Rh6DG261200

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0000107
Physical Location & Seq
Reverse (-)
45261792 .. 45265225
3434 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG261200.1

Sequence Viewer

Length: 1761 bp
ATGCAGCAAATATTCATATCTTCCTTTTGCTTATTCTCATTAATAATGACTTTCTTCAAAGTAACTGTAGCGTGTACAGAATTCAGCTGTGGGTATAATGGCCTGGCTATTCATCTCCCATTCCGCAGGGGAGATGATGAGCACCGAATTGTTCTAGGAAAATTCCTTGTCAAACACATAGATTATATCCGTCAGGAAATCCAACTAAGTACCCCAGACTGCCTTCTACTAACTTCTTTAGACAACTCCTACATGGACTTGCCAAGCTCTCCGTTCTACGCAGACGAAACTGTTAACCTTACCCTATTCCGTTGTCCTGTTCAAAGAGTTGTAGATAATGCAAGACTAGTCCCCTGCCTTGGTAACTACGCAGCTTATGCCGTTGAATCTTTCACATCCCCTGGGGATTACCCTGCCCTAGAGTCGTGTACAAAGATGTATGATTTATCACTTCTACACGGCAATGACTACACAGCTTCCTCAGAGCCTCGTCTTAGATGGTATAAACCAAACTGTTCAGAGTGCAAAGCAATGGGAAACAAGTGTAGATTGAAGAACAATGGCATTCAAAGTGAAATTGAATGCGTTCACCCCAGGAAACCAAGTGCAACACCGAAATTAGTCGCATCAGGTTCGACTCTGGGTTCATTTCTTATCCTACTGCTGGCGTTTAAAGCCTATCGTTTCTATACATGGGATAGAAATGAAAAGGAACATCAATTGAAAGTTGAAAAGTTTCTAGAGGATTACAAAACTTTGAAACCAAGTAGATATTCTTATGCAGATATTAAGAGAATTACAAATGAATTCAGGGACATGTTGGGTGAAGGAGCCTATGGAACTGTCTTTAAAGGAAATCTTTCCACTGAATTTTTTGTGGCTGTCAAAGTCCTCAACAATTCTAAAGGAAATGGAGAAGAATTCATCAATGAAGTTGGAGCAATGGGTCGTATCCACCATGTTAACGTGGTTCGCTTGGTTGGCTTTTGCGCCGATGGGTTTAAAAGAGCTCTTGTTTATGAGTACTTCCCCAATGGTTCCCTACAAGATTTCATTTCATCAGCAGATAACAAGAACAATTTTCTTGGTTGGGATAAGCTGCAAAATATTTCTCTGGGAATAGCCAAAGGAATTGAATATCTCCATGAAGGATGCGATCAAAGAATCCTCCATTTTGATATCAAACCTCGTAATGTTTTGTTAGACCAGAACTTCACTCCCAAAATTTCTGATTTTGGTCTGGCCAAGTTATGTTCTAAGGATCAAAGTATTGTGTCAATGACTACAGCTAGGGGCACAATGGGCTACATTGCACCTGAAGTATTTTCGAGGAATTTTGGAAATGTGTCTTACAAGTCAGATGTCTATGGTTTCGGAATGTTGTTGTTGGAGATCGTAGGAGGGAGGAAGAATATTGGTCCAACCATGGACGACAACGCTAGTGATGTTTATTACCCAGAGTGGATCTATAATCTTCTAGAAGAAGGAGAAGACCTACGAGTACGTATTGGGGAAGAAGGATCAGGTGCTGGAATTGCAAAGCAACTAGCAATTGTAGGGCTTTGGTGCATTCAATGGCACCCGGTGGATCGTCCATCCATGAAAGTAGTAGTTCAAATGTTAGAAGGAAGAGAGAACTTAACCATGCCGCCTAATCCTTTTGGCTCTACAAATTCTACGAGAACAAATGCAAGTCTGCCAGCCTTAAGACGCTTGAACCTCGAGTTAGATGCAATTGTTGAATTGGAGTTAGACGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase

Protein Analysis

586

Amino Acids

66.03

Weight (kDa)

6.18

Isoelectric Point (pI)

