Rh1DG144900

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
OG0000107
Physical Location & Seq
Reverse (-)
30512743 .. 30515096
2354 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG144900.1

Sequence Viewer

Length: 1803 bp
ATGGAAGCTAGTACCTCAGAAATTCTCATTTCTTTCTTTTTTCTATCTTTCATGGCATTCTTCCAAGGGATTGAAGCATCTCAAAATGCCTGCACAGAATCCATGTGTTCTGATAATGCCCCGGCTATCCACGTCCCATTCCGCCTCAGATATCATGACCAGTCTACAGTTCTTGATGAGCAGCAGAGTGTACTAGCAAAATTCTATGTCAAACACATCGATTATATCCATCAAAGCATCGAAGTACACTCTAGCAACCCCTATGTCGACTGCCTGTTGCTAAAGCCTTTCGAAATGCCAATTTTCCCCTTCTCCTTGTACGTCTCAGAAATGAATTACTTAGATAACTTTACCTTGTTACGTTGTCCTACTGAATTTGAAATAGATACATGGGGCGAAGTCCGGTGCCTTAGTCACTCAGCTGCCTACAGAATTAAGATCTTTTATTCTGACCGTTCAGTAGTCGATGAGTCACCGTTCATACAGTCTTGTACAAAGATGTATGATGTTCTGTCATTTCCATCGGACGGTACAAGCTACTTATATTTGAATTGGTCAACACCAAATTGTACAGAATGTGAAGCAAGGGGTAAGAGGTGTAGATTCAACAGCAATGGCACCAAAAGTGGAATTGAATGTACTGACTTGGGAAAACTAAGCACAACAAGAACAAACTTCGAGGCTACAGGTACAATGCTGGTGTTCGTGATTCTGTTACTAATGCCTTTTTCGGTCTTCTGTGTCTACGGCTGGGATATGAAGGAAAAGGAAAATCAGTTACGAATTGAAAGGTTTTTAGAGGATTACAAAGCTCTCAAGCCAAGTAGATATTCTTATGCGGATATTAAGAGAATTACAAATCATTTCAAGCACAGGATCGGTGAAGGAGCCTATGGAACTGTTTTCAAAGGAAAACTTTCTTCGGAAGTCTTTGTTGCTGTAAAAGTCCTTAACAATTCAAGGGGGGATGGAGAAGAGTTCATAAATGAAGTGGGAACAATGGGTCGTATCCACCATGTCAATGTGGTTCGCTTGGTTGGCTTCTGCGCTGATGGATTTAGACGCGCTCTGGTCTACGAGTTCTCGCCCAATGGCGCACTACATGAATTCATTTCCTCAGCAGATAATAAGAACGGTTTTCTTGGTTGGAATAAGTATCTAGATATTTCTATAGGAATAGCAAAAGGAATTGAATATCTACACCAAGGATGCGATCAACGAATTCTCCATTTCGACATCAAACCCCACAATGTTTTGCTTGACCATAACTTGACTCCAAAAATTTCTGATTTTGGTTTGTCAAAGTTATGTGCCAAGGATCAAAGTATAGTGTCAATGACTACTGCTAGGGGGACAATTGGCTACATTGCACCGGAAGTGTTCTCCAGGAATTTCGGGAATGTATCTTATAAGTCAGATGTCTATAGTTTTGGAATGTTGTTGCTTGAGATTGTAGGGGGGAGGAACAATAAGGGTGTAGATCAGGACTCCGGTAATGACGTTTACTACCCAGAATGGATTTACAATCTTCTAGAAGGAGGAGAAGATGTTCGAGTCCGAATTGAGGAGGAAGGAGATGCTATAATTGCAAAGAAACTTGCAGTTGTAGGGCTTTGGTGCATCCAATGGCACCCGGTGGACCGTCCATCCATGAAAGTAGTTGTCCAAATGTTGGAAGGAAGAGAAAATTTAGAAATGCCTCCCAATCCTTTTGGCTCTACAGATCATACAAGAACGTTTACAAACCCCCCAACTGCTAGACGCTTCAACCCTGAGTTAGAAGCAATTGTTGAATTAGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase Pkinase_Tyr

