MD02G1247600.v1.1

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Reverse (-)
29782089 .. 29782757
669 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1247600.v1.1.491

Sequence Viewer

Length: 561 bp
ATGGTTCATATCCACCACGTCAACGTGGCTCGCTTGGTTGGTTTTTGTTTGCAAGATATTGCCCTAGGCATAGCCAAAGGAATTGAATATCTTCACCAGGGATGCGATCAACGAATCCTCCATTTCGATATAAAACCCCATAATGTTTTGCTAGACCAAAACTTCAGTCCAAAAATTTCTGATTTTGGTTTGGCCAAGTTATGTTCCAAGGATCAAAGCATGGTGTCTATGACTACAATTAGGGGGACCATGGGGTACATTGCATCCGAAGTGTTCTCCAGGAATTTAGGAAATGTGTCTTACAAGACAGATGTCTATAGCTTTGGAATGCTACTGCTTGAGATGGTAGGAGGAAGGAAGAATATTGGTTTAACCACAGAGGATACTACTAATGAAATTTACTATCCACAATGGATTTATAATCTTCTCGAGGAAGGGGATGACCTACAAATCCATATTGGGGAAGAAGATGGAAAAATTCCAAAGAAACTTGCAATTATAGGGCTATGGTGTATTCAGTGGCACCTAGTGGATCGTCCTGCCATGAAAATGACAGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

187

Amino Acids

21.07

Weight (kDa)

6.03

Isoelectric Point (pI)

