Rmu_sc0002955.1_g000028

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002955.1
OG0000107
Physical Location & Seq
Forward (+)
155088 .. 159469
4382 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002955.1_g000028.1.cds

Sequence Viewer

Length: 2286 bp
atgcagcgaactctcgtctctttcttttgcttcgtcttcctggctttctcatccaaagtcctttgtggaaaccaaagcacctgcagagagttgaagtgtgggaaacatggcccagctatcagattcccttttagcctcaaaggtagccacccagaaaattgtgggtatcctgggtttcttgtatcctgcactgaaaacaaggaaaccattcttgagctgccaatcccagttaaattcgcaatcaaaaccatagactataagaatcagaaaatccagctatatgacccagaaaattgcttgctggtgaagctattgaaagtccacaacatgtcaatctctcccttccactactcagaataccaaatggatgatattttcttgttcaattgttcctcagctgaaagggaatcgacataccgtatgcaccatgtcccctgcttgagtggccatgtctaccaaatttcttggcctgggtattcagttggtaattattcctcagttgataattttcccgttctgtcttgtacgaagatctctaattattcctcagttccatacatggcgtatgaccctcaaaatctttctttggactggacggagccaaattgcagaccatgcgaagcatacggcaacaaatgtggatttaagaacaatgacaccaaaagtaccgaaattgaatgccttcatagggaaggaggttcacaaaaacagttagtagcgacaggtgcatccctgggttcatttgtactcgtactactggtcgttgcagtttatcgtgtctacagttctgacaggaaagaaaaagagaatcaattaaaacttgaagtatttttagaggattacagagcactcaaaccaagcagatattcttatgctgatattaagaggattacaaatcaattcaaggaaaaattaggccaaggagcctatgggacagtttttaagggaaaactttctgctgaatgttttgttgcggtgaaagtcctcaatagtactaaggggaatggggaagagtttgtaaatgaagtaggaacaatgggacatatccaccatgtcaatgtggttcgattggttggattctgtgcggatggatttagacgagctcttgtttatgacttcttacctaatggttcgctacaagatttcatttcatcagcagacaataacaattctttacttggttggggtaagttgcaagatatttctcttggaatagcaaaaggaattgaatatctgcaccaaggatgcaatcaacggatcctacattttgatatcaaaccccataatgtcttgctagaccataacttcaacgcaaagatttctgattttggtttggccaagttatgttccaaggatcaaagtatcgtgtcaatgactaccgccaggggaactatcgggtacattgcacctgaagtgttctccaggaacttcggaaatgtgtcctataagtcagatgtctatagctatggaatggtactgcttgagattgtaggggggagaaagaacattggttcaaccatagagaacaccaatgaagtttactacccagaatggatctataatcttctagaagaaaaagacgacctacctatcaatgtaggggaagaaggagatgctaaaattgcgaagagacttgcgattgttggtctctggtgcattcaatggcaccctgcagatcgtccttccatgcaaggggtggttcagatgttggaaggaggagaaaacttaaccatgcctccaaatccttttgcctctcagggtccagcaggaacagatacaagtacaccttcaagaaatttaaatctccaactagaagtaattcctgagttagaatacaatagagggagttggatcgggttaaggggccgtggagccccgaagacggcattgtcatcggcggaggcgtttcgatcgaggaacaacatcaccaccacctcaggccggagaagaaatcggtctgtttcggtgtcgggcctcagatacagtccgacgagcccgtccagatccgacgtcagtgactccggcgtggtgcctgcagtctcgtcggcgcaagtgttcaagccggtagcgaaagcaatgttaaggacggagtcgccgccgagccagaacgacatgatctacaatgaaccggagccgtcaaatctgctgactctggaggctactcgaccgagttggggactcaccgagaagaaagaacaacgtcgttacagcagcaagacgaggctgagaatgagaacaaaacgatgtcgtttgggctggagttcatgtcttttaagcaggagatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase

Protein Analysis

761

Amino Acids

85.19

Weight (kDa)

8.86

Isoelectric Point (pI)

44.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 89
AasI GACNNNNNNGTC 2 cut(s) 1888, 1996
AatII GACGTC 1 cut(s) 2013
Acc36I ACCTGC 1 cut(s) 89
AccB1I GGYRCC 2 cut(s) 1665, 2029
AccI GTMKAC 2 cut(s) 453, 780
AciI CCGC 5 cut(s) 974, 1085, 1380, 1898, 2096
AclWI GGATC 6 cut(s) 1252, 1265, 1362, 1562, 1859, 1998
AcoI YGGCCR 2 cut(s) 445, 1335
AcsI RAATTY 3 cut(s) 233, 459, 1795
AcuI CTGAAG 1 cut(s) 1431
AcyI GRCGYC 1 cut(s) 2010
AfaI GTAC 8 cut(s) 526, 667, 747, 753, 994, 1400, 1476, 1783
AfiI CCNNNNNNNGG 5 cut(s) 688, 1692, 1882, 1941, 2174
AflIII ACRYGT 1 cut(s) 327
AjnI CCWGG 6 cut(s) 39, 169, 469, 732, 1382, 1421
AjuI GAANNNNNNNTTGG 2 cut(s) 850, 882
AluBI AGCT 7 cut(s) 116, 217, 277, 310, 398, 1103, 1464
AluI AGCT 7 cut(s) 116, 217, 277, 310, 398, 1103, 1464
Alw21I GWGCWC 2 cut(s) 850, 1105
Alw26I GTCTC 4 cut(s) 22, 1624, 1652, 2044
AlwI GGATC 6 cut(s) 1252, 1265, 1362, 1562, 1859, 1998
AoxI GGCC 8 cut(s) 109, 445, 467, 916, 1335, 1864, 1939, 1972
ApeKI GCWGC 3 cut(s) 4, 217, 2211
ApoI RAATTY 3 cut(s) 233, 459, 1795
Asp700I GAANNNNTTC 4 cut(s) 207, 681, 952, 1818
AspLEI GCGC 1 cut(s) 2050
AspS9I GGNCC 4 cut(s) 110, 1760, 1864, 1972
AsuHPI GGTGA 4 cut(s) 316, 988, 1918, 2173
AvaII GGWCC 1 cut(s) 1760
AxyI CCTNAGG 1 cut(s) 1936
BalI TGGCCA 2 cut(s) 447, 1337
BamHI GGATCC 1 cut(s) 1257
BanI GGYRCC 2 cut(s) 1665, 2029
BanII GRGCYC 3 cut(s) 1105, 1876, 1997
BbsI GAAGAC 2 cut(s) 28, 1886
Bbv12I GWGCWC 2 cut(s) 850, 1105
BbvCI CCTCAGC 1 cut(s) 394
BbvI GCAGC 3 cut(s) 16, 204, 2223
BccI CCATC 1 cut(s) 1082
BceAI ACGGC 4 cut(s) 643, 1851, 1899, 2119
BcgI CGANNNNNNTGC 4 cut(s) 1875, 1909, 2025, 2059
BciT130I CCWGG 6 cut(s) 41, 171, 471, 734, 1384, 1423
