCGCY 2 cut(s) 142, 812
BfuI GTATCC 1 cut(s) 1634
BisI GCNGC 4 cut(s) 5, 8, 1703, 1719
BlsI GCNGC 4 cut(s) 6, 9, 1704, 1720
Bme1390I CCNGG 4 cut(s) 131, 461, 493, 1387
Bme18I GGWCC 2 cut(s) 496, 1546
BmeT110I CYCGRG 1 cut(s) 1445
BmgT120I GGNCC 2 cut(s) 496, 1546
BmiI GGNNCC 3 cut(s) 497, 646, 1634
BmrFI CCNGG 4 cut(s) 131, 461, 493, 1387
BmsI GCATC 4 cut(s) 164, 175, 459, 1199
BpuEI CTTGAG 2 cut(s) 797, 1799
BpuMI CCSGG 3 cut(s) 131, 493, 1387
BsaBI GATNNNNATC 2 cut(s) 108, 426
BsaJI CCNNGG 7 cut(s) 460, 492, 612, 1141, 1204, 1314, 1482
Bsc4I CCNNNNNNNGG 4 cut(s) 130, 618, 1147, 1564
Bse1I ACTGG 2 cut(s) 1605, 1729
Bse3DI GCAATG 1 cut(s) 1176
Bse8I GATNNNNATC 2 cut(s) 108, 426
BseBI CCWGG 1 cut(s) 461
BseDI CCNNGG 7 cut(s) 460, 492, 612, 1141, 1204, 1314, 1482
BseGI GGATG 4 cut(s) 179, 1214, 1302, 1649
BseJI GATNNNNATC 2 cut(s) 108, 426
BseLI CCNNNNNNNGG 4 cut(s) 130, 618, 1147, 1564
BseMI GCAATG 1 cut(s) 1176
BseMII CTCAG 1 cut(s) 363
BseNI ACTGG 2 cut(s) 1605, 1729
BseXI GCAGC 3 cut(s) 16, 19, 1705
BshFI GGCC 2 cut(s) 459, 1614
BshNI GGYRCC 2 cut(s) 644, 1632
BsiHKAI GWGCWC 1 cut(s) 1069
BsiHKCI CYCGRG 1 cut(s) 1445
BsiSI CCGG 3 cut(s) 131, 492, 1387
BslFI GGGAC 4 cut(s) 113, 263, 509, 1366
BslI CCNNNNNNNGG 4 cut(s) 130, 618, 1147, 1564
BsmAI GTCTC 1 cut(s) 352
BsmFI GGGAC 4 cut(s) 113, 263, 509, 1366
BsnI GGCC 2 cut(s) 459, 1614
BsoBI CYCGRG 1 cut(s) 1445
Bsp1286I GDGCHC 1 cut(s) 1069
Bsp1407I TGTACA 2 cut(s) 515, 596
Bsp143I GATC 6 cut(s) 106, 636, 1213, 1261, 1318, 1642
Bsp19I CCATGG 1 cut(s) 1482
BspACI CCGC 3 cut(s) 177, 503, 1703
BspANI GGCC 2 cut(s) 459, 1614
BspCNI CTCAG 1 cut(s) 362
BspHI TCATGA 1 cut(s) 370
BspLI GGNNCC 3 cut(s) 497, 646, 1634
BspPI GGATC 2 cut(s) 1326, 1650
BspT107I GGYRCC 2 cut(s) 644, 1632
BsrDI GCAATG 1 cut(s) 1176
BsrGI TGTACA 2 cut(s) 515, 596
BsrI ACTGG 2 cut(s) 1605, 1729
BssECI CCNNGG 7 cut(s) 460, 492, 612, 1141, 1204, 1314, 1482
BssMI GATC 6 cut(s) 106, 636, 1213, 1261, 1318, 1642
BssT1I CCWWGG 5 cut(s) 612, 1141, 1204, 1314, 1482
Bst2UI CCWGG 1 cut(s) 461
Bst4CI ACNGT 7 cut(s) 199, 346, 404, 555, 596, 898, 1127
Bst6I CTCTTC 2 cut(s) 1678, 1794
BstAUI TGTACA 2 cut(s) 515, 596
BstC8I GCNNGC 1 cut(s) 76
BstDEI CTNAG 2 cut(s) 349, 674
BstDSI CCRYGG 1 cut(s) 1482
BstEII GGTNACC 1 cut(s) 95
BstF5I GGATG 4 cut(s) 179, 1214, 1302, 1649
BstH2I RGCGCY 2 cut(s) 142, 812
BstHHI GCGC 2 cut(s) 141, 811