41.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 18 - 180 1.2e-25 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 18 - 130 1.9e-19 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 420
AccB1I GGYRCC 1 cut(s) 522
AclWI GGATC 2 cut(s) 219, 540
AcoI YGGCCR 1 cut(s) 192
AcsI RAATTY 4 cut(s) 174, 283, 396, 477
AcuI CTGAAG 1 cut(s) 148
AdeI CACNNNGTG 1 cut(s) 529
AfaI GTAC 1 cut(s) 257
AfiI CCNNNNNNNGG 1 cut(s) 460
AgsI TTSAA 1 cut(s) 86
AjiI CACGTC 1 cut(s) 19
AjnI CCWGG 2 cut(s) 96, 278
AluBI AGCT 1 cut(s) 321
AluI AGCT 1 cut(s) 321
AlwI GGATC 2 cut(s) 219, 540
Ama87I CYCGRG 1 cut(s) 428
AoxI GGCC 1 cut(s) 192
ApoI RAATTY 4 cut(s) 174, 283, 396, 477
ArsI GACNNNNNNTTYG 2 cut(s) 151, 183
Asp700I GAANNNNTTC 1 cut(s) 90
AspA2I CCTAGG 1 cut(s) 64
AspS9I GGNCC 1 cut(s) 246
AsuHPI GGTGA 1 cut(s) 86
AvaI CYCGRG 1 cut(s) 428
AvaII GGWCC 1 cut(s) 246
AvrII CCTAGG 1 cut(s) 64
BalI TGGCCA 1 cut(s) 194
BanI GGYRCC 1 cut(s) 522
BccI CCATC 2 cut(s) 337, 464
BciT130I CCWGG 2 cut(s) 98, 280
BciVI GTATCC 1 cut(s) 376
BfaI CTAG 3 cut(s) 65, 152, 527
BfmI CTRYAG 1 cut(s) 316
BfuI GTATCC 1 cut(s) 376
BlnI CCTAGG 1 cut(s) 64
Bme1390I CCNGG 2 cut(s) 98, 280
Bme18I GGWCC 1 cut(s) 246
BmeT110I CYCGRG 1 cut(s) 428
BmgBI CACGTC 1 cut(s) 19
BmgT120I GGNCC 1 cut(s) 246
BmiI GGNNCC 2 cut(s) 247, 524
BmrFI CCNGG 2 cut(s) 98, 280
BmsI GCATC 2 cut(s) 92, 272
BoxI GACNNNNGTC 1 cut(s) 311
BpmI CTGGAG 1 cut(s) 262
BpuEI CTTGAG 1 cut(s) 359
BsaJI CCNNGG 4 cut(s) 64, 97, 207, 249
BsaXI ACNNNNNCTCC 2 cut(s) 102, 132
Bsc4I CCNNNNNNNGG 1 cut(s) 460
Bse3DI GCAATG 1 cut(s) 258
BseBI CCWGG 2 cut(s) 98, 280
BseDI CCNNGG 4 cut(s) 64, 97, 207, 249
BseGI GGATG 3 cut(s) 107, 263, 445
BseLI CCNNNNNNNGG 1 cut(s) 460
BseMI GCAATG 1 cut(s) 258
BshFI GGCC 1 cut(s) 194
BshNI GGYRCC 1 cut(s) 522
BsiHKCI CYCGRG 1 cut(s) 428
BslFI GGGAC 1 cut(s) 259
BslI CCNNNNNNNGG 1 cut(s) 460
BsmFI GGGAC 1 cut(s) 259
BsmI GAATGC 1 cut(s) 333
BsnI GGCC 1 cut(s) 194
BsoBI CYCGRG 1 cut(s) 428
Bsp143I GATC 3 cut(s) 106, 211, 532
Bsp19I CCATGG 1 cut(s) 249
BspANI GGCC 1 cut(s) 194
BspLI GGNNCC 2 cut(s) 247, 524
BspPI GGATC 2 cut(s) 219, 540
BspT107I GGYRCC 1 cut(s) 522
BsrDI GCAATG 1 cut(s) 258
BssECI CCNNGG 4 cut(s) 64, 97, 207, 249
BssMI GATC 3 cut(s) 106, 211, 532
BssT1I CCWWGG 3 cut(s) 64, 207, 249
Bst2UI CCWGG 2 cut(s) 98, 280
Bst4CI ACNGT 1 cut(s) 556
BstC8I GCNNGC 1 cut(s) 31
BstDSI CCRYGG 1 cut(s) 249
BstF5I GGATG 3 cut(s) 107, 263, 445
BstKTI GATC 3 cut(s) 109, 214, 535
BstMBI GATC 3 cut(s) 106, 211, 532
BstNI CCWGG 2 cut(s) 98, 280
BstPAI GACNNNNGTC 1 cut(s) 311
BstSCI CCNGG 2 cut(s) 96, 278
BstSFI CTRYAG 1 cut(s) 316
BsuI GTATCC 1 cut(s) 376
BsuRI GGCC 1 cut(s) 194
BtgI CCRYGG 1 cut(s) 249
BtrI CACGTC 1 cut(s) 19
BtsCI GGATG 3 cut(s) 107, 263, 445
BtsIMutI CAGTG 1 cut(s) 524
Cac8I GCNNGC 1 cut(s) 31
Cfr13I GGNCC 1 cut(s) 246
Csp6I GTAC 1 cut(s) 256
CviAII CATG 3 cut(s) 220, 250, 544
CviJI RGCY 5 cut(s) 29, 74, 194, 321, 505
CviKI_1 RGCY 5 cut(s) 29, 74, 194, 321, 505
CviQI GTAC 1 cut(s) 256
DpnI GATC 3 cut(s) 108, 213, 534
DpnII GATC 3 cut(s) 106, 211, 532
DraIII CACNNNGTG 1 cut(s) 529
EaeI YGGCCR 1 cut(s) 192