Protein Analysis

600

Amino Acids

68.26

Weight (kDa)

5.65

Isoelectric Point (pI)

43.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 289 - 557 8.5e-44 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 289 - 556 1.9e-42 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1410
AccB1I GGYRCC 3 cut(s) 405, 617, 1629
AccB7I CCANNNNNTGG 1 cut(s) 1672
AccI GTMKAC 4 cut(s) 164, 267, 744, 1074
AccII CGCG 1 cut(s) 1065
AciI CCGC 2 cut(s) 142, 839
AclI AACGTT 1 cut(s) 1736
AclWI GGATC 2 cut(s) 884, 1326
AcsI RAATTY 8 cut(s) 21, 200, 374, 1106, 1221, 1281, 1390, 1687
AdeI CACNNNGTG 1 cut(s) 1636
AfaI GTAC 9 cut(s) 13, 192, 246, 320, 493, 532, 571, 640, 691
AfiI CCNNNNNNNGG 3 cut(s) 527, 1564, 1672
AjiI CACGTC 1 cut(s) 133
AjnI CCWGG 1 cut(s) 1385
AjuI GAANNNNNNNTTGG 2 cut(s) 814, 846
AloI GAACNNNNNNTCC 2 cut(s) 1533, 1565
AluBI AGCT 4 cut(s) 8, 422, 537, 812
AluI AGCT 4 cut(s) 8, 422, 537, 812
Alw26I GTCTC 1 cut(s) 328
AlwI GGATC 2 cut(s) 884, 1326
ApeKI GCWGC 2 cut(s) 181, 422
ApoI RAATTY 8 cut(s) 21, 200, 374, 1106, 1221, 1281, 1390, 1687
Asp700I GAANNNNTTC 2 cut(s) 916, 1548
AspLEI GCGC 3 cut(s) 1049, 1067, 1097
AspS9I GGNCC 1 cut(s) 1639
AsuC2I CCSGG 2 cut(s) 122, 1634
AsuHPI GGTGA 2 cut(s) 465, 893
AsuII TTCGAA 1 cut(s) 291
AvaII GGWCC 1 cut(s) 1639
BanI GGYRCC 3 cut(s) 405, 617, 1629
BbsI GAAGAC 1 cut(s) 727
BbvCI CCTCAGC 1 cut(s) 1117
BbvI GCAGC 2 cut(s) 193, 409
BccI CCATC 5 cut(s) 237, 529, 962, 1046, 1654
BceAI ACGGC 1 cut(s) 763
BciT130I CCWGG 1 cut(s) 1387
BciVI GTATCC 1 cut(s) 1019
BcnI CCSGG 2 cut(s) 122, 1634
BcoDI GTCTC 1 cut(s) 328
BfaI CTAG 7 cut(s) 9, 194, 252, 1160, 1347, 1532, 1758
BfmI CTRYAG 6 cut(s) 165, 427, 684, 1170, 1423, 1719
BfuI GTATCC 1 cut(s) 1019
BglII AGATCT 1 cut(s) 438
BisI GCNGC 2 cut(s) 182, 423
BlsI GCNGC 2 cut(s) 183, 424
Bme1390I CCNGG 3 cut(s) 122, 1387, 1634
Bme18I GGWCC 1 cut(s) 1639
BmgBI CACGTC 1 cut(s) 133
BmgT120I GGNCC 1 cut(s) 1639
BmiI GGNNCC 4 cut(s) 407, 619, 889, 1631
BmrFI CCNGG 3 cut(s) 122, 1387, 1634
BmsI GCATC 5 cut(s) 86, 246, 1199, 1567, 1629
BpiI GAAGAC 1 cut(s) 727
BpmI CTGGAG 1 cut(s) 1369
Bpu10I CCTNAGC 1 cut(s) 1117
