RchiOBHm_Chr5g0047611

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000107
Physical Location & Seq
Reverse (-)
44137166 .. 44139163
1998 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ32549

Sequence Viewer

Length: 1761 bp
ATGCTTCTAACTATGAGTTTCTTGTTCTGGTTGCTCCTGATATTTGTAGATGCAGATGTTGTGCATGGTGGAGTAGGTCCTGAAGATTGCAAAGAAGCAAGATGTAGCAGTGATGGCCCAGTTATCCAGTTCCCATTTCGACTTAAAGGTAGGCAACCGGTCCATTGTGGTTACCCGGGTTTTGATCTTTCATGCACCAAAGACAAAGAGACATTGCTTGAGATGCCATCATCATCCAAGCTCTTTGTTAGAGAGATTAACTACACATCACAGAAAATTCAAGCTTATCCTCAACTTGGTTGCTTGGACAAAGACATTTTCTACCAGGGTTCTTCTGCCTTCAAATATGTAGGCAACACAATCTTGTTCAGTTGCCCACCATCGACTTTGAGAGATCAATATATTACAGACAATTTTCATTGTCTGGCAAGATTGAGCCCTTGCCATGGTAATCCAGGCAACCATAGTTATGCTTTTGGGCTAGGTTGTTCTATTGATGAAATACCCCTAGTGTCTTGTACCAAGGTGCATGACTACAAAGATGCTCTTGTATACCCATATGGTTTCTCACGCATGTATCTCTCACGCATATATCTCCACTGGTCCATACCATCTTGTCAACATTGTGAAGAGATGGGCAAGTTATGTATGCTGAAGAATGAATTCACAAATCATACGGATCCTCAAACTAAATGCTTTCCCAAAGACAAAGGTTCTTGCACACTTTCTGTTATTCTTATAGTGACGGGAATGACAATCTACTATGTCTACAGCTCTCTGAAAAGAGAAGAAGAAAATCAGCTGAGAATTAAAAGATTTTTGGATGAATACAGAGCTCTTAAGCCAAGCAGATATTCTTATGCAGATATTAAGAGGATAACAGAGAAGTTCAAGGAGAAGCTAGGTCAAGGGGCCTATGGAACTGTATTTAAAGGTAGGCTTTCCTCTGAATTACTTGTTGCTGTGAAAATCCTCAACAATTCAAATGAGAAAGGGGAAGATTTTATTAATGAAGTGGGCACAATGGGTCAAATCCACCATGTCAATGTGGTACGCTTGATTGGTTACTGTGCTGATGGATTTATACGAGCTCTTGTTTATGAATTCTTACCAAACGGTCCACTCCAGAATTTCTTATCATCAGCAGATAATGAAAATTCATTCATTGGTTGGGATAAGTTGCAAGATATTGCTTTAGGTATAGCCAAAGGACTTGAATATCTTCACCAAGGTTGCGAACAACAAATCCTCCACTTTGACATCAAACCCCATAATGTGTTGCTAGACCATGATTTCACACCAAAAGTTTCCGATTTTGGTTTAGCCAAGTTGTGCTCTAGGGATCAAAGCGCCGTATCCATGACTGCAAGGGGAACCATGGGCTATATTGCACCAGAAGTCTTCTCTAGGAACTTTGGTAACGTGTCATATAAGGCAGATGTCTATAGTTTTGGAACATTGCTTCTTGAAATGGTTGGGGGCAGAAAGAATTTTAAAGTCATGGAAGACTCCACCAGCCAAGTCTACTTCCCAGAATGGATCTATAACCTCTTAGAACAAGGGAACGACCTTCGCATCCATATTGGGGACGAAGGAAATGTTGAAATTGCTGAGACACTTGCAGTTGTGGGTCTATGGTGCATCCAATGGTATCCAATAGACCGTCCTTCCATGAAAACAGTAGTTCAAATGTTGGAAAGGGAAGGTGACAATCTGACCATGCCTCCTAATCCTTTTGCCTCTAATTCATCTTCGAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase Pkinase_Tyr