Eco130I CCWWGG 3 cut(s) 64, 207, 249
Eco47I GGWCC 1 cut(s) 246
Eco57I CTGAAG 1 cut(s) 148
Eco88I CYCGRG 1 cut(s) 428
EcoRII CCWGG 2 cut(s) 96, 278
EcoT14I CCWWGG 3 cut(s) 64, 207, 249
ErhI CCWWGG 3 cut(s) 64, 207, 249
FaeI CATG 3 cut(s) 223, 253, 547
FaqI GGGAC 1 cut(s) 259
FatI CATG 3 cut(s) 219, 249, 543
FokI GGATG 3 cut(s) 114, 250, 452
FspBI CTAG 3 cut(s) 65, 152, 527
GsuI CTGGAG 1 cut(s) 262
HaeIII GGCC 1 cut(s) 194
Hin1II CATG 3 cut(s) 223, 253, 547
HincII GTYRAC 1 cut(s) 22
HindII GTYRAC 1 cut(s) 22
HinfI GANTC 1 cut(s) 114
HphI GGTGA 1 cut(s) 86
Hpy166II GTNNAC 1 cut(s) 22
Hpy188I TCNGA 2 cut(s) 181, 268
Hpy188III TCNNGA 1 cut(s) 428
Hpy8I GTNNAC 1 cut(s) 22
HpyAV CCTTC 2 cut(s) 348, 428
HpyCH4III ACNGT 1 cut(s) 556
HpyCH4IV ACGT 2 cut(s) 18, 24
HpyCH4V TGCA 3 cut(s) 52, 263, 494
HpySE526I ACGT 2 cut(s) 18, 24
Hsp92II CATG 3 cut(s) 223, 253, 547
Kzo9I GATC 3 cut(s) 106, 211, 532
LpnPI CCDG 5 cut(s) 83, 110, 265, 292, 552
LweI GCATC 2 cut(s) 92, 272
MaeI CTAG 3 cut(s) 65, 152, 527
MaeII ACGT 2 cut(s) 18, 24
MalI GATC 3 cut(s) 108, 213, 534
MboI GATC 3 cut(s) 106, 211, 532
MboII GAAGA 5 cut(s) 83, 370, 416, 476, 479
MlsI TGGCCA 1 cut(s) 194
MluCI AATT 7 cut(s) 81, 174, 237, 283, 396, 477, 495
MluNI TGGCCA 1 cut(s) 194
MnlI CCTC 4 cut(s) 128, 344, 373, 424
Mox20I TGGCCA 1 cut(s) 194
MroXI GAANNNNTTC 1 cut(s) 90
MscI TGGCCA 1 cut(s) 194
MseI TTAA 1 cut(s) 371
MslI CAYNNNNRTG 1 cut(s) 548
Msp20I TGGCCA 1 cut(s) 194
MspR9I CCNGG 2 cut(s) 98, 280
Mva1269I GAATGC 1 cut(s) 333
MvaI CCWGG 2 cut(s) 98, 280
NcoI CCATGG 1 cut(s) 249
NdeII GATC 3 cut(s) 106, 211, 532
NlaIII CATG 3 cut(s) 223, 253, 547
NlaIV GGNNCC 2 cut(s) 247, 524
PaeR7I CTCGAG 1 cut(s) 428
PctI GAATGC 1 cut(s) 333
PdmI GAANNNNTTC 1 cut(s) 90
PfeI GAWTC 1 cut(s) 114
PfoI TCCNGGA 1 cut(s) 278
PshAI GACNNNNGTC 1 cut(s) 311
PsiI TTATAA 1 cut(s) 420
Psp6I CCWGG 2 cut(s) 96, 278
PspGI CCWGG 2 cut(s) 96, 278
PspN4I GGNNCC 2 cut(s) 247, 524
PspPI GGNCC 1 cut(s) 246
RsaI GTAC 1 cut(s) 257
RsaNI GTAC 1 cut(s) 256
RseI CAYNNNNRTG 1 cut(s) 548
SaqAI TTAA 1 cut(s) 371
Sau3AI GATC 3 cut(s) 106, 211, 532
Sau96I GGNCC 1 cut(s) 246
ScrFI CCNGG 2 cut(s) 98, 280
SetI ASST 5 cut(s) 21, 27, 323, 447, 528
SfaNI GCATC 2 cut(s) 92, 272
SfcI CTRYAG 1 cut(s) 316
Sfr274I CTCGAG 1 cut(s) 428
SinI GGWCC 1 cut(s) 246
SlaI CTCGAG 1 cut(s) 428
SmiMI CAYNNNNRTG 1 cut(s) 548
SmlI CTYRAG 2 cut(s) 338, 428
SmoI CTYRAG 2 cut(s) 338, 428
Sse9I AATT 7 cut(s) 81, 174, 237, 283, 396, 477, 495
SspI AATATT 1 cut(s) 364
SspMI CTAG 3 cut(s) 65, 152, 527
StyD4I CCNGG 2 cut(s) 96, 278
StyI CCWWGG 3 cut(s) 64, 207, 249
TaaI ACNGT 1 cut(s) 556
TaiI ACGT 2 cut(s) 21, 27
TaqI TCGA 2 cut(s) 126, 429
TasI AATT 7 cut(s) 81, 174, 237, 283, 396, 477, 495
TfiI GAWTC 1 cut(s) 114
Tru1I TTAA 1 cut(s) 371
Tru9I TTAA 1 cut(s) 371
TscAI CASTG 1 cut(s) 524
TspDTI ATGAA 2 cut(s) 408, 560
TspRI CASTG 1 cut(s) 524
VpaK11BI GGWCC 1 cut(s) 246
XapI RAATTY 4 cut(s) 174, 283, 396, 477
XhoI CTCGAG 1 cut(s) 428
XmaJI CCTAGG 1 cut(s) 64
XmnI GAANNNNTTC 1 cut(s) 90
XspI CTAG 3 cut(s) 65, 152, 527
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.