38.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 270 - 539 5.9e-44 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 272 - 539 1.8e-43 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1578
AciI CCGC 2 cut(s) 124, 1649
AclWI GGATC 4 cut(s) 1269, 1472, 1528, 1596
AcoI YGGCCR 1 cut(s) 1242
AcsI RAATTY 8 cut(s) 80, 161, 806, 869, 920, 1224, 1333, 1672
AcuI CTGAAG 1 cut(s) 1338
AdeI CACNNNGTG 1 cut(s) 1585
AfaI GTAC 5 cut(s) 76, 211, 430, 1025, 1503
AfiI CCNNNNNNNGG 2 cut(s) 359, 664
AflII CTTAAG 1 cut(s) 1705
AflIII ACRYGT 1 cut(s) 816
AhlI ACTAGT 1 cut(s) 346
AjnI CCWGG 3 cut(s) 102, 400, 593
AjuI GAANNNNNNNTTGG 2 cut(s) 757, 789
AluBI AGCT 7 cut(s) 87, 267, 374, 476, 1010, 1099, 1289
AluI AGCT 7 cut(s) 87, 267, 374, 476, 1010, 1099, 1289
Alw21I GWGCWC 2 cut(s) 144, 1012
AlwI GGATC 4 cut(s) 1269, 1472, 1528, 1596
AlwNI CAGNNNCTG 1 cut(s) 1529
Ama87I CYCGRG 1 cut(s) 1721
AoxI GGCC 2 cut(s) 100, 1242
ApeKI GCWGC 3 cut(s) 4, 371, 1099
ApoI RAATTY 8 cut(s) 80, 161, 806, 869, 920, 1224, 1333, 1672
AseI ATTAAT 1 cut(s) 41
Asp700I GAANNNNTTC 3 cut(s) 585, 735, 859
AspLEI GCGC 1 cut(s) 992
AspS9I GGNCC 1 cut(s) 1418
AsuC2I CCSGG 1 cut(s) 1583
AsuHPI GGTGA 2 cut(s) 581, 836
AvaI CYCGRG 1 cut(s) 1721
AvaII GGWCC 1 cut(s) 1418
BaeGI GKGCMC 1 cut(s) 1298
BalI TGGCCA 1 cut(s) 1244
BanI GGYRCC 1 cut(s) 1578
BanII GRGCYC 1 cut(s) 1012
BbsI GAAGAC 1 cut(s) 1497
Bbv12I GWGCWC 2 cut(s) 144, 1012
BbvI GCAGC 3 cut(s) 16, 383, 1086
BccI CCATC 3 cut(s) 492, 989, 1603
BceAI ACGGC 2 cut(s) 365, 475
BcgI CGANNNNNNTGC 4 cut(s) 615, 649, 1712, 1746
BciT130I CCWGG 3 cut(s) 104, 402, 595
BciVI GTATCC 1 cut(s) 962
BcnI CCSGG 1 cut(s) 1583
BcuI ACTAGT 1 cut(s) 346
BfaI CTAG 8 cut(s) 155, 347, 419, 740, 1290, 1440, 1478, 1547
BfmI CTRYAG 2 cut(s) 66, 1284
BfrI CTTAAG 1 cut(s) 1705
BfuI GTATCC 1 cut(s) 962
BisI GCNGC 4 cut(s) 5, 372, 1100, 1649
BlsI GCNGC 4 cut(s) 6, 373, 1101, 1650
BmcAI AGTACT 1 cut(s) 1025
Bme1390I CCNGG 4 cut(s) 104, 402, 595, 1583
Bme18I GGWCC 1 cut(s) 1418
BmeT110I CYCGRG 1 cut(s) 1721
BmgT120I GGNCC 1 cut(s) 1418
BmiI GGNNCC 3 cut(s) 832, 1039, 1580
BmrFI CCNGG 4 cut(s) 104, 402, 595, 1583
BmsI GCATC 3 cut(s) 635, 1142, 1720
BpiI GAAGAC 1 cut(s) 1497