Bpu14I TTCGAA 1 cut(s) 291
BpuEI CTTGAG 2 cut(s) 800, 1466
BpuMI CCSGG 2 cut(s) 122, 1634
Bsa29I ATCGAT 1 cut(s) 219
BsaJI CCNNGG 4 cut(s) 64, 120, 1204, 1314
BsaWI WCCGGW 3 cut(s) 402, 1372, 1490
BsaXI ACNNNNNCTCC 4 cut(s) 1209, 1239, 1533, 1563
Bsc4I CCNNNNNNNGG 3 cut(s) 527, 1564, 1672
Bse1I ACTGG 1 cut(s) 160
Bse3DI GCAATG 2 cut(s) 619, 1365
BseBI CCWGG 1 cut(s) 1387
BseCI ATCGAT 1 cut(s) 219
BseDI CCNNGG 4 cut(s) 64, 120, 1204, 1314
BseGI GGATG 4 cut(s) 973, 1214, 1620, 1646
BseLI CCNNNNNNNGG 3 cut(s) 527, 1564, 1672
BseMI GCAATG 2 cut(s) 619, 1365
BseMII CTCAG 6 cut(s) 30, 160, 339, 432, 1131, 1764
BseNI ACTGG 1 cut(s) 160
BseRI GAGGAG 2 cut(s) 1554, 1580
BseXI GCAGC 2 cut(s) 193, 409
BseYI CCCAGC 1 cut(s) 750
BsgI GTGCAG 1 cut(s) 76
Bsh1236I CGCG 1 cut(s) 1065
BshNI GGYRCC 3 cut(s) 405, 617, 1629
BshVI ATCGAT 1 cut(s) 219
BsiSI CCGG 5 cut(s) 122, 403, 1373, 1491, 1634
BslFI GGGAC 2 cut(s) 119, 1366
BslI CCNNNNNNNGG 3 cut(s) 527, 1564, 1672
BsmAI GTCTC 1 cut(s) 328
BsmBI CGTCTC 1 cut(s) 328
BsmFI GGGAC 2 cut(s) 119, 1366
BsmI GAATGC 1 cut(s) 56
Bsp119I TTCGAA 1 cut(s) 291
Bsp1407I TGTACA 2 cut(s) 491, 569
Bsp143I GATC 6 cut(s) 438, 876, 1213, 1318, 1480, 1723
BspACI CCGC 2 cut(s) 142, 839
BspCNI CTCAG 6 cut(s) 29, 159, 338, 431, 1130, 1765
BspDI ATCGAT 1 cut(s) 219
BspFNI CGCG 1 cut(s) 1065
BspHI TCATGA 1 cut(s) 154
BspLI GGNNCC 4 cut(s) 407, 619, 889, 1631
BspPI GGATC 2 cut(s) 884, 1326
BspT104I TTCGAA 1 cut(s) 291
BspT107I GGYRCC 3 cut(s) 405, 617, 1629
BsrDI GCAATG 2 cut(s) 619, 1365
BsrGI TGTACA 2 cut(s) 491, 569
BsrI ACTGG 1 cut(s) 160
BssECI CCNNGG 4 cut(s) 64, 120, 1204, 1314
BssMI GATC 6 cut(s) 438, 876, 1213, 1318, 1480, 1723
BssT1I CCWWGG 3 cut(s) 64, 1204, 1314
Bst2UI CCWGG 1 cut(s) 1387
Bst4CI ACNGT 8 cut(s) 169, 455, 477, 486, 530, 901, 1136, 1643
Bst6I CTCTTC 2 cut(s) 969, 1675
BstAUI TGTACA 2 cut(s) 491, 569
BstBI TTCGAA 1 cut(s) 291
BstC8I GCNNGC 1 cut(s) 91
BstDEI CTNAG 9 cut(s) 16, 146, 325, 340, 410, 418, 656, 1117, 1773
BstF5I GGATG 4 cut(s) 973, 1214, 1620, 1646
BstFNI CGCG 1 cut(s) 1065
BstHHI GCGC 3 cut(s) 1049, 1067, 1097
