Rh1BG079300

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
OG0000107
Physical Location & Seq
Reverse (-)
12384108 .. 12386420
2313 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG079300.1

Sequence Viewer

Length: 1800 bp
ATGCAGCGACTAATCCTCATATCAGCCTATTGCATATTAATGTCAATGGCTTTCTTCAAGGTGTGCCATAATGCATGCACAGAATCAGAGTGTGGTGACCATGATGATCATCGCCTTGCTATTCATGTCCCGGTCAAGCGCGTCCGTTGTGGTCATTTTCAGCAGCAGAGCGACAAGACGGTTGTTGAGCAGAAGCAAATGGTAGTAAAATTCTTTGTGAAACACATAGATTATAAGCACCAGAAAATTCAAGTACATATTCCAGATGATTGCTTACTCCTAAAGCAATTAGAAACCCCAAACATGAAGCCAATGTTCTTTCCTTCCAACTTCCCATCAGGCTACGATGAGGATTGCATCGGCTTATTCAACTGTCCCACAGCTATTTATCCGCACAAACAACTGAAACAAGTCCCCTGCCTCAGTGACCTGGTATACAAAAATATCTATGCCGTTTCTTCATTCGCTCAAGCCCCACAGTACTGTACAAAGATGTATGATTTAATAAATCCATACGGACATGTGCATCCAGAAAACTATCTTTGGTGGTCTACACCAAATTGTGCAGAATGTGAAGCGAAGCGTAAGAAGTGTCAATTGAAGATCAACGGCACCAAAAGTGAAATTGAATGTGTTCATTTTAGCAAACCAAGTGCAACAAAAACATTAGTGTCTACAGGTGCAACTGTGACTACAATCATTTTACTAATATCGGTGACTGTAGTCTATAGATCTCATAAAAAGGAAAAGGAGAATCAATTGAAAATTGAAACATTCCTAGAGGATTACAAAGCGCTCAAGCCAAGCAGATATTCCTACGCAGATATCAAAAGAATTACAAATCAATTTGAGGACAAGTTGGGCCAAGGAGCGTATGGAACTGTTTTCAAAGGGAAGCTTTCATCTGAAGTTTTTGTTGCTGTTAAAGTCCTCAACAATTCCGAAAACGGAGATGGGGAAGAATTCATCAATGAGGTGGGAACAATGGGTCATATCCACCATGTCAACGTGGTTCGCATGGTTGGCTTCTGTGCAGAAGGATTTAGACGAGCTCTTGTTTATGAGTTTTTCCCCAATGGTTCACTACAGGATTTCATTTCATCAGCAGACAATAAGAATTCTTTCCTTGGTTGGGATAAGTTAAAAGATATTTCTCTAGGCATTGCCAAAGGAATTGAATATCTACACCAAGGATGCGATCAACGAATTCTTCATTTTGATATCAAACCTCAAAATGTTTTGCTAGATCAAAACTTCACTCCAAAAATATCTGATTTTGGGATGTCCAAGTTGTGTGCCAAGGATCAAAGCATAGTGTCAATGACTATGGCTAGGGGGACTATAGGCTATATTGCACCTGAAGTGTTCTCCCGGAATTTTGGAAATGTGTCATATAAGTCAGATGTCTATAGTTTTGGAATGTTGTTGCTCGAGATTGTAGGAGGGAGGAAGAATATTGGTGAAACCATGGATAACACTGGGGAAGTATACTACCCAGAATGGATACATAATCTTTTAGATGAAGGGGAAGACCTTCGAGTCCATATTGGGGAAGAAGGATCGAGAATAGATTCTCGAATTCCAAAAGAACTAGCAATTGTAGGCCTTTGGTGTATCCAATGGCACCCAATGAATCGTCCATCCATGAAATCAGTGGTTCAGATGTTGGGAGGAAGACAAAACTTAACCATGCCACCGAATCCTTTTGCCCCTACAGGTCCTACAAGAACAAATGCAACAAGTCGCCCGGCTGCAAGACGCTTCAACCTCGACTTAGAAGCAATTGTTGAATTAGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase

Protein Analysis

599

Amino Acids

67.98

Weight (kDa)

7.8

Isoelectric Point (pI)

