MD02G1249400.v1.1

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0000107
Physical Location & Seq
Forward (+)
29989416 .. 29991352
1937 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1249400.v1.1.491

Sequence Viewer

Length: 1794 bp
ATGCAGAAATTGTTCATCTCTTCCTTTTGCATATTGTTGCTGGTTTTCTTCAAACGAGTTGGAGCAAGCCAATATGTGTGCCCGGAATCCGAGTGTGGTGATGATCAAGGCCCGGCTATCCATTTCCCCTTACGCATCAGCCGCACACATCATTGTGGAAATCCTGGGCTTGAATGCAATGGGAGATATGAGCAGCAAATATTAGTAAAATTATTTATCAAACAGATAGATTACAAGCGTCAGGAAATCCAAGTGCATCCCCCAAGCAACTGCCTGCTGCTAAAGCCCGTCGAAATCACAAACGTGCCACCCTCTCCCTTCTACTTGTCAAATTTTAGCATCAGTAACGTTACCTTATTCAGTTGTCCTACTGTTGCAAGAGTTACGTATGCGTATCAAGACCCCTGCCTAGGTGACCCTGGCCGCAGAATTTATGCCATTGATTCAAAACATCAATTAGAATATCTCTTCCAGAATCTACAATCTTGTTCAAAGATGTATGATGTTTTATCAGTTCCATTTGGCTATTGGAAGGGTAATGGCTATATTCTTCAATTCAAATGGTCGAAACCAAATTGTACAGAATGTGAAGCACAGGGAAAGAGGTGTAGATGGAACAACAATGGCACCAACAGTGAAATTGAATGTCAACACGTGAGGAAACCAAGCAACACATGGAAATTAGTGGTTACAGGTGGAATCCTCGGTGCTTTGCTACTTGTTCTACTGATGATTGCAGCATTTCGGGTATACAGCGCTGATAGGAAGGAAAAAGAGAGTCAATTAAGAATTGAAAGATTCTTGGAGGATTACAAAGCACTCAAACCAAGCAGGTATTCGTATGCAGATATTAAGAGGATTACAAATCAATTCAAGGACAAGTTGGGCGAAGGAGCCTATGGAACTGTCTTCAAAGGAATGCTCTCTTCTGAATTCTTTATTGCTGTCAAAGTCCTCAACAGTTCTAAGGGAGATGGGGAAGAGTTCATAAACGAAGTGCGAACGATGGGTCATATCCACCACGTCAACGTGGCTCGCTTGGTTGGATTTTGTGCTGATGGATTTATACGAGCTCTTGTTTACGAGTTCTTCCCCAACGGTTCCCTGCAGGATTTCATTTCATCCGCAGGTAGTAAGAATTCCTTTCTTGGTTGGGATAAGCTGCAAGATATTGCCCTAGGCATAGCCAAAGGAATTGAATACCTTCACCAGGGATGTGATCTACGAATCCTGCATTTCGATATCAAACCCCATAACGTGTTGCTAGACCAAAACTTCACTCCAAAAATTTCTGATTTTGGTTTGGCCAAGTTATGTTCCAAGGATCAAAGCTTGGTGTCCATGACTACAGCGAGGGGGACCATTGGCTACATTGCACCTGAAGTGTTCTCCAGGAATTTCGGAAATGTGTCTTACAAGGCAGATGTTTATAGCTTTGGAATGCTGCTGCTTGAGATGGTAGGAGGAAGGAAGAATATTGGTGTAACCATAGATAACAATACAGATGAAATTTACCATCCACAGTGGATTTATAATCTTCTAGAGGAAGGGGATGACCTACGAATCCATATTGGGGAAGAAGAAGATGGTAAAATTCCAAAGAAACTTGCAATTATAGGGTTATGGTGTATCCAATGGCACCCGTCGGATCGTCCTTCCATGAAAACAGCGGTTCAAATGTTAGAAGGAGGAGGAGAAAGCTTGACTGTGCCGCCTAATCCCTTCATGCCTACAGGTCCTACAACTAGAAATGTAAGACGCCTAGAGCTAGAAGCAATTGCTGAATTAGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase Pkinase_Tyr

Protein Analysis

598

Amino Acids

67.48

Weight (kDa)

7.8

Isoelectric Point (pI)