BpuMI CCSGG 1 cut(s) 1583
BsaAI YACGTR 1 cut(s) 1505
BsaJI CCNNGG 5 cut(s) 358, 400, 401, 593, 1425
Bsc4I CCNNNNNNNGG 2 cut(s) 359, 664
Bse3DI GCAATG 4 cut(s) 469, 537, 948, 1308
BseBI CCWGG 3 cut(s) 104, 402, 595
BseDI CCNNGG 5 cut(s) 358, 400, 401, 593, 1425
BseGI GGATG 3 cut(s) 395, 1157, 1595
BseLI CCNNNNNNNGG 2 cut(s) 359, 664
BseMI GCAATG 4 cut(s) 469, 537, 948, 1308
BseMII CTCAG 1 cut(s) 495
BseSI GKGCMC 1 cut(s) 1298
BseXI GCAGC 3 cut(s) 16, 383, 1086
BshFI GGCC 2 cut(s) 102, 1244
BshNI GGYRCC 1 cut(s) 1578
BsiHKAI GWGCWC 2 cut(s) 144, 1012
BsiHKCI CYCGRG 1 cut(s) 1721
BsiSI CCGG 1 cut(s) 1583
BslFI GGGAC 2 cut(s) 335, 827
BslI CCNNNNNNNGG 2 cut(s) 359, 664
BsmFI GGGAC 2 cut(s) 335, 827
BsmI GAATGC 3 cut(s) 564, 587, 1569
BsnI GGCC 2 cut(s) 102, 1244
BsoBI CYCGRG 1 cut(s) 1721
Bsp1286I GDGCHC 3 cut(s) 144, 1012, 1298
Bsp1407I TGTACA 2 cut(s) 74, 428
Bsp143I GATC 6 cut(s) 1156, 1261, 1392, 1464, 1520, 1588
Bsp19I CCATGG 1 cut(s) 1425
BspACI CCGC 2 cut(s) 124, 1649
BspANI GGCC 2 cut(s) 102, 1244
BspCNI CTCAG 1 cut(s) 494
BspLI GGNNCC 3 cut(s) 832, 1039, 1580
BspPI GGATC 4 cut(s) 1269, 1472, 1528, 1596
BspT107I GGYRCC 1 cut(s) 1578
BspTI CTTAAG 1 cut(s) 1705
BsrDI GCAATG 4 cut(s) 469, 537, 948, 1308
BsrGI TGTACA 2 cut(s) 74, 428
BssECI CCNNGG 5 cut(s) 358, 400, 401, 593, 1425
BssMI GATC 6 cut(s) 1156, 1261, 1392, 1464, 1520, 1588
BssT1I CCWWGG 2 cut(s) 358, 1425
Bst2UI CCWGG 3 cut(s) 104, 402, 595
Bst4CI ACNGT 4 cut(s) 67, 292, 515, 844
Bst6I CTCTTC 1 cut(s) 1624
BstAFI CTTAAG 1 cut(s) 1705
BstAPI GCANNNNNTGC 1 cut(s) 377
BstAUI TGTACA 2 cut(s) 74, 428
BstBAI YACGTR 1 cut(s) 1505
BstC8I GCNNGC 2 cut(s) 666, 1701
BstDEI CTNAG 4 cut(s) 206, 481, 494, 1257
BstDSI CCRYGG 1 cut(s) 1425
BstF5I GGATG 3 cut(s) 395, 1157, 1595
BstHHI GCGC 1 cut(s) 992
BstKTI GATC 6 cut(s) 1159, 1264, 1395, 1467, 1523, 1591
BstMBI GATC 6 cut(s) 1156, 1261, 1392, 1464, 1520, 1588
BstMWI GCNNNNNNNGC 5 cut(s) 377, 674, 981, 1302, 1535
BstNI CCWGG 3 cut(s) 104, 402, 595
BstNSI RCATGY 1 cut(s) 820
BstSCI CCNGG 4 cut(s) 102, 400, 593, 1581
BstSFI CTRYAG 2 cut(s) 66, 1284
BstSLI GKGCMC 1 cut(s) 1298
BstSNI TACGTA 1 cut(s) 1505
BstV1I GCAGC 3 cut(s) 16, 383, 1086
