Rw2G029190

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Reverse (-)
47205386 .. 47206120
735 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G029190.1

Sequence Viewer

Length: 735 bp
ATGGGTCTCATCCACCATGTCAATGTGGTTCGCTTGGTTGGCTTTTGTGCTGATGGATTCATACGAGCTCTTATTTATGAGTACTTACCAAATGGTTCATTGCAGAATTTCTTGTCATCCGCAGATGATAGGAACTCATTTCTGGGTTGGGAAAAGTTGCAAAATATTGCTTTGGGTATAGCTAAAGGAATCGAATATCTTCACCAAGGGTGTGACCAGAGAATCCTCCATTTTGATATCAAACCTAATAACATTTTGCTAGACCAGGATTTCACTCCAAAAGTTTCTGATTTTGGTCTAGCCAAGTTGTGCTCTAAGGATCAGAGTGCAATATACATGACTACAGCTAGGGGGACCATGGGCTACATTGCACCAGAAGTTTTCTCTAGGAACTTCGGGAATGTGTCCTATAAGTCAGATGTATATAGTTTTGGAGTCTTGCTGCTTGAAATGGTTGGGGGAAAGAAAAATTTTAAAGTTATGGAGGACTCCACCAGCCATATCTATTTCCCAGAATGGATTTATAACCTTTTAGAACAAGGGAGCGATCTACGAATCCATATTGAGGACGAAGGAGATGTTAAAGTTGCTCGAAAACTTGCAATCGTTGGTCTATGGTGCATTCAATGGCATCCGGTAGATCGCCCATCCATGAACATTGTAGTTCAAATGTTGGAGAGAGAAGGTGACAATCTAACCATGCCTCCTTATCCCTTTGCCTCTGCTTCAAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

244

Amino Acids

27.59

Weight (kDa)

5.62

Isoelectric Point (pI)