44.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 27 - 85 1e-06 Wall-associated receptor kinase galacturonan-binding
PK_Tyr_Ser-Thr PF07714 290 - 560 4.1e-43 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 291 - 559 1.6e-45 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1533
Acc36I ACCTGC 2 cut(s) 822, 1118
AccB1I GGYRCC 2 cut(s) 626, 1638
AccI GTMKAC 1 cut(s) 750
AciI CCGC 5 cut(s) 142, 424, 1125, 1670, 1712
AclI AACGTT 1 cut(s) 348
AclWI GGATC 2 cut(s) 1332, 1656
AcoI YGGCCR 2 cut(s) 421, 1305
AcsI RAATTY 8 cut(s) 331, 429, 932, 1138, 1287, 1396, 1509, 1593
AcuI CTGAAG 1 cut(s) 1401
AcvI CACGTG 1 cut(s) 655
AcyI GRCGYC 1 cut(s) 1759
AfaI GTAC 1 cut(s) 580
AfeI AGCGCT 1 cut(s) 757
AfiI CCNNNNNNNGG 3 cut(s) 410, 1210, 1573
AflIII ACRYGT 2 cut(s) 652, 1257
AjiI CACGTC 1 cut(s) 1024
AjnI CCWGG 4 cut(s) 163, 418, 1209, 1391
AjuI GAANNNNNNNTTGG 2 cut(s) 820, 852
AleI CACNNNNGTG 1 cut(s) 302
AluBI AGCT 6 cut(s) 1073, 1162, 1332, 1434, 1701, 1768
AluI AGCT 6 cut(s) 1073, 1162, 1332, 1434, 1701, 1768
Alw21I GWGCWC 1 cut(s) 1075
AlwI GGATC 2 cut(s) 1332, 1656
Aor51HI AGCGCT 1 cut(s) 757
AoxI GGCC 3 cut(s) 109, 421, 1305
ApeKI GCWGC 6 cut(s) 193, 277, 737, 1162, 1444, 1447
ApoI RAATTY 8 cut(s) 331, 429, 932, 1138, 1287, 1396, 1509, 1593
ArsI GACNNNNNNTTYG 2 cut(s) 994, 1026
Asp700I GAANNNNTTC 2 cut(s) 11, 1203
AspA2I CCTAGG 2 cut(s) 409, 1177
AspLEI GCGC 1 cut(s) 758
AspS9I GGNCC 3 cut(s) 110, 1359, 1736
AsuC2I CCSGG 2 cut(s) 83, 113
AsuHPI GGTGA 3 cut(s) 110, 425, 1199
AvaII GGWCC 2 cut(s) 1359, 1736
AvrII CCTAGG 2 cut(s) 409, 1177
BaeGI GKGCMC 1 cut(s) 83
BalI TGGCCA 1 cut(s) 1307
BanI GGYRCC 2 cut(s) 626, 1638
BanII GRGCYC 1 cut(s) 1075
BbrPI CACGTG 1 cut(s) 655
BbsI GAAGAC 1 cut(s) 901
Bbv12I GWGCWC 1 cut(s) 1075
BbvI GCAGC 6 cut(s) 205, 264, 749, 1149, 1431, 1434
BccI CCATC 7 cut(s) 606, 968, 1000, 1052, 1450, 1524, 1580
BciT130I CCWGG 4 cut(s) 165, 420, 1211, 1393
BciVI GTATCC 1 cut(s) 1640
BclI TGATCA 1 cut(s) 103
BcnI CCSGG 2 cut(s) 83, 113
BfaI CTAG 7 cut(s) 410, 1178, 1265, 1541, 1746, 1763, 1769
BfmI CTRYAG 3 cut(s) 1106, 1347, 1731
BfoI RGCGCY 1 cut(s) 759
BfuAI ACCTGC 2 cut(s) 822, 1118
BfuI GTATCC 1 cut(s) 1640
BisI GCNGC 9 cut(s) 142, 194, 278, 424, 738, 1163, 1445, 1448, 1712
BlnI CCTAGG 2 cut(s) 409, 1177
BlsI GCNGC 9 cut(s) 143, 195, 279, 425, 739, 1164, 1446, 1449, 1713
Bme1390I CCNGG 6 cut(s) 83, 113, 165, 420, 1211, 1393