BstV2I GAAGAC 1 cut(s) 1497
BstX2I RGATCY 1 cut(s) 1464
BstYI RGATCY 1 cut(s) 1464
BsuI GTATCC 1 cut(s) 962
BsuRI GGCC 2 cut(s) 102, 1244
BtgI CCRYGG 1 cut(s) 1425
BtsCI GGATG 3 cut(s) 395, 1157, 1595
BtsIMutI CAGTG 1 cut(s) 864
Cac8I GCNNGC 2 cut(s) 666, 1701
CaiI CAGNNNCTG 1 cut(s) 1529
CfoI GCGC 1 cut(s) 992
Cfr13I GGNCC 1 cut(s) 1418
CseI GACGC 1 cut(s) 1719
Csp6I GTAC 5 cut(s) 75, 210, 429, 1024, 1502
CviAII CATG 8 cut(s) 253, 693, 817, 959, 1145, 1426, 1600, 1645
CviQI GTAC 5 cut(s) 75, 210, 429, 1024, 1502
DdeI CTNAG 4 cut(s) 206, 481, 494, 1257
DpnI GATC 6 cut(s) 1158, 1263, 1394, 1466, 1522, 1590
DpnII GATC 6 cut(s) 1156, 1261, 1392, 1464, 1520, 1588
DraI TTTAAA 3 cut(s) 673, 850, 1003
DraIII CACNNNGTG 1 cut(s) 1585
EaeI YGGCCR 1 cut(s) 1242
Eam1104I CTCTTC 1 cut(s) 1624
EarI CTCTTC 1 cut(s) 1624
Ecl136II GAGCTC 1 cut(s) 1010
Eco105I TACGTA 1 cut(s) 1505
Eco130I CCWWGG 2 cut(s) 358, 1425
Eco24I GRGCYC 1 cut(s) 1012
Eco32I GATATC 1 cut(s) 1180
Eco47I GGWCC 1 cut(s) 1418
Eco53kI GAGCTC 1 cut(s) 1010
Eco57I CTGAAG 1 cut(s) 1338
Eco88I CYCGRG 1 cut(s) 1721
EcoICRI GAGCTC 1 cut(s) 1010
EcoRI GAATTC 3 cut(s) 80, 806, 920
EcoRII CCWGG 3 cut(s) 102, 400, 593
EcoRV GATATC 1 cut(s) 1180
EcoT14I CCWWGG 2 cut(s) 358, 1425
EcoT38I GRGCYC 1 cut(s) 1012
ErhI CCWWGG 2 cut(s) 358, 1425
FaeI CATG 8 cut(s) 256, 696, 820, 962, 1148, 1429, 1603, 1648
FalI AAGNNNNNCTT 2 cut(s) 843, 875
FaqI GGGAC 2 cut(s) 335, 827
FatI CATG 8 cut(s) 252, 692, 816, 958, 1144, 1425, 1599, 1644
Fnu4HI GCNGC 4 cut(s) 5, 372, 1100, 1649
FokI GGATG 3 cut(s) 382, 1164, 1582
FriOI GRGCYC 1 cut(s) 1012
Fsp4HI GCNGC 4 cut(s) 5, 372, 1100, 1649
FspBI CTAG 8 cut(s) 155, 347, 419, 740, 1290, 1440, 1478, 1547
GlaI GCGC 1 cut(s) 991
GluI GCNGC 4 cut(s) 5, 372, 1100, 1649
HaeIII GGCC 2 cut(s) 102, 1244
HapII CCGG 1 cut(s) 1583
HgaI GACGC 1 cut(s) 1719
HhaI GCGC 1 cut(s) 992
Hin1II CATG 8 cut(s) 256, 696, 820, 962, 1148, 1429, 1603, 1648
Hin6I GCGC 1 cut(s) 990
HinP1I GCGC 1 cut(s) 990
HincII GTYRAC 2 cut(s) 295, 964
HindII GTYRAC 2 cut(s) 295, 964
HinfI GANTC 4 cut(s) 386, 422, 637, 1164
HpaI GTTAAC 2 cut(s) 295, 964
HpaII CCGG 1 cut(s) 1583
HphI GGTGA 2 cut(s) 581, 836