BciVI GTATCC 2 cut(s) 177, 193
BcoDI GTCTC 4 cut(s) 22, 1624, 1652, 2044
BfaI CTAG 3 cut(s) 1295, 1568, 1811
BfmI CTRYAG 5 cut(s) 82, 781, 1459, 1671, 2034
BfuAI ACCTGC 1 cut(s) 89
BfuI GTATCC 2 cut(s) 177, 193
BglII AGATCT 1 cut(s) 531
BisI GCNGC 4 cut(s) 5, 218, 2096, 2212
BlsI GCNGC 4 cut(s) 6, 219, 2097, 2213
BmcAI AGTACT 1 cut(s) 994
Bme1390I CCNGG 6 cut(s) 41, 171, 471, 734, 1384, 1423
Bme18I GGWCC 1 cut(s) 1760
BmgT120I GGNCC 4 cut(s) 110, 1760, 1864, 1972
BmiI GGNNCC 9 cut(s) 600, 925, 1259, 1667, 1761, 1865, 1873, 2031, 2133
BmrFI CCNGG 6 cut(s) 41, 171, 471, 734, 1384, 1423
BmrI ACTGGG 1 cut(s) 221
BmsI GCATC 3 cut(s) 737, 1235, 1603
BmuI ACTGGG 1 cut(s) 221
BpiI GAAGAC 2 cut(s) 28, 1886
BpmI CTGGAG 3 cut(s) 1405, 2174, 2278
Bpu10I CCTNAGC 1 cut(s) 394
BpuEI CTTGAG 3 cut(s) 233, 460, 1502
BsaHI GRCGYC 1 cut(s) 2010
BsaI GGTCTC 1 cut(s) 1652
BsaJI CCNNGG 9 cut(s) 170, 470, 732, 733, 919, 1240, 1350, 1383, 1867
BsaWI WCCGGW 1 cut(s) 2128
BsaXI ACNNNNNCTCC 4 cut(s) 1720, 1750, 2251, 2281
Bsc4I CCNNNNNNNGG 5 cut(s) 688, 1692, 1882, 1941, 2174
Bse118I RCCGGY 1 cut(s) 2062
Bse1I ACTGG 3 cut(s) 227, 596, 762
Bse21I CCTNAGG 1 cut(s) 1936
Bse3DI GCAATG 2 cut(s) 1401, 2082
BseBI CCWGG 6 cut(s) 41, 171, 471, 734, 1384, 1423
BseDI CCNNGG 9 cut(s) 170, 470, 732, 733, 919, 1240, 1350, 1383, 1867
BseGI GGATG 5 cut(s) 50, 373, 728, 1093, 1250
BseLI CCNNNNNNNGG 5 cut(s) 688, 1692, 1882, 1941, 2174
BseMI GCAATG 2 cut(s) 1401, 2082
BseMII CTCAG 9 cut(s) 366, 408, 510, 561, 1769, 1815, 1950, 1990, 2216
BseNI ACTGG 3 cut(s) 227, 596, 762
BseRI GAGGAG 1 cut(s) 1731
BseXI GCAGC 3 cut(s) 16, 204, 2223
BseYI CCCAGC 1 cut(s) 112
BsgI GTGCAG 2 cut(s) 172, 1220
Bsh1285I CGRYCG 2 cut(s) 1913, 2168
BshFI GGCC 8 cut(s) 111, 447, 469, 918, 1337, 1866, 1941, 1974
BshNI GGYRCC 2 cut(s) 1665, 2029
BsiEI CGRYCG 2 cut(s) 1913, 2168
BsiHKAI GWGCWC 2 cut(s) 850, 1105
BsiSI CCGG 4 cut(s) 1942, 2022, 2063, 2129
BslFI GGGAC 4 cut(s) 416, 946, 1053, 2190
BslI CCNNNNNNNGG 5 cut(s) 688, 1692, 1882, 1941, 2174
BsmAI GTCTC 4 cut(s) 22, 1624, 1652, 2044
BsmBI CGTCTC 1 cut(s) 22
BsmFI GGGAC 4 cut(s) 416, 946, 1053, 2190
BsmI GAATGC 2 cut(s) 683, 1656
BsnI GGCC 8 cut(s) 111, 447, 469, 918, 1337, 1866, 1941, 1974
