RchiOBHm_Chr5g0047751

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000107
Physical Location & Seq
Reverse (-)
44292600 .. 44294669
2070 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ32562

Sequence Viewer

Length: 1794 bp
ATGCTTCTAACTATGAGTTTCTTCTTCTGGTTGCTCCTGATATTTGTAGATGTAGATGTTGTGCATGGTGGAGGAGTAGGTCGTGAAAATTGCACAGAAACAAGATGTAGCAGCGATGGCCCAGCTATCCGGTTCCCATTTCGACTGAAAGGTAGGCAACCGGTCCAATGTGGTTCCCCGGGCTTTGATCTTGCATGCACCAACGACAACCAGACACTACTTCAGATGCCATCATCATCTAAGCTCTTTGTTACAGAGATTAACTACAAATCACAGACAATTGAAGCAGAACTTGCACCTGATTGCTTGGACGGAGACATTTTCGACCTTGGTTCTTCTTCTACCTTTAAATATGTAGGCAACGCAAGCTTGTTCAGTTGCCCACCATCAACTGTGAGAGATCAATATATTACAGCATATCCCTACAAGTACAATTCTCGTTGTCTGGCAAGATTGAGCCCTTGCCATGGTAATCCAGGCAACCAAATTTTTGCTTTTAGGACAGGTTGTTGTTCTATTGATAACATTCCCTTGGTGTCTTGTACCAAGGTGCATGACTACTTAGATTATCTTGCATACACAGATGACTATATATTTGGCAATATATATTCACGCGTGTCTCTCTACTGGTCCATACCATCTTGTAAATTCCATTGTAAAGAAAAGGGCGAGCTATGTCGATTCACAAATCAGACAGATCCTCAAATTCAATGCTTGGATAGACCCAAAGCCAGAGCAGGTCATGTCATAGTATGTATCGGACTTTTTATCGTAGTTACTCATATTCTTATATCGACTGGAGCAATAATCAGCTATCCCTTTTGCACTAAAAGACAAGAAAATCAGCTGAGAATTAAAAGATTTTTGGATGACTACAGAGCTCTTAAGCTAAGCAGATATTCTTATGCAGATATTAAGAGGATAACGGAGCAGTTCAAGGAGAAGCTGGGTCAAGGGGCCTATGGAACTGTCTTTAAAGGTAAACTTTCCTCTGAATTACTTGTTGCTGTGAAAATCCTCAACAATTCAAATGAGAAAGGGGAAGATTTTATTAATGAAGTGGGCACAATGAGTCAAATCCACCATGTCAATGTGGTACGCTTGGTTGGTTACTGTGCTGATGGCTTTATACGAGCTCTTGTTTATGAATTCTTACCAAACGGTCCACTCCAGAATTTCTTATCATCAGCAGATAATGAGAGTTCGTTCCTTGGTTGGGATAAGTTGCAACATATTGCTTTAGGTATAGCCAAAGGAATTGAATATATTCACCAAGGTTGTGAACAACAAATCCTCCACTTTGACATCAAACCCCATAATGTGTTGCTAGACCATGATTTCACTCCAAAAGTTTCCGATTTTGGTTTAGCCAAGTTGTGCTCTAAGGATCAAAGCACGGTATCCATGACTGCAGCGAGGGGAACCATGGGCTACATTGCACCAGAAGTCTTCTCTAGGAACTTCGGTAAGGTGTCATATAAGGCAGATGTCTATAGTTTTGGAACATTGCTGCAGATAAAGAATTTTAAAGTTATGGAAGGCTCCACCAGCCAGGTCTACTTCCCAGAATGGATCTATAACCTCTTAGAACAAGGGAACGACCTTCGCATCCATATTGGAGACGAAGGAAATGTTGAAATTGCTAAGAAACTTGCGGTTGTGGGTCTATGGTGCATCCAATGGCATCCAATAGACCGTCCTTCCATGAAAACAGTAGTTCAAATGTTGGAAAGGGAAGGTGACAATCTGACCATGCCTCCTAATCCTTTTGCCTCTACTTCATCTTTGAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase Pkinase_Tyr