Bme18I GGWCC 2 cut(s) 1359, 1736
BmgBI CACGTC 1 cut(s) 1024
BmgT120I GGNCC 3 cut(s) 110, 1359, 1736
BmiI GGNNCC 5 cut(s) 628, 895, 1102, 1360, 1640
BmrFI CCNGG 6 cut(s) 83, 113, 165, 420, 1211, 1393
BmsI GCATC 3 cut(s) 144, 265, 348
BpiI GAAGAC 1 cut(s) 901
BpmI CTGGAG 1 cut(s) 1375
BpuEI CTTGAG 1 cut(s) 1472
BpuMI CCSGG 2 cut(s) 83, 113
BsaAI YACGTR 2 cut(s) 387, 655
BsaHI GRCGYC 1 cut(s) 1759
BsaJI CCNNGG 7 cut(s) 164, 409, 418, 703, 1177, 1210, 1320
Bsc4I CCNNNNNNNGG 3 cut(s) 410, 1210, 1573
Bse3DI GCAATG 2 cut(s) 184, 1371
BseBI CCWGG 4 cut(s) 165, 420, 1211, 1393
BseDI CCNNGG 7 cut(s) 164, 409, 418, 703, 1177, 1210, 1320
BseGI GGATG 5 cut(s) 256, 1121, 1220, 1516, 1558
BseLI CCNNNNNNNGG 3 cut(s) 410, 1210, 1573
BseMI GCAATG 2 cut(s) 184, 1371
BseRI GAGGAG 2 cut(s) 1704, 1707
BseSI GKGCMC 1 cut(s) 83
BseXI GCAGC 6 cut(s) 205, 264, 749, 1149, 1431, 1434
BshFI GGCC 3 cut(s) 111, 423, 1307
BshNI GGYRCC 2 cut(s) 626, 1638
BsiHKAI GWGCWC 1 cut(s) 1075
BsiSI CCGG 2 cut(s) 83, 113
BslFI GGGAC 1 cut(s) 1372
BslI CCNNNNNNNGG 3 cut(s) 410, 1210, 1573
BsmFI GGGAC 1 cut(s) 1372
BsmI GAATGC 3 cut(s) 179, 924, 1446
BsnI GGCC 3 cut(s) 111, 423, 1307
Bsp1286I GDGCHC 2 cut(s) 83, 1075
Bsp1407I TGTACA 1 cut(s) 578
Bsp143I GATC 4 cut(s) 103, 1219, 1324, 1648
BspACI CCGC 5 cut(s) 142, 424, 1125, 1670, 1712
BspANI GGCC 3 cut(s) 111, 423, 1307
BspLI GGNNCC 5 cut(s) 628, 895, 1102, 1360, 1640
BspMAI CTGCAG 1 cut(s) 1110
BspMI ACCTGC 2 cut(s) 822, 1118
BspPI GGATC 2 cut(s) 1332, 1656
BspT107I GGYRCC 2 cut(s) 626, 1638
BsrDI GCAATG 2 cut(s) 184, 1371
BsrGI TGTACA 1 cut(s) 578
BssECI CCNNGG 7 cut(s) 164, 409, 418, 703, 1177, 1210, 1320
BssMI GATC 4 cut(s) 103, 1219, 1324, 1648
BssNAI GTATAC 1 cut(s) 751
BssNI GRCGYC 1 cut(s) 1759
BssT1I CCWWGG 3 cut(s) 409, 1177, 1320
Bst1107I GTATAC 1 cut(s) 751
Bst2UI CCWGG 4 cut(s) 165, 420, 1211, 1393
Bst4CI ACNGT 7 cut(s) 373, 635, 907, 962, 1100, 1524, 1708
Bst6I CTCTTC 4 cut(s) 25, 473, 931, 975
BstACI GRCGYC 1 cut(s) 1759
BstAUI TGTACA 1 cut(s) 578
BstBAI YACGTR 2 cut(s) 387, 655
BstC8I GCNNGC 3 cut(s) 67, 275, 1036
BstDEI CTNAG 1 cut(s) 966
BstEII GGTNACC 1 cut(s) 413
BstENI CCTNNNNNAGG 1 cut(s) 1208
BstF5I GGATG 5 cut(s) 256, 1121, 1220, 1516, 1558
BstH2I RGCGCY 1 cut(s) 759
BstHHI GCGC 1 cut(s) 758
BstKTI GATC 4 cut(s) 106, 1222, 1327, 1651
BstMBI GATC 4 cut(s) 103, 1219, 1324, 1648
BstMWI GCNNNNNNNGC 2 cut(s) 141, 283
