RchiOBHm_Chr1g0333431

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000107
Physical Location & Seq
Forward (+)
25562096 .. 25564415
2320 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ56223

Sequence Viewer

Length: 1806 bp
ATGCAGCGAACTCTCATCTCTTTCTTTTGCTTCGTCTTCCTGCAGGCTTTCTCATCCAAAGTCCTTTGTGAAAACCAAAACACCTGCAGAGAGTTCAAGTGTGGGAAACATGGCCCAGCTATCAGATTCCCTTTTAGCCTCAAAGGTAGCCACCCAGAAAATTGTGGGTATCCTGGGTTTCTTGTATCCTGCAATGAAAACAAGGAAACCATTCTTGAGCTGCCAATCCCAGTCAAATTCGCAATCAAAACCATAGACTATAAGAATCAGCAAATCGAGCTATATGACCCAGAAAATTGCTTGCTGGTGAAGCTATTGAAAGTCCAGAACATGTCAATCTCTCCCTTCCACTACTTGGAAGGCCAAATGAAAGATATTACCTTGTTCAATTGTTCCTCAGCTGAAAGGGAATCGGTATACTATATGGACCAAGTCCCCTGCTTGAGTGGCCCTGTCTACCAAATTTCATCGCCTCATTATGTGGACATTTTGATTCATGACCTTCCCCTTCTGTCTTGTACGAAGATCTCTAATTATTCCTCAGTTCCATACATGGCGTATGATCATCAAAATGTTTCTTTGGACTGGACGGAGCCAAATTGCAGACCATGCGAAGCATACGGCAACAAATGTGGATTGAAGAACAATGGCACCAAAAGTACCGAAATTGAATGCCTTTATAGGAAAGGAGGTCCATTCCTGGCTACATTTGTACTGCTACTACTTGTCACTGCAGTTTATCGTGTCCGCAGTTGTCTTGACAGAAAAGAAAAAGAGAATCAATTAAAAATTGAACTATTTTTAGAGAATTACAGAGCACTCAAACCAAGCAGATATTCTTATGCAGATATTAAGAGGATTACAAATCAATTCAAGGTCAAATTAGGCCAAGGAGCCTATGGGACTGTTTTTAAGGGAAAACTTTCTGCCGAATGTTTTGTTGCAGTGAAAGTCCTCAATAGTACTAAGGGGAATGGGGAAGAGTTTGTAAATGAAGTACGAACAATGGGACATATCCATCATGTCAATGTGGTTCGATTGGTTGGATTCTGTGCGGATGGATTTAGACGAGCTCTTGTTTATGACTTCTTACCTAATGGTTCACTACAAGATTTCATTTCATCAGCAGACAATAACAATTCTTTCCTTGGTTGGGGTAAGTTGCAAGACATTTCTCTTGGAATAGCAAAAGGAATTGAATATCTGCACCAAGGATGCAATCAACGGATCCTACATTTTGATATCAAACCCCATAATGTTTTGCTAGACCATAACTTCAATGCAAAGATTTCCGATTTTGGTTTGGCCAAGTTATGTTCCAAGGATCAAAGCATAGTGTCAATGACTACCGCCAGGGGAACGATGGGGTACATTGCACCTGAAGTGTTCTCCAGAAACTTTGGAAATGTGTCCTATAAGTCAGATGTCTATAGCTATGGAATGGTACTGCTTGAGATTGTAGGAGGGAGAAAGAACATTGGTTCAACCACAGAGAACACCAATGAAATTTACTACCCAGAATGGATCTATAATCTTCTAGAAAAAAAAGATGACCTACGTATCAATGTAGGGGAAGAAGGAGATGCTAAAATTGCAAAGAGACTTGCAATTGTAGGTCTCTGGTGCATTCAATGGCACCCTGCAGATCGTCCTTCTATGCAAGGGGTGGTTCAGATGTTGGAAGAAGGAGAAAACTTAACCATGCCTCCAAATCCTTTTGCCTCTCAGGGTCCAGCAGGAACAAATACAAGTACACCTTCAAGAAATTTAAATCTCCAACTAGAAATAATTCCCGAGTTAGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase

Protein Analysis

601

Amino Acids

67.84

Weight (kDa)

7.46

Isoelectric Point (pI)