Protein Analysis

597

Amino Acids

67.08

Weight (kDa)

6.92

Isoelectric Point (pI)

37.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 31 - 95 1.4e-17 Wall-associated receptor kinase galacturonan-binding
PK_Tyr_Ser-Thr PF07714 311 - 576 3.5e-43 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 312 - 574 9.7e-42 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 728
AccI GTMKAC 1 cut(s) 1557
AccII CGCG 1 cut(s) 615
AciI CCGC 1 cut(s) 1655
AclWI GGATC 3 cut(s) 692, 1395, 1580
AcsI RAATTY 6 cut(s) 486, 647, 705, 1148, 1174, 1522
AcuI CTGAAG 1 cut(s) 206
AfaI GTAC 3 cut(s) 431, 544, 1098
AfiI CCNNNNNNNGG 2 cut(s) 467, 1216
AflII CTTAAG 1 cut(s) 884
AflIII ACRYGT 1 cut(s) 613
AgeI ACCGGT 1 cut(s) 160
AgsI TTSAA 7 cut(s) 284, 710, 937, 1029, 1262, 1637, 1721
AjnI CCWGG 2 cut(s) 475, 1551
AloI GAACNNNNNNTCC 2 cut(s) 1275, 1307
Alw21I GWGCWC 3 cut(s) 883, 1138, 1382
Alw26I GTCTC 3 cut(s) 309, 624, 1614
AlwI GGATC 3 cut(s) 692, 1395, 1580
Ama87I CYCGRG 1 cut(s) 178
AoxI GGCC 2 cut(s) 118, 957
ApeKI GCWGC 3 cut(s) 111, 1412, 1510
ApoI RAATTY 6 cut(s) 486, 647, 705, 1148, 1174, 1522
ArsI GACNNNNNNTTYG 2 cut(s) 578, 610
AseI ATTAAT 1 cut(s) 1053
AsiGI ACCGGT 1 cut(s) 160
Asp700I GAANNNNTTC 1 cut(s) 1266
AspS9I GGNCC 5 cut(s) 119, 163, 630, 957, 1163
AsuC2I CCSGG 2 cut(s) 179, 180
AsuHPI GGTGA 2 cut(s) 1262, 1751
AvaI CYCGRG 1 cut(s) 178
AvaII GGWCC 3 cut(s) 163, 630, 1163
BaeGI GKGCMC 1 cut(s) 1067
BanII GRGCYC 3 cut(s) 461, 883, 1138
BbsI GAAGAC 1 cut(s) 1441
Bbv12I GWGCWC 3 cut(s) 883, 1138, 1382
BbvI GCAGC 3 cut(s) 123, 1424, 1497
BccI CCATC 5 cut(s) 110, 238, 394, 646, 1115
BciT130I CCWGG 2 cut(s) 477, 1553
BciVI GTATCC 1 cut(s) 1411
BcnI CCSGG 2 cut(s) 179, 180
BcoDI GTCTC 3 cut(s) 309, 624, 1614
BfaI CTAG 2 cut(s) 1328, 1455
BfmI CTRYAG 4 cut(s) 874, 1410, 1492, 1511
BfrI CTTAAG 1 cut(s) 884
BfuAI ACCTGC 1 cut(s) 728
BfuI GTATCC 1 cut(s) 1411
BisI GCNGC 3 cut(s) 112, 1413, 1511
BlpI GCTNAGC 1 cut(s) 890
BlsI GCNGC 3 cut(s) 113, 1414, 1512
Bme1390I CCNGG 4 cut(s) 179, 180, 477, 1553
Bme18I GGWCC 3 cut(s) 163, 630, 1163
BmeT110I CYCGRG 1 cut(s) 178