BstNI CCWGG 4 cut(s) 165, 420, 1211, 1393
BstPI GGTNACC 1 cut(s) 413
BstSCI CCNGG 6 cut(s) 81, 111, 163, 418, 1209, 1391
BstSFI CTRYAG 3 cut(s) 1106, 1347, 1731
BstSLI GKGCMC 1 cut(s) 83
BstSNI TACGTA 1 cut(s) 387
BstV1I GCAGC 6 cut(s) 205, 264, 749, 1149, 1431, 1434
BstV2I GAAGAC 1 cut(s) 901
BstZ17I GTATAC 1 cut(s) 751
BsuI GTATCC 1 cut(s) 1640
BsuRI GGCC 3 cut(s) 111, 423, 1307
BtrI CACGTC 1 cut(s) 1024
BtsCI GGATG 5 cut(s) 256, 1121, 1220, 1516, 1558
BtsIMutI CAGTG 2 cut(s) 640, 1529
BveI ACCTGC 2 cut(s) 822, 1118
Cac8I GCNNGC 3 cut(s) 67, 275, 1036
CfoI GCGC 1 cut(s) 758
Cfr13I GGNCC 3 cut(s) 110, 1359, 1736
CseI GACGC 2 cut(s) 227, 1767
Csp6I GTAC 1 cut(s) 579
CviAII CATG 4 cut(s) 675, 1342, 1660, 1726
CviQI GTAC 1 cut(s) 579
DdeI CTNAG 1 cut(s) 966
DpnI GATC 4 cut(s) 105, 1221, 1326, 1650
DpnII GATC 4 cut(s) 103, 1219, 1324, 1648
EaeI YGGCCR 2 cut(s) 421, 1305
Eam1104I CTCTTC 4 cut(s) 25, 473, 931, 975
EarI CTCTTC 4 cut(s) 25, 473, 931, 975
Ecl136II GAGCTC 1 cut(s) 1073
Eco105I TACGTA 1 cut(s) 387
Eco130I CCWWGG 3 cut(s) 409, 1177, 1320
Eco24I GRGCYC 1 cut(s) 1075
Eco32I GATATC 1 cut(s) 1243
Eco47I GGWCC 2 cut(s) 1359, 1736
Eco47III AGCGCT 1 cut(s) 757
Eco53kI GAGCTC 1 cut(s) 1073
Eco57I CTGAAG 1 cut(s) 1401
Eco72I CACGTG 1 cut(s) 655
Eco91I GGTNACC 1 cut(s) 413
EcoICRI GAGCTC 1 cut(s) 1073
EcoNI CCTNNNNNAGG 1 cut(s) 1208
EcoO109I RGGNCCY 1 cut(s) 1736
EcoO65I GGTNACC 1 cut(s) 413
EcoRI GAATTC 2 cut(s) 932, 1138
EcoRII CCWGG 4 cut(s) 163, 418, 1209, 1391
EcoRV GATATC 1 cut(s) 1243
EcoT14I CCWWGG 3 cut(s) 409, 1177, 1320
EcoT38I GRGCYC 1 cut(s) 1075
ErhI CCWWGG 3 cut(s) 409, 1177, 1320
FaeI CATG 4 cut(s) 678, 1345, 1663, 1729
FalI AAGNNNNNCTT 2 cut(s) 1127, 1159
FaqI GGGAC 1 cut(s) 1372
FatI CATG 4 cut(s) 674, 1341, 1659, 1725
FbaI TGATCA 1 cut(s) 103
FblI GTMKAC 1 cut(s) 750
Fnu4HI GCNGC 9 cut(s) 142, 194, 278, 424, 738, 1163, 1445, 1448, 1712
FokI GGATG 5 cut(s) 243, 1108, 1227, 1503, 1565
FriOI GRGCYC 1 cut(s) 1075
Fsp4HI GCNGC 9 cut(s) 142, 194, 278, 424, 738, 1163, 1445, 1448, 1712
FspBI CTAG 7 cut(s) 410, 1178, 1265, 1541, 1746, 1763, 1769
GlaI GCGC 1 cut(s) 757
GluI GCNGC 9 cut(s) 142, 194, 278, 424, 738, 1163, 1445, 1448, 1712
GsuI CTGGAG 1 cut(s) 1375
HaeII RGCGCY 1 cut(s) 759
HaeIII GGCC 3 cut(s) 111, 423, 1307
HapII CCGG 2 cut(s) 83, 113
HgaI GACGC 2 cut(s) 227, 1767
HhaI GCGC 1 cut(s) 758
Hin1I GRCGYC 1 cut(s) 1759