38.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 29 - 96 1.2e-17 Wall-associated receptor kinase galacturonan-binding
PK_Tyr_Ser-Thr PF07714 291 - 560 2e-44 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 292 - 558 3.7e-46 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 92
Acc36I ACCTGC 1 cut(s) 92
AccB1I GGYRCC 2 cut(s) 650, 1635
AccB7I CCANNNNNTGG 1 cut(s) 355
AccI GTMKAC 2 cut(s) 417, 456
AciI CCGC 3 cut(s) 748, 1055, 1350
AclWI GGATC 4 cut(s) 1222, 1235, 1332, 1532
AcoI YGGCCR 1 cut(s) 1305
AcsI RAATTY 4 cut(s) 236, 462, 1506, 1765
AcuI CTGAAG 1 cut(s) 1401
AfaI GTAC 8 cut(s) 520, 661, 714, 964, 999, 1370, 1446, 1753
AfiI CCNNNNNNNGG 2 cut(s) 355, 1153
AflIII ACRYGT 1 cut(s) 330
AjnI CCWGG 3 cut(s) 172, 699, 1352
AjuI GAANNNNNNNTTGG 2 cut(s) 820, 852
AluBI AGCT 7 cut(s) 119, 220, 280, 313, 401, 1073, 1434
AluI AGCT 7 cut(s) 119, 220, 280, 313, 401, 1073, 1434
Alw21I GWGCWC 2 cut(s) 820, 1075
Alw26I GTCTC 2 cut(s) 1594, 1622
AlwI GGATC 4 cut(s) 1222, 1235, 1332, 1532
Ama87I CYCGRG 1 cut(s) 1793
AoxI GGCC 5 cut(s) 112, 361, 448, 886, 1305
ApeKI GCWGC 2 cut(s) 4, 220
ApoI RAATTY 4 cut(s) 236, 462, 1506, 1765
Asp700I GAANNNNTTC 3 cut(s) 210, 922, 1788
AspS9I GGNCC 5 cut(s) 113, 427, 449, 692, 1730
AsuHPI GGTGA 1 cut(s) 319
AvaI CYCGRG 1 cut(s) 1793
AvaII GGWCC 3 cut(s) 427, 692, 1730
BaeI ACNNNNGTAYC 2 cut(s) 1543, 1576
BalI TGGCCA 1 cut(s) 1307
BamHI GGATCC 1 cut(s) 1227
BanI GGYRCC 2 cut(s) 650, 1635
BanII GRGCYC 1 cut(s) 1075
BbsI GAAGAC 1 cut(s) 28
Bbv12I GWGCWC 2 cut(s) 820, 1075
BbvCI CCTCAGC 1 cut(s) 397
BbvI GCAGC 2 cut(s) 16, 207
BccI CCATC 3 cut(s) 1026, 1052, 1357
BceAI ACGGC 1 cut(s) 637
BciT130I CCWGG 3 cut(s) 174, 701, 1354
BciVI GTATCC 2 cut(s) 180, 196
BclI TGATCA 1 cut(s) 562
BcoDI GTCTC 2 cut(s) 1594, 1622
BfaI CTAG 3 cut(s) 1265, 1538, 1781
BfmI CTRYAG 5 cut(s) 41, 85, 732, 1429, 1641
BfuAI ACCTGC 1 cut(s) 92
BfuI GTATCC 2 cut(s) 180, 196
BglII AGATCT 1 cut(s) 525
BisI GCNGC 2 cut(s) 5, 221
BlsI GCNGC 2 cut(s) 6, 222
BmcAI AGTACT 1 cut(s) 964
Bme1390I CCNGG 3 cut(s) 174, 701, 1354
Bme18I GGWCC 3 cut(s) 427, 692, 1730
BmeT110I CYCGRG 1 cut(s) 1793
BmgT120I GGNCC 5 cut(s) 113, 427, 449, 692, 1730
BmiI GGNNCC 6 cut(s) 594, 652, 895, 1229, 1637, 1731
BmrFI CCNGG 3 cut(s) 174, 701, 1354