BstKTI GATC 6 cut(s) 109, 639, 1216, 1264, 1321, 1645
BstMAI GTCTC 1 cut(s) 352
BstMBI GATC 6 cut(s) 106, 636, 1213, 1261, 1318, 1642
BstMWI GCNNNNNNNGC 4 cut(s) 456, 744, 1038, 1727
BstNI CCWGG 1 cut(s) 461
BstNSI RCATGY 1 cut(s) 78
BstPI GGTNACC 1 cut(s) 95
BstSCI CCNGG 4 cut(s) 129, 459, 491, 1385
BstSFI CTRYAG 3 cut(s) 733, 742, 1100
BstV1I GCAGC 3 cut(s) 16, 19, 1705
BstXI CCANNNNNNTGG 1 cut(s) 1600
BsuI GTATCC 1 cut(s) 1634
BsuRI GGCC 2 cut(s) 459, 1614
BtgI CCRYGG 1 cut(s) 1482
BtgZI GCGATG 1 cut(s) 95
BtsCI GGATG 4 cut(s) 179, 1214, 1302, 1649
BtsIMutI CAGTG 4 cut(s) 342, 460, 551, 1668
Cac8I GCNNGC 1 cut(s) 76
CciI TCATGA 1 cut(s) 370
CfoI GCGC 2 cut(s) 141, 811
Cfr13I GGNCC 2 cut(s) 496, 1546
CseI GACGC 3 cut(s) 310, 727, 1776
Csp6I GTAC 3 cut(s) 516, 597, 1504
CviAII CATG 8 cut(s) 75, 101, 275, 371, 1016, 1033, 1483, 1654
CviQI GTAC 3 cut(s) 516, 597, 1504
DdeI CTNAG 2 cut(s) 349, 674
DpnI GATC 6 cut(s) 108, 638, 1215, 1263, 1320, 1644
DpnII GATC 6 cut(s) 106, 636, 1213, 1261, 1318, 1642
DrdI GACNNNNNNGTC 1 cut(s) 1553
DseDI GACNNNNNNGTC 1 cut(s) 1553
Eam1104I CTCTTC 2 cut(s) 1678, 1794
EarI CTCTTC 2 cut(s) 1678, 1794
Ecl136II GAGCTC 1 cut(s) 1067
Eco130I CCWWGG 5 cut(s) 612, 1141, 1204, 1314, 1482
Eco147I AGGCCT 1 cut(s) 1614
Eco24I GRGCYC 1 cut(s) 1069
Eco47I GGWCC 2 cut(s) 496, 1546
Eco47III AGCGCT 1 cut(s) 810
Eco53kI GAGCTC 1 cut(s) 1067
Eco57I CTGAAG 4 cut(s) 146, 942, 1071, 1395
Eco88I CYCGRG 1 cut(s) 1445
Eco91I GGTNACC 1 cut(s) 95
EcoICRI GAGCTC 1 cut(s) 1067
EcoO109I RGGNCCY 1 cut(s) 1546
EcoO65I GGTNACC 1 cut(s) 95
EcoRI GAATTC 2 cut(s) 977, 1587
EcoRII CCWGG 1 cut(s) 459
EcoT14I CCWWGG 5 cut(s) 612, 1141, 1204, 1314, 1482
EcoT22I ATGCAT 1 cut(s) 76
EcoT38I GRGCYC 1 cut(s) 1069
ErhI CCWWGG 5 cut(s) 612, 1141, 1204, 1314, 1482
FaeI CATG 8 cut(s) 78, 104, 278, 374, 1019, 1036, 1486, 1657
FalI AAGNNNNNCTT 2 cut(s) 897, 929
FaqI GGGAC 4 cut(s) 113, 263, 509, 1366
FatI CATG 8 cut(s) 74, 100, 274, 370, 1015, 1032, 1482, 1653
FauNDI CATATG 1 cut(s) 544
FbaI TGATCA 1 cut(s) 106
FblI GTMKAC 1 cut(s) 584
Fnu4HI GCNGC 4 cut(s) 5, 8, 1703, 1719
FokI GGATG 4 cut(s) 186, 1221, 1309, 1636
FriOI GRGCYC 1 cut(s) 1069
Fsp4HI GCNGC 4 cut(s) 5, 8, 1703, 1719
FspBI CTAG 7 cut(s) 221, 794, 1172, 1259, 1347, 1734, 1784
GlaI GCGC 2 cut(s) 140, 810
GluI GCNGC 4 cut(s) 5, 8, 1703, 1719
HaeII RGCGCY 2 cut(s) 142, 812
HaeIII GGCC 2 cut(s) 459, 1614