44.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 282 - 556 3.6e-46 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 283 - 554 6.6e-47 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 234
AasI GACNNNNNNGTC 1 cut(s) 1538
AccB1I GGYRCC 2 cut(s) 611, 1623
AccI GTMKAC 4 cut(s) 435, 551, 674, 1488
AccII CGCG 1 cut(s) 141
AciI CCGC 1 cut(s) 392
AclWI GGATC 2 cut(s) 1311, 1567
AcsI RAATTY 7 cut(s) 209, 246, 962, 1117, 1206, 1375, 1578
AcuI CTGAAG 2 cut(s) 927, 1380
AfaI GTAC 3 cut(s) 255, 482, 487
AfeI AGCGCT 1 cut(s) 795
AfiI CCNNNNNNNGG 2 cut(s) 1132, 1549
AflIII ACRYGT 1 cut(s) 520
AjnI CCWGG 1 cut(s) 429
AjuI GAANNNNNNNTTGG 2 cut(s) 796, 828
AluBI AGCT 3 cut(s) 383, 898, 1052
AluI AGCT 3 cut(s) 383, 898, 1052
Alw21I GWGCWC 1 cut(s) 1054
AlwI GGATC 2 cut(s) 1311, 1567
Ama87I CYCGRG 1 cut(s) 1430
Aor51HI AGCGCT 1 cut(s) 795
AoxI GGCC 2 cut(s) 862, 1603
ApeKI GCWGC 3 cut(s) 4, 163, 1751
ApoI RAATTY 7 cut(s) 209, 246, 962, 1117, 1206, 1375, 1578
AseI ATTAAT 1 cut(s) 38
Asp700I GAANNNNTTC 4 cut(s) 633, 1121, 1533, 1570
AspLEI GCGC 2 cut(s) 141, 796
AspS9I GGNCC 2 cut(s) 862, 1718
AsuC2I CCSGG 3 cut(s) 131, 1372, 1748
AsuHPI GGTGA 3 cut(s) 107, 727, 1472
AvaI CYCGRG 1 cut(s) 1430
AvaII GGWCC 1 cut(s) 1718
BanI GGYRCC 2 cut(s) 611, 1623
BanII GRGCYC 1 cut(s) 1054
BbsI GAAGAC 2 cut(s) 1536, 1681
Bbv12I GWGCWC 1 cut(s) 1054
BbvI GCAGC 3 cut(s) 16, 175, 1738
BccI CCATC 3 cut(s) 343, 947, 1648
BceAI ACGGC 2 cut(s) 437, 625
BciT130I CCWGG 1 cut(s) 431
BciVI GTATCC 2 cut(s) 1497, 1625
BclI TGATCA 1 cut(s) 106
BcnI CCSGG 3 cut(s) 131, 1372, 1748
BfaI CTAG 5 cut(s) 779, 1157, 1244, 1332, 1592
BfmI CTRYAG 7 cut(s) 675, 720, 727, 1085, 1341, 1408, 1713
BfoI RGCGCY 1 cut(s) 797
BfuI GTATCC 2 cut(s) 1497, 1625
BglII AGATCT 1 cut(s) 731
BisI GCNGC 3 cut(s) 5, 164, 1752
BlsI GCNGC 3 cut(s) 6, 165, 1753
BmcAI AGTACT 1 cut(s) 482
Bme1390I CCNGG 4 cut(s) 131, 431, 1372, 1748
Bme18I GGWCC 1 cut(s) 1718
BmeT110I CYCGRG 1 cut(s) 1430
BmgT120I GGNCC 2 cut(s) 862, 1718
BmiI GGNNCC 2 cut(s) 613, 1625
BmrFI CCNGG 4 cut(s) 131, 431, 1372, 1748
BmrI ACTGGG 1 cut(s) 1488
BmsI GCATC 3 cut(s) 366, 535, 1184
BmuI ACTGGG 1 cut(s) 1488
BoxI GACNNNNGTC 1 cut(s) 722
BpiI GAAGAC 2 cut(s) 1536, 1681
BpuEI CTTGAG 2 cut(s) 453, 782