BstKTI GATC 6 cut(s) 441, 879, 1216, 1321, 1483, 1726
BstMAI GTCTC 1 cut(s) 328
BstMBI GATC 6 cut(s) 438, 876, 1213, 1318, 1480, 1723
BstMWI GCNNNNNNNGC 2 cut(s) 1038, 1586
BstNI CCWGG 1 cut(s) 1387
BstSCI CCNGG 3 cut(s) 120, 1385, 1632
BstSFI CTRYAG 6 cut(s) 165, 427, 684, 1170, 1423, 1719
BstUI CGCG 1 cut(s) 1065
BstV1I GCAGC 2 cut(s) 193, 409
BstV2I GAAGAC 1 cut(s) 727
BstX2I RGATCY 1 cut(s) 438
BstYI RGATCY 1 cut(s) 438
Bsu15I ATCGAT 1 cut(s) 219
BsuI GTATCC 1 cut(s) 1019
BsuTUI ATCGAT 1 cut(s) 219
BtrI CACGTC 1 cut(s) 133
BtsCI GGATG 4 cut(s) 973, 1214, 1620, 1646
Cac8I GCNNGC 1 cut(s) 91
CciI TCATGA 1 cut(s) 154
CfoI GCGC 3 cut(s) 1049, 1067, 1097
Cfr13I GGNCC 1 cut(s) 1639
ClaI ATCGAT 1 cut(s) 219
CseI GACGC 2 cut(s) 1071, 1770
Csp6I GTAC 9 cut(s) 12, 191, 245, 319, 492, 531, 570, 639, 690
CviAII CATG 7 cut(s) 52, 103, 155, 390, 1016, 1103, 1651
CviQI GTAC 9 cut(s) 12, 191, 245, 319, 492, 531, 570, 639, 690
DdeI CTNAG 9 cut(s) 16, 146, 325, 340, 410, 418, 656, 1117, 1773
DpnI GATC 6 cut(s) 440, 878, 1215, 1320, 1482, 1725
DpnII GATC 6 cut(s) 438, 876, 1213, 1318, 1480, 1723
DraIII CACNNNGTG 1 cut(s) 1636
Eam1104I CTCTTC 2 cut(s) 969, 1675
EarI CTCTTC 2 cut(s) 969, 1675
EciI GGCGGA 1 cut(s) 131
Eco130I CCWWGG 3 cut(s) 64, 1204, 1314
Eco32I GATATC 1 cut(s) 152
Eco47I GGWCC 1 cut(s) 1639
EcoRI GAATTC 2 cut(s) 1106, 1221
EcoRII CCWGG 1 cut(s) 1385
EcoRV GATATC 1 cut(s) 152
EcoT14I CCWWGG 3 cut(s) 64, 1204, 1314
ErhI CCWWGG 3 cut(s) 64, 1204, 1314
Esp3I CGTCTC 1 cut(s) 328
FaeI CATG 7 cut(s) 55, 106, 158, 393, 1019, 1106, 1654
FalI AAGNNNNNCTT 2 cut(s) 900, 932
FaqI GGGAC 2 cut(s) 119, 1366
FatI CATG 7 cut(s) 51, 102, 154, 389, 1015, 1102, 1650
FblI GTMKAC 4 cut(s) 164, 267, 744, 1074
Fnu4HI GCNGC 2 cut(s) 182, 423
FokI GGATG 4 cut(s) 980, 1221, 1607, 1633
Fsp4HI GCNGC 2 cut(s) 182, 423
FspBI CTAG 7 cut(s) 9, 194, 252, 1160, 1347, 1532, 1758
GlaI GCGC 3 cut(s) 1048, 1066, 1096
GluI GCNGC 2 cut(s) 182, 423
GsaI CCCAGC 1 cut(s) 754
GsuI CTGGAG 1 cut(s) 1369
HapII CCGG 5 cut(s) 122, 403, 1373, 1491, 1634
HgaI GACGC 2 cut(s) 1071, 1770
HhaI GCGC 3 cut(s) 1049, 1067, 1097