HapII CCGG 3 cut(s) 131, 492, 1387
HgaI GACGC 3 cut(s) 310, 727, 1776
HhaI GCGC 2 cut(s) 141, 811
Hin1II CATG 8 cut(s) 78, 104, 278, 374, 1019, 1036, 1486, 1657
Hin6I GCGC 2 cut(s) 139, 809
HinP1I GCGC 2 cut(s) 139, 809
HincII GTYRAC 1 cut(s) 1021
HindII GTYRAC 1 cut(s) 1021
HindIII AAGCTT 1 cut(s) 911
HinfI GANTC 6 cut(s) 83, 769, 1221, 1554, 1580, 1708
HpaII CCGG 3 cut(s) 131, 492, 1387
HphI GGTGA 2 cut(s) 107, 1508
Hpy166II GTNNAC 4 cut(s) 585, 1021, 1097, 1504
Hpy188I TCNGA 7 cut(s) 352, 696, 751, 922, 1288, 1417, 1671
Hpy188III TCNNGA 5 cut(s) 298, 371, 560, 1447, 1584
Hpy8I GTNNAC 4 cut(s) 585, 1021, 1097, 1504
HpyAV CCTTC 6 cut(s) 875, 1046, 1235, 1532, 1559, 1565
HpyCH4III ACNGT 7 cut(s) 199, 346, 404, 555, 596, 898, 1127
HpyCH4IV ACGT 3 cut(s) 321, 1023, 1251
HpyF10VI GCNNNNNNNGC 4 cut(s) 456, 744, 1038, 1727
HpyF3I CTNAG 2 cut(s) 349, 674
HpySE526I ACGT 3 cut(s) 321, 1023, 1251
Hsp92II CATG 8 cut(s) 78, 104, 278, 374, 1019, 1036, 1486, 1657
HspAI GCGC 2 cut(s) 139, 809
Ksp22I TGATCA 1 cut(s) 106
Kzo9I GATC 6 cut(s) 106, 636, 1213, 1261, 1318, 1642
LmnI GCTCC 1 cut(s) 884
Lsp1109I GCAGC 3 cut(s) 16, 19, 1705
LweI GCATC 4 cut(s) 164, 175, 459, 1199
MaeI CTAG 7 cut(s) 221, 794, 1172, 1259, 1347, 1734, 1784
MaeII ACGT 3 cut(s) 321, 1023, 1251
MaeIII GTNAC 2 cut(s) 95, 152
MalI GATC 6 cut(s) 108, 638, 1215, 1263, 1320, 1644
MboI GATC 6 cut(s) 106, 636, 1213, 1261, 1318, 1642
MboII GAAGA 9 cut(s) 46, 480, 646, 977, 986, 1477, 1547, 1580, 1695
MfeI CAATTG 3 cut(s) 773, 1605, 1791
MhlI GDGCHC 1 cut(s) 1069
MlyI GAGTC 1 cut(s) 1563
Mph1103I ATGCAT 1 cut(s) 76
MroXI GAANNNNTTC 2 cut(s) 666, 1136
MseI TTAA 6 cut(s) 38, 713, 843, 939, 1239, 1694
MslI CAYNNNNRTG 1 cut(s) 511
MspI CCGG 3 cut(s) 131, 492, 1387
MspR9I CCNGG 4 cut(s) 131, 461, 493, 1387
MunI CAATTG 3 cut(s) 773, 1605, 1791
MvaI CCWGG 1 cut(s) 461
MwoI GCNNNNNNNGC 4 cut(s) 456, 744, 1038, 1727
NciI CCSGG 3 cut(s) 131, 493, 1387
NcoI CCATGG 1 cut(s) 1482
NdeI CATATG 1 cut(s) 544
NdeII GATC 6 cut(s) 106, 636, 1213, 1261, 1318, 1642
NlaIII CATG 8 cut(s) 78, 104, 278, 374, 1019, 1036, 1486, 1657
NlaIV GGNNCC 3 cut(s) 497, 646, 1634
NmuCI GTSAC 2 cut(s) 95, 152
NsiI ATGCAT 1 cut(s) 76
NspI RCATGY 1 cut(s) 78
PaeI GCATGC 1 cut(s) 78
PaeR7I CTCGAG 1 cut(s) 1445
PagI TCATGA 1 cut(s) 370
PceI AGGCCT 1 cut(s) 1614
PdmI GAANNNNTTC 2 cut(s) 666, 1136
PfeI GAWTC 5 cut(s) 83, 769, 1221, 1580, 1708
PfoI TCCNGGA 1 cut(s) 1385