Protein Analysis

586

Amino Acids

66.25

Weight (kDa)

6.08

Isoelectric Point (pI)

35.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 30 - 95 1.5e-17 Wall-associated receptor kinase galacturonan-binding
PK_Tyr_Ser-Thr PF07714 296 - 565 1.4e-44 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 297 - 563 1e-45 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 3 cut(s) 552, 768, 1524
AclWI GGATC 4 cut(s) 674, 687, 1350, 1547
AcsI RAATTY 6 cut(s) 276, 662, 1103, 1129, 1156, 1489
AcuI CTGAAG 2 cut(s) 102, 674
AfaI GTAC 2 cut(s) 520, 1053
AfiI CCNNNNNNNGG 3 cut(s) 296, 446, 1585
AflII CTTAAG 1 cut(s) 839
AflIII ACRYGT 1 cut(s) 1422
AgeI ACCGGT 1 cut(s) 157
AgsI TTSAA 8 cut(s) 281, 343, 892, 984, 1217, 1469, 1604, 1688
AjnI CCWGG 2 cut(s) 324, 454
AjuI GAANNNNNNNTTGG 2 cut(s) 838, 870
AloI GAACNNNNNNTCC 2 cut(s) 1230, 1262
AluBI AGCT 7 cut(s) 241, 284, 774, 802, 836, 901, 1091
AluI AGCT 7 cut(s) 241, 284, 774, 802, 836, 901, 1091
Alw21I GWGCWC 3 cut(s) 838, 1093, 1337
Alw26I GTCTC 2 cut(s) 203, 1607
AlwI GGATC 4 cut(s) 674, 687, 1350, 1547
Ama87I CYCGRG 1 cut(s) 175
AoxI GGCC 2 cut(s) 115, 912
ApoI RAATTY 6 cut(s) 276, 662, 1103, 1129, 1156, 1489
AseI ATTAAT 1 cut(s) 1008
AsiGI ACCGGT 1 cut(s) 157
Asp700I GAANNNNTTC 2 cut(s) 662, 1221
AspLEI GCGC 1 cut(s) 1352
AspS9I GGNCC 6 cut(s) 77, 116, 160, 603, 912, 1118
AsuC2I CCSGG 2 cut(s) 176, 177
AsuHPI GGTGA 2 cut(s) 1217, 1718
AvaI CYCGRG 1 cut(s) 175
AvaII GGWCC 4 cut(s) 77, 160, 603, 1118
BaeGI GKGCMC 1 cut(s) 1022
BaeI ACNNNNGTAYC 2 cut(s) 560, 593
BamHI GGATCC 1 cut(s) 679
BanII GRGCYC 3 cut(s) 440, 838, 1093
BbsI GAAGAC 2 cut(s) 1393, 1512
Bbv12I GWGCWC 3 cut(s) 838, 1093, 1337
BccI CCATC 6 cut(s) 107, 235, 388, 619, 628, 1070
BceAI ACGGC 1 cut(s) 1337
BciT130I CCWGG 2 cut(s) 326, 456
BciVI GTATCC 2 cut(s) 1366, 1662
BcnI CCSGG 2 cut(s) 176, 177
BcoDI GTCTC 2 cut(s) 203, 1607
BfaI CTAG 6 cut(s) 482, 509, 902, 1283, 1338, 1407
BfmI CTRYAG 2 cut(s) 769, 1444
BfoI RGCGCY 1 cut(s) 1353
BfrI CTTAAG 1 cut(s) 839
BfuI GTATCC 2 cut(s) 1366, 1662