Hin1II CATG 4 cut(s) 678, 1345, 1663, 1729
Hin6I GCGC 1 cut(s) 756
HinP1I GCGC 1 cut(s) 756
HincII GTYRAC 2 cut(s) 650, 1027
HindII GTYRAC 2 cut(s) 650, 1027
HindIII AAGCTT 2 cut(s) 1330, 1699
HinfI GANTC 8 cut(s) 86, 443, 475, 699, 778, 798, 1227, 1563
HpaII CCGG 2 cut(s) 83, 113
HphI GGTGA 3 cut(s) 110, 425, 1199
Hpy166II GTNNAC 4 cut(s) 650, 751, 1027, 1081
Hpy188I TCNGA 5 cut(s) 91, 931, 1294, 1403, 1648
Hpy188III TCNNGA 4 cut(s) 242, 398, 472, 1541
Hpy8I GTNNAC 4 cut(s) 650, 751, 1027, 1081
Hpy99I CGWCG 2 cut(s) 293, 1648
HpyCH4III ACNGT 7 cut(s) 373, 635, 907, 962, 1100, 1524, 1708
HpyCH4IV ACGT 7 cut(s) 303, 348, 386, 654, 1023, 1029, 1257
HpyF10VI GCNNNNNNNGC 2 cut(s) 141, 283
HpyF3I CTNAG 1 cut(s) 966
HpySE526I ACGT 7 cut(s) 303, 348, 386, 654, 1023, 1029, 1257
Hsp92I GRCGYC 1 cut(s) 1759
Hsp92II CATG 4 cut(s) 678, 1345, 1663, 1729
HspAI GCGC 1 cut(s) 756
Ksp22I TGATCA 1 cut(s) 103
Kzo9I GATC 4 cut(s) 103, 1219, 1324, 1648
LmnI GCTCC 2 cut(s) 62, 893
Lsp1109I GCAGC 6 cut(s) 205, 264, 749, 1149, 1431, 1434
LweI GCATC 3 cut(s) 144, 265, 348
MaeI CTAG 7 cut(s) 410, 1178, 1265, 1541, 1746, 1763, 1769
MaeII ACGT 7 cut(s) 303, 348, 386, 654, 1023, 1029, 1257
MaeIII GTNAC 6 cut(s) 344, 349, 382, 413, 688, 1483
MalI GATC 4 cut(s) 105, 1221, 1326, 1650
MboI GATC 4 cut(s) 103, 1219, 1324, 1648
MfeI CAATTG 1 cut(s) 1776
MhlI GDGCHC 2 cut(s) 83, 1075
MlsI TGGCCA 1 cut(s) 1307
MluNI TGGCCA 1 cut(s) 1307
MlyI GAGTC 1 cut(s) 787
MmeI TCCRAC 3 cut(s) 40, 1024, 1626
Mox20I TGGCCA 1 cut(s) 1307
MroXI GAANNNNTTC 2 cut(s) 11, 1203
MscI TGGCCA 1 cut(s) 1307
MseI TTAA 2 cut(s) 785, 852
MslI CAYNNNNRTG 2 cut(s) 153, 302
Msp20I TGGCCA 1 cut(s) 1307
MspA1I CMGCKG 1 cut(s) 1670
MspI CCGG 2 cut(s) 83, 113
MspR9I CCNGG 6 cut(s) 83, 113, 165, 420, 1211, 1393
MunI CAATTG 1 cut(s) 1776
Mva1269I GAATGC 3 cut(s) 179, 924, 1446
MvaI CCWGG 4 cut(s) 165, 420, 1211, 1393
MwoI GCNNNNNNNGC 2 cut(s) 141, 283
NciI CCSGG 2 cut(s) 83, 113
NdeII GATC 4 cut(s) 103, 1219, 1324, 1648
NlaIII CATG 4 cut(s) 678, 1345, 1663, 1729
NlaIV GGNNCC 5 cut(s) 628, 895, 1102, 1360, 1640
NmuCI GTSAC 1 cut(s) 413
OliI CACNNNNGTG 1 cut(s) 302
PctI GAATGC 3 cut(s) 179, 924, 1446
PdmI GAANNNNTTC 2 cut(s) 11, 1203
PfeI GAWTC 7 cut(s) 86, 443, 475, 699, 798, 1227, 1563
PfoI TCCNGGA 1 cut(s) 1391
PkrI GCNGC 9 cut(s) 143, 195, 279, 425, 739, 1164, 1446, 1449, 1713
PleI GAGTC 1 cut(s) 786
PmaCI CACGTG 1 cut(s) 655
