MD02G1247200.v1.1

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0000107
Physical Location & Seq
Reverse (-)
29743244 .. 29745249
2006 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1247200.v1.1.491

Sequence Viewer

Length: 1800 bp
ATGCAGAAATGGTTCATCTCTTCCTTTTGCATATTGTTACTGGTTTTTTTCAAACTAGCTGGAGCAAGCCAATATATGTGCGCAGAATCCAAGTGTGCCGAGGATCAAGGCCCGGCTATCCATTTCCCATTGCGCCGCAGTGGCACACATCATTGTGGAAATCCTGGGCTTGAATGCAACCAAACCTATGAGCAGCCGATAGTAGTAAAATTTTTTTTCAAACACATAAATTACAAGAGTCAGGAAATCCAAGTCTATCCCTCAAGTAATTGCCTGCTGCTAAAGCCTGTTGAAATCCCAAACATGCCACCCTCTCCCTTCTCTGTGTCAATTGCTTACATCAATAACGTTACCTTATTCAGTTGTGCTACTCCTATTATGTATGAGTATCAAGTCCCCTGCCTCGGCGACCCTGGCAGCAGAATTTATGCCGTTGATTCTGACACGAGTTTAAAATTTCTCATCCCGGATCTACGATCTTGTTCAAAGATGTATGATGTTTTATCAGTTCCATTTGGCAAATGGGTGGGTAATGGCGATGTTCTTCAATTCAATTGGTCAAAACCAAATTGTACAGAATGTGAAGCAGAGGGAAAGAGGTGTAGATGGAAGAAAAATGGCGCCAACGGTGAAATTGAATGTCAACACGTGAGGAAACAAAGTAACACATGGAAATTAGTGGTTACAGGTGGAATCCTGGGTTCTTTGCTTCTTGTTCTACTGATGATTGCAGCATATCGGGTATATAGCGCTGATAGGAAGGAAAAAGAGAGTCGATTAAGAATTGAAAGATTCTTGGAGGATTACAAGGCACTCAAACCAAGCAGGTACTTGTACGCGGATATTAGGAGGATTACAAATCAATTCAAGGACAAGTTGGGCCAAGGAGCCTATGGAACTGTCTTCAAAGGAAAGCTCTCTTCCGAGTTCTTTATTGCTGTCAAACTCCTCAACAGTTCTAAGGGAGATGGGGAAGAGTTCGTAAATGAAGTGCGAACGATGGGCCAAATCCACCACGTCAACGTGGCTCGCTTGGTTGGATTTTGTGCTGATGGATATGTACGAGCTCTTGTTTACGAATTCTTCCCCAATGGTTCCTTGCAGGATTTCATTTCATCTGCAGATAGTAAGAATTCTTTTCTTGGTTGGGATAAGTTGCAAGATATTGCACTAGGAATAGCCAAAGGAATTGACTATCTTCATCAAGGATGCGATCAACGAATCCTGCATTTCGATATCAAGCCCCATAATATTTTGCTAGACCAAAACTTCACTCCAAAAATTTCTGATTTTGGTTTGGCCAAGTTATGTTCCAAGGATCAAAGCATGGTGTCTATGACTACAGCTAGGGGGACCATGGGGTACATTGCACCCGAAGTGTTCTCCAGGAATTTCGGAAATGTGTCTTACAAGGCAGACGTCTATAGCTTTGGAATGCTGCTGATCGAGATGGTAGGAGGAAGGAAGAATATTGGTTCAACCATAGAGAACACCACAAATGAAATTTACTATCCACAGTGGATTTATAATCTTCTAGAGGAAGGGGATGACCTACGAATCCATATTGGGGAAGAAGGAGATGGTAAAATTCCAAAGAAACTTGCAATTGTAGGGCTATGGTGTATCCAATGGCACCCGGTGGATCGTCTTGCCATGAAAATAGCGGTTCAGATGTTAGAAGGAGAAGGAGAAAGCTTGACCATGCCGCCTAATCCCTTTGTGCCTACAGGTCCTACAACTAGAAATGGGAGCATTCCAGCAAGGCGCCTAGAGTTGGAAGCAATTGCTGAACTAGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase Pkinase_Tyr