Bso31I GGTCTC 1 cut(s) 1652
Bsp1286I GDGCHC 4 cut(s) 850, 1105, 1876, 1997
Bsp143I GATC 9 cut(s) 531, 1257, 1354, 1554, 1675, 1851, 1910, 2003, 2115
BspACI CCGC 5 cut(s) 974, 1085, 1380, 1898, 2096
BspANI GGCC 8 cut(s) 111, 447, 469, 918, 1337, 1866, 1941, 1974
BspCNI CTCAG 9 cut(s) 365, 407, 509, 560, 1768, 1816, 1949, 1989, 2217
BspLI GGNNCC 9 cut(s) 600, 925, 1259, 1667, 1761, 1865, 1873, 2031, 2133
BspMAI CTGCAG 3 cut(s) 86, 1675, 2038
BspMI ACCTGC 1 cut(s) 89
BspPI GGATC 6 cut(s) 1252, 1265, 1362, 1562, 1859, 1998
BspT107I GGYRCC 2 cut(s) 1665, 2029
BspTNI GGTCTC 1 cut(s) 1652
BsrDI GCAATG 2 cut(s) 1401, 2082
BsrFI RCCGGY 1 cut(s) 2062
BsrI ACTGG 3 cut(s) 227, 596, 762
BssAI RCCGGY 1 cut(s) 2062
BssECI CCNNGG 9 cut(s) 170, 470, 732, 733, 919, 1240, 1350, 1383, 1867
BssMI GATC 9 cut(s) 531, 1257, 1354, 1554, 1675, 1851, 1910, 2003, 2115
BssNI GRCGYC 1 cut(s) 2010
BssT1I CCWWGG 3 cut(s) 919, 1240, 1350
Bst2UI CCWGG 6 cut(s) 41, 171, 471, 734, 1384, 1423
Bst4CI ACNGT 5 cut(s) 419, 711, 785, 937, 1985
Bst6I CTCTTC 2 cut(s) 1005, 1622
BstACI GRCGYC 1 cut(s) 2010
BstAPI GCANNNNNTGC 1 cut(s) 615
BstC8I GCNNGC 2 cut(s) 299, 2034
BstDSI CCRYGG 1 cut(s) 1867
BstF5I GGATG 5 cut(s) 50, 373, 728, 1093, 1250
BstHHI GCGC 1 cut(s) 2050
BstKTI GATC 9 cut(s) 534, 1260, 1357, 1557, 1678, 1854, 1913, 2006, 2118
BstMAI GTCTC 4 cut(s) 22, 1624, 1652, 2044
BstMBI GATC 9 cut(s) 531, 1257, 1354, 1554, 1675, 1851, 1910, 2003, 2115
BstMCI CGRYCG 2 cut(s) 1913, 2168
BstMWI GCNNNNNNNGC 5 cut(s) 307, 444, 615, 725, 1622
BstNI CCWGG 6 cut(s) 41, 171, 471, 734, 1384, 1423
BstNSI RCATGY 1 cut(s) 331
BstSCI CCNGG 6 cut(s) 39, 169, 469, 732, 1382, 1421
BstSFI CTRYAG 5 cut(s) 82, 781, 1459, 1671, 2034
BstV1I GCAGC 3 cut(s) 16, 204, 2223
BstV2I GAAGAC 2 cut(s) 28, 1886
BstX2I RGATCY 4 cut(s) 531, 1257, 1554, 2003
BstYI RGATCY 4 cut(s) 531, 1257, 1554, 2003
Bsu36I CCTNAGG 1 cut(s) 1936
BsuI GTATCC 2 cut(s) 177, 193
BsuRI GGCC 8 cut(s) 111, 447, 469, 918, 1337, 1866, 1941, 1974
BtgI CCRYGG 1 cut(s) 1867
BtsCI GGATG 5 cut(s) 50, 373, 728, 1093, 1250
BtsIMutI CAGTG 2 cut(s) 189, 2020
BveI ACCTGC 1 cut(s) 89
Cac8I GCNNGC 2 cut(s) 299, 2034
CfoI GCGC 1 cut(s) 2050
Cfr10I RCCGGY 1 cut(s) 2062