BpuMI CCSGG 3 cut(s) 131, 1372, 1748
BsaBI GATNNNNATC 1 cut(s) 108
BsaJI CCNNGG 5 cut(s) 865, 1126, 1189, 1299, 1467
Bsc4I CCNNNNNNNGG 2 cut(s) 1132, 1549
Bse1I ACTGG 1 cut(s) 1483
Bse3DI GCAATG 1 cut(s) 1161
Bse8I GATNNNNATC 1 cut(s) 108
BseBI CCWGG 1 cut(s) 431
BseDI CCNNGG 5 cut(s) 865, 1126, 1189, 1299, 1467
BseGI GGATG 4 cut(s) 526, 1199, 1287, 1640
BseJI GATNNNNATC 1 cut(s) 108
BseLI CCNNNNNNNGG 2 cut(s) 1132, 1549
BseMI GCAATG 1 cut(s) 1161
BseMII CTCAG 1 cut(s) 436
BseNI ACTGG 1 cut(s) 1483
BseXI GCAGC 3 cut(s) 16, 175, 1738
BsgI GTGCAG 2 cut(s) 585, 1053
Bsh1236I CGCG 1 cut(s) 141
BshFI GGCC 2 cut(s) 864, 1605
BshNI GGYRCC 2 cut(s) 611, 1623
BsiHKAI GWGCWC 1 cut(s) 1054
BsiHKCI CYCGRG 1 cut(s) 1430
BsiSI CCGG 3 cut(s) 131, 1372, 1748
BslFI GGGAC 4 cut(s) 113, 360, 398, 1351
BslI CCNNNNNNNGG 2 cut(s) 1132, 1549
BsmFI GGGAC 4 cut(s) 113, 360, 398, 1351
BsnI GGCC 2 cut(s) 864, 1605
BsoBI CYCGRG 1 cut(s) 1430
Bsp1286I GDGCHC 1 cut(s) 1054
Bsp1407I TGTACA 1 cut(s) 485
Bsp143I GATC 7 cut(s) 106, 603, 731, 1198, 1246, 1303, 1559
Bsp19I CCATGG 1 cut(s) 1467
BspACI CCGC 1 cut(s) 392
BspANI GGCC 2 cut(s) 864, 1605
BspCNI CTCAG 1 cut(s) 435
BspFNI CGCG 1 cut(s) 141
BspLI GGNNCC 2 cut(s) 613, 1625
BspPI GGATC 2 cut(s) 1311, 1567
BspT107I GGYRCC 2 cut(s) 611, 1623
BsrDI GCAATG 1 cut(s) 1161
BsrGI TGTACA 1 cut(s) 485
BsrI ACTGG 1 cut(s) 1483
BssECI CCNNGG 5 cut(s) 865, 1126, 1189, 1299, 1467
BssMI GATC 7 cut(s) 106, 603, 731, 1198, 1246, 1303, 1559
BssNAI GTATAC 2 cut(s) 436, 1489
BssT1I CCWWGG 5 cut(s) 865, 1126, 1189, 1299, 1467
Bst1107I GTATAC 2 cut(s) 436, 1489
Bst2UI CCWGG 1 cut(s) 431
Bst4CI ACNGT 7 cut(s) 181, 374, 480, 485, 688, 721, 883
BstAUI TGTACA 1 cut(s) 485
BstC8I GCNNGC 1 cut(s) 76
BstDEI CTNAG 2 cut(s) 422, 1774
BstDSI CCRYGG 1 cut(s) 1467
BstEII GGTNACC 1 cut(s) 95
BstF5I GGATG 4 cut(s) 526, 1199, 1287, 1640
BstFNI CGCG 1 cut(s) 141
BstH2I RGCGCY 1 cut(s) 797
BstHHI GCGC 2 cut(s) 141, 796
BstKTI GATC 7 cut(s) 109, 606, 734, 1201, 1249, 1306, 1562
BstMBI GATC 7 cut(s) 106, 603, 731, 1198, 1246, 1303, 1559
BstMWI GCNNNNNNNGC 1 cut(s) 1023
BstNI CCWGG 1 cut(s) 431
BstNSI RCATGY 2 cut(s) 78, 524
BstPAI GACNNNNGTC 1 cut(s) 722
BstPI GGTNACC 1 cut(s) 95
BstSCI CCNGG 4 cut(s) 129, 429, 1370, 1746