BmgT120I GGNCC 5 cut(s) 119, 163, 630, 957, 1163
BmiI GGNNCC 5 cut(s) 134, 175, 958, 1423, 1543
BmrFI CCNGG 4 cut(s) 179, 180, 477, 1553
BmsI GCATC 4 cut(s) 216, 1617, 1683, 1693
BpiI GAAGAC 1 cut(s) 1441
BpmI CTGGAG 2 cut(s) 819, 1154
Bpu1102I GCTNAGC 1 cut(s) 890
BpuMI CCSGG 2 cut(s) 179, 180
BsaJI CCNNGG 9 cut(s) 177, 178, 328, 466, 531, 546, 1210, 1273, 1425
BsaWI WCCGGW 2 cut(s) 129, 160
BsaXI ACNNNNNCTCC 4 cut(s) 1278, 1308, 1741, 1771
Bsc4I CCNNNNNNNGG 2 cut(s) 467, 1216
Bse118I RCCGGY 1 cut(s) 160
Bse1I ACTGG 2 cut(s) 632, 802
Bse3DI GCAATG 2 cut(s) 1434, 1505
BseBI CCWGG 2 cut(s) 477, 1553
BseDI CCNNGG 9 cut(s) 177, 178, 328, 466, 531, 546, 1210, 1273, 1425
BseGI GGATG 4 cut(s) 874, 1608, 1674, 1684
BseLI CCNNNNNNNGG 2 cut(s) 467, 1216
BseMI GCAATG 2 cut(s) 1434, 1505
BseMII CTCAG 1 cut(s) 839
BseNI ACTGG 2 cut(s) 632, 802
BseRI GAGGAG 1 cut(s) 87
BseSI GKGCMC 1 cut(s) 1067
BseXI GCAGC 3 cut(s) 123, 1424, 1497
BseYI CCCAGC 2 cut(s) 121, 946
Bsh1236I CGCG 1 cut(s) 615
BshFI GGCC 2 cut(s) 120, 959
BshTI ACCGGT 1 cut(s) 160
BsiHKAI GWGCWC 3 cut(s) 883, 1138, 1382
BsiHKCI CYCGRG 1 cut(s) 178
BsiSI CCGG 3 cut(s) 130, 161, 179
BslI CCNNNNNNNGG 2 cut(s) 467, 1216
BsmAI GTCTC 3 cut(s) 309, 624, 1614
BsmBI CGTCTC 1 cut(s) 1614
BsnI GGCC 2 cut(s) 120, 959
BsoBI CYCGRG 1 cut(s) 178
Bsp1286I GDGCHC 5 cut(s) 461, 883, 1067, 1138, 1382
Bsp143I GATC 5 cut(s) 187, 400, 697, 1387, 1572
Bsp1720I GCTNAGC 1 cut(s) 890
Bsp19I CCATGG 2 cut(s) 466, 1425
BspACI CCGC 1 cut(s) 1655
BspANI GGCC 2 cut(s) 120, 959
BspCNI CTCAG 1 cut(s) 840
BspFNI CGCG 1 cut(s) 615
BspLI GGNNCC 5 cut(s) 134, 175, 958, 1423, 1543
BspMAI CTGCAG 2 cut(s) 1414, 1515
BspMI ACCTGC 1 cut(s) 728
BspPI GGATC 3 cut(s) 692, 1395, 1580
BspTI CTTAAG 1 cut(s) 884
BsrDI GCAATG 2 cut(s) 1434, 1505
BsrFI RCCGGY 1 cut(s) 160
BsrI ACTGG 2 cut(s) 632, 802
BssAI RCCGGY 1 cut(s) 160
BssECI CCNNGG 9 cut(s) 177, 178, 328, 466, 531, 546, 1210, 1273, 1425
BssMI GATC 5 cut(s) 187, 400, 697, 1387, 1572
BssT1I CCWWGG 7 cut(s) 328, 466, 531, 546, 1210, 1273, 1425
Bst2UI CCWGG 2 cut(s) 477, 1553