Protein Analysis

600

Amino Acids

67.45

Weight (kDa)

7.78

Isoelectric Point (pI)

41.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 288 - 490 5.8e-42 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 289 - 557 1.2e-44 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1527
AatII GACGTC 1 cut(s) 1422
Acc16I TGCGCA 1 cut(s) 82
Acc36I ACCTGC 1 cut(s) 816
AccB1I GGYRCC 3 cut(s) 620, 1632, 1764
AccII CGCG 1 cut(s) 839
AciI CCGC 4 cut(s) 136, 839, 1664, 1706
AclI AACGTT 1 cut(s) 348
AclWI GGATC 4 cut(s) 111, 477, 1326, 1650
AcoI YGGCCR 1 cut(s) 1299
AcsI RAATTY 9 cut(s) 209, 423, 455, 1079, 1132, 1281, 1390, 1503, 1587
AcvI CACGTG 1 cut(s) 649
AcyI GRCGYC 3 cut(s) 621, 1419, 1765
AdeI CACNNNGTG 1 cut(s) 1639
AfaI GTAC 5 cut(s) 574, 830, 836, 1062, 1364
AfeI AGCGCT 1 cut(s) 751
AfiI CCNNNNNNNGG 3 cut(s) 404, 1567, 1774
AflIII ACRYGT 1 cut(s) 646
AjiI CACGTC 1 cut(s) 1018
AjnI CCWGG 4 cut(s) 163, 412, 696, 1385
AluBI AGCT 6 cut(s) 59, 916, 1067, 1346, 1428, 1695
AluI AGCT 6 cut(s) 59, 916, 1067, 1346, 1428, 1695
Alw21I GWGCWC 1 cut(s) 1069
AlwI GGATC 4 cut(s) 111, 477, 1326, 1650
Aor51HI AGCGCT 1 cut(s) 751
AoxI GGCC 4 cut(s) 109, 880, 1003, 1299
ApeKI GCWGC 5 cut(s) 193, 277, 417, 731, 1438
ApoI RAATTY 9 cut(s) 209, 423, 455, 1079, 1132, 1281, 1390, 1503, 1587
Asp700I GAANNNNTTC 1 cut(s) 11
AspLEI GCGC 5 cut(s) 83, 135, 623, 752, 1767
AspS9I GGNCC 5 cut(s) 110, 880, 1003, 1353, 1730
AsuC2I CCSGG 3 cut(s) 113, 467, 1637
AsuHPI GGTGA 1 cut(s) 641
AvaII GGWCC 2 cut(s) 1353, 1730
BalI TGGCCA 1 cut(s) 1301
BanI GGYRCC 3 cut(s) 620, 1632, 1764
BanII GRGCYC 1 cut(s) 1069
BauI CACGAG 1 cut(s) 445
BbrPI CACGTG 1 cut(s) 649
BbsI GAAGAC 1 cut(s) 895
Bbv12I GWGCWC 1 cut(s) 1069
BbvI GCAGC 5 cut(s) 205, 264, 429, 743, 1425
BccI CCATC 6 cut(s) 600, 962, 994, 1046, 1444, 1574
BceAI ACGGC 1 cut(s) 416
BciT130I CCWGG 4 cut(s) 165, 414, 698, 1387
BciVI GTATCC 1 cut(s) 1634
BcnI CCSGG 3 cut(s) 113, 467, 1637
BfaI CTAG 8 cut(s) 56, 1172, 1259, 1347, 1535, 1740, 1769, 1793
BfmI CTRYAG 4 cut(s) 1119, 1341, 1423, 1725