Bme1390I CCNGG 4 cut(s) 176, 177, 326, 456
Bme18I GGWCC 4 cut(s) 77, 160, 603, 1118
BmeT110I CYCGRG 1 cut(s) 175
BmgT120I GGNCC 6 cut(s) 77, 116, 160, 603, 912, 1118
BmiI GGNNCC 3 cut(s) 681, 913, 1375
BmrFI CCNGG 4 cut(s) 176, 177, 326, 456
BmrI ACTGGG 1 cut(s) 113
BmsI GCATC 5 cut(s) 40, 213, 532, 1584, 1650
BmuI ACTGGG 1 cut(s) 113
BpiI GAAGAC 2 cut(s) 1393, 1512
BpmI CTGGAG 1 cut(s) 1109
BpuEI CTTGAG 1 cut(s) 239
BpuMI CCSGG 2 cut(s) 176, 177
BsaJI CCNNGG 6 cut(s) 175, 325, 445, 522, 1228, 1377
BsaWI WCCGGW 1 cut(s) 157
BsaXI ACNNNNNCTCC 4 cut(s) 1233, 1263, 1708, 1738
Bsc4I CCNNNNNNNGG 3 cut(s) 296, 446, 1585
Bse118I RCCGGY 1 cut(s) 157
Bse1I ACTGG 3 cut(s) 119, 127, 605
Bse3DI GCAATG 2 cut(s) 212, 1457
BseBI CCWGG 2 cut(s) 326, 456
BseDI CCNNGG 6 cut(s) 175, 325, 445, 522, 1228, 1377
BseGI GGATG 4 cut(s) 233, 829, 1575, 1641
BseLI CCNNNNNNNGG 3 cut(s) 296, 446, 1585
BseMI GCAATG 2 cut(s) 212, 1457
BseMII CTCAG 2 cut(s) 794, 1602
BseNI ACTGG 3 cut(s) 119, 127, 605
BseSI GKGCMC 1 cut(s) 1022
BshFI GGCC 2 cut(s) 117, 914
BshTI ACCGGT 1 cut(s) 157
BsiHKAI GWGCWC 3 cut(s) 838, 1093, 1337
BsiHKCI CYCGRG 1 cut(s) 175
BsiSI CCGG 2 cut(s) 158, 176
BslFI GGGAC 1 cut(s) 1601
BslI CCNNNNNNNGG 3 cut(s) 296, 446, 1585
BsmAI GTCTC 2 cut(s) 203, 1607
BsmFI GGGAC 1 cut(s) 1601
BsnI GGCC 2 cut(s) 117, 914
BsoBI CYCGRG 1 cut(s) 175
Bsp1286I GDGCHC 5 cut(s) 440, 838, 1022, 1093, 1337
Bsp143I GATC 5 cut(s) 184, 394, 679, 1342, 1539
Bsp19I CCATGG 2 cut(s) 445, 1377
BspANI GGCC 2 cut(s) 117, 914
BspCNI CTCAG 2 cut(s) 795, 1603
BspLI GGNNCC 3 cut(s) 681, 913, 1375
BspPI GGATC 4 cut(s) 674, 687, 1350, 1547
BspTI CTTAAG 1 cut(s) 839
BsrDI GCAATG 2 cut(s) 212, 1457
BsrFI RCCGGY 1 cut(s) 157
BsrI ACTGG 3 cut(s) 119, 127, 605
BssAI RCCGGY 1 cut(s) 157
BssECI CCNNGG 6 cut(s) 175, 325, 445, 522, 1228, 1377
BssMI GATC 5 cut(s) 184, 394, 679, 1342, 1539
BssNAI GTATAC 1 cut(s) 553
BssT1I CCWWGG 4 cut(s) 445, 522, 1228, 1377
Bst1107I GTATAC 1 cut(s) 553
Bst2UI CCWGG 2 cut(s) 326, 456
Bst4CI ACNGT 5 cut(s) 925, 1070, 1118, 1664, 1681