BmrI ACTGGG 1 cut(s) 224
BmsI GCATC 2 cut(s) 1205, 1573
BmuI ACTGGG 1 cut(s) 224
BpiI GAAGAC 1 cut(s) 28
BpmI CTGGAG 1 cut(s) 1375
Bpu10I CCTNAGC 1 cut(s) 397
BpuEI CTTGAG 3 cut(s) 236, 463, 1472
BsaAI YACGTR 1 cut(s) 1559
BsaI GGTCTC 1 cut(s) 1622
BsaJI CCNNGG 6 cut(s) 173, 889, 1147, 1210, 1320, 1353
BsaXI ACNNNNNCTCC 2 cut(s) 1690, 1720
Bsc4I CCNNNNNNNGG 2 cut(s) 355, 1153
Bse1I ACTGG 2 cut(s) 230, 590
Bse3DI GCAATG 2 cut(s) 199, 1371
BseBI CCWGG 3 cut(s) 174, 701, 1354
BseDI CCNNGG 6 cut(s) 173, 889, 1147, 1210, 1320, 1353
BseGI GGATG 3 cut(s) 53, 1063, 1220
BseLI CCNNNNNNNGG 2 cut(s) 355, 1153
BseMI GCAATG 2 cut(s) 199, 1371
BseMII CTCAG 3 cut(s) 411, 555, 1739
BseNI ACTGG 2 cut(s) 230, 590
BseXI GCAGC 2 cut(s) 16, 207
BseYI CCCAGC 1 cut(s) 115
BsgI GTGCAG 1 cut(s) 1190
BshFI GGCC 5 cut(s) 114, 363, 450, 888, 1307
BshNI GGYRCC 2 cut(s) 650, 1635
BsiHKAI GWGCWC 2 cut(s) 820, 1075
BsiHKCI CYCGRG 1 cut(s) 1793
BslFI GGGAC 3 cut(s) 419, 916, 1023
BslI CCNNNNNNNGG 2 cut(s) 355, 1153
BsmAI GTCTC 2 cut(s) 1594, 1622
BsmFI GGGAC 3 cut(s) 419, 916, 1023
BsmI GAATGC 2 cut(s) 677, 1626
BsnI GGCC 5 cut(s) 114, 363, 450, 888, 1307
Bso31I GGTCTC 1 cut(s) 1622
BsoBI CYCGRG 1 cut(s) 1793
Bsp1286I GDGCHC 2 cut(s) 820, 1075
Bsp143I GATC 6 cut(s) 525, 562, 1227, 1324, 1524, 1645
BspACI CCGC 3 cut(s) 748, 1055, 1350
BspANI GGCC 5 cut(s) 114, 363, 450, 888, 1307
BspCNI CTCAG 3 cut(s) 410, 554, 1738
BspHI TCATGA 1 cut(s) 496
BspLI GGNNCC 6 cut(s) 594, 652, 895, 1229, 1637, 1731
BspMAI CTGCAG 4 cut(s) 45, 89, 736, 1645
BspMI ACCTGC 1 cut(s) 92
BspPI GGATC 4 cut(s) 1222, 1235, 1332, 1532
BspT107I GGYRCC 2 cut(s) 650, 1635
BspTNI GGTCTC 1 cut(s) 1622
BsrDI GCAATG 2 cut(s) 199, 1371
BsrI ACTGG 2 cut(s) 230, 590
BssECI CCNNGG 6 cut(s) 173, 889, 1147, 1210, 1320, 1353
BssMI GATC 6 cut(s) 525, 562, 1227, 1324, 1524, 1645
BssNAI GTATAC 1 cut(s) 418
BssT1I CCWWGG 4 cut(s) 889, 1147, 1210, 1320
Bst1107I GTATAC 1 cut(s) 418
Bst2UI CCWGG 3 cut(s) 174, 701, 1354
Bst4CI ACNGT 1 cut(s) 907
Bst6I CTCTTC 1 cut(s) 975
BstAPI GCANNNNNTGC 1 cut(s) 609
BstBAI YACGTR 1 cut(s) 1559
BstC8I GCNNGC 2 cut(s) 45, 302
BstDEI CTNAG 4 cut(s) 397, 541, 966, 1725
BstF5I GGATG 3 cut(s) 53, 1063, 1220
BstKTI GATC 6 cut(s) 528, 565, 1230, 1327, 1527, 1648
BstMAI GTCTC 2 cut(s) 1594, 1622
