RchiOBHm_Chr1g0334291

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000107
Physical Location & Seq
Forward (+)
26447867 .. 26449764
1898 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ56303

Sequence Viewer

Length: 1662 bp
ATGCTTCTAACTATGAGTTTCTTGTTCTGGTTGCTCCTGATATTTGTAGATGCAGATGTTGTGCATGGTGGAGTAGGTCTTGAAGATTGCACAGAAGCAAGATGTAGCAGCTATGGCCCAGCTATCCGGTTCCCATTTCGACTTAAAGGTAGGCAACCGGTCCATTGTGGTTACCAGGGCTTTGATCTTTCATGCACCAATGGCAATCAGACACTGCTTGAGATGCCATCATCATCTAAGCTCTTTGTTACAGAGATTGATTACACATCACAGACAATTGACGAAGAACCTGCACTTGATTGCTTGGATAGAGACATTTTCAACCACAGTTCTTCTTCTGCCTTCAAATATGTAGGCAACATAAGCCTTTTCAGTTGCCCACCATCAACTGTGAGAGATCAATATATTAAAGACAATTTTCGTTGTCTGGCAAGATTGAGCCCTTGCCATGGTAATCCAGGCAACCATATTTATGCTTTTTGGCCAAGTCATTGTTCTATTGATAGCATACTCCTAGTGTCTTGTACCAAGGTGCATGACTACAAAGATGCTCTTGCATACGCAGAAGGTTTCTCATACATGATTCTCCACTGGTCCATGCCATCTTGTCAACATTGTGAAGAGAAGGGCAAGCTATGTCTGCTGAAGAATGAATTCACAAATCCGACAGATCCTCAAACTCAATGCTTGGATGTACCCAAAGCCAAAGGTTATTGCACAGTTTCTATTATTCTTATAATGACGGGAACAATAATCTGCTATGTCTATAGCTCTGTCAAAAGAGAAGAAGAAAATCAGCTGAGAATTAAAAGATTTTTGGATGACTACAAAGCTCTTAAGCCAAGCAGATATTCTTATGCAGATATTAAGAGGATAACAAAGCAGTTCAAGGAAAAGCGAGGTCAAGGGGCCTATGGAACTGTGTTTAAAGGTAGAGTTTCCTCTGAATTACTTGTTACTGTGAAAATCCTCAACAATTCAAATGAGAATGGGGAAGATTTTATTAATGAAATGGGCACAATGGGTCAAATCCACCATGTCAATGTGGTACGCTTGGTTGGTTACTGTGCTGATGGCTTTATACGAGCTCTTGTTTACGAATTCTTACCAAATGGTCCACTCCATAATTTCTTATCATCAGCAGATAATGAGAATTCGTTCCTTGGCTGGGATAAGTTGCAAGATATTGCTTTAGGTATAGCCAAAGGAATTGAATATCTTCACCAAGCTGGTTGTGAACAACAAATCCTCCACTTTGACATCAAACCCCATAATGTGTTGCTAGACTATGATTTCACTCCAAAAGTTTCCGATTTTGGTTTAGCCAAGTTGTGCTCCAAGGATCAAAGCGCCGTATCCATGACTGCAGCGAGGGGAACCATGGGCTATATTGCACTAGAATTCTTCTCAAGGAACTTTGGTAACGTGTCATATAAGGCAGATGTTTATAGTTTTGGAACATTGCTTCTTGAAATGGTTGGAGGCAGAAAGAATTTTAAAGTCATGGAAGACTCAACCAGCCAAGTCTACTTCCTAGAATGGATCTATAATCTCTTAGAACAAGGGAACGACCTGCGCATCCATATTGGGGACCAAGGAAATGTTGAAATTGCTAGGAAACTTGCAATTGTGGGTCTATGGTGCATCCAATGCACCCAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase Pkinase_Tyr

Protein Analysis

553

Amino Acids

62.39

Weight (kDa)

6.07

Isoelectric Point (pI)