Bst6I CTCTTC 1 cut(s) 624
BstAFI CTTAAG 1 cut(s) 839
BstDEI CTNAG 3 cut(s) 803, 1552, 1611
BstDSI CCRYGG 2 cut(s) 445, 1377
BstEII GGTNACC 1 cut(s) 170
BstF5I GGATG 4 cut(s) 233, 829, 1575, 1641
BstH2I RGCGCY 1 cut(s) 1353
BstHHI GCGC 1 cut(s) 1352
BstKTI GATC 5 cut(s) 187, 397, 682, 1345, 1542
BstMAI GTCTC 2 cut(s) 203, 1607
BstMBI GATC 5 cut(s) 184, 394, 679, 1342, 1539
BstMWI GCNNNNNNNGC 2 cut(s) 114, 223
BstNI CCWGG 2 cut(s) 326, 456
BstNSI RCATGY 1 cut(s) 577
BstPI GGTNACC 1 cut(s) 170
BstSCI CCNGG 4 cut(s) 174, 175, 324, 454
BstSFI CTRYAG 2 cut(s) 769, 1444
BstSLI GKGCMC 1 cut(s) 1022
BstV2I GAAGAC 2 cut(s) 1393, 1512
BstX2I RGATCY 2 cut(s) 679, 1539
BstYI RGATCY 2 cut(s) 679, 1539
BstZ17I GTATAC 1 cut(s) 553
BsuI GTATCC 2 cut(s) 1366, 1662
BsuRI GGCC 2 cut(s) 117, 914
BtgI CCRYGG 2 cut(s) 445, 1377
BtsCI GGATG 4 cut(s) 233, 829, 1575, 1641
BtsI GCAGTG 1 cut(s) 115
BtsIMutI CAGTG 2 cut(s) 115, 598
CfoI GCGC 1 cut(s) 1352
Cfr10I RCCGGY 1 cut(s) 157
Cfr13I GGNCC 6 cut(s) 77, 116, 160, 603, 912, 1118
Cfr9I CCCGGG 1 cut(s) 175
Csp6I GTAC 2 cut(s) 519, 1052
CspAI ACCGGT 1 cut(s) 157
CviQI GTAC 2 cut(s) 519, 1052
DdeI CTNAG 3 cut(s) 803, 1552, 1611
DpnI GATC 5 cut(s) 186, 396, 681, 1344, 1541
DpnII GATC 5 cut(s) 184, 394, 679, 1342, 1539
DraI TTTAAA 2 cut(s) 931, 1495
Eam1104I CTCTTC 1 cut(s) 624
EarI CTCTTC 1 cut(s) 624
Ecl136II GAGCTC 2 cut(s) 836, 1091
Eco130I CCWWGG 4 cut(s) 445, 522, 1228, 1377
Eco24I GRGCYC 3 cut(s) 440, 838, 1093
Eco47I GGWCC 4 cut(s) 77, 160, 603, 1118
Eco53kI GAGCTC 2 cut(s) 836, 1091
Eco57I CTGAAG 2 cut(s) 102, 674
Eco88I CYCGRG 1 cut(s) 175
Eco91I GGTNACC 1 cut(s) 170
EcoICRI GAGCTC 2 cut(s) 836, 1091
EcoO109I RGGNCCY 2 cut(s) 77, 912
EcoO65I GGTNACC 1 cut(s) 170
EcoRI GAATTC 2 cut(s) 662, 1103
EcoRII CCWGG 2 cut(s) 324, 454
EcoT14I CCWWGG 4 cut(s) 445, 522, 1228, 1377
EcoT38I GRGCYC 3 cut(s) 440, 838, 1093
ErhI CCWWGG 4 cut(s) 445, 522, 1228, 1377
FalI AAGNNNNNCTT 4 cut(s) 531, 563, 924, 956
FaqI GGGAC 1 cut(s) 1601
FauNDI CATATG 1 cut(s) 559
FblI GTMKAC 3 cut(s) 552, 768, 1524