BfoI RGCGCY 3 cut(s) 624, 753, 1768
BfuAI ACCTGC 1 cut(s) 816
BfuI GTATCC 1 cut(s) 1634
BglI GCCNNNNNGGC 1 cut(s) 141
BisI GCNGC 7 cut(s) 136, 194, 278, 418, 732, 1439, 1706
BlsI GCNGC 7 cut(s) 137, 195, 279, 419, 733, 1440, 1707
Bme1390I CCNGG 7 cut(s) 113, 165, 414, 467, 698, 1387, 1637
Bme18I GGWCC 2 cut(s) 1353, 1730
BmgBI CACGTC 1 cut(s) 1018
BmgT120I GGNCC 5 cut(s) 110, 880, 1003, 1353, 1730
BmiI GGNNCC 6 cut(s) 622, 889, 1096, 1354, 1634, 1766
BmrFI CCNGG 7 cut(s) 113, 165, 414, 467, 698, 1387, 1637
BmsI GCATC 1 cut(s) 1199
BpiI GAAGAC 1 cut(s) 895
BpmI CTGGAG 2 cut(s) 81, 1369
BpuEI CTTGAG 1 cut(s) 247
BpuMI CCSGG 3 cut(s) 113, 467, 1637
BsaAI YACGTR 1 cut(s) 649
BsaHI GRCGYC 3 cut(s) 621, 1419, 1765
BsaJI CCNNGG 8 cut(s) 99, 164, 403, 412, 697, 883, 1314, 1356
Bsc4I CCNNNNNNNGG 3 cut(s) 404, 1567, 1774
Bse1I ACTGG 1 cut(s) 45
Bse3DI GCAATG 2 cut(s) 128, 1365
BseBI CCWGG 4 cut(s) 165, 414, 698, 1387
BseDI CCNNGG 8 cut(s) 99, 164, 403, 412, 697, 883, 1314, 1356
BseGI GGATG 3 cut(s) 462, 1214, 1552
BseLI CCNNNNNNNGG 3 cut(s) 404, 1567, 1774
BseMI GCAATG 2 cut(s) 128, 1365
BseNI ACTGG 1 cut(s) 45
BseRI GAGGAG 1 cut(s) 938
BseXI GCAGC 5 cut(s) 205, 264, 429, 743, 1425
Bsh1236I CGCG 1 cut(s) 839
BshFI GGCC 4 cut(s) 111, 882, 1005, 1301
BshNI GGYRCC 3 cut(s) 620, 1632, 1764
BsiHKAI GWGCWC 1 cut(s) 1069
BsiSI CCGG 3 cut(s) 113, 467, 1637
BslFI GGGAC 2 cut(s) 380, 1366
BslI CCNNNNNNNGG 3 cut(s) 404, 1567, 1774
BsmFI GGGAC 2 cut(s) 380, 1366
BsmI GAATGC 3 cut(s) 179, 1440, 1752
BsnI GGCC 4 cut(s) 111, 882, 1005, 1301
Bsp1286I GDGCHC 1 cut(s) 1069
Bsp1407I TGTACA 1 cut(s) 572
Bsp143I GATC 7 cut(s) 103, 469, 476, 1213, 1318, 1443, 1642
Bsp19I CCATGG 1 cut(s) 1356
BspACI CCGC 4 cut(s) 136, 839, 1664, 1706
BspANI GGCC 4 cut(s) 111, 882, 1005, 1301
BspFNI CGCG 1 cut(s) 839
BspLI GGNNCC 6 cut(s) 622, 889, 1096, 1354, 1634, 1766
BspMAI CTGCAG 1 cut(s) 1123
BspMI ACCTGC 1 cut(s) 816
BspPI GGATC 4 cut(s) 111, 477, 1326, 1650
BspT107I GGYRCC 3 cut(s) 620, 1632, 1764
BsrDI GCAATG 2 cut(s) 128, 1365
BsrGI TGTACA 1 cut(s) 572
BsrI ACTGG 1 cut(s) 45
