Prupe.2G047400_v2.0.a1

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0000107
Physical Location & Seq
Forward (+)
5472365 .. 5475126
2762 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G047400.1

Sequence Viewer

Length: 1890 bp
ATGATTAGATGTTCAAGGTGCAGAGAAAAGCTGAGTATTTCGTCAGAGATGACAATTTCTTTCTTCATCCTGTTGTTCATGGTAGGCTTCAAAGTTAATACTGGAGCATGCCAAAATGAGTGCTCAGAATTACGCTGTGGAGACATACCTATCAAATTCCCTTTTCGACTCAAAGACAAGCAGCCTGATCACTGTGGCTACCCCGGATTTGATTTATCCTGCAATGGAAGCAACAATATGGTGCTTGAGCTGCCAATTTCAGTGAAGTTCATCGTCACTGATATCAACTACAAATCTCAGGTAATTCAAGTGGTTGATCCAGATGGTTGTGTTCCCAGGCAGCTTCATAAACTTAATCTGTCTGCCTCTGCCTTCCAATTCAAAGACGAAGGGAACTACTATACTTTATTCAATTGTTCACCAGCAGATAGAAATTTATTGACGAAGCCACCAATTTTTTACTATCAAATTCCCTGCCTTAGTGAGACTAGCCACCAAATGTTGGCTATATTTTCAGATTCTTCCATTGACGAAGCTCCCATTTCTTCTTGTACCAAACTGTATAACCTTCCAAGTGTTCCATATGGTATATTATTCGAGTCAGAGCATGTTAGTTTGGAATGGTTCAAACCAGCATGTAAACAATGTGAGAAGAAAGGTAGAAAATGTAGACTGAAGAACAACAATCACACTGAATCAGAAACGGAGTGCTTCAAAGTGGACAAACAAGGTGCCTCAACAAAGCTAGTGGTTATAGATAGAGGTTCGTGGCCGAATATACAATCTGTAGGTGTGATCCTGGGTTCATTTTCATTTGTGGTTGCCCTTGTTTCTCTCCATCGGCTGTACACTTCTGACAGACAACAAACCATGATTGAAGAATTTTTGGAAAATTACAGAGCTCTCAAGCCCACAAGGTACTCTTATGCTGATATAAAGAGGATCACCAATACGTTTAGAGACAAGCTGGGACAGGGGACCTTTGGAACAGTGTACAAAGGAAAGCTTTCCAATGAGATCTTTGTTGCTGTAAAGATCCTCAACAATTCCAAAGGAAATGGGGAAGAGTTTATCAATGAAGTGGGAACATTGGGTCGAATCCACTACGTCAACGTGGTTCGATTGGTTGGCTATTGTGCTGATGGATTTAGACGAGCTTTGGTTTATGAATTTGCACCAAACGGTTCACTGCAGAATTTTATAACATCAGCAGACAGCAACAACCATTTCCTTGGTTGGGAGAAGCTGCAATATATTGCTCTCAGCGTAGCCAAAGGAATTGAGTACCTTCACAACGGATGTGACCAACGAATCCTTCATTTTGATATCAAACCTCACAATGTTCTTTTGGATGAAAACTTCAATCCAAAAATCTCTGATTTTGGTCTTTCCAAGTTGTGCGCCAACGATCAAAGTGCAGTTTCCTTAACAACTGCTAGGGGCACCATGGGTTACATCGCACCTGAAGTCTTCTCTAGGAACTTTGGTAACGTGTCCTACAAGTCAGATGTGTACAGTTTTGGAATGTTGTTACTTGAAATGGTTGGAGGCAGGAAAAATGTTCACGTCACAGAGGCAAACAGCAGCCAAGTTTACTTCCCCGAATGGATCTATAATCTTCTAGATCAAGGAGAAGACATCCGCATCCACGTTGAGCAAGAGATTGATGCTAAAATCGCAAAGAAACTCGCAATTGTGGGGCTATGGTGCATCCAGTGGTACCCGGTAGATCGTCCTTCCATGAAAGCTGTAGTTCAAATGTTGGAAGGAGAAGACAATGTAAGAATGCCTCCTAATCCTTTCTCATCGACTGCTTCAACAAGAGACAATGTTACAATGCCTGCAAAACGCCCCCGCCAAGAGTTACCTGTAATATTCGAATTAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase Pkinase_Tyr