Cfr13I GGNCC 4 cut(s) 110, 1760, 1864, 1972
Csp6I GTAC 8 cut(s) 525, 666, 746, 752, 993, 1399, 1475, 1782
CspCI CAANNNNNGTGG 2 cut(s) 619, 654
CviQI GTAC 8 cut(s) 525, 666, 746, 752, 993, 1399, 1475, 1782
DpnI GATC 9 cut(s) 533, 1259, 1356, 1556, 1677, 1853, 1912, 2005, 2117
DpnII GATC 9 cut(s) 531, 1257, 1354, 1554, 1675, 1851, 1910, 2003, 2115
DraI TTTAAA 1 cut(s) 1800
DrdI GACNNNNNNGTC 2 cut(s) 1888, 1996
DseDI GACNNNNNNGTC 2 cut(s) 1888, 1996
EaeI YGGCCR 2 cut(s) 445, 1335
Eam1104I CTCTTC 2 cut(s) 1005, 1622
EarI CTCTTC 2 cut(s) 1005, 1622
EciI GGCGGA 1 cut(s) 1913
Ecl136II GAGCTC 1 cut(s) 1103
Eco130I CCWWGG 3 cut(s) 919, 1240, 1350
Eco24I GRGCYC 3 cut(s) 1105, 1876, 1997
Eco31I GGTCTC 1 cut(s) 1652
Eco32I GATATC 1 cut(s) 1273
Eco47I GGWCC 1 cut(s) 1760
Eco53kI GAGCTC 1 cut(s) 1103
Eco57I CTGAAG 1 cut(s) 1431
Eco81I CCTNAGG 1 cut(s) 1936
EcoICRI GAGCTC 1 cut(s) 1103
EcoRII CCWGG 6 cut(s) 39, 169, 469, 732, 1382, 1421
EcoRV GATATC 1 cut(s) 1273
EcoT14I CCWWGG 3 cut(s) 919, 1240, 1350
EcoT38I GRGCYC 3 cut(s) 1105, 1876, 1997
ErhI CCWWGG 3 cut(s) 919, 1240, 1350
Esp3I CGTCTC 1 cut(s) 22
FalI AAGNNNNNCTT 2 cut(s) 1771, 1803
FaqI GGGAC 4 cut(s) 416, 946, 1053, 2190
FblI GTMKAC 2 cut(s) 453, 780
Fnu4HI GCNGC 4 cut(s) 5, 218, 2096, 2212
FokI GGATG 5 cut(s) 37, 380, 715, 1100, 1257
FriOI GRGCYC 3 cut(s) 1105, 1876, 1997
Fsp4HI GCNGC 4 cut(s) 5, 218, 2096, 2212
FspBI CTAG 3 cut(s) 1295, 1568, 1811
GlaI GCGC 1 cut(s) 2049
GluI GCNGC 4 cut(s) 5, 218, 2096, 2212
GsaI CCCAGC 1 cut(s) 116
GsuI CTGGAG 3 cut(s) 1405, 2174, 2278
HaeIII GGCC 8 cut(s) 111, 447, 469, 918, 1337, 1866, 1941, 1974
HapII CCGG 4 cut(s) 1942, 2022, 2063, 2129
HhaI GCGC 1 cut(s) 2050
Hin1I GRCGYC 1 cut(s) 2010
Hin6I GCGC 1 cut(s) 2048
HinP1I GCGC 1 cut(s) 2048
HinfI GANTC 9 cut(s) 123, 262, 407, 808, 1077, 2018, 2090, 2149, 2178
HpaII CCGG 4 cut(s) 1942, 2022, 2063, 2129
HphI GGTGA 4 cut(s) 316, 988, 1918, 2173
Hpy166II GTNNAC 6 cut(s) 322, 454, 701, 781, 1540, 1784
Hpy188III TCNNGA 6 cut(s) 212, 1568, 1791, 1823, 2001, 2153
Hpy8I GTNNAC 6 cut(s) 322, 454, 701, 781, 1540, 1784
Hpy99I CGWCG 4 cut(s) 1993, 2012, 2047, 2205
HpyAV CCTTC 7 cut(s) 352, 686, 692, 1601, 1692, 1706, 1797