Bst4CI ACNGT 7 cut(s) 394, 970, 1115, 1163, 1399, 1697, 1714
BstAFI CTTAAG 1 cut(s) 884
BstAPI GCANNNNNTGC 1 cut(s) 293
BstC8I GCNNGC 3 cut(s) 196, 367, 671
BstDEI CTNAG 7 cut(s) 240, 562, 848, 890, 1383, 1585, 1644
BstDSI CCRYGG 2 cut(s) 466, 1425
BstF5I GGATG 4 cut(s) 874, 1608, 1674, 1684
BstFNI CGCG 1 cut(s) 615
BstKTI GATC 5 cut(s) 190, 403, 700, 1390, 1575
BstMAI GTCTC 3 cut(s) 309, 624, 1614
BstMBI GATC 5 cut(s) 187, 400, 697, 1387, 1572
BstMWI GCNNNNNNNGC 4 cut(s) 117, 293, 366, 1548
BstNI CCWGG 2 cut(s) 477, 1553
BstNSI RCATGY 1 cut(s) 198
BstSCI CCNGG 4 cut(s) 177, 178, 475, 1551
BstSFI CTRYAG 4 cut(s) 874, 1410, 1492, 1511
BstSLI GKGCMC 1 cut(s) 1067
BstUI CGCG 1 cut(s) 615
BstV1I GCAGC 3 cut(s) 123, 1424, 1497
BstV2I GAAGAC 1 cut(s) 1441
BstX2I RGATCY 2 cut(s) 697, 1572
BstYI RGATCY 2 cut(s) 697, 1572
BsuI GTATCC 1 cut(s) 1411
BsuRI GGCC 2 cut(s) 120, 959
BtgI CCRYGG 2 cut(s) 466, 1425
BtgZI GCGATG 1 cut(s) 129
BtsCI GGATG 4 cut(s) 874, 1608, 1674, 1684
BveI ACCTGC 1 cut(s) 728
Cac8I GCNNGC 3 cut(s) 196, 367, 671
Cfr10I RCCGGY 1 cut(s) 160
Cfr13I GGNCC 5 cut(s) 119, 163, 630, 957, 1163
Cfr9I CCCGGG 1 cut(s) 178
Csp6I GTAC 3 cut(s) 430, 543, 1097
CspAI ACCGGT 1 cut(s) 160
CviQI GTAC 3 cut(s) 430, 543, 1097
DdeI CTNAG 7 cut(s) 240, 562, 848, 890, 1383, 1585, 1644
DpnI GATC 5 cut(s) 189, 402, 699, 1389, 1574
DpnII GATC 5 cut(s) 187, 400, 697, 1387, 1572
DraI TTTAAA 3 cut(s) 349, 976, 1528
Ecl136II GAGCTC 2 cut(s) 881, 1136
Eco130I CCWWGG 7 cut(s) 328, 466, 531, 546, 1210, 1273, 1425
Eco24I GRGCYC 3 cut(s) 461, 883, 1138
Eco47I GGWCC 3 cut(s) 163, 630, 1163
Eco53kI GAGCTC 2 cut(s) 881, 1136
Eco57I CTGAAG 1 cut(s) 206
Eco88I CYCGRG 1 cut(s) 178
EcoICRI GAGCTC 2 cut(s) 881, 1136
EcoO109I RGGNCCY 1 cut(s) 957
EcoRI GAATTC 1 cut(s) 1148
EcoRII CCWGG 2 cut(s) 475, 1551
EcoT14I CCWWGG 7 cut(s) 328, 466, 531, 546, 1210, 1273, 1425
EcoT38I GRGCYC 3 cut(s) 461, 883, 1138
ErhI CCWWGG 7 cut(s) 328, 466, 531, 546, 1210, 1273, 1425
Esp3I CGTCTC 1 cut(s) 1614
FalI AAGNNNNNCTT 4 cut(s) 276, 308, 969, 1001
FblI GTMKAC 1 cut(s) 1557
Fnu4HI GCNGC 3 cut(s) 112, 1413, 1511