Hin1II CATG 7 cut(s) 55, 106, 158, 393, 1019, 1106, 1654
Hin6I GCGC 3 cut(s) 1047, 1065, 1095
HinP1I GCGC 3 cut(s) 1047, 1065, 1095
HincII GTYRAC 2 cut(s) 268, 558
HindII GTYRAC 2 cut(s) 268, 558
HinfI GANTC 7 cut(s) 98, 470, 603, 709, 1273, 1487, 1554
HpaII CCGG 5 cut(s) 122, 403, 1373, 1491, 1634
HphI GGTGA 2 cut(s) 465, 893
Hpy188III TCNNGA 7 cut(s) 155, 173, 706, 1160, 1396, 1484, 1532
HpyAV CCTTC 6 cut(s) 319, 754, 878, 1529, 1565, 1670
HpyCH4III ACNGT 8 cut(s) 169, 455, 477, 486, 530, 901, 1136, 1643
HpyCH4IV ACGT 5 cut(s) 132, 321, 361, 1500, 1736
HpyCH4V TGCA 5 cut(s) 93, 1370, 1589, 1601, 1620
HpyF10VI GCNNNNNNNGC 2 cut(s) 1038, 1586
HpyF3I CTNAG 9 cut(s) 16, 146, 325, 340, 410, 418, 656, 1117, 1773
HpySE526I ACGT 5 cut(s) 132, 321, 361, 1500, 1736
Hsp92II CATG 7 cut(s) 55, 106, 158, 393, 1019, 1106, 1654
HspAI GCGC 3 cut(s) 1047, 1065, 1095
Kzo9I GATC 6 cut(s) 438, 876, 1213, 1318, 1480, 1723
LmnI GCTCC 1 cut(s) 887
Lsp1109I GCAGC 2 cut(s) 193, 409
LweI GCATC 5 cut(s) 86, 246, 1199, 1567, 1629
MaeI CTAG 7 cut(s) 9, 194, 252, 1160, 1347, 1532, 1758
MaeII ACGT 5 cut(s) 132, 321, 361, 1500, 1736
MaeIII GTNAC 5 cut(s) 357, 413, 471, 714, 777
MalI GATC 6 cut(s) 440, 878, 1215, 1320, 1482, 1725
MboI GATC 6 cut(s) 438, 876, 1213, 1318, 1480, 1723
MboII GAAGA 7 cut(s) 52, 727, 912, 986, 1520, 1556, 1692
MfeI CAATTG 2 cut(s) 1356, 1785
MflI RGATCY 1 cut(s) 438
MlyI GAGTC 4 cut(s) 479, 1267, 1481, 1563
MmeI TCCRAC 2 cut(s) 1127, 1653
MroXI GAANNNNTTC 2 cut(s) 916, 1548
MseI TTAA 3 cut(s) 435, 846, 951
MslI CAYNNNNRTG 1 cut(s) 1020
MspA1I CMGCKG 1 cut(s) 422
MspI CCGG 5 cut(s) 122, 403, 1373, 1491, 1634
MspR9I CCNGG 3 cut(s) 122, 1387, 1634
MunI CAATTG 2 cut(s) 1356, 1785
Mva1269I GAATGC 1 cut(s) 56
MvaI CCWGG 1 cut(s) 1387
MvnI CGCG 1 cut(s) 1065
MwoI GCNNNNNNNGC 2 cut(s) 1038, 1586
NciI CCSGG 2 cut(s) 122, 1634
NdeII GATC 6 cut(s) 438, 876, 1213, 1318, 1480, 1723
NlaIII CATG 7 cut(s) 55, 106, 158, 393, 1019, 1106, 1654
NlaIV GGNNCC 4 cut(s) 407, 619, 889, 1631
NmuCI GTSAC 2 cut(s) 413, 471
NspV TTCGAA 1 cut(s) 291
PagI TCATGA 1 cut(s) 154
PctI GAATGC 1 cut(s) 56
PdmI GAANNNNTTC 2 cut(s) 916, 1548