36.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 30 - 93 1.2e-17 Wall-associated receptor kinase galacturonan-binding
PK_Tyr_Ser-Thr PF07714 296 - 505 6.1e-40 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 297 - 507 1.3e-38 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 737
Acc16I TGCGCA 1 cut(s) 1577
Acc36I ACCTGC 2 cut(s) 298, 1581
AccI GTMKAC 1 cut(s) 1527
AclWI GGATC 3 cut(s) 665, 1350, 1550
AcoI YGGCCR 1 cut(s) 482
AcsI RAATTY 5 cut(s) 653, 1100, 1153, 1400, 1492
AcuI CTGAAG 1 cut(s) 665
AfaI GTAC 3 cut(s) 526, 696, 1050
AfiI CCNNNNNNNGG 3 cut(s) 449, 1168, 1588
AflII CTTAAG 1 cut(s) 836
AflIII ACRYGT 1 cut(s) 1425
AgeI ACCGGT 1 cut(s) 157
AgsI TTSAA 8 cut(s) 83, 322, 346, 889, 981, 1214, 1472, 1607
AjnI CCWGG 2 cut(s) 174, 457
AjuI GAANNNNNNNTTGG 4 cut(s) 478, 510, 835, 867
AloI GAACNNNNNNTCC 2 cut(s) 1230, 1262
AluBI AGCT 9 cut(s) 111, 122, 241, 634, 771, 799, 833, 1088, 1229
AluI AGCT 9 cut(s) 111, 122, 241, 634, 771, 799, 833, 1088, 1229
Alw21I GWGCWC 2 cut(s) 1090, 1337
Alw26I GTCTC 1 cut(s) 306
AlwI GGATC 3 cut(s) 665, 1350, 1550
AlwNI CAGNNNCTG 1 cut(s) 214
AoxI GGCC 3 cut(s) 115, 482, 909
ApeKI GCWGC 2 cut(s) 108, 1367
ApoI RAATTY 5 cut(s) 653, 1100, 1153, 1400, 1492
AseI ATTAAT 1 cut(s) 1005
AsiGI ACCGGT 1 cut(s) 157
Asp700I GAANNNNTTC 3 cut(s) 653, 1157, 1218
AspLEI GCGC 2 cut(s) 1352, 1578
AspS9I GGNCC 6 cut(s) 116, 160, 594, 909, 1115, 1591
AsuHPI GGTGA 1 cut(s) 1214
AvaII GGWCC 4 cut(s) 160, 594, 1115, 1591
BaeGI GKGCMC 1 cut(s) 1019
BalI TGGCCA 1 cut(s) 484
BanII GRGCYC 2 cut(s) 443, 1090
BbsI GAAGAC 1 cut(s) 1515
Bbv12I GWGCWC 2 cut(s) 1090, 1337
BbvI GCAGC 2 cut(s) 120, 1379
BccI CCATC 4 cut(s) 235, 391, 610, 1067
BceAI ACGGC 1 cut(s) 1337
BcgI CGANNNNNNTGC 2 cut(s) 272, 306
BciT130I CCWGG 2 cut(s) 176, 459
BciVI GTATCC 1 cut(s) 1366
BcoDI GTCTC 1 cut(s) 306
BfaI CTAG 5 cut(s) 515, 1283, 1397, 1535, 1614
BfmI CTRYAG 2 cut(s) 766, 1365
BfoI RGCGCY 1 cut(s) 1353
BfrI CTTAAG 1 cut(s) 836
BfuAI ACCTGC 2 cut(s) 298, 1581
BfuI GTATCC 1 cut(s) 1366
BisI GCNGC 2 cut(s) 109, 1368
BlsI GCNGC 2 cut(s) 110, 1369
Bme1390I CCNGG 2 cut(s) 176, 459