BssECI CCNNGG 8 cut(s) 99, 164, 403, 412, 697, 883, 1314, 1356
BssMI GATC 7 cut(s) 103, 469, 476, 1213, 1318, 1443, 1642
BssNI GRCGYC 3 cut(s) 621, 1419, 1765
BssSI CACGAG 1 cut(s) 445
BssT1I CCWWGG 3 cut(s) 883, 1314, 1356
Bst2BI CACGAG 1 cut(s) 445
Bst2UI CCWGG 4 cut(s) 165, 414, 698, 1387
Bst4CI ACNGT 4 cut(s) 629, 901, 956, 1518
Bst6I CTCTTC 3 cut(s) 25, 925, 969
BstACI GRCGYC 3 cut(s) 621, 1419, 1765
BstAUI TGTACA 1 cut(s) 572
BstBAI YACGTR 1 cut(s) 649
BstC8I GCNNGC 3 cut(s) 67, 275, 1030
BstDEI CTNAG 1 cut(s) 960
BstDSI CCRYGG 1 cut(s) 1356
BstF5I GGATG 3 cut(s) 462, 1214, 1552
BstFNI CGCG 1 cut(s) 839
BstH2I RGCGCY 3 cut(s) 624, 753, 1768
BstHHI GCGC 5 cut(s) 83, 135, 623, 752, 1767
BstKTI GATC 7 cut(s) 106, 472, 479, 1216, 1321, 1446, 1645
BstMBI GATC 7 cut(s) 103, 469, 476, 1213, 1318, 1443, 1642
BstMWI GCNNNNNNNGC 3 cut(s) 141, 283, 414
BstNI CCWGG 4 cut(s) 165, 414, 698, 1387
BstNSI RCATGY 1 cut(s) 307
BstSCI CCNGG 7 cut(s) 111, 163, 412, 465, 696, 1385, 1635
BstSFI CTRYAG 4 cut(s) 1119, 1341, 1423, 1725
BstUI CGCG 1 cut(s) 839
BstV1I GCAGC 5 cut(s) 205, 264, 429, 743, 1425
BstV2I GAAGAC 1 cut(s) 895
BstX2I RGATCY 1 cut(s) 469
BstYI RGATCY 1 cut(s) 469
BsuI GTATCC 1 cut(s) 1634
BsuRI GGCC 4 cut(s) 111, 882, 1005, 1301
BtgI CCRYGG 1 cut(s) 1356
BtgZI GCGATG 1 cut(s) 552
BtrI CACGTC 1 cut(s) 1018
BtsCI GGATG 3 cut(s) 462, 1214, 1552
BtsI GCAGTG 1 cut(s) 145
BtsIMutI CAGTG 2 cut(s) 145, 1523
BveI ACCTGC 1 cut(s) 816
Cac8I GCNNGC 3 cut(s) 67, 275, 1030
CfoI GCGC 5 cut(s) 83, 135, 623, 752, 1767
Cfr13I GGNCC 5 cut(s) 110, 880, 1003, 1353, 1730
Csp6I GTAC 5 cut(s) 573, 829, 835, 1061, 1363
CviAII CATG 6 cut(s) 304, 669, 1327, 1357, 1654, 1702
CviQI GTAC 5 cut(s) 573, 829, 835, 1061, 1363
DdeI CTNAG 1 cut(s) 960
DinI GGCGCC 2 cut(s) 622, 1766
DpnI GATC 7 cut(s) 105, 471, 478, 1215, 1320, 1445, 1644
DpnII GATC 7 cut(s) 103, 469, 476, 1213, 1318, 1443, 1642
DraI TTTAAA 1 cut(s) 453
DraIII CACNNNGTG 1 cut(s) 1639
EaeI YGGCCR 1 cut(s) 1299
Eam1104I CTCTTC 3 cut(s) 25, 925, 969
EarI CTCTTC 3 cut(s) 25, 925, 969
Ecl136II GAGCTC 1 cut(s) 1067
Eco130I CCWWGG 3 cut(s) 883, 1314, 1356