Protein Analysis

630

Amino Acids

71.19

Weight (kDa)

7.46

Isoelectric Point (pI)

33.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1202
Acc65I GGTACC 1 cut(s) 1719
AccB1I GGYRCC 3 cut(s) 731, 1442, 1719
AccB7I CCANNNNNTGG 1 cut(s) 502
AccI GTMKAC 1 cut(s) 670
AciI CCGC 2 cut(s) 1642, 1855
AclWI GGATC 5 cut(s) 311, 790, 950, 1030, 1616
AcoI YGGCCR 1 cut(s) 770
AcsI RAATTY 6 cut(s) 155, 433, 468, 881, 1169, 1195
AcuI CTGAAG 2 cut(s) 695, 1485
AfaI GTAC 7 cut(s) 553, 848, 920, 995, 1286, 1514, 1721
AfiI CCNNNNNNNGG 2 cut(s) 502, 1237
AflIII ACRYGT 1 cut(s) 1491
AjiI CACGTC 1 cut(s) 1567
AjnI CCWGG 2 cut(s) 335, 798
AjuI GAANNNNNNNTTGG 2 cut(s) 1299, 1331
Alw21I GWGCWC 2 cut(s) 125, 904
Alw26I GTCTC 4 cut(s) 135, 479, 954, 1818
AlwI GGATC 5 cut(s) 311, 790, 950, 1030, 1616
AoxI GGCC 1 cut(s) 770
ApeKI GCWGC 5 cut(s) 181, 250, 340, 1246, 1584
ApoI RAATTY 6 cut(s) 155, 433, 468, 881, 1169, 1195
Asp700I GAANNNNTTC 1 cut(s) 1006
Asp718I GGTACC 1 cut(s) 1719
AspLEI GCGC 1 cut(s) 1403
AspS9I GGNCC 1 cut(s) 978
AsuC2I CCSGG 2 cut(s) 204, 1724
AsuHPI GGTGA 2 cut(s) 411, 937
AsuII TTCGAA 1 cut(s) 1878
AvaII GGWCC 1 cut(s) 978
BaeGI GKGCMC 1 cut(s) 1445
BanI GGYRCC 3 cut(s) 731, 1442, 1719
BanII GRGCYC 1 cut(s) 904
BbsI GAAGAC 3 cut(s) 1462, 1641, 1779
Bbv12I GWGCWC 2 cut(s) 125, 904
BbvI GCAGC 5 cut(s) 193, 237, 352, 1233, 1596
BccI CCATC 3 cut(s) 317, 846, 1136
BcgI CGANNNNNNTGC 2 cut(s) 1397, 1431
BciT130I CCWGG 2 cut(s) 337, 800
BclI TGATCA 1 cut(s) 187
BcnI CCSGG 2 cut(s) 204, 1724
BcoDI GTCTC 4 cut(s) 135, 479, 954, 1818
BfaI CTAG 5 cut(s) 489, 746, 1437, 1476, 1622
BfmI CTRYAG 3 cut(s) 786, 1190, 1749
BglII AGATCT 1 cut(s) 1017
BisI GCNGC 5 cut(s) 182, 251, 341, 1247, 1585
BlsI GCNGC 5 cut(s) 183, 252, 342, 1248, 1586
Bme1390I CCNGG 4 cut(s) 204, 337, 800, 1724
Bme18I GGWCC 1 cut(s) 978
BmgBI CACGTC 1 cut(s) 1567
BmgT120I GGNCC 1 cut(s) 978
BmiI GGNNCC 4 cut(s) 733, 979, 1444, 1721
BmrFI CCNGG 4 cut(s) 204, 337, 800, 1724
BmsI GCATC 3 cut(s) 1653, 1657, 1719
BpiI GAAGAC 3 cut(s) 1462, 1641, 1779
BpmI CTGGAG 1 cut(s) 123
Bpu14I TTCGAA 1 cut(s) 1878