BstMBI GATC 6 cut(s) 525, 562, 1227, 1324, 1524, 1645
BstMWI GCNNNNNNNGC 5 cut(s) 277, 310, 447, 609, 1592
BstNI CCWGG 3 cut(s) 174, 701, 1354
BstNSI RCATGY 1 cut(s) 334
BstSCI CCNGG 3 cut(s) 172, 699, 1352
BstSFI CTRYAG 5 cut(s) 41, 85, 732, 1429, 1641
BstSNI TACGTA 1 cut(s) 1559
BstV1I GCAGC 2 cut(s) 16, 207
BstV2I GAAGAC 1 cut(s) 28
BstX2I RGATCY 3 cut(s) 525, 1227, 1524
BstYI RGATCY 3 cut(s) 525, 1227, 1524
BstZ17I GTATAC 1 cut(s) 418
BsuI GTATCC 2 cut(s) 180, 196
BsuRI GGCC 5 cut(s) 114, 363, 450, 888, 1307
BtgZI GCGATG 1 cut(s) 453
BtsCI GGATG 3 cut(s) 53, 1063, 1220
BtsI GCAGTG 2 cut(s) 729, 951
BtsIMutI CAGTG 2 cut(s) 729, 951
BveI ACCTGC 1 cut(s) 92
Cac8I GCNNGC 2 cut(s) 45, 302
CciI TCATGA 1 cut(s) 496
Cfr13I GGNCC 5 cut(s) 113, 427, 449, 692, 1730
Csp6I GTAC 8 cut(s) 519, 660, 713, 963, 998, 1369, 1445, 1752
CspCI CAANNNNNGTGG 2 cut(s) 613, 648
CviAII CATG 7 cut(s) 110, 331, 497, 553, 609, 1022, 1702
CviQI GTAC 8 cut(s) 519, 660, 713, 963, 998, 1369, 1445, 1752
DdeI CTNAG 4 cut(s) 397, 541, 966, 1725
DpnI GATC 6 cut(s) 527, 564, 1229, 1326, 1526, 1647
DpnII GATC 6 cut(s) 525, 562, 1227, 1324, 1524, 1645
DraI TTTAAA 1 cut(s) 1770
EaeI YGGCCR 1 cut(s) 1305
Eam1104I CTCTTC 1 cut(s) 975
EarI CTCTTC 1 cut(s) 975
Ecl136II GAGCTC 1 cut(s) 1073
Eco105I TACGTA 1 cut(s) 1559
Eco130I CCWWGG 4 cut(s) 889, 1147, 1210, 1320
Eco24I GRGCYC 1 cut(s) 1075
Eco31I GGTCTC 1 cut(s) 1622
Eco32I GATATC 1 cut(s) 1243
Eco47I GGWCC 3 cut(s) 427, 692, 1730
Eco53kI GAGCTC 1 cut(s) 1073
Eco57I CTGAAG 1 cut(s) 1401
Eco88I CYCGRG 1 cut(s) 1793
EcoICRI GAGCTC 1 cut(s) 1073
EcoRII CCWGG 3 cut(s) 172, 699, 1352
EcoRV GATATC 1 cut(s) 1243
EcoT14I CCWWGG 4 cut(s) 889, 1147, 1210, 1320
EcoT38I GRGCYC 1 cut(s) 1075
ErhI CCWWGG 4 cut(s) 889, 1147, 1210, 1320
FaeI CATG 7 cut(s) 113, 334, 500, 556, 612, 1025, 1705
FalI AAGNNNNNCTT 2 cut(s) 1741, 1773
FaqI GGGAC 3 cut(s) 419, 916, 1023
FatI CATG 7 cut(s) 109, 330, 496, 552, 608, 1021, 1701
FbaI TGATCA 1 cut(s) 562
FblI GTMKAC 2 cut(s) 417, 456
Fnu4HI GCNGC 2 cut(s) 5, 221
FokI GGATG 3 cut(s) 40, 1070, 1227
FriOI GRGCYC 1 cut(s) 1075
Fsp4HI GCNGC 2 cut(s) 5, 221
FspBI CTAG 3 cut(s) 1265, 1538, 1781
GluI GCNGC 2 cut(s) 5, 221
GsaI CCCAGC 1 cut(s) 119
GsuI CTGGAG 1 cut(s) 1375
HaeIII GGCC 5 cut(s) 114, 363, 450, 888, 1307