Eco24I GRGCYC 1 cut(s) 1069
Eco32I GATATC 1 cut(s) 1237
Eco47I GGWCC 2 cut(s) 1353, 1730
Eco47III AGCGCT 1 cut(s) 751
Eco53kI GAGCTC 1 cut(s) 1067
Eco72I CACGTG 1 cut(s) 649
EcoICRI GAGCTC 1 cut(s) 1067
EcoO109I RGGNCCY 1 cut(s) 1730
EcoRI GAATTC 2 cut(s) 1079, 1132
EcoRII CCWGG 4 cut(s) 163, 412, 696, 1385
EcoRV GATATC 1 cut(s) 1237
EcoT14I CCWWGG 3 cut(s) 883, 1314, 1356
EcoT38I GRGCYC 1 cut(s) 1069
EgeI GGCGCC 2 cut(s) 622, 1766
EheI GGCGCC 2 cut(s) 622, 1766
ErhI CCWWGG 3 cut(s) 883, 1314, 1356
FaeI CATG 6 cut(s) 307, 672, 1330, 1360, 1657, 1705
FaqI GGGAC 2 cut(s) 380, 1366
FatI CATG 6 cut(s) 303, 668, 1326, 1356, 1653, 1701
Fnu4HI GCNGC 7 cut(s) 136, 194, 278, 418, 732, 1439, 1706
FokI GGATG 3 cut(s) 449, 1221, 1559
FriOI GRGCYC 1 cut(s) 1069
Fsp4HI GCNGC 7 cut(s) 136, 194, 278, 418, 732, 1439, 1706
FspBI CTAG 8 cut(s) 56, 1172, 1259, 1347, 1535, 1740, 1769, 1793
FspI TGCGCA 1 cut(s) 82
GlaI GCGC 5 cut(s) 82, 134, 622, 751, 1766
GluI GCNGC 7 cut(s) 136, 194, 278, 418, 732, 1439, 1706
GsuI CTGGAG 2 cut(s) 81, 1369
HaeII RGCGCY 3 cut(s) 624, 753, 1768
HaeIII GGCC 4 cut(s) 111, 882, 1005, 1301
HapII CCGG 3 cut(s) 113, 467, 1637
HhaI GCGC 5 cut(s) 83, 135, 623, 752, 1767
Hin1I GRCGYC 3 cut(s) 621, 1419, 1765
Hin1II CATG 6 cut(s) 307, 672, 1330, 1360, 1657, 1705
Hin6I GCGC 5 cut(s) 81, 133, 621, 750, 1765
HinP1I GCGC 5 cut(s) 81, 133, 621, 750, 1765
HincII GTYRAC 2 cut(s) 644, 1021
HindII GTYRAC 2 cut(s) 644, 1021
HindIII AAGCTT 1 cut(s) 1693
HinfI GANTC 8 cut(s) 86, 238, 437, 693, 772, 792, 1221, 1557
HpaII CCGG 3 cut(s) 113, 467, 1637
HphI GGTGA 1 cut(s) 641
Hpy166II GTNNAC 3 cut(s) 644, 1021, 1075
Hpy188I TCNGA 5 cut(s) 442, 925, 1288, 1397, 1671
Hpy188III TCNNGA 3 cut(s) 242, 1447, 1535
Hpy8I GTNNAC 3 cut(s) 644, 1021, 1075
HpyAV CCTTC 7 cut(s) 328, 754, 1455, 1535, 1568, 1673, 1679
HpyCH4III ACNGT 4 cut(s) 629, 901, 956, 1518
HpyCH4IV ACGT 5 cut(s) 348, 648, 1017, 1023, 1419
HpyF10VI GCNNNNNNNGC 3 cut(s) 141, 283, 414
HpyF3I CTNAG 1 cut(s) 960
HpySE526I ACGT 5 cut(s) 348, 648, 1017, 1023, 1419
Hsp92I GRCGYC 3 cut(s) 621, 1419, 1765