FokI GGATG 4 cut(s) 220, 836, 1562, 1628
FriOI GRGCYC 3 cut(s) 440, 838, 1093
FspBI CTAG 6 cut(s) 482, 509, 902, 1283, 1338, 1407
GlaI GCGC 1 cut(s) 1351
GsuI CTGGAG 1 cut(s) 1109
HaeII RGCGCY 1 cut(s) 1353
HaeIII GGCC 2 cut(s) 117, 914
HapII CCGG 2 cut(s) 158, 176
HhaI GCGC 1 cut(s) 1352
Hin6I GCGC 1 cut(s) 1350
HinP1I GCGC 1 cut(s) 1350
HincII GTYRAC 1 cut(s) 620
HindII GTYRAC 1 cut(s) 620
HindIII AAGCTT 1 cut(s) 282
HinfI GANTC 1 cut(s) 1508
HpaII CCGG 2 cut(s) 158, 176
HphI GGTGA 2 cut(s) 1217, 1718
Hpy166II GTNNAC 5 cut(s) 553, 620, 769, 1121, 1525
Hpy188I TCNGA 4 cut(s) 780, 949, 1312, 1716
Hpy188III TCNNGA 4 cut(s) 37, 80, 1126, 1466
Hpy8I GTNNAC 5 cut(s) 553, 620, 769, 1121, 1525
HpyAV CCTTC 5 cut(s) 349, 1580, 1586, 1677, 1697
HpyCH4III ACNGT 5 cut(s) 925, 1070, 1118, 1664, 1681
HpyCH4IV ACGT 1 cut(s) 1422
HpyF10VI GCNNNNNNNGC 2 cut(s) 114, 223
HpyF3I CTNAG 3 cut(s) 803, 1552, 1611
HpySE526I ACGT 1 cut(s) 1422
HspAI GCGC 1 cut(s) 1350
Kzo9I GATC 5 cut(s) 184, 394, 679, 1342, 1539
LmnI GCTCC 1 cut(s) 39
LweI GCATC 5 cut(s) 40, 213, 532, 1584, 1650
MaeI CTAG 6 cut(s) 482, 509, 902, 1283, 1338, 1407
MaeII ACGT 1 cut(s) 1422
MaeIII GTNAC 5 cut(s) 170, 742, 1064, 1418, 1706
MalI GATC 5 cut(s) 186, 396, 681, 1344, 1541
MboI GATC 5 cut(s) 184, 394, 679, 1342, 1539
MflI RGATCY 2 cut(s) 679, 1539
MhlI GDGCHC 5 cut(s) 440, 838, 1022, 1093, 1337
MlyI GAGTC 1 cut(s) 1502
MmeI TCCRAC 1 cut(s) 1674
MnlI CCTC 9 cut(s) 300, 693, 867, 955, 983, 1259, 1559, 1734, 1750
MroXI GAANNNNTTC 2 cut(s) 662, 1221
MseI TTAA 8 cut(s) 144, 258, 810, 840, 870, 930, 1008, 1494
MslI CAYNNNNRTG 2 cut(s) 468, 1044
MspA1I CMGCKG 1 cut(s) 802
MspCI CTTAAG 1 cut(s) 839
MspI CCGG 2 cut(s) 158, 176
MspR9I CCNGG 4 cut(s) 176, 177, 326, 456
MvaI CCWGG 2 cut(s) 326, 456
MwoI GCNNNNNNNGC 2 cut(s) 114, 223
NciI CCSGG 2 cut(s) 176, 177
NcoI CCATGG 2 cut(s) 445, 1377
NdeI CATATG 1 cut(s) 559
NdeII GATC 5 cut(s) 184, 394, 679, 1342, 1539
NlaIV GGNNCC 3 cut(s) 681, 913, 1375
NmuCI GTSAC 2 cut(s) 742, 1706
NspI RCATGY 1 cut(s) 577
PdmI GAANNNNTTC 2 cut(s) 662, 1221