Hin1II CATG 7 cut(s) 113, 334, 500, 556, 612, 1025, 1705
HinfI GANTC 6 cut(s) 126, 265, 410, 493, 778, 1047
HphI GGTGA 1 cut(s) 319
Hpy166II GTNNAC 5 cut(s) 418, 457, 484, 1103, 1754
Hpy188I TCNGA 4 cut(s) 125, 1294, 1423, 1674
Hpy188III TCNNGA 8 cut(s) 215, 325, 497, 758, 1392, 1538, 1761, 1793
Hpy8I GTNNAC 5 cut(s) 418, 457, 484, 1103, 1754
HpyAV CCTTC 8 cut(s) 353, 355, 512, 518, 1571, 1662, 1679, 1767
HpyCH4III ACNGT 1 cut(s) 907
HpyCH4IV ACGT 1 cut(s) 1558
HpyF10VI GCNNNNNNNGC 5 cut(s) 277, 310, 447, 609, 1592
HpyF3I CTNAG 4 cut(s) 397, 541, 966, 1725
HpySE526I ACGT 1 cut(s) 1558
Hsp92II CATG 7 cut(s) 113, 334, 500, 556, 612, 1025, 1705
Ksp22I TGATCA 1 cut(s) 562
Kzo9I GATC 6 cut(s) 525, 562, 1227, 1324, 1524, 1645
LmnI GCTCC 2 cut(s) 592, 893
Lsp1109I GCAGC 2 cut(s) 16, 207
LweI GCATC 2 cut(s) 1205, 1573
MaeI CTAG 3 cut(s) 1265, 1538, 1781
MaeII ACGT 1 cut(s) 1558
MaeIII GTNAC 1 cut(s) 727
MalI GATC 6 cut(s) 527, 564, 1229, 1326, 1526, 1647
MboI GATC 6 cut(s) 525, 562, 1227, 1324, 1524, 1645
MboII GAAGA 7 cut(s) 28, 535, 652, 992, 1526, 1586, 1694
MfeI CAATTG 2 cut(s) 388, 1608
MflI RGATCY 3 cut(s) 525, 1227, 1524
MhlI GDGCHC 2 cut(s) 820, 1075
MlsI TGGCCA 1 cut(s) 1307
MluNI TGGCCA 1 cut(s) 1307
MmeI TCCRAC 3 cut(s) 1024, 1659, 1801
Mox20I TGGCCA 1 cut(s) 1307
MroXI GAANNNNTTC 3 cut(s) 210, 922, 1788
MscI TGGCCA 1 cut(s) 1307
MseI TTAA 5 cut(s) 785, 852, 912, 1697, 1769
MslI CAYNNNNRTG 2 cut(s) 570, 1026
Msp20I TGGCCA 1 cut(s) 1307
MspA1I CMGCKG 1 cut(s) 401
MspR9I CCNGG 3 cut(s) 174, 701, 1354
MunI CAATTG 2 cut(s) 388, 1608
Mva1269I GAATGC 2 cut(s) 677, 1626
MvaI CCWGG 3 cut(s) 174, 701, 1354
MwoI GCNNNNNNNGC 5 cut(s) 277, 310, 447, 609, 1592
NdeII GATC 6 cut(s) 525, 562, 1227, 1324, 1524, 1645
NlaIII CATG 7 cut(s) 113, 334, 500, 556, 612, 1025, 1705
NlaIV GGNNCC 6 cut(s) 594, 652, 895, 1229, 1637, 1731
NmuCI GTSAC 1 cut(s) 727
NspI RCATGY 1 cut(s) 334
PagI TCATGA 1 cut(s) 496
PaqCI CACCTGC 1 cut(s) 92
PciI ACATGT 1 cut(s) 330
PctI GAATGC 2 cut(s) 677, 1626
PdmI GAANNNNTTC 3 cut(s) 210, 922, 1788
PfeI GAWTC 6 cut(s) 126, 265, 410, 493, 778, 1047
PflFI GACNNNGTC 1 cut(s) 431
PflMI CCANNNNNTGG 1 cut(s) 355
PkrI GCNGC 2 cut(s) 6, 222
Ppu21I YACGTR 1 cut(s) 1559
PscI ACATGT 1 cut(s) 330
Psp124BI GAGCTC 1 cut(s) 1075