Hsp92II CATG 6 cut(s) 307, 672, 1330, 1360, 1657, 1705
HspAI GCGC 5 cut(s) 81, 133, 621, 750, 1765
KasI GGCGCC 2 cut(s) 620, 1764
Kzo9I GATC 7 cut(s) 103, 469, 476, 1213, 1318, 1443, 1642
LmnI GCTCC 3 cut(s) 62, 887, 1749
Lsp1109I GCAGC 5 cut(s) 205, 264, 429, 743, 1425
LweI GCATC 1 cut(s) 1199
MaeI CTAG 8 cut(s) 56, 1172, 1259, 1347, 1535, 1740, 1769, 1793
MaeII ACGT 5 cut(s) 348, 648, 1017, 1023, 1419
MaeIII GTNAC 4 cut(s) 36, 349, 662, 682
MalI GATC 7 cut(s) 105, 471, 478, 1215, 1320, 1445, 1644
MboI GATC 7 cut(s) 103, 469, 476, 1213, 1318, 1443, 1642
MfeI CAATTG 4 cut(s) 330, 553, 1605, 1782
MflI RGATCY 1 cut(s) 469
MhlI GDGCHC 1 cut(s) 1069
MlsI TGGCCA 1 cut(s) 1301
MluNI TGGCCA 1 cut(s) 1301
Mly113I GGCGCC 2 cut(s) 621, 1765
MlyI GAGTC 2 cut(s) 247, 781
MmeI TCCRAC 2 cut(s) 1018, 1755
Mox20I TGGCCA 1 cut(s) 1301
MroXI GAANNNNTTC 1 cut(s) 11
MscI TGGCCA 1 cut(s) 1301
MseI TTAA 2 cut(s) 452, 779
MslI CAYNNNNRTG 1 cut(s) 153
Msp20I TGGCCA 1 cut(s) 1301
MspI CCGG 3 cut(s) 113, 467, 1637
MspR9I CCNGG 7 cut(s) 113, 165, 414, 467, 698, 1387, 1637
MunI CAATTG 4 cut(s) 330, 553, 1605, 1782
Mva1269I GAATGC 3 cut(s) 179, 1440, 1752
MvaI CCWGG 4 cut(s) 165, 414, 698, 1387
MvnI CGCG 1 cut(s) 839
MwoI GCNNNNNNNGC 3 cut(s) 141, 283, 414
NarI GGCGCC 2 cut(s) 621, 1765
NciI CCSGG 3 cut(s) 113, 467, 1637
NcoI CCATGG 1 cut(s) 1356
NdeII GATC 7 cut(s) 103, 469, 476, 1213, 1318, 1443, 1642
NlaIII CATG 6 cut(s) 307, 672, 1330, 1360, 1657, 1705
NlaIV GGNNCC 6 cut(s) 622, 889, 1096, 1354, 1634, 1766
NmeAIII GCCGAG 2 cut(s) 124, 384
NsbI TGCGCA 1 cut(s) 82
NspI RCATGY 1 cut(s) 307
PctI GAATGC 3 cut(s) 179, 1440, 1752
PdmI GAANNNNTTC 1 cut(s) 11
PfeI GAWTC 6 cut(s) 86, 437, 693, 792, 1221, 1557
PfoI TCCNGGA 2 cut(s) 465, 1385
PkrI GCNGC 7 cut(s) 137, 195, 279, 419, 733, 1440, 1707
PleI GAGTC 2 cut(s) 246, 780
PluTI GGCGCC 2 cut(s) 624, 1768
PmaCI CACGTG 1 cut(s) 649
PmlI CACGTG 1 cut(s) 649
PpsI GAGTC 2 cut(s) 246, 780
Ppu21I YACGTR 1 cut(s) 649
PpuMI RGGWCCY 1 cut(s) 1730
PsiI TTATAA 1 cut(s) 1527
Psp124BI GAGCTC 1 cut(s) 1069
Psp1406I AACGTT 1 cut(s) 348