38.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 1 - 224 2.7e-33 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 4 - 223 1.3e-37 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 525
AciI CCGC 1 cut(s) 120
AclWI GGATC 1 cut(s) 327
AcsI RAATTY 2 cut(s) 106, 469
AfaI GTAC 1 cut(s) 83
AfiI CCNNNNNNNGG 1 cut(s) 565
AgsI TTSAA 4 cut(s) 449, 626, 668, 729
AjnI CCWGG 1 cut(s) 264
AluBI AGCT 3 cut(s) 68, 182, 347
AluI AGCT 3 cut(s) 68, 182, 347
Alw21I GWGCWC 2 cut(s) 70, 314
Alw26I GTCTC 1 cut(s) 11
AlwI GGATC 1 cut(s) 327
ApeKI GCWGC 1 cut(s) 442
ApoI RAATTY 2 cut(s) 106, 469
Asp700I GAANNNNTTC 1 cut(s) 198
AspS9I GGNCC 1 cut(s) 354
AsuHPI GGTGA 2 cut(s) 194, 698
AvaII GGWCC 1 cut(s) 354
BanII GRGCYC 1 cut(s) 70
Bbv12I GWGCWC 2 cut(s) 70, 314
BbvI GCAGC 1 cut(s) 429
BccI CCATC 2 cut(s) 47, 655
BciT130I CCWGG 1 cut(s) 266
BcoDI GTCTC 1 cut(s) 11
BfaI CTAG 4 cut(s) 260, 299, 348, 387
BfmI CTRYAG 1 cut(s) 342
BisI GCNGC 1 cut(s) 443
BlsI GCNGC 1 cut(s) 444
BmcAI AGTACT 1 cut(s) 83
Bme1390I CCNGG 1 cut(s) 266
Bme18I GGWCC 1 cut(s) 354
BmgT120I GGNCC 1 cut(s) 354
BmiI GGNNCC 1 cut(s) 355
BmrFI CCNGG 1 cut(s) 266
BmsI GCATC 1 cut(s) 640
BsaI GGTCTC 1 cut(s) 11
BsaJI CCNNGG 2 cut(s) 205, 357
BsaWI WCCGGW 1 cut(s) 634
BsaXI ACNNNNNCTCC 2 cut(s) 688, 718
Bsc4I CCNNNNNNNGG 1 cut(s) 565
Bse3DI GCAATG 2 cut(s) 98, 366
BseBI CCWGG 1 cut(s) 266
BseDI CCNNGG 2 cut(s) 205, 357
BseGI GGATG 4 cut(s) 9, 116, 631, 647
BseLI CCNNNNNNNGG 1 cut(s) 565
BseMI GCAATG 2 cut(s) 98, 366
BseXI GCAGC 1 cut(s) 429
BsiHKAI GWGCWC 2 cut(s) 70, 314
BsiSI CCGG 1 cut(s) 635
BslFI GGGAC 1 cut(s) 367
BslI CCNNNNNNNGG 1 cut(s) 565
BsmAI GTCTC 1 cut(s) 11
BsmFI GGGAC 1 cut(s) 367
BsmI GAATGC 1 cut(s) 621
Bso31I GGTCTC 1 cut(s) 11
Bsp1286I GDGCHC 2 cut(s) 70, 314
Bsp143I GATC 3 cut(s) 319, 547, 640
Bsp19I CCATGG 1 cut(s) 357
BspACI CCGC 1 cut(s) 120
BspLI GGNNCC 1 cut(s) 355
BspPI GGATC 1 cut(s) 327
BspTNI GGTCTC 1 cut(s) 11
BsrDI GCAATG 2 cut(s) 98, 366
BssECI CCNNGG 2 cut(s) 205, 357
BssMI GATC 3 cut(s) 319, 547, 640
BssT1I CCWWGG 2 cut(s) 205, 357
Bst2UI CCWGG 1 cut(s) 266
BstDEI CTNAG 1 cut(s) 315
BstDSI CCRYGG 1 cut(s) 357
BstF5I GGATG 4 cut(s) 9, 116, 631, 647
BstKTI GATC 3 cut(s) 322, 550, 643
BstMAI GTCTC 1 cut(s) 11
BstMBI GATC 3 cut(s) 319, 547, 640
BstMWI GCNNNNNNNGC 1 cut(s) 39
BstNI CCWGG 1 cut(s) 266
BstSCI CCNGG 1 cut(s) 264
BstSFI CTRYAG 1 cut(s) 342
BstV1I GCAGC 1 cut(s) 429
BtgI CCRYGG 1 cut(s) 357
BtsCI GGATG 4 cut(s) 9, 116, 631, 647
Cfr13I GGNCC 1 cut(s) 354
Csp6I GTAC 1 cut(s) 82
CviAII CATG 5 cut(s) 17, 337, 358, 652, 700
CviJI RGCY 7 cut(s) 42, 68, 182, 302, 347, 363, 498
CviKI_1 RGCY 7 cut(s) 42, 68, 182, 302, 347, 363, 498
CviQI GTAC 1 cut(s) 82
DdeI CTNAG 1 cut(s) 315
DpnI GATC 3 cut(s) 321, 549, 642
DpnII GATC 3 cut(s) 319, 547, 640
DraI TTTAAA 1 cut(s) 475
Ecl136II GAGCTC 1 cut(s) 68
Eco130I CCWWGG 2 cut(s) 205, 357
Eco24I GRGCYC 1 cut(s) 70
Eco31I GGTCTC 1 cut(s) 11
Eco32I GATATC 1 cut(s) 238
Eco47I GGWCC 1 cut(s) 354
Eco53kI GAGCTC 1 cut(s) 68
EcoICRI GAGCTC 1 cut(s) 68
EcoRII CCWGG 1 cut(s) 264
EcoRV GATATC 1 cut(s) 238
EcoT14I CCWWGG 2 cut(s) 205, 357