PfeI GAWTC 3 cut(s) 98, 603, 709
PflMI CCANNNNNTGG 1 cut(s) 1672
PfoI TCCNGGA 1 cut(s) 1385
PkrI GCNGC 2 cut(s) 183, 424
PleI GAGTC 4 cut(s) 478, 1267, 1481, 1562
PpsI GAGTC 4 cut(s) 478, 1267, 1481, 1562
PsiI TTATAA 1 cut(s) 1410
Psp1406I AACGTT 1 cut(s) 1736
Psp6I CCWGG 1 cut(s) 1385
PspFI CCCAGC 1 cut(s) 750
PspGI CCWGG 1 cut(s) 1385
PspN4I GGNNCC 4 cut(s) 407, 619, 889, 1631
PspPI GGNCC 1 cut(s) 1639
PsuI RGATCY 1 cut(s) 438
PvuII CAGCTG 1 cut(s) 422
RsaI GTAC 9 cut(s) 13, 192, 246, 320, 493, 532, 571, 640, 691
RsaNI GTAC 9 cut(s) 12, 191, 245, 319, 492, 531, 570, 639, 690
RseI CAYNNNNRTG 1 cut(s) 1020
SalI GTCGAC 1 cut(s) 266
SaqAI TTAA 3 cut(s) 435, 846, 951
SatI GCNGC 2 cut(s) 182, 423
Sau3AI GATC 6 cut(s) 438, 876, 1213, 1318, 1480, 1723
Sau96I GGNCC 1 cut(s) 1639
SchI GAGTC 4 cut(s) 479, 1267, 1481, 1563
ScrFI CCNGG 3 cut(s) 122, 1387, 1634
SfaNI GCATC 5 cut(s) 86, 246, 1199, 1567, 1629
SfcI CTRYAG 6 cut(s) 165, 427, 684, 1170, 1423, 1719
SfuI TTCGAA 1 cut(s) 291
SinI GGWCC 1 cut(s) 1639
SmiMI CAYNNNNRTG 1 cut(s) 1020
SmlI CTYRAG 2 cut(s) 815, 1445
SmoI CTYRAG 2 cut(s) 815, 1445
SsiI CCGC 2 cut(s) 142, 839
SspMI CTAG 7 cut(s) 9, 194, 252, 1160, 1347, 1532, 1758
StyD4I CCNGG 3 cut(s) 120, 1385, 1632
StyI CCWWGG 3 cut(s) 64, 1204, 1314
TaaI ACNGT 8 cut(s) 169, 455, 477, 486, 530, 901, 1136, 1643
TaiI ACGT 5 cut(s) 135, 324, 364, 1503, 1739
TaqI TCGA 8 cut(s) 219, 240, 267, 291, 465, 678, 1233, 1552
TaqII GACCGA 1 cut(s) 721
TatI WGTACW 5 cut(s) 190, 244, 491, 569, 638
TfiI GAWTC 3 cut(s) 98, 603, 709
Tru1I TTAA 3 cut(s) 435, 846, 951
Tru9I TTAA 3 cut(s) 435, 846, 951
TseFI GTSAC 2 cut(s) 413, 471
TseI GCWGC 2 cut(s) 181, 422
Tsp45I GTSAC 2 cut(s) 413, 471
TspDTI ATGAA 9 cut(s) 40, 347, 469, 773, 970, 1002, 1099, 1119, 1667
Van91I CCANNNNNTGG 1 cut(s) 1672
VpaK11BI GGWCC 1 cut(s) 1639
XapI RAATTY 8 cut(s) 21, 200, 374, 1106, 1221, 1281, 1390, 1687
XbaI TCTAGA 2 cut(s) 1159, 1531
XmiI GTMKAC 4 cut(s) 164, 267, 744, 1074
XmnI GAANNNNTTC 2 cut(s) 916, 1548
XspI CTAG 7 cut(s) 9, 194, 252, 1160, 1347, 1532, 1758
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.