FokI GGATG 4 cut(s) 881, 1595, 1661, 1671
FriOI GRGCYC 3 cut(s) 461, 883, 1138
Fsp4HI GCNGC 3 cut(s) 112, 1413, 1511
FspBI CTAG 2 cut(s) 1328, 1455
GluI GCNGC 3 cut(s) 112, 1413, 1511
GsaI CCCAGC 2 cut(s) 125, 950
GsuI CTGGAG 2 cut(s) 819, 1154
HaeIII GGCC 2 cut(s) 120, 959
HapII CCGG 3 cut(s) 130, 161, 179
HindIII AAGCTT 1 cut(s) 367
HinfI GANTC 2 cut(s) 681, 1072
HpaII CCGG 3 cut(s) 130, 161, 179
HphI GGTGA 2 cut(s) 1262, 1751
Hpy166II GTNNAC 4 cut(s) 983, 1166, 1283, 1558
Hpy188I TCNGA 6 cut(s) 225, 693, 761, 994, 1357, 1749
Hpy188III TCNNGA 3 cut(s) 37, 83, 1171
Hpy8I GTNNAC 4 cut(s) 983, 1166, 1283, 1558
HpyAV CCTTC 5 cut(s) 1532, 1613, 1619, 1710, 1730
HpyCH4III ACNGT 7 cut(s) 394, 970, 1115, 1163, 1399, 1697, 1714
HpyF10VI GCNNNNNNNGC 4 cut(s) 117, 293, 366, 1548
HpyF3I CTNAG 7 cut(s) 240, 562, 848, 890, 1383, 1585, 1644
Kzo9I GATC 5 cut(s) 187, 400, 697, 1387, 1572
LmnI GCTCC 4 cut(s) 39, 800, 928, 1547
Lsp1109I GCAGC 3 cut(s) 123, 1424, 1497
LweI GCATC 4 cut(s) 216, 1617, 1683, 1693
MaeI CTAG 2 cut(s) 1328, 1455
MaeIII GTNAC 4 cut(s) 250, 775, 1109, 1739
MalI GATC 5 cut(s) 189, 402, 699, 1389, 1574
MboI GATC 5 cut(s) 187, 400, 697, 1387, 1572
MboII GAAGA 6 cut(s) 13, 16, 327, 330, 1055, 1441
MfeI CAATTG 1 cut(s) 279
MflI RGATCY 2 cut(s) 697, 1572
MhlI GDGCHC 5 cut(s) 461, 883, 1067, 1138, 1382
MluI ACGCGT 1 cut(s) 613
MlyI GAGTC 1 cut(s) 1081
MmeI TCCRAC 1 cut(s) 1707
MroXI GAANNNNTTC 1 cut(s) 1266
MseI TTAA 8 cut(s) 261, 348, 855, 885, 915, 975, 1053, 1527
MslI CAYNNNNRTG 1 cut(s) 1089
MspA1I CMGCKG 1 cut(s) 847
MspCI CTTAAG 1 cut(s) 884
MspI CCGG 3 cut(s) 130, 161, 179
MspR9I CCNGG 4 cut(s) 179, 180, 477, 1553
MunI CAATTG 1 cut(s) 279
MvaI CCWGG 2 cut(s) 477, 1553
MvnI CGCG 1 cut(s) 615
MwoI GCNNNNNNNGC 4 cut(s) 117, 293, 366, 1548
NciI CCSGG 2 cut(s) 179, 180
NcoI CCATGG 2 cut(s) 466, 1425
NdeII GATC 5 cut(s) 187, 400, 697, 1387, 1572
NlaIV GGNNCC 5 cut(s) 134, 175, 958, 1423, 1543
NmuCI GTSAC 1 cut(s) 1739
NspI RCATGY 1 cut(s) 198
PaeI GCATGC 1 cut(s) 198
PdmI GAANNNNTTC 1 cut(s) 1266
PfeI GAWTC 1 cut(s) 681
PinAI ACCGGT 1 cut(s) 160