Hpy166II GTNNAC 5 cut(s) 75, 295, 429, 589, 964
Hpy188I TCNGA 5 cut(s) 484, 520, 1231, 1360, 1376
Hpy188III TCNNGA 3 cut(s) 194, 740, 1478
Hpy8I GTNNAC 5 cut(s) 75, 295, 429, 589, 964
HpyAV CCTTC 6 cut(s) 233, 821, 1142, 1478, 1511, 1619
HpyCH4III ACNGT 4 cut(s) 67, 292, 515, 844
HpyCH4IV ACGT 2 cut(s) 966, 1504
HpyF10VI GCNNNNNNNGC 5 cut(s) 377, 674, 981, 1302, 1535
HpyF3I CTNAG 4 cut(s) 206, 481, 494, 1257
HpySE526I ACGT 2 cut(s) 966, 1504
Hsp92II CATG 8 cut(s) 256, 696, 820, 962, 1148, 1429, 1603, 1648
HspAI GCGC 1 cut(s) 990
KspAI GTTAAC 2 cut(s) 295, 964
Kzo9I GATC 6 cut(s) 1156, 1261, 1392, 1464, 1520, 1588
LmnI GCTCC 2 cut(s) 830, 938
Lsp1109I GCAGC 3 cut(s) 16, 383, 1086
LweI GCATC 3 cut(s) 635, 1142, 1720
MaeI CTAG 8 cut(s) 155, 347, 419, 740, 1290, 1440, 1478, 1547
MaeII ACGT 2 cut(s) 966, 1504
MaeIII GTNAC 2 cut(s) 61, 362
MalI GATC 6 cut(s) 1158, 1263, 1394, 1466, 1522, 1590
MboI GATC 6 cut(s) 1156, 1261, 1392, 1464, 1520, 1588
MfeI CAATTG 3 cut(s) 719, 1551, 1734
MflI RGATCY 1 cut(s) 1464
MhlI GDGCHC 3 cut(s) 144, 1012, 1298
MlsI TGGCCA 1 cut(s) 1244
MluNI TGGCCA 1 cut(s) 1244
MlyI GAGTC 2 cut(s) 431, 631
MmeI TCCRAC 4 cut(s) 226, 916, 1368, 1445
Mox20I TGGCCA 1 cut(s) 1244
MroXI GAANNNNTTC 3 cut(s) 585, 735, 859
MscI TGGCCA 1 cut(s) 1244
MseI TTAA 9 cut(s) 41, 294, 672, 789, 849, 963, 1002, 1640, 1706
MslI CAYNNNNRTG 1 cut(s) 462
Msp20I TGGCCA 1 cut(s) 1244
MspA1I CMGCKG 1 cut(s) 87
MspCI CTTAAG 1 cut(s) 1705
MspI CCGG 1 cut(s) 1583
MspR9I CCNGG 4 cut(s) 104, 402, 595, 1583
MunI CAATTG 3 cut(s) 719, 1551, 1734
Mva1269I GAATGC 3 cut(s) 564, 587, 1569
MvaI CCWGG 3 cut(s) 104, 402, 595
MwoI GCNNNNNNNGC 5 cut(s) 377, 674, 981, 1302, 1535
NciI CCSGG 1 cut(s) 1583
NcoI CCATGG 1 cut(s) 1425
NdeII GATC 6 cut(s) 1156, 1261, 1392, 1464, 1520, 1588
NlaIII CATG 8 cut(s) 256, 696, 820, 962, 1148, 1429, 1603, 1648
NlaIV GGNNCC 3 cut(s) 832, 1039, 1580
NspI RCATGY 1 cut(s) 820
PaeR7I CTCGAG 1 cut(s) 1721
PasI CCCWGGG 1 cut(s) 401
PciI ACATGT 1 cut(s) 816
PctI GAATGC 3 cut(s) 564, 587, 1569
PdmI GAANNNNTTC 3 cut(s) 585, 735, 859
PfeI GAWTC 2 cut(s) 386, 1164
PkrI GCNGC 4 cut(s) 6, 373, 1101, 1650
PleI GAGTC 2 cut(s) 430, 631
PpsI GAGTC 2 cut(s) 430, 631