BpuEI CTTGAG 2 cut(s) 266, 890
BpuMI CCSGG 2 cut(s) 204, 1724
BsaJI CCNNGG 5 cut(s) 202, 335, 799, 1231, 1446
Bsc4I CCNNNNNNNGG 2 cut(s) 502, 1237
Bse1I ACTGG 2 cut(s) 106, 1714
Bse3DI GCAATG 1 cut(s) 229
BseBI CCWGG 2 cut(s) 337, 800
BseDI CCNNGG 5 cut(s) 202, 335, 799, 1231, 1446
BseGI GGATG 6 cut(s) 66, 1304, 1357, 1638, 1644, 1710
BseLI CCNNNNNNNGG 2 cut(s) 502, 1237
BseMI GCAATG 1 cut(s) 229
BseMII CTCAG 4 cut(s) 23, 138, 311, 1276
BseNI ACTGG 2 cut(s) 106, 1714
BseSI GKGCMC 1 cut(s) 1445
BseXI GCAGC 5 cut(s) 193, 237, 352, 1233, 1596
BseYI CCCAGC 1 cut(s) 967
BsgI GTGCAG 2 cut(s) 40, 1437
BshFI GGCC 1 cut(s) 772
BshNI GGYRCC 3 cut(s) 731, 1442, 1719
BsiHKAI GWGCWC 2 cut(s) 125, 904
BsiSI CCGG 2 cut(s) 204, 1724
BslFI GGGAC 2 cut(s) 984, 991
BslI CCNNNNNNNGG 2 cut(s) 502, 1237
BsmAI GTCTC 4 cut(s) 135, 479, 954, 1818
BsmFI GGGAC 2 cut(s) 984, 991
BsmI GAATGC 1 cut(s) 1791
BsnI GGCC 1 cut(s) 772
Bsp119I TTCGAA 1 cut(s) 1878
Bsp1286I GDGCHC 3 cut(s) 125, 904, 1445
Bsp1407I TGTACA 3 cut(s) 846, 993, 1512
Bsp19I CCATGG 1 cut(s) 1446
BspACI CCGC 2 cut(s) 1642, 1855
BspANI GGCC 1 cut(s) 772
BspCNI CTCAG 4 cut(s) 24, 137, 310, 1275
BspLI GGNNCC 4 cut(s) 733, 979, 1444, 1721
BspMAI CTGCAG 1 cut(s) 1194
BspPI GGATC 5 cut(s) 311, 790, 950, 1030, 1616
BspT104I TTCGAA 1 cut(s) 1878
BspT107I GGYRCC 3 cut(s) 731, 1442, 1719
BsrDI GCAATG 1 cut(s) 229
BsrGI TGTACA 3 cut(s) 846, 993, 1512
BsrI ACTGG 2 cut(s) 106, 1714
BssECI CCNNGG 5 cut(s) 202, 335, 799, 1231, 1446
BssT1I CCWWGG 2 cut(s) 1231, 1446
Bst2UI CCWGG 2 cut(s) 337, 800
Bst4CI ACNGT 5 cut(s) 194, 561, 991, 1184, 1517
Bst6I CTCTTC 1 cut(s) 1059
BstAUI TGTACA 3 cut(s) 846, 993, 1512
BstBI TTCGAA 1 cut(s) 1878
BstC8I GCNNGC 2 cut(s) 109, 1842
BstDEI CTNAG 5 cut(s) 32, 124, 297, 479, 1262
BstDSI CCRYGG 1 cut(s) 1446
BstF5I GGATG 6 cut(s) 66, 1304, 1357, 1638, 1644, 1710
BstHHI GCGC 1 cut(s) 1403
BstMAI GTCTC 4 cut(s) 135, 479, 954, 1818
BstMWI GCNNNNNNNGC 3 cut(s) 228, 250, 1676
BstNI CCWGG 2 cut(s) 337, 800
BstNSI RCATGY 3 cut(s) 111, 611, 639
BstSCI CCNGG 4 cut(s) 202, 335, 798, 1722
BstSFI CTRYAG 3 cut(s) 786, 1190, 1749