Bme18I GGWCC 4 cut(s) 160, 594, 1115, 1591
BmgT120I GGNCC 6 cut(s) 116, 160, 594, 909, 1115, 1591
BmiI GGNNCC 4 cut(s) 131, 910, 1378, 1592
BmrFI CCNGG 2 cut(s) 176, 459
BmsI GCATC 5 cut(s) 40, 213, 538, 1587, 1653
BpiI GAAGAC 1 cut(s) 1515
BpuEI CTTGAG 2 cut(s) 239, 1393
BsaJI CCNNGG 7 cut(s) 175, 448, 528, 1162, 1338, 1380, 1594
BsaWI WCCGGW 2 cut(s) 126, 157
BsaXI ACNNNNNCTCC 2 cut(s) 1233, 1263
Bsc4I CCNNNNNNNGG 3 cut(s) 449, 1168, 1588
Bse118I RCCGGY 1 cut(s) 157
Bse1I ACTGG 1 cut(s) 596
Bse3DI GCAATG 1 cut(s) 1460
BseBI CCWGG 2 cut(s) 176, 459
BseDI CCNNGG 7 cut(s) 175, 448, 528, 1162, 1338, 1380, 1594
BseGI GGATG 4 cut(s) 697, 826, 1578, 1644
BseLI CCNNNNNNNGG 3 cut(s) 449, 1168, 1588
BseMI GCAATG 1 cut(s) 1460
BseMII CTCAG 1 cut(s) 791
BseNI ACTGG 1 cut(s) 596
BseSI GKGCMC 1 cut(s) 1019
BseXI GCAGC 2 cut(s) 120, 1379
BseYI CCCAGC 2 cut(s) 118, 1167
BsgI GTGCAG 1 cut(s) 276
BshFI GGCC 3 cut(s) 117, 484, 911
BshTI ACCGGT 1 cut(s) 157
BsiHKAI GWGCWC 2 cut(s) 1090, 1337
BsiSI CCGG 2 cut(s) 127, 158
BslFI GGGAC 1 cut(s) 1604
BslI CCNNNNNNNGG 3 cut(s) 449, 1168, 1588
BsmAI GTCTC 1 cut(s) 306
BsmFI GGGAC 1 cut(s) 1604
BsnI GGCC 3 cut(s) 117, 484, 911
Bsp1286I GDGCHC 4 cut(s) 443, 1019, 1090, 1337
Bsp143I GATC 5 cut(s) 184, 397, 670, 1342, 1542
Bsp19I CCATGG 2 cut(s) 448, 1380
BspANI GGCC 3 cut(s) 117, 484, 911
BspCNI CTCAG 1 cut(s) 792
BspLI GGNNCC 4 cut(s) 131, 910, 1378, 1592
BspMAI CTGCAG 1 cut(s) 1369
BspMI ACCTGC 2 cut(s) 298, 1581
BspPI GGATC 3 cut(s) 665, 1350, 1550
BspTI CTTAAG 1 cut(s) 836
BsrDI GCAATG 1 cut(s) 1460
BsrFI RCCGGY 1 cut(s) 157
BsrI ACTGG 1 cut(s) 596
BssAI RCCGGY 1 cut(s) 157
BssECI CCNNGG 7 cut(s) 175, 448, 528, 1162, 1338, 1380, 1594
BssMI GATC 5 cut(s) 184, 397, 670, 1342, 1542
BssT1I CCWWGG 6 cut(s) 448, 528, 1162, 1338, 1380, 1594
Bst2UI CCWGG 2 cut(s) 176, 459
Bst4CI ACNGT 6 cut(s) 329, 391, 721, 922, 961, 1067
Bst6I CTCTTC 1 cut(s) 615
BstAFI CTTAAG 1 cut(s) 836
BstAPI GCANNNNNTGC 1 cut(s) 1650
BstC8I GCNNGC 1 cut(s) 632
BstDEI CTNAG 3 cut(s) 237, 800, 1555
BstDSI CCRYGG 2 cut(s) 448, 1380
BstEII GGTNACC 1 cut(s) 170