Psp5II RGGWCCY 1 cut(s) 1730
Psp6I CCWGG 4 cut(s) 163, 412, 696, 1385
PspCI CACGTG 1 cut(s) 649
PspGI CCWGG 4 cut(s) 163, 412, 696, 1385
PspN4I GGNNCC 6 cut(s) 622, 889, 1096, 1354, 1634, 1766
PspPI GGNCC 5 cut(s) 110, 880, 1003, 1353, 1730
PspPPI RGGWCCY 1 cut(s) 1730
PstI CTGCAG 1 cut(s) 1123
PsuI RGATCY 1 cut(s) 469
RsaI GTAC 5 cut(s) 574, 830, 836, 1062, 1364
RsaNI GTAC 5 cut(s) 573, 829, 835, 1061, 1363
RseI CAYNNNNRTG 1 cut(s) 153
SacI GAGCTC 1 cut(s) 1069
SaqAI TTAA 2 cut(s) 452, 779
SatI GCNGC 7 cut(s) 136, 194, 278, 418, 732, 1439, 1706
Sau3AI GATC 7 cut(s) 103, 469, 476, 1213, 1318, 1443, 1642
Sau96I GGNCC 5 cut(s) 110, 880, 1003, 1353, 1730
SchI GAGTC 2 cut(s) 247, 781
ScrFI CCNGG 7 cut(s) 113, 165, 414, 467, 698, 1387, 1637
SduI GDGCHC 1 cut(s) 1069
SfaNI GCATC 1 cut(s) 1199
SfcI CTRYAG 4 cut(s) 1119, 1341, 1423, 1725
SfoI GGCGCC 2 cut(s) 622, 1766
SinI GGWCC 2 cut(s) 1353, 1730
SmiMI CAYNNNNRTG 1 cut(s) 153
SmlI CTYRAG 1 cut(s) 262
SmoI CTYRAG 1 cut(s) 262
SsiI CCGC 4 cut(s) 136, 839, 1664, 1706
SspDI GGCGCC 2 cut(s) 620, 1764
SspI AATATT 2 cut(s) 1252, 1471
SspMI CTAG 8 cut(s) 56, 1172, 1259, 1347, 1535, 1740, 1769, 1793
SstI GAGCTC 1 cut(s) 1069
StyD4I CCNGG 7 cut(s) 111, 163, 412, 465, 696, 1385, 1635
StyI CCWWGG 3 cut(s) 883, 1314, 1356
TaaI ACNGT 4 cut(s) 629, 901, 956, 1518
TaiI ACGT 5 cut(s) 351, 651, 1020, 1026, 1422
TaqI TCGA 3 cut(s) 775, 1233, 1446
TatI WGTACW 1 cut(s) 572
TauI GCSGC 2 cut(s) 138, 1708
TfiI GAWTC 6 cut(s) 86, 437, 693, 792, 1221, 1557
Tru1I TTAA 2 cut(s) 452, 779
Tru9I TTAA 2 cut(s) 452, 779
TscAI CASTG 2 cut(s) 145, 1523
TseI GCWGC 5 cut(s) 193, 277, 417, 731, 1438
TspDTI ATGAA 7 cut(s) 4, 1002, 1099, 1104, 1190, 1515, 1670
TspRI CASTG 2 cut(s) 145, 1523
VpaK11BI GGWCC 2 cut(s) 1353, 1730
XapI RAATTY 9 cut(s) 209, 423, 455, 1079, 1132, 1281, 1390, 1503, 1587
XbaI TCTAGA 1 cut(s) 1534
XceI RCATGY 1 cut(s) 307
XcmI CCANNNNNNNNNTGG 2 cut(s) 519, 890
XmnI GAANNNNTTC 1 cut(s) 11
XspI CTAG 8 cut(s) 56, 1172, 1259, 1347, 1535, 1740, 1769, 1793
ZraI GACGTC 1 cut(s) 1420
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.