BstSLI GKGCMC 1 cut(s) 1445
BstV1I GCAGC 5 cut(s) 193, 237, 352, 1233, 1596
BstV2I GAAGAC 3 cut(s) 1462, 1641, 1779
BstX2I RGATCY 3 cut(s) 1017, 1035, 1608
BstXI CCANNNNNNTGG 1 cut(s) 1232
BstYI RGATCY 3 cut(s) 1017, 1035, 1608
BsuRI GGCC 1 cut(s) 772
BtgI CCRYGG 1 cut(s) 1446
BtgZI GCGATG 1 cut(s) 1441
BtrI CACGTC 1 cut(s) 1567
BtsCI GGATG 6 cut(s) 66, 1304, 1357, 1638, 1644, 1710
BtsI GCAGTG 1 cut(s) 1187
BtsIMutI CAGTG 7 cut(s) 190, 267, 276, 690, 996, 1187, 1721
Cac8I GCNNGC 2 cut(s) 109, 1842
CfoI GCGC 1 cut(s) 1403
Cfr13I GGNCC 1 cut(s) 978
Csp6I GTAC 7 cut(s) 552, 847, 919, 994, 1285, 1513, 1720
CspCI CAANNNNNGTGG 2 cut(s) 729, 764
CviAII CATG 7 cut(s) 79, 108, 608, 636, 871, 1447, 1741
CviQI GTAC 7 cut(s) 552, 847, 919, 994, 1285, 1513, 1720
DdeI CTNAG 5 cut(s) 32, 124, 297, 479, 1262
EaeI YGGCCR 1 cut(s) 770
Eam1104I CTCTTC 1 cut(s) 1059
EarI CTCTTC 1 cut(s) 1059
Ecl136II GAGCTC 1 cut(s) 902
Eco130I CCWWGG 2 cut(s) 1231, 1446
Eco24I GRGCYC 1 cut(s) 904
Eco32I GATATC 2 cut(s) 283, 1327
Eco47I GGWCC 1 cut(s) 978
Eco53kI GAGCTC 1 cut(s) 902
Eco57I CTGAAG 2 cut(s) 695, 1485
EcoICRI GAGCTC 1 cut(s) 902
EcoO109I RGGNCCY 1 cut(s) 978
EcoRII CCWGG 2 cut(s) 335, 798
EcoRV GATATC 2 cut(s) 283, 1327
EcoT14I CCWWGG 2 cut(s) 1231, 1446
EcoT38I GRGCYC 1 cut(s) 904
ErhI CCWWGG 2 cut(s) 1231, 1446
FaeI CATG 7 cut(s) 82, 111, 611, 639, 874, 1450, 1744
FalI AAGNNNNNCTT 4 cut(s) 907, 939, 990, 1022
FaqI GGGAC 2 cut(s) 984, 991
FatI CATG 7 cut(s) 78, 107, 607, 635, 870, 1446, 1740
FauI CCCGC 1 cut(s) 1862
FauNDI CATATG 1 cut(s) 583
FbaI TGATCA 1 cut(s) 187
FblI GTMKAC 1 cut(s) 670
Fnu4HI GCNGC 5 cut(s) 182, 251, 341, 1247, 1585
FokI GGATG 6 cut(s) 53, 1311, 1364, 1625, 1631, 1697
FriOI GRGCYC 1 cut(s) 904
Fsp4HI GCNGC 5 cut(s) 182, 251, 341, 1247, 1585
FspBI CTAG 5 cut(s) 489, 746, 1437, 1476, 1622
GlaI GCGC 1 cut(s) 1402
GluI GCNGC 5 cut(s) 182, 251, 341, 1247, 1585
GsaI CCCAGC 1 cut(s) 971
GsuI CTGGAG 1 cut(s) 123
HaeIII GGCC 1 cut(s) 772
HapII CCGG 2 cut(s) 204, 1724
HhaI GCGC 1 cut(s) 1403
Hin1II CATG 7 cut(s) 82, 111, 611, 639, 874, 1450, 1744