BstF5I GGATG 4 cut(s) 697, 826, 1578, 1644
BstH2I RGCGCY 1 cut(s) 1353
BstHHI GCGC 2 cut(s) 1352, 1578
BstKTI GATC 5 cut(s) 187, 400, 673, 1345, 1545
BstMAI GTCTC 1 cut(s) 306
BstMBI GATC 5 cut(s) 184, 397, 670, 1342, 1542
BstMWI GCNNNNNNNGC 6 cut(s) 114, 201, 223, 363, 640, 1650
BstNI CCWGG 2 cut(s) 176, 459
BstPI GGTNACC 1 cut(s) 170
BstSCI CCNGG 2 cut(s) 174, 457
BstSFI CTRYAG 2 cut(s) 766, 1365
BstSLI GKGCMC 1 cut(s) 1019
BstV1I GCAGC 2 cut(s) 120, 1379
BstV2I GAAGAC 1 cut(s) 1515
BstX2I RGATCY 2 cut(s) 670, 1542
BstYI RGATCY 2 cut(s) 670, 1542
BsuI GTATCC 1 cut(s) 1366
BsuRI GGCC 3 cut(s) 117, 484, 911
BtgI CCRYGG 2 cut(s) 448, 1380
BtsCI GGATG 4 cut(s) 697, 826, 1578, 1644
BtsI GCAGTG 1 cut(s) 212
BtsIMutI CAGTG 2 cut(s) 212, 589
BveI ACCTGC 2 cut(s) 298, 1581
Cac8I GCNNGC 1 cut(s) 632
CaiI CAGNNNCTG 1 cut(s) 214
CfoI GCGC 2 cut(s) 1352, 1578
Cfr10I RCCGGY 1 cut(s) 157
Cfr13I GGNCC 6 cut(s) 116, 160, 594, 909, 1115, 1591
Csp6I GTAC 3 cut(s) 525, 695, 1049
CspAI ACCGGT 1 cut(s) 157
CviQI GTAC 3 cut(s) 525, 695, 1049
DdeI CTNAG 3 cut(s) 237, 800, 1555
DpnI GATC 5 cut(s) 186, 399, 672, 1344, 1544
DpnII GATC 5 cut(s) 184, 397, 670, 1342, 1542
DraI TTTAAA 2 cut(s) 928, 1498
EaeI YGGCCR 1 cut(s) 482
Eam1104I CTCTTC 1 cut(s) 615
EarI CTCTTC 1 cut(s) 615
Ecl136II GAGCTC 1 cut(s) 1088
Eco130I CCWWGG 6 cut(s) 448, 528, 1162, 1338, 1380, 1594
Eco24I GRGCYC 2 cut(s) 443, 1090
Eco47I GGWCC 4 cut(s) 160, 594, 1115, 1591
Eco53kI GAGCTC 1 cut(s) 1088
Eco57I CTGAAG 1 cut(s) 665
Eco91I GGTNACC 1 cut(s) 170
EcoICRI GAGCTC 1 cut(s) 1088
EcoO109I RGGNCCY 1 cut(s) 909
EcoO65I GGTNACC 1 cut(s) 170
EcoRI GAATTC 4 cut(s) 653, 1100, 1153, 1400
EcoRII CCWGG 2 cut(s) 174, 457
EcoT14I CCWWGG 6 cut(s) 448, 528, 1162, 1338, 1380, 1594
EcoT38I GRGCYC 2 cut(s) 443, 1090
ErhI CCWWGG 6 cut(s) 448, 528, 1162, 1338, 1380, 1594
FalI AAGNNNNNCTT 2 cut(s) 537, 569
FaqI GGGAC 1 cut(s) 1604
FblI GTMKAC 1 cut(s) 1527
Fnu4HI GCNGC 2 cut(s) 109, 1368
FokI GGATG 4 cut(s) 704, 833, 1565, 1631
FriOI GRGCYC 2 cut(s) 443, 1090
Fsp4HI GCNGC 2 cut(s) 109, 1368
FspBI CTAG 5 cut(s) 515, 1283, 1397, 1535, 1614