BstSFI CTRYAG 7 cut(s) 675, 720, 727, 1085, 1341, 1408, 1713
BstUI CGCG 1 cut(s) 141
BstV1I GCAGC 3 cut(s) 16, 175, 1738
BstV2I GAAGAC 2 cut(s) 1536, 1681
BstX2I RGATCY 1 cut(s) 731
BstYI RGATCY 1 cut(s) 731
BstZ17I GTATAC 2 cut(s) 436, 1489
BsuI GTATCC 2 cut(s) 1497, 1625
BsuRI GGCC 2 cut(s) 864, 1605
BtgI CCRYGG 1 cut(s) 1467
BtgZI GCGATG 1 cut(s) 95
BtsCI GGATG 4 cut(s) 526, 1199, 1287, 1640
BtsIMutI CAGTG 3 cut(s) 430, 1476, 1659
Cac8I GCNNGC 1 cut(s) 76
CfoI GCGC 2 cut(s) 141, 796
Cfr13I GGNCC 2 cut(s) 862, 1718
CseI GACGC 2 cut(s) 130, 1767
CsiI ACCWGGT 1 cut(s) 429
Csp6I GTAC 3 cut(s) 254, 481, 486
CviQI GTAC 3 cut(s) 254, 481, 486
DdeI CTNAG 2 cut(s) 422, 1774
DpnI GATC 7 cut(s) 108, 605, 733, 1200, 1248, 1305, 1561
DpnII GATC 7 cut(s) 106, 603, 731, 1198, 1246, 1303, 1559
DrdI GACNNNNNNGTC 1 cut(s) 1538
DseDI GACNNNNNNGTC 1 cut(s) 1538
Ecl136II GAGCTC 1 cut(s) 1052
Eco130I CCWWGG 5 cut(s) 865, 1126, 1189, 1299, 1467
Eco147I AGGCCT 1 cut(s) 1605
Eco24I GRGCYC 1 cut(s) 1054
Eco32I GATATC 2 cut(s) 826, 1222
Eco47I GGWCC 1 cut(s) 1718
Eco47III AGCGCT 1 cut(s) 795
Eco53kI GAGCTC 1 cut(s) 1052
Eco57I CTGAAG 2 cut(s) 927, 1380
Eco88I CYCGRG 1 cut(s) 1430
Eco91I GGTNACC 1 cut(s) 95
EcoICRI GAGCTC 1 cut(s) 1052
EcoO109I RGGNCCY 1 cut(s) 1718
EcoO65I GGTNACC 1 cut(s) 95
EcoRI GAATTC 4 cut(s) 962, 1117, 1206, 1578
EcoRII CCWGG 1 cut(s) 429
EcoRV GATATC 2 cut(s) 826, 1222
EcoT14I CCWWGG 5 cut(s) 865, 1126, 1189, 1299, 1467
EcoT22I ATGCAT 1 cut(s) 76
EcoT38I GRGCYC 1 cut(s) 1054
ErhI CCWWGG 5 cut(s) 865, 1126, 1189, 1299, 1467
FalI AAGNNNNNCTT 2 cut(s) 882, 914
FaqI GGGAC 4 cut(s) 113, 360, 398, 1351
FbaI TGATCA 1 cut(s) 106
FblI GTMKAC 4 cut(s) 435, 551, 674, 1488
Fnu4HI GCNGC 3 cut(s) 5, 164, 1752
FokI GGATG 4 cut(s) 513, 1206, 1294, 1627
FriOI GRGCYC 1 cut(s) 1054
Fsp4HI GCNGC 3 cut(s) 5, 164, 1752
FspBI CTAG 5 cut(s) 779, 1157, 1244, 1332, 1592
GlaI GCGC 2 cut(s) 140, 795
GluI GCNGC 3 cut(s) 5, 164, 1752
HaeII RGCGCY 1 cut(s) 797
HaeIII GGCC 2 cut(s) 864, 1605
HapII CCGG 3 cut(s) 131, 1372, 1748
HgaI GACGC 2 cut(s) 130, 1767
HhaI GCGC 2 cut(s) 141, 796
Hin6I GCGC 2 cut(s) 139, 794
HinP1I GCGC 2 cut(s) 139, 794
HincII GTYRAC 1 cut(s) 1006
HindII GTYRAC 1 cut(s) 1006
HindIII AAGCTT 1 cut(s) 896