Psp6I CCWGG 3 cut(s) 172, 699, 1352
PspFI CCCAGC 1 cut(s) 115
PspGI CCWGG 3 cut(s) 172, 699, 1352
PspN4I GGNNCC 6 cut(s) 594, 652, 895, 1229, 1637, 1731
PspPI GGNCC 5 cut(s) 113, 427, 449, 692, 1730
PstI CTGCAG 4 cut(s) 45, 89, 736, 1645
PsuI RGATCY 3 cut(s) 525, 1227, 1524
PsyI GACNNNGTC 1 cut(s) 431
PvuII CAGCTG 1 cut(s) 401
RsaI GTAC 8 cut(s) 520, 661, 714, 964, 999, 1370, 1446, 1753
RsaNI GTAC 8 cut(s) 519, 660, 713, 963, 998, 1369, 1445, 1752
RseI CAYNNNNRTG 2 cut(s) 570, 1026
SacI GAGCTC 1 cut(s) 1075
SaqAI TTAA 5 cut(s) 785, 852, 912, 1697, 1769
SatI GCNGC 2 cut(s) 5, 221
Sau3AI GATC 6 cut(s) 525, 562, 1227, 1324, 1524, 1645
Sau96I GGNCC 5 cut(s) 113, 427, 449, 692, 1730
SbfI CCTGCAGG 1 cut(s) 45
ScaI AGTACT 1 cut(s) 964
ScrFI CCNGG 3 cut(s) 174, 701, 1354
SdaI CCTGCAGG 1 cut(s) 45
SduI GDGCHC 2 cut(s) 820, 1075
SfaNI GCATC 2 cut(s) 1205, 1573
SfcI CTRYAG 5 cut(s) 41, 85, 732, 1429, 1641
SinI GGWCC 3 cut(s) 427, 692, 1730
SmiI ATTTAAAT 1 cut(s) 1770
SmiMI CAYNNNNRTG 2 cut(s) 570, 1026
SmlI CTYRAG 3 cut(s) 215, 442, 1451
SmoI CTYRAG 3 cut(s) 215, 442, 1451
SnaBI TACGTA 1 cut(s) 1559
Sse8387I CCTGCAGG 1 cut(s) 45
SsiI CCGC 3 cut(s) 748, 1055, 1350
SspMI CTAG 3 cut(s) 1265, 1538, 1781
SstI GAGCTC 1 cut(s) 1075
StyD4I CCNGG 3 cut(s) 172, 699, 1352
StyI CCWWGG 4 cut(s) 889, 1147, 1210, 1320
SwaI ATTTAAAT 1 cut(s) 1770
TaaI ACNGT 1 cut(s) 907
TaiI ACGT 1 cut(s) 1561
TaqI TCGA 2 cut(s) 276, 1036
TatI WGTACW 3 cut(s) 712, 962, 1751
TfiI GAWTC 6 cut(s) 126, 265, 410, 493, 778, 1047
Tru1I TTAA 5 cut(s) 785, 852, 912, 1697, 1769
Tru9I TTAA 5 cut(s) 785, 852, 912, 1697, 1769
TscAI CASTG 2 cut(s) 736, 951
TseFI GTSAC 1 cut(s) 727
TseI GCWGC 2 cut(s) 4, 220
Tsp45I GTSAC 1 cut(s) 727
TspDTI ATGAA 8 cut(s) 210, 383, 456, 485, 1008, 1105, 1110, 1518
TspGWI ACGGA 2 cut(s) 605, 1240
TspRI CASTG 2 cut(s) 736, 951
Tth111I GACNNNGTC 1 cut(s) 431
Van91I CCANNNNNTGG 1 cut(s) 355
VpaK11BI GGWCC 3 cut(s) 427, 692, 1730
XapI RAATTY 4 cut(s) 236, 462, 1506, 1765
XbaI TCTAGA 1 cut(s) 1537
XceI RCATGY 1 cut(s) 334
XcmI CCANNNNNNNNNTGG 2 cut(s) 896, 1360
XmiI GTMKAC 2 cut(s) 417, 456
XmnI GAANNNNTTC 3 cut(s) 210, 922, 1788
XspI CTAG 3 cut(s) 1265, 1538, 1781
ZrmI AGTACT 1 cut(s) 964
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.