FspI TGCGCA 1 cut(s) 1577
GlaI GCGC 2 cut(s) 1351, 1577
GluI GCNGC 2 cut(s) 109, 1368
GsaI CCCAGC 2 cut(s) 122, 1171
HaeII RGCGCY 1 cut(s) 1353
HaeIII GGCC 3 cut(s) 117, 484, 911
HapII CCGG 2 cut(s) 127, 158
HhaI GCGC 2 cut(s) 1352, 1578
Hin6I GCGC 2 cut(s) 1350, 1576
HinP1I GCGC 2 cut(s) 1350, 1576
HincII GTYRAC 1 cut(s) 611
HindII GTYRAC 1 cut(s) 611
HinfI GANTC 2 cut(s) 583, 1511
HpaII CCGG 2 cut(s) 127, 158
HphI GGTGA 1 cut(s) 1214
Hpy166II GTNNAC 5 cut(s) 611, 1096, 1118, 1238, 1528
Hpy188I TCNGA 4 cut(s) 210, 666, 946, 1312
Hpy188III TCNNGA 3 cut(s) 37, 80, 1469
Hpy8I GTNNAC 5 cut(s) 611, 1096, 1118, 1238, 1528
HpyAV CCTTC 3 cut(s) 352, 560, 619
HpyCH4III ACNGT 6 cut(s) 329, 391, 721, 922, 961, 1067
HpyCH4IV ACGT 1 cut(s) 1425
HpyF10VI GCNNNNNNNGC 6 cut(s) 114, 201, 223, 363, 640, 1650
HpyF3I CTNAG 3 cut(s) 237, 800, 1555
HpySE526I ACGT 1 cut(s) 1425
HspAI GCGC 2 cut(s) 1350, 1576
Kzo9I GATC 5 cut(s) 184, 397, 670, 1342, 1542
LmnI GCTCC 2 cut(s) 39, 1340
Lsp1109I GCAGC 2 cut(s) 120, 1379
LweI GCATC 5 cut(s) 40, 213, 538, 1587, 1653
MaeI CTAG 5 cut(s) 515, 1283, 1397, 1535, 1614
MaeII ACGT 1 cut(s) 1425
MaeIII GTNAC 5 cut(s) 170, 247, 955, 1061, 1421
MalI GATC 5 cut(s) 186, 399, 672, 1344, 1544
MboI GATC 5 cut(s) 184, 397, 670, 1342, 1542
MfeI CAATTG 2 cut(s) 276, 1626
MflI RGATCY 2 cut(s) 670, 1542
MhlI GDGCHC 4 cut(s) 443, 1019, 1090, 1337
MlsI TGGCCA 1 cut(s) 484
MluNI TGGCCA 1 cut(s) 484
MlyI GAGTC 1 cut(s) 1505
MmeI TCCRAC 2 cut(s) 689, 1459
MnlI CCTC 8 cut(s) 684, 864, 893, 952, 980, 1259, 1365, 1475
Mox20I TGGCCA 1 cut(s) 484
MroXI GAANNNNTTC 3 cut(s) 653, 1157, 1218
MscI TGGCCA 1 cut(s) 484
MseI TTAA 8 cut(s) 144, 408, 807, 837, 867, 927, 1005, 1497
MslI CAYNNNNRTG 2 cut(s) 471, 1041
Msp20I TGGCCA 1 cut(s) 484
MspA1I CMGCKG 1 cut(s) 799
MspCI CTTAAG 1 cut(s) 836
MspI CCGG 2 cut(s) 127, 158
MspR9I CCNGG 2 cut(s) 176, 459
MunI CAATTG 2 cut(s) 276, 1626
MvaI CCWGG 2 cut(s) 176, 459
MwoI GCNNNNNNNGC 6 cut(s) 114, 201, 223, 363, 640, 1650
NcoI CCATGG 2 cut(s) 448, 1380
NdeII GATC 5 cut(s) 184, 397, 670, 1342, 1542
NlaIV GGNNCC 4 cut(s) 131, 910, 1378, 1592