HpyCH4III ACNGT 5 cut(s) 419, 711, 785, 937, 1985
HpyCH4IV ACGT 2 cut(s) 2010, 2200
HpyF10VI GCNNNNNNNGC 5 cut(s) 307, 444, 615, 725, 1622
HpySE526I ACGT 2 cut(s) 2010, 2200
Hsp92I GRCGYC 1 cut(s) 2010
HspAI GCGC 1 cut(s) 2048
Kzo9I GATC 9 cut(s) 531, 1257, 1354, 1554, 1675, 1851, 1910, 2003, 2115
LmnI GCTCC 4 cut(s) 598, 923, 1871, 2131
Lsp1109I GCAGC 3 cut(s) 16, 204, 2223
LweI GCATC 3 cut(s) 737, 1235, 1603
MaeI CTAG 3 cut(s) 1295, 1568, 1811
MaeII ACGT 2 cut(s) 2010, 2200
MaeIII GTNAC 2 cut(s) 2015, 2204
MalI GATC 9 cut(s) 533, 1259, 1356, 1556, 1677, 1853, 1912, 2005, 2117
MboI GATC 9 cut(s) 531, 1257, 1354, 1554, 1675, 1851, 1910, 2003, 2115
MfeI CAATTG 1 cut(s) 385
MflI RGATCY 4 cut(s) 531, 1257, 1554, 2003
MhlI GDGCHC 4 cut(s) 850, 1105, 1876, 1997
MlsI TGGCCA 2 cut(s) 447, 1337
MluNI TGGCCA 2 cut(s) 447, 1337
MlyI GAGTC 4 cut(s) 2012, 2099, 2143, 2172
MmeI TCCRAC 6 cut(s) 1054, 1689, 1829, 1831, 2012, 2031
Mox20I TGGCCA 2 cut(s) 447, 1337
MroXI GAANNNNTTC 4 cut(s) 207, 681, 952, 1818
MscI TGGCCA 2 cut(s) 447, 1337
MslI CAYNNNNRTG 1 cut(s) 1056
Msp20I TGGCCA 2 cut(s) 447, 1337
MspA1I CMGCKG 1 cut(s) 398
MspI CCGG 4 cut(s) 1942, 2022, 2063, 2129
MspR9I CCNGG 6 cut(s) 41, 171, 471, 734, 1384, 1423
MunI CAATTG 1 cut(s) 385
Mva1269I GAATGC 2 cut(s) 683, 1656
MvaI CCWGG 6 cut(s) 41, 171, 471, 734, 1384, 1423
MwoI GCNNNNNNNGC 5 cut(s) 307, 444, 615, 725, 1622
NdeII GATC 9 cut(s) 531, 1257, 1354, 1554, 1675, 1851, 1910, 2003, 2115
NlaIV GGNNCC 9 cut(s) 600, 925, 1259, 1667, 1761, 1865, 1873, 2031, 2133
NmeAIII GCCGAG 1 cut(s) 2124
NmuCI GTSAC 1 cut(s) 2015
NspI RCATGY 1 cut(s) 331
PaqCI CACCTGC 1 cut(s) 89
PasI CCCWGGG 1 cut(s) 733
PciI ACATGT 1 cut(s) 327
PcsI WCGNNNNNNNCGW 1 cut(s) 1901
PctI GAATGC 2 cut(s) 683, 1656
PdmI GAANNNNTTC 4 cut(s) 207, 681, 952, 1818
PfeI GAWTC 5 cut(s) 123, 262, 407, 808, 1077
PflFI GACNNNGTC 1 cut(s) 2089
PfoI TCCNGGA 1 cut(s) 1421
PkrI GCNGC 4 cut(s) 6, 219, 2097, 2213
Ple19I CGATCG 1 cut(s) 1913
PleI GAGTC 4 cut(s) 2012, 2098, 2143, 2172
PpsI GAGTC 4 cut(s) 2012, 2098, 2143, 2172
PscI ACATGT 1 cut(s) 327
Psp124BI GAGCTC 1 cut(s) 1105
Psp6I CCWGG 6 cut(s) 39, 169, 469, 732, 1382, 1421
PspFI CCCAGC 1 cut(s) 112