Hin6I GCGC 1 cut(s) 1401
HinP1I GCGC 1 cut(s) 1401
HincII GTYRAC 1 cut(s) 1111
HindII GTYRAC 1 cut(s) 1111
HindIII AAGCTT 1 cut(s) 1004
HinfI GANTC 6 cut(s) 168, 518, 599, 695, 1098, 1311
HpaII CCGG 2 cut(s) 204, 1724
HphI GGTGA 2 cut(s) 411, 937
Hpy188I TCNGA 8 cut(s) 46, 127, 517, 604, 700, 856, 1378, 1507
Hpy188III TCNNGA 2 cut(s) 320, 1622
HpyAV CCTTC 7 cut(s) 382, 383, 578, 1298, 1325, 1746, 1760
HpyCH4III ACNGT 5 cut(s) 194, 561, 991, 1184, 1517
HpyCH4IV ACGT 6 cut(s) 953, 1107, 1113, 1491, 1566, 1650
HpyCH4V TGCA 8 cut(s) 21, 222, 1175, 1192, 1249, 1418, 1710, 1844
HpyF10VI GCNNNNNNNGC 3 cut(s) 228, 250, 1676
HpyF3I CTNAG 5 cut(s) 32, 124, 297, 479, 1262
HpySE526I ACGT 6 cut(s) 953, 1107, 1113, 1491, 1566, 1650
Hsp92II CATG 7 cut(s) 82, 111, 611, 639, 874, 1450, 1744
HspAI GCGC 1 cut(s) 1401
KpnI GGTACC 1 cut(s) 1723
Ksp22I TGATCA 1 cut(s) 187
LmnI GCTCC 2 cut(s) 104, 541
Lsp1109I GCAGC 5 cut(s) 193, 237, 352, 1233, 1596
LweI GCATC 3 cut(s) 1653, 1657, 1719
MaeI CTAG 5 cut(s) 489, 746, 1437, 1476, 1622
MaeII ACGT 6 cut(s) 953, 1107, 1113, 1491, 1566, 1650
MaeIII GTNAC 8 cut(s) 274, 1301, 1451, 1487, 1530, 1567, 1831, 1863
MfeI CAATTG 2 cut(s) 412, 1692
MflI RGATCY 3 cut(s) 1017, 1035, 1608
MhlI GDGCHC 3 cut(s) 125, 904, 1445
MlyI GAGTC 2 cut(s) 162, 608
MmeI TCCRAC 2 cut(s) 1525, 1743
MnlI CCTC 9 cut(s) 376, 745, 755, 933, 1049, 1344, 1541, 1567, 1800
MroXI GAANNNNTTC 1 cut(s) 1006
MseI TTAA 3 cut(s) 96, 354, 1427
MspI CCGG 2 cut(s) 204, 1724
MspR9I CCNGG 4 cut(s) 204, 337, 800, 1724
MunI CAATTG 2 cut(s) 412, 1692
Mva1269I GAATGC 1 cut(s) 1791
MvaI CCWGG 2 cut(s) 337, 800
MwoI GCNNNNNNNGC 3 cut(s) 228, 250, 1676
NciI CCSGG 2 cut(s) 204, 1724
NcoI CCATGG 1 cut(s) 1446
NdeI CATATG 1 cut(s) 583
NlaIII CATG 7 cut(s) 82, 111, 611, 639, 874, 1450, 1744
NlaIV GGNNCC 4 cut(s) 733, 979, 1444, 1721
NmuCI GTSAC 3 cut(s) 274, 1301, 1567
NspI RCATGY 3 cut(s) 111, 611, 639
NspV TTCGAA 1 cut(s) 1878
PaeI GCATGC 1 cut(s) 111
PctI GAATGC 1 cut(s) 1791
PdmI GAANNNNTTC 1 cut(s) 1006
PfeI GAWTC 4 cut(s) 518, 695, 1098, 1311
PflMI CCANNNNNTGG 1 cut(s) 502