NsbI TGCGCA 1 cut(s) 1577
PdmI GAANNNNTTC 3 cut(s) 653, 1157, 1218
PfeI GAWTC 1 cut(s) 583
PinAI ACCGGT 1 cut(s) 157
PkrI GCNGC 2 cut(s) 110, 1369
PleI GAGTC 1 cut(s) 1505
PpsI GAGTC 1 cut(s) 1505
PshBI ATTAAT 1 cut(s) 1005
PsiI TTATAA 1 cut(s) 737
Psp124BI GAGCTC 1 cut(s) 1090
Psp6I CCWGG 2 cut(s) 174, 457
PspEI GGTNACC 1 cut(s) 170
PspFI CCCAGC 2 cut(s) 118, 1167
PspGI CCWGG 2 cut(s) 174, 457
PspN4I GGNNCC 4 cut(s) 131, 910, 1378, 1592
PspPI GGNCC 6 cut(s) 116, 160, 594, 909, 1115, 1591
PstI CTGCAG 1 cut(s) 1369
PstNI CAGNNNCTG 1 cut(s) 214
PsuI RGATCY 2 cut(s) 670, 1542
PvuII CAGCTG 1 cut(s) 799
RsaI GTAC 3 cut(s) 526, 696, 1050
RsaNI GTAC 3 cut(s) 525, 695, 1049
RseI CAYNNNNRTG 2 cut(s) 471, 1041
SacI GAGCTC 1 cut(s) 1090
SaqAI TTAA 8 cut(s) 144, 408, 807, 837, 867, 927, 1005, 1497
SatI GCNGC 2 cut(s) 109, 1368
Sau3AI GATC 5 cut(s) 184, 397, 670, 1342, 1542
Sau96I GGNCC 6 cut(s) 116, 160, 594, 909, 1115, 1591
SchI GAGTC 1 cut(s) 1505
ScrFI CCNGG 2 cut(s) 176, 459
SduI GDGCHC 4 cut(s) 443, 1019, 1090, 1337
SfaNI GCATC 5 cut(s) 40, 213, 538, 1587, 1653
SfcI CTRYAG 2 cut(s) 766, 1365
SinI GGWCC 4 cut(s) 160, 594, 1115, 1591
SmiMI CAYNNNNRTG 2 cut(s) 471, 1041
SmlI CTYRAG 3 cut(s) 218, 836, 1408
SmoI CTYRAG 3 cut(s) 218, 836, 1408
SspMI CTAG 5 cut(s) 515, 1283, 1397, 1535, 1614
SstI GAGCTC 1 cut(s) 1090
StyD4I CCNGG 2 cut(s) 174, 457
StyI CCWWGG 6 cut(s) 448, 528, 1162, 1338, 1380, 1594
TaaI ACNGT 6 cut(s) 329, 391, 721, 922, 961, 1067
TaiI ACGT 1 cut(s) 1428
TaqI TCGA 1 cut(s) 139
TfiI GAWTC 1 cut(s) 583
Tru1I TTAA 8 cut(s) 144, 408, 807, 837, 867, 927, 1005, 1497
Tru9I TTAA 8 cut(s) 144, 408, 807, 837, 867, 927, 1005, 1497
TscAI CASTG 2 cut(s) 219, 596
TseI GCWGC 2 cut(s) 108, 1367
TspDTI ATGAA 3 cut(s) 180, 666, 1023
TspRI CASTG 2 cut(s) 219, 596
Vha464I CTTAAG 1 cut(s) 836
VpaK11BI GGWCC 4 cut(s) 160, 594, 1115, 1591
VspI ATTAAT 1 cut(s) 1005
XapI RAATTY 5 cut(s) 653, 1100, 1153, 1400, 1492
XmiI GTMKAC 1 cut(s) 1527
XmnI GAANNNNTTC 3 cut(s) 653, 1157, 1218
XspI CTAG 5 cut(s) 515, 1283, 1397, 1535, 1614
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.