PmlI CACGTG 1 cut(s) 655
PpsI GAGTC 1 cut(s) 786
Ppu21I YACGTR 2 cut(s) 387, 655
PpuMI RGGWCCY 1 cut(s) 1736
PsiI TTATAA 1 cut(s) 1533
Psp124BI GAGCTC 1 cut(s) 1075
Psp1406I AACGTT 1 cut(s) 348
Psp5II RGGWCCY 1 cut(s) 1736
Psp6I CCWGG 4 cut(s) 163, 418, 1209, 1391
PspCI CACGTG 1 cut(s) 655
PspEI GGTNACC 1 cut(s) 413
PspGI CCWGG 4 cut(s) 163, 418, 1209, 1391
PspN4I GGNNCC 5 cut(s) 628, 895, 1102, 1360, 1640
PspPI GGNCC 3 cut(s) 110, 1359, 1736
PspPPI RGGWCCY 1 cut(s) 1736
PstI CTGCAG 1 cut(s) 1110
RsaI GTAC 1 cut(s) 580
RsaNI GTAC 1 cut(s) 579
RseI CAYNNNNRTG 2 cut(s) 153, 302
SacI GAGCTC 1 cut(s) 1075
SaqAI TTAA 2 cut(s) 785, 852
SatI GCNGC 9 cut(s) 142, 194, 278, 424, 738, 1163, 1445, 1448, 1712
Sau3AI GATC 4 cut(s) 103, 1219, 1324, 1648
Sau96I GGNCC 3 cut(s) 110, 1359, 1736
SbfI CCTGCAGG 1 cut(s) 1110
SchI GAGTC 1 cut(s) 787
ScrFI CCNGG 6 cut(s) 83, 113, 165, 420, 1211, 1393
SdaI CCTGCAGG 1 cut(s) 1110
SduI GDGCHC 2 cut(s) 83, 1075
SfaNI GCATC 3 cut(s) 144, 265, 348
SfcI CTRYAG 3 cut(s) 1106, 1347, 1731
SinI GGWCC 2 cut(s) 1359, 1736
SmiMI CAYNNNNRTG 2 cut(s) 153, 302
SmlI CTYRAG 1 cut(s) 1451
SmoI CTYRAG 1 cut(s) 1451
SnaBI TACGTA 1 cut(s) 387
Sse8387I CCTGCAGG 1 cut(s) 1110
SsiI CCGC 5 cut(s) 142, 424, 1125, 1670, 1712
SspI AATATT 2 cut(s) 201, 1477
SspMI CTAG 7 cut(s) 410, 1178, 1265, 1541, 1746, 1763, 1769
SstI GAGCTC 1 cut(s) 1075
StyD4I CCNGG 6 cut(s) 81, 111, 163, 418, 1209, 1391
StyI CCWWGG 3 cut(s) 409, 1177, 1320
TaaI ACNGT 7 cut(s) 373, 635, 907, 962, 1100, 1524, 1708
TaiI ACGT 7 cut(s) 306, 351, 389, 657, 1026, 1032, 1260
TaqI TCGA 3 cut(s) 291, 566, 1239
TatI WGTACW 1 cut(s) 578
TauI GCSGC 3 cut(s) 144, 426, 1714
TfiI GAWTC 7 cut(s) 86, 443, 475, 699, 798, 1227, 1563
Tru1I TTAA 2 cut(s) 785, 852
Tru9I TTAA 2 cut(s) 785, 852
TscAI CASTG 2 cut(s) 640, 1529
TseFI GTSAC 1 cut(s) 413
TseI GCWGC 6 cut(s) 193, 277, 737, 1162, 1444, 1447
Tsp45I GTSAC 1 cut(s) 413
TspDTI ATGAA 7 cut(s) 4, 976, 1105, 1110, 1521, 1676, 1714
TspRI CASTG 2 cut(s) 640, 1529
VpaK11BI GGWCC 2 cut(s) 1359, 1736
XagI CCTNNNNNAGG 1 cut(s) 1208
XapI RAATTY 8 cut(s) 331, 429, 932, 1138, 1287, 1396, 1509, 1593
XbaI TCTAGA 1 cut(s) 1540
XcmI CCANNNNNNNNNTGG 2 cut(s) 525, 672
XmaJI CCTAGG 2 cut(s) 409, 1177
XmiI GTMKAC 1 cut(s) 750
XmnI GAANNNNTTC 2 cut(s) 11, 1203
XspI CTAG 7 cut(s) 410, 1178, 1265, 1541, 1746, 1763, 1769
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.