PkrI GCNGC 5 cut(s) 183, 252, 342, 1248, 1586
PleI GAGTC 2 cut(s) 162, 607
PpsI GAGTC 2 cut(s) 162, 607
PpuMI RGGWCCY 1 cut(s) 978
PsiI TTATAA 1 cut(s) 1202
Psp124BI GAGCTC 1 cut(s) 904
Psp5II RGGWCCY 1 cut(s) 978
Psp6I CCWGG 2 cut(s) 335, 798
PspFI CCCAGC 1 cut(s) 967
PspGI CCWGG 2 cut(s) 335, 798
PspN4I GGNNCC 4 cut(s) 733, 979, 1444, 1721
PspPI GGNCC 1 cut(s) 978
PspPPI RGGWCCY 1 cut(s) 978
PstI CTGCAG 1 cut(s) 1194
PsuI RGATCY 3 cut(s) 1017, 1035, 1608
RsaI GTAC 7 cut(s) 553, 848, 920, 995, 1286, 1514, 1721
RsaNI GTAC 7 cut(s) 552, 847, 919, 994, 1285, 1513, 1720
SacI GAGCTC 1 cut(s) 904
SaqAI TTAA 3 cut(s) 96, 354, 1427
SatI GCNGC 5 cut(s) 182, 251, 341, 1247, 1585
Sau96I GGNCC 1 cut(s) 978
SchI GAGTC 2 cut(s) 162, 608
ScrFI CCNGG 4 cut(s) 204, 337, 800, 1724
SduI GDGCHC 3 cut(s) 125, 904, 1445
SfaNI GCATC 3 cut(s) 1653, 1657, 1719
SfcI CTRYAG 3 cut(s) 786, 1190, 1749
SfuI TTCGAA 1 cut(s) 1878
SinI GGWCC 1 cut(s) 978
SmlI CTYRAG 2 cut(s) 245, 905
SmoI CTYRAG 2 cut(s) 245, 905
SphI GCATGC 1 cut(s) 111
SsiI CCGC 2 cut(s) 1642, 1855
SspI AATATT 1 cut(s) 1875
SspMI CTAG 5 cut(s) 489, 746, 1437, 1476, 1622
SstI GAGCTC 1 cut(s) 904
StyD4I CCNGG 4 cut(s) 202, 335, 798, 1722
StyI CCWWGG 2 cut(s) 1231, 1446
TaaI ACNGT 5 cut(s) 194, 561, 991, 1184, 1517
TaiI ACGT 6 cut(s) 956, 1110, 1116, 1494, 1569, 1653
TaqI TCGA 6 cut(s) 166, 597, 1096, 1120, 1808, 1878
TatI WGTACW 3 cut(s) 846, 993, 1512
TfiI GAWTC 4 cut(s) 518, 695, 1098, 1311
Tru1I TTAA 3 cut(s) 96, 354, 1427
Tru9I TTAA 3 cut(s) 96, 354, 1427
TscAI CASTG 7 cut(s) 197, 267, 283, 697, 996, 1194, 1721
TseFI GTSAC 3 cut(s) 274, 1301, 1567
TseI GCWGC 5 cut(s) 181, 250, 340, 1246, 1584
Tsp45I GTSAC 3 cut(s) 274, 1301, 1567
TspGWI ACGGA 2 cut(s) 719, 1311
TspRI CASTG 7 cut(s) 197, 267, 283, 697, 996, 1194, 1721
Van91I CCANNNNNTGG 1 cut(s) 502
VpaK11BI GGWCC 1 cut(s) 978
XapI RAATTY 6 cut(s) 155, 433, 468, 881, 1169, 1195
XbaI TCTAGA 1 cut(s) 1621
XceI RCATGY 3 cut(s) 111, 611, 639
XmiI GTMKAC 1 cut(s) 670
XmnI GAANNNNTTC 1 cut(s) 1006
XspI CTAG 5 cut(s) 489, 746, 1437, 1476, 1622
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.