EcoT38I GRGCYC 1 cut(s) 70
ErhI CCWWGG 2 cut(s) 205, 357
FaeI CATG 5 cut(s) 20, 340, 361, 655, 703
FaqI GGGAC 1 cut(s) 367
FatI CATG 5 cut(s) 16, 336, 357, 651, 699
Fnu4HI GCNGC 1 cut(s) 443
FokI GGATG 3 cut(s) 103, 618, 634
FriOI GRGCYC 1 cut(s) 70
Fsp4HI GCNGC 1 cut(s) 443
FspBI CTAG 4 cut(s) 260, 299, 348, 387
GluI GCNGC 1 cut(s) 443
HapII CCGG 1 cut(s) 635
Hin1II CATG 5 cut(s) 20, 340, 361, 655, 703
HinfI GANTC 6 cut(s) 57, 189, 222, 435, 488, 555
HpaII CCGG 1 cut(s) 635
HphI GGTGA 2 cut(s) 194, 698
Hpy188I TCNGA 3 cut(s) 289, 324, 418
Hpy188III TCNNGA 1 cut(s) 397
HpyAV CCTTC 2 cut(s) 566, 677
HpyCH4V TGCA 6 cut(s) 103, 160, 329, 371, 602, 621
HpyF10VI GCNNNNNNNGC 1 cut(s) 39
HpyF3I CTNAG 1 cut(s) 315
Hsp92II CATG 5 cut(s) 20, 340, 361, 655, 703
Kzo9I GATC 3 cut(s) 319, 547, 640
LmnI GCTCC 1 cut(s) 543
LpnPI CCDG 8 cut(s) 128, 230, 251, 278, 387, 508, 525, 648
Lsp1109I GCAGC 1 cut(s) 429
LweI GCATC 1 cut(s) 640
MaeI CTAG 4 cut(s) 260, 299, 348, 387
MaeIII GTNAC 2 cut(s) 212, 686
MalI GATC 3 cut(s) 321, 549, 642
MboI GATC 3 cut(s) 319, 547, 640
MboII GAAGA 1 cut(s) 191
MhlI GDGCHC 2 cut(s) 70, 314
MluCI AATT 3 cut(s) 106, 469, 730
MlyI GAGTC 2 cut(s) 444, 482
MmeI TCCRAC 1 cut(s) 654
MnlI CCTC 5 cut(s) 236, 478, 559, 714, 730
MroXI GAANNNNTTC 1 cut(s) 198
MseI TTAA 2 cut(s) 474, 582
MslI CAYNNNNRTG 1 cut(s) 21
MspI CCGG 1 cut(s) 635
MspR9I CCNGG 1 cut(s) 266
Mva1269I GAATGC 1 cut(s) 621
MvaI CCWGG 1 cut(s) 266
MwoI GCNNNNNNNGC 1 cut(s) 39
NcoI CCATGG 1 cut(s) 357
NdeII GATC 3 cut(s) 319, 547, 640
NlaIII CATG 5 cut(s) 20, 340, 361, 655, 703
NlaIV GGNNCC 1 cut(s) 355
NmuCI GTSAC 2 cut(s) 212, 686
PctI GAATGC 1 cut(s) 621
PdmI GAANNNNTTC 1 cut(s) 198
PfeI GAWTC 4 cut(s) 57, 189, 222, 555
PkrI GCNGC 1 cut(s) 444
PleI GAGTC 2 cut(s) 443, 482
PpsI GAGTC 2 cut(s) 443, 482
PsiI TTATAA 1 cut(s) 525
Psp124BI GAGCTC 1 cut(s) 70
Psp6I CCWGG 1 cut(s) 264
PspGI CCWGG 1 cut(s) 264
PspN4I GGNNCC 1 cut(s) 355
PspPI GGNCC 1 cut(s) 354
RsaI GTAC 1 cut(s) 83
RsaNI GTAC 1 cut(s) 82
RseI CAYNNNNRTG 1 cut(s) 21
SacI GAGCTC 1 cut(s) 70
SaqAI TTAA 2 cut(s) 474, 582
SatI GCNGC 1 cut(s) 443
Sau3AI GATC 3 cut(s) 319, 547, 640
Sau96I GGNCC 1 cut(s) 354
ScaI AGTACT 1 cut(s) 83
SchI GAGTC 2 cut(s) 444, 482
ScrFI CCNGG 1 cut(s) 266
SduI GDGCHC 2 cut(s) 70, 314
SetI ASST 6 cut(s) 70, 184, 247, 349, 531, 688
SfaNI GCATC 1 cut(s) 640
SfcI CTRYAG 1 cut(s) 342
SinI GGWCC 1 cut(s) 354
SmiMI CAYNNNNRTG 1 cut(s) 21
Sse9I AATT 3 cut(s) 106, 469, 730
SsiI CCGC 1 cut(s) 120
SspI AATATT 1 cut(s) 166
SspMI CTAG 4 cut(s) 260, 299, 348, 387
SstI GAGCTC 1 cut(s) 70
StyD4I CCNGG 1 cut(s) 264
StyI CCWWGG 2 cut(s) 205, 357
TaqI TCGA 2 cut(s) 192, 592
TasI AATT 3 cut(s) 106, 469, 730
TatI WGTACW 1 cut(s) 81
TfiI GAWTC 4 cut(s) 57, 189, 222, 555
Tru1I TTAA 2 cut(s) 474, 582
Tru9I TTAA 2 cut(s) 474, 582
TseFI GTSAC 2 cut(s) 212, 686
TseI GCWGC 1 cut(s) 442
Tsp45I GTSAC 2 cut(s) 212, 686
TspDTI ATGAA 3 cut(s) 49, 87, 668
VpaK11BI GGWCC 1 cut(s) 354
XapI RAATTY 2 cut(s) 106, 469
XmnI GAANNNNTTC 1 cut(s) 198
XspI CTAG 4 cut(s) 260, 299, 348, 387
ZrmI AGTACT 1 cut(s) 83
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.