PinAI ACCGGT 1 cut(s) 157
PleI GAGTC 1 cut(s) 1502
PpsI GAGTC 1 cut(s) 1502
PpuMI RGGWCCY 1 cut(s) 77
PshBI ATTAAT 1 cut(s) 1008
Psp124BI GAGCTC 2 cut(s) 838, 1093
Psp5II RGGWCCY 1 cut(s) 77
Psp6I CCWGG 2 cut(s) 324, 454
PspEI GGTNACC 1 cut(s) 170
PspGI CCWGG 2 cut(s) 324, 454
PspN4I GGNNCC 3 cut(s) 681, 913, 1375
PspPI GGNCC 6 cut(s) 77, 116, 160, 603, 912, 1118
PspPPI RGGWCCY 1 cut(s) 77
PsuI RGATCY 2 cut(s) 679, 1539
PvuII CAGCTG 1 cut(s) 802
RsaI GTAC 2 cut(s) 520, 1053
RsaNI GTAC 2 cut(s) 519, 1052
RseI CAYNNNNRTG 2 cut(s) 468, 1044
SacI GAGCTC 2 cut(s) 838, 1093
SaqAI TTAA 8 cut(s) 144, 258, 810, 840, 870, 930, 1008, 1494
Sau3AI GATC 5 cut(s) 184, 394, 679, 1342, 1539
Sau96I GGNCC 6 cut(s) 77, 116, 160, 603, 912, 1118
SchI GAGTC 1 cut(s) 1502
ScrFI CCNGG 4 cut(s) 176, 177, 326, 456
SduI GDGCHC 5 cut(s) 440, 838, 1022, 1093, 1337
SfaNI GCATC 5 cut(s) 40, 213, 532, 1584, 1650
SfcI CTRYAG 2 cut(s) 769, 1444
SinI GGWCC 4 cut(s) 77, 160, 603, 1118
SmaI CCCGGG 1 cut(s) 177
SmiMI CAYNNNNRTG 2 cut(s) 468, 1044
SmlI CTYRAG 2 cut(s) 218, 839
SmoI CTYRAG 2 cut(s) 218, 839
SspMI CTAG 6 cut(s) 482, 509, 902, 1283, 1338, 1407
SstI GAGCTC 2 cut(s) 838, 1093
StyD4I CCNGG 4 cut(s) 174, 175, 324, 454
StyI CCWWGG 4 cut(s) 445, 522, 1228, 1377
TaaI ACNGT 5 cut(s) 925, 1070, 1118, 1664, 1681
TaiI ACGT 1 cut(s) 1425
TaqI TCGA 3 cut(s) 139, 383, 1754
Tru1I TTAA 8 cut(s) 144, 258, 810, 840, 870, 930, 1008, 1494
Tru9I TTAA 8 cut(s) 144, 258, 810, 840, 870, 930, 1008, 1494
TscAI CASTG 2 cut(s) 115, 605
TseFI GTSAC 2 cut(s) 742, 1706
Tsp45I GTSAC 2 cut(s) 742, 1706
TspGWI ACGGA 1 cut(s) 692
TspMI CCCGGG 1 cut(s) 175
TspRI CASTG 2 cut(s) 115, 605
Vha464I CTTAAG 1 cut(s) 839
VpaK11BI GGWCC 4 cut(s) 77, 160, 603, 1118
VspI ATTAAT 1 cut(s) 1008
XapI RAATTY 6 cut(s) 276, 662, 1103, 1129, 1156, 1489
XceI RCATGY 1 cut(s) 577
XmaI CCCGGG 1 cut(s) 175
XmiI GTMKAC 3 cut(s) 552, 768, 1524
XmnI GAANNNNTTC 2 cut(s) 662, 1221
XspI CTAG 6 cut(s) 482, 509, 902, 1283, 1338, 1407
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.