HinfI GANTC 6 cut(s) 83, 754, 1539, 1571, 1633, 1699
HpaII CCGG 3 cut(s) 131, 1372, 1748
HphI GGTGA 3 cut(s) 107, 727, 1472
Hpy166II GTNNAC 6 cut(s) 436, 552, 675, 1006, 1082, 1489
Hpy188I TCNGA 6 cut(s) 88, 907, 943, 1273, 1402, 1662
Hpy188III TCNNGA 5 cut(s) 263, 530, 1432, 1563, 1575
Hpy8I GTNNAC 6 cut(s) 436, 552, 675, 1006, 1082, 1489
HpyAV CCTTC 5 cut(s) 333, 1031, 1517, 1544, 1550
HpyCH4III ACNGT 7 cut(s) 181, 374, 480, 485, 688, 721, 883
HpyCH4IV ACGT 1 cut(s) 1008
HpyF10VI GCNNNNNNNGC 1 cut(s) 1023
HpyF3I CTNAG 2 cut(s) 422, 1774
HpySE526I ACGT 1 cut(s) 1008
HspAI GCGC 2 cut(s) 139, 794
Ksp22I TGATCA 1 cut(s) 106
Kzo9I GATC 7 cut(s) 106, 603, 731, 1198, 1246, 1303, 1559
LmnI GCTCC 1 cut(s) 869
Lsp1109I GCAGC 3 cut(s) 16, 175, 1738
LweI GCATC 3 cut(s) 366, 535, 1184
MabI ACCWGGT 1 cut(s) 429
MaeI CTAG 5 cut(s) 779, 1157, 1244, 1332, 1592
MaeII ACGT 1 cut(s) 1008
MaeIII GTNAC 4 cut(s) 95, 425, 688, 715
MalI GATC 7 cut(s) 108, 605, 733, 1200, 1248, 1305, 1561
MboI GATC 7 cut(s) 106, 603, 731, 1198, 1246, 1303, 1559
MboII GAAGA 9 cut(s) 46, 450, 613, 971, 1202, 1462, 1541, 1565, 1686
MfeI CAATTG 4 cut(s) 596, 758, 1596, 1782
MflI RGATCY 1 cut(s) 731
MhlI GDGCHC 1 cut(s) 1054
MlyI GAGTC 1 cut(s) 1548
MmeI TCCRAC 1 cut(s) 351
Mph1103I ATGCAT 1 cut(s) 76
MroXI GAANNNNTTC 4 cut(s) 633, 1121, 1533, 1570
MseI TTAA 5 cut(s) 38, 503, 924, 1142, 1685
MslI CAYNNNNRTG 1 cut(s) 38
MspI CCGG 3 cut(s) 131, 1372, 1748
MspR9I CCNGG 4 cut(s) 131, 431, 1372, 1748
MunI CAATTG 4 cut(s) 596, 758, 1596, 1782
MvaI CCWGG 1 cut(s) 431
MvnI CGCG 1 cut(s) 141
MwoI GCNNNNNNNGC 1 cut(s) 1023
NciI CCSGG 3 cut(s) 131, 1372, 1748
NcoI CCATGG 1 cut(s) 1467
NdeII GATC 7 cut(s) 106, 603, 731, 1198, 1246, 1303, 1559
NlaIV GGNNCC 2 cut(s) 613, 1625
NmuCI GTSAC 4 cut(s) 95, 425, 688, 715
NsiI ATGCAT 1 cut(s) 76
NspI RCATGY 2 cut(s) 78, 524
PaeI GCATGC 1 cut(s) 78
PaeR7I CTCGAG 1 cut(s) 1430
PceI AGGCCT 1 cut(s) 1605
PciI ACATGT 1 cut(s) 520
PdmI GAANNNNTTC 4 cut(s) 633, 1121, 1533, 1570
PfeI GAWTC 5 cut(s) 83, 754, 1571, 1633, 1699
PfoI TCCNGGA 1 cut(s) 1370
PkrI GCNGC 3 cut(s) 6, 165, 1753
PleI GAGTC 1 cut(s) 1547
PpsI GAGTC 1 cut(s) 1547
PpuMI RGGWCCY 1 cut(s) 1718
PscI ACATGT 1 cut(s) 520
PshAI GACNNNNGTC 1 cut(s) 722
PshBI ATTAAT 1 cut(s) 38