Ppu21I YACGTR 1 cut(s) 1505
PscI ACATGT 1 cut(s) 816
PshBI ATTAAT 1 cut(s) 41
Psp124BI GAGCTC 1 cut(s) 1012
Psp6I CCWGG 3 cut(s) 102, 400, 593
PspGI CCWGG 3 cut(s) 102, 400, 593
PspN4I GGNNCC 3 cut(s) 832, 1039, 1580
PspPI GGNCC 1 cut(s) 1418
PspXI VCTCGAGB 1 cut(s) 1721
PstNI CAGNNNCTG 1 cut(s) 1529
PsuI RGATCY 1 cut(s) 1464
PvuII CAGCTG 1 cut(s) 87
RsaI GTAC 5 cut(s) 76, 211, 430, 1025, 1503
RsaNI GTAC 5 cut(s) 75, 210, 429, 1024, 1502
RseI CAYNNNNRTG 1 cut(s) 462
SacI GAGCTC 1 cut(s) 1012
SaqAI TTAA 9 cut(s) 41, 294, 672, 789, 849, 963, 1002, 1640, 1706
SatI GCNGC 4 cut(s) 5, 372, 1100, 1649
Sau3AI GATC 6 cut(s) 1156, 1261, 1392, 1464, 1520, 1588
Sau96I GGNCC 1 cut(s) 1418
ScaI AGTACT 1 cut(s) 1025
SchI GAGTC 2 cut(s) 431, 631
ScrFI CCNGG 4 cut(s) 104, 402, 595, 1583
SduI GDGCHC 3 cut(s) 144, 1012, 1298
SfaNI GCATC 3 cut(s) 635, 1142, 1720
SfcI CTRYAG 2 cut(s) 66, 1284
Sfr274I CTCGAG 1 cut(s) 1721
SinI GGWCC 1 cut(s) 1418
SlaI CTCGAG 1 cut(s) 1721
SmiMI CAYNNNNRTG 1 cut(s) 462
SmlI CTYRAG 2 cut(s) 1705, 1721
SmoI CTYRAG 2 cut(s) 1705, 1721
SnaBI TACGTA 1 cut(s) 1505
SpeI ACTAGT 1 cut(s) 346
SsiI CCGC 2 cut(s) 124, 1649
SspI AATATT 3 cut(s) 12, 1108, 1414
SspMI CTAG 8 cut(s) 155, 347, 419, 740, 1290, 1440, 1478, 1547
SstI GAGCTC 1 cut(s) 1012
StyD4I CCNGG 4 cut(s) 102, 400, 593, 1581
StyI CCWWGG 2 cut(s) 358, 1425
TaaI ACNGT 4 cut(s) 67, 292, 515, 844
TaiI ACGT 2 cut(s) 969, 1507
TaqI TCGA 3 cut(s) 635, 1328, 1722
TatI WGTACW 3 cut(s) 74, 428, 1023
TauI GCSGC 1 cut(s) 1651
TfiI GAWTC 2 cut(s) 386, 1164
Tru1I TTAA 9 cut(s) 41, 294, 672, 789, 849, 963, 1002, 1640, 1706
Tru9I TTAA 9 cut(s) 41, 294, 672, 789, 849, 963, 1002, 1640, 1706
TscAI CASTG 1 cut(s) 871
TseI GCWGC 3 cut(s) 4, 371, 1099
TspGWI ACGGA 3 cut(s) 179, 261, 299
TspRI CASTG 1 cut(s) 871
Vha464I CTTAAG 1 cut(s) 1705
VpaK11BI GGWCC 1 cut(s) 1418
VspI ATTAAT 1 cut(s) 41
XapI RAATTY 8 cut(s) 80, 161, 806, 869, 920, 1224, 1333, 1672
XbaI TCTAGA 2 cut(s) 739, 1477
XceI RCATGY 1 cut(s) 820
XhoI CTCGAG 1 cut(s) 1721
XmnI GAANNNNTTC 3 cut(s) 585, 735, 859
XspI CTAG 8 cut(s) 155, 347, 419, 740, 1290, 1440, 1478, 1547
ZrmI AGTACT 1 cut(s) 1025
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.