PkrI GCNGC 3 cut(s) 113, 1414, 1512
PleI GAGTC 1 cut(s) 1080
PpsI GAGTC 1 cut(s) 1080
PshBI ATTAAT 1 cut(s) 1053
Psp124BI GAGCTC 2 cut(s) 883, 1138
Psp6I CCWGG 2 cut(s) 475, 1551
PspFI CCCAGC 2 cut(s) 121, 946
PspGI CCWGG 2 cut(s) 475, 1551
PspN4I GGNNCC 5 cut(s) 134, 175, 958, 1423, 1543
PspPI GGNCC 5 cut(s) 119, 163, 630, 957, 1163
PstI CTGCAG 2 cut(s) 1414, 1515
PsuI RGATCY 2 cut(s) 697, 1572
PvuII CAGCTG 1 cut(s) 847
RsaI GTAC 3 cut(s) 431, 544, 1098
RsaNI GTAC 3 cut(s) 430, 543, 1097
RseI CAYNNNNRTG 1 cut(s) 1089
SacI GAGCTC 2 cut(s) 883, 1138
SaqAI TTAA 8 cut(s) 261, 348, 855, 885, 915, 975, 1053, 1527
SatI GCNGC 3 cut(s) 112, 1413, 1511
Sau3AI GATC 5 cut(s) 187, 400, 697, 1387, 1572
Sau96I GGNCC 5 cut(s) 119, 163, 630, 957, 1163
SchI GAGTC 1 cut(s) 1081
ScrFI CCNGG 4 cut(s) 179, 180, 477, 1553
SduI GDGCHC 5 cut(s) 461, 883, 1067, 1138, 1382
SfaNI GCATC 4 cut(s) 216, 1617, 1683, 1693
SfcI CTRYAG 4 cut(s) 874, 1410, 1492, 1511
SinI GGWCC 3 cut(s) 163, 630, 1163
SmaI CCCGGG 1 cut(s) 180
SmiMI CAYNNNNRTG 1 cut(s) 1089
SmlI CTYRAG 1 cut(s) 884
SmoI CTYRAG 1 cut(s) 884
SphI GCATGC 1 cut(s) 198
SsiI CCGC 1 cut(s) 1655
SspMI CTAG 2 cut(s) 1328, 1455
SstI GAGCTC 2 cut(s) 883, 1138
StyD4I CCNGG 4 cut(s) 177, 178, 475, 1551
StyI CCWWGG 7 cut(s) 328, 466, 531, 546, 1210, 1273, 1425
TaaI ACNGT 7 cut(s) 394, 970, 1115, 1163, 1399, 1697, 1714
TaqI TCGA 4 cut(s) 142, 324, 679, 794
TatI WGTACW 1 cut(s) 429
TfiI GAWTC 1 cut(s) 681
Tru1I TTAA 8 cut(s) 261, 348, 855, 885, 915, 975, 1053, 1527
Tru9I TTAA 8 cut(s) 261, 348, 855, 885, 915, 975, 1053, 1527
TseFI GTSAC 1 cut(s) 1739
TseI GCWGC 3 cut(s) 111, 1412, 1510
Tsp45I GTSAC 1 cut(s) 1739
TspDTI ATGAA 4 cut(s) 1071, 1161, 1721, 1770
TspGWI ACGGA 2 cut(s) 327, 941
TspMI CCCGGG 1 cut(s) 178
Vha464I CTTAAG 1 cut(s) 884
VpaK11BI GGWCC 3 cut(s) 163, 630, 1163
VspI ATTAAT 1 cut(s) 1053
XapI RAATTY 6 cut(s) 486, 647, 705, 1148, 1174, 1522
XceI RCATGY 1 cut(s) 198
XmaI CCCGGG 1 cut(s) 178
XmiI GTMKAC 1 cut(s) 1557
XmnI GAANNNNTTC 1 cut(s) 1266
XspI CTAG 2 cut(s) 1328, 1455
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.