PsiI TTATAA 1 cut(s) 234
Psp124BI GAGCTC 1 cut(s) 1054
Psp5II RGGWCCY 1 cut(s) 1718
Psp6I CCWGG 1 cut(s) 429
PspEI GGTNACC 1 cut(s) 95
PspGI CCWGG 1 cut(s) 429
PspN4I GGNNCC 2 cut(s) 613, 1625
PspPI GGNCC 2 cut(s) 862, 1718
PspPPI RGGWCCY 1 cut(s) 1718
PsuI RGATCY 1 cut(s) 731
RsaI GTAC 3 cut(s) 255, 482, 487
RsaNI GTAC 3 cut(s) 254, 481, 486
RseI CAYNNNNRTG 1 cut(s) 38
SacI GAGCTC 1 cut(s) 1054
SaqAI TTAA 5 cut(s) 38, 503, 924, 1142, 1685
SatI GCNGC 3 cut(s) 5, 164, 1752
Sau3AI GATC 7 cut(s) 106, 603, 731, 1198, 1246, 1303, 1559
Sau96I GGNCC 2 cut(s) 862, 1718
ScaI AGTACT 1 cut(s) 482
SchI GAGTC 1 cut(s) 1548
ScrFI CCNGG 4 cut(s) 131, 431, 1372, 1748
SduI GDGCHC 1 cut(s) 1054
SexAI ACCWGGT 1 cut(s) 429
SfaNI GCATC 3 cut(s) 366, 535, 1184
SfcI CTRYAG 7 cut(s) 675, 720, 727, 1085, 1341, 1408, 1713
Sfr274I CTCGAG 1 cut(s) 1430
SinI GGWCC 1 cut(s) 1718
SlaI CTCGAG 1 cut(s) 1430
SmiMI CAYNNNNRTG 1 cut(s) 38
SmlI CTYRAG 3 cut(s) 468, 797, 1430
SmoI CTYRAG 3 cut(s) 468, 797, 1430
SphI GCATGC 1 cut(s) 78
SseBI AGGCCT 1 cut(s) 1605
SsiI CCGC 1 cut(s) 392
SspI AATATT 1 cut(s) 1456
SspMI CTAG 5 cut(s) 779, 1157, 1244, 1332, 1592
SstI GAGCTC 1 cut(s) 1054
StuI AGGCCT 1 cut(s) 1605
StyD4I CCNGG 4 cut(s) 129, 429, 1370, 1746
StyI CCWWGG 5 cut(s) 865, 1126, 1189, 1299, 1467
TaaI ACNGT 7 cut(s) 181, 374, 480, 485, 688, 721, 883
TaiI ACGT 1 cut(s) 1011
TaqI TCGA 5 cut(s) 1431, 1537, 1562, 1576, 1770
TatI WGTACW 3 cut(s) 253, 480, 485
TfiI GAWTC 5 cut(s) 83, 754, 1571, 1633, 1699
Tru1I TTAA 5 cut(s) 38, 503, 924, 1142, 1685
Tru9I TTAA 5 cut(s) 38, 503, 924, 1142, 1685
TscAI CASTG 3 cut(s) 430, 1483, 1659
TseFI GTSAC 4 cut(s) 95, 425, 688, 715
TseI GCWGC 3 cut(s) 4, 163, 1751
Tsp45I GTSAC 4 cut(s) 95, 425, 688, 715
TspGWI ACGGA 3 cut(s) 134, 531, 963
TspRI CASTG 3 cut(s) 430, 1483, 1659
VpaK11BI GGWCC 1 cut(s) 1718
VspI ATTAAT 1 cut(s) 38
XapI RAATTY 7 cut(s) 209, 246, 962, 1117, 1206, 1375, 1578
XceI RCATGY 2 cut(s) 78, 524
XcmI CCANNNNNNNNNTGG 2 cut(s) 872, 1651
XhoI CTCGAG 1 cut(s) 1430
XmiI GTMKAC 4 cut(s) 435, 551, 674, 1488
XmnI GAANNNNTTC 4 cut(s) 633, 1121, 1533, 1570
XspI CTAG 5 cut(s) 779, 1157, 1244, 1332, 1592
ZrmI AGTACT 1 cut(s) 482
Zsp2I ATGCAT 1 cut(s) 76
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.