PspGI CCWGG 6 cut(s) 39, 169, 469, 732, 1382, 1421
PspN4I GGNNCC 9 cut(s) 600, 925, 1259, 1667, 1761, 1865, 1873, 2031, 2133
PspPI GGNCC 4 cut(s) 110, 1760, 1864, 1972
PstI CTGCAG 3 cut(s) 86, 1675, 2038
PsuI RGATCY 4 cut(s) 531, 1257, 1554, 2003
PsyI GACNNNGTC 1 cut(s) 2089
PvuI CGATCG 1 cut(s) 1913
PvuII CAGCTG 1 cut(s) 398
RsaI GTAC 8 cut(s) 526, 667, 747, 753, 994, 1400, 1476, 1783
RsaNI GTAC 8 cut(s) 525, 666, 746, 752, 993, 1399, 1475, 1782
RseI CAYNNNNRTG 1 cut(s) 1056
SacI GAGCTC 1 cut(s) 1105
SatI GCNGC 4 cut(s) 5, 218, 2096, 2212
Sau3AI GATC 9 cut(s) 531, 1257, 1354, 1554, 1675, 1851, 1910, 2003, 2115
Sau96I GGNCC 4 cut(s) 110, 1760, 1864, 1972
ScaI AGTACT 1 cut(s) 994
SchI GAGTC 4 cut(s) 2012, 2099, 2143, 2172
ScrFI CCNGG 6 cut(s) 41, 171, 471, 734, 1384, 1423
SduI GDGCHC 4 cut(s) 850, 1105, 1876, 1997
SfaNI GCATC 3 cut(s) 737, 1235, 1603
SfcI CTRYAG 5 cut(s) 82, 781, 1459, 1671, 2034
SinI GGWCC 1 cut(s) 1760
SmiI ATTTAAAT 1 cut(s) 1800
SmiMI CAYNNNNRTG 1 cut(s) 1056
SmlI CTYRAG 3 cut(s) 212, 439, 1481
SmoI CTYRAG 3 cut(s) 212, 439, 1481
SsiI CCGC 5 cut(s) 974, 1085, 1380, 1898, 2096
SspMI CTAG 3 cut(s) 1295, 1568, 1811
SstI GAGCTC 1 cut(s) 1105
StyD4I CCNGG 6 cut(s) 39, 169, 469, 732, 1382, 1421
StyI CCWWGG 3 cut(s) 919, 1240, 1350
SwaI ATTTAAAT 1 cut(s) 1800
TaaI ACNGT 5 cut(s) 419, 711, 785, 937, 1985
TaiI ACGT 2 cut(s) 2013, 2203
TaqI TCGA 5 cut(s) 410, 1066, 1909, 1913, 2164
TaqII GACCGA 2 cut(s) 1944, 2182
TatI WGTACW 3 cut(s) 745, 992, 1781
TauI GCSGC 1 cut(s) 2098
TfiI GAWTC 5 cut(s) 123, 262, 407, 808, 1077
TscAI CASTG 2 cut(s) 196, 2020
TseFI GTSAC 1 cut(s) 2015
TseI GCWGC 3 cut(s) 4, 217, 2211
Tsp45I GTSAC 1 cut(s) 2015
TspDTI ATGAA 8 cut(s) 674, 729, 1038, 1135, 1140, 1548, 2139, 2253
TspGWI ACGGA 3 cut(s) 611, 1270, 2102
TspRI CASTG 2 cut(s) 196, 2020
Tth111I GACNNNGTC 1 cut(s) 2089
VpaK11BI GGWCC 1 cut(s) 1760
XapI RAATTY 3 cut(s) 233, 459, 1795
XbaI TCTAGA 1 cut(s) 1567
XceI RCATGY 1 cut(s) 331
XcmI CCANNNNNNNNNTGG 2 cut(s) 926, 1693
XmiI GTMKAC 2 cut(s) 453, 780
XmnI GAANNNNTTC 4 cut(s) 207, 681, 952, 1818
XspI CTAG 3 cut(s) 1295, 1568, 1811
ZraI GACGTC 1 cut(s) 2011
ZrmI AGTACT 1 cut(s) 994
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.