PkrI GCNGC 4 cut(s) 6, 9, 1704, 1720
PleI GAGTC 1 cut(s) 1562
PpsI GAGTC 1 cut(s) 1562
PpuMI RGGWCCY 1 cut(s) 1546
PshBI ATTAAT 2 cut(s) 38, 713
PsiI TTATAA 1 cut(s) 252
Psp124BI GAGCTC 1 cut(s) 1069
Psp5II RGGWCCY 1 cut(s) 1546
Psp6I CCWGG 1 cut(s) 459
PspEI GGTNACC 1 cut(s) 95
PspGI CCWGG 1 cut(s) 459
PspN4I GGNNCC 3 cut(s) 497, 646, 1634
PspPI GGNCC 2 cut(s) 496, 1546
PspPPI RGGWCCY 1 cut(s) 1546
RsaI GTAC 3 cut(s) 517, 598, 1505
RsaNI GTAC 3 cut(s) 516, 597, 1504
RseI CAYNNNNRTG 1 cut(s) 511
SacI GAGCTC 1 cut(s) 1069
SaqAI TTAA 6 cut(s) 38, 713, 843, 939, 1239, 1694
SatI GCNGC 4 cut(s) 5, 8, 1703, 1719
Sau3AI GATC 6 cut(s) 106, 636, 1213, 1261, 1318, 1642
Sau96I GGNCC 2 cut(s) 496, 1546
SchI GAGTC 1 cut(s) 1563
ScrFI CCNGG 4 cut(s) 131, 461, 493, 1387
SduI GDGCHC 1 cut(s) 1069
SfaNI GCATC 4 cut(s) 164, 175, 459, 1199
SfcI CTRYAG 3 cut(s) 733, 742, 1100
Sfr274I CTCGAG 1 cut(s) 1445
SinI GGWCC 2 cut(s) 496, 1546
SlaI CTCGAG 1 cut(s) 1445
SmiMI CAYNNNNRTG 1 cut(s) 511
SmlI CTYRAG 3 cut(s) 812, 1445, 1778
SmoI CTYRAG 3 cut(s) 812, 1445, 1778
SphI GCATGC 1 cut(s) 78
SseBI AGGCCT 1 cut(s) 1614
SsiI CCGC 3 cut(s) 177, 503, 1703
SspI AATATT 1 cut(s) 1471
SspMI CTAG 7 cut(s) 221, 794, 1172, 1259, 1347, 1734, 1784
SstI GAGCTC 1 cut(s) 1069
StuI AGGCCT 1 cut(s) 1614
StyD4I CCNGG 4 cut(s) 129, 459, 491, 1385
StyI CCWWGG 5 cut(s) 612, 1141, 1204, 1314, 1482
TaaI ACNGT 7 cut(s) 199, 346, 404, 555, 596, 898, 1127
TaiI ACGT 3 cut(s) 324, 1026, 1254
TaqI TCGA 4 cut(s) 561, 1446, 1552, 1585
TatI WGTACW 3 cut(s) 515, 596, 1503
TauI GCSGC 1 cut(s) 1705
TfiI GAWTC 5 cut(s) 83, 769, 1221, 1580, 1708
Tru1I TTAA 6 cut(s) 38, 713, 843, 939, 1239, 1694
Tru9I TTAA 6 cut(s) 38, 713, 843, 939, 1239, 1694
TscAI CASTG 4 cut(s) 349, 460, 558, 1668
TseFI GTSAC 2 cut(s) 95, 152
TseI GCWGC 3 cut(s) 4, 7, 1718
Tsp45I GTSAC 2 cut(s) 95, 152
TspDTI ATGAA 8 cut(s) 263, 659, 906, 970, 1099, 1104, 1217, 1670
TspGWI ACGGA 1 cut(s) 113
TspRI CASTG 4 cut(s) 349, 460, 558, 1668
VpaK11BI GGWCC 2 cut(s) 496, 1546
VspI ATTAAT 2 cut(s) 38, 713
XapI RAATTY 7 cut(s) 227, 264, 377, 788, 977, 1390, 1587
XceI RCATGY 1 cut(s) 78
XcmI CCANNNNNNNNNTGG 1 cut(s) 1660
XhoI CTCGAG 1 cut(s) 1445
XmiI GTMKAC 1 cut(s) 584
XmnI GAANNNNTTC 2 cut(s) 666, 1136
XspI CTAG 7 cut(s) 221, 794, 1172, 1259, 1347, 1734, 1784
Zsp2I ATGCAT 1 cut(s) 76
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.