RLG00000029616

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
41212078 .. 41214272
2195 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029616

Sequence Viewer

Length: 1737 bp
ATGACTTGCTTCGAAGTGATAGAAGCGTGTTCCAAATCCAAGTGTGGGGATAGTGGTCTGGCTATCCATCTCCCTTTCCACCGCGGACACCATTGTGGACCGCAATACAGTGAGTGCAATGAAGCCACAGACGGTGATGACCAACAAATCTTACTAGTGAAATTCTTTGTCACACACATAGATTATATCAATCAGGAAGTCCAAGTACATAACTCAGATAATTGCCTACTGCTAAATCCTTTAGACATCCCATACGCCAACATGCCAAAGTCTCCCTTCGAGACCTTGGAATCTGAAAGGGGTAACATTACCTTATTCCGTTGTCCTGCTAAAACAGTTGTAACTTATTCTGAATCTTATGCACAACTCGTCCCCTGCCTAGGTGACACTGACTACAATATTTATGCTATTTTTTCTGACACTGAAATTGGGGATTTGCCCGGCATAGAGTCATGCACAAAGATGTATGATGTTTTATCACTTCCATACCGGACTCCAACTATTCGTTTCAAATGGTCTACACCAAATTGTTCAGAATGTGAAGCATTGGGCAGCAAGTGTAGATTGAAGAACAGCCGCACCCAAAGTAAAATTGAATGTGTTCAGTTGAGGAAACCAAGTTCAACTCTGGGTTCATTTTTTGTCCTACTACTTGCCATTGCAATCCATCGTTTATATACATGGAATAGAAATGAAAATGAACATCAATTCAAGCTTATAAGATTTTTAGAGGATTACAAAGCTCTCAAGCCAAGCAGATATTCTTACGCAGATATTAAGAGGATTACAAATGAATTCAAGGAAAAGCTGGGTGAAGGAGCCTATGGAACTGTTTTTAAAGGAAGTCTATCTTCTGAATTCTTTGTTGCTGTCAAAGTCCTAAATAATTCTAAGGGAAATGGGGAAGAGTTTGTCAATGAAGTGGGAGCAATGGGTCATATCCACCATGTCAACGTGGTTCGAATGGTTGGCTTTTGTGCTGAAGGATACAGAAGAGCTCTTGTTTATGAGTACTTCCCCAATGGTTCATTACAAGATTTCATTTCCTCAGCAGATAATAAGAATGGTTTCCTTGGTTGGGATAAGTTGAAAGATATTTCTCTAGGAATAGCTAAAGGAATTGAATATCTCCACCAAGGATGTGATCAACGAATCCTCCATTTTGATATCAAACCTCATAATGTTTTGCTAGACCACAACTTCACTCCAAAAATTTCTGATTTTGGTTTGGCCAAATTATGTTCCAAGGATCAAAGTTTTGTGTCAATGACTACGGCTAGGGGCACAATGGGCTACATTGCACCTGAAGTATTCTCCAGGAATTTTGGAAATGTGTCTTACAAGTCTGATGTCTATAGCTTCGGAATGCTGTTGCTGGAGATAGTTGGAGGTAGGAAGAATATTGGTCCCACCATTAATGATGCTAGTGACATTTACTACCCAGAGTGGATCTATAATCTCCTAGAAGGAGGACAAGACTTGCGAATGGATATTGGGGAAGAAGGATCAGATTCTACAACTGCAAAAGAATTAGCGATTGTGGGACTTTGGTGCATACAATGGCATCCGGTGGATCGTCCATCCATGAAAGTAGTGGTTCATATGTTGGAAGGAAGAGAAAACTTAAGTATGCCGCCTAATCCTTTTGGCTCTACAGGTCCTACAAGAACAAATGGAAGTCTCCCAGCTTTACGACGCTTGAACCTTGAGTTAGAAGCAATTGCTGAATTTGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

579

Amino Acids

65.03

Weight (kDa)

5.83

Isoelectric Point (pI)

39.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 265 - 535 2.4e-44 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 266 - 534 3.9e-46 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 719
AccI GTMKAC 1 cut(s) 518
AccII CGCG 1 cut(s) 84
AciI CCGC 5 cut(s) 82, 84, 101, 577, 1634
AclWI GGATC 4 cut(s) 1257, 1457, 1513, 1581
AcoI YGGCCR 1 cut(s) 1230
AcsI RAATTY 6 cut(s) 161, 794, 857, 1212, 1321, 1727
AcuI CTGAAG 2 cut(s) 1002, 1326
AfaI GTAC 2 cut(s) 207, 1013
AfiI CCNNNNNNNGG 3 cut(s) 45, 380, 1078
AflII CTTAAG 1 cut(s) 1624
AgsI TTSAA 9 cut(s) 511, 568, 596, 624, 712, 799, 1090, 1124, 1702
AhlI ACTAGT 1 cut(s) 154
AjnI CCWGG 1 cut(s) 1316
AjuI GAANNNNNNNTTGG 2 cut(s) 745, 777
AleI CACNNNNGTG 1 cut(s) 93
AloI GAACNNNNNNTCC 2 cut(s) 604, 636
AluBI AGCT 7 cut(s) 715, 743, 808, 998, 1112, 1359, 1688
AluI AGCT 7 cut(s) 715, 743, 808, 998, 1112, 1359, 1688
Alw21I GWGCWC 1 cut(s) 1000
Alw26I GTCTC 3 cut(s) 275, 276, 1685
AlwI GGATC 4 cut(s) 1257, 1457, 1513, 1581
AoxI GGCC 1 cut(s) 1230
ApeKI GCWGC 1 cut(s) 552
ApoI RAATTY 6 cut(s) 161, 794, 857, 1212, 1321, 1727
AseI ATTAAT 1 cut(s) 1416
Asp700I GAANNNNTTC 2 cut(s) 600, 1067
AspA2I CCTAGG 1 cut(s) 379
AspS9I GGNCC 3 cut(s) 98, 1406, 1658
AsuC2I CCSGG 1 cut(s) 441
AsuHPI GGTGA 3 cut(s) 146, 395, 824
AsuII TTCGAA 2 cut(s) 12, 961
AvaII GGWCC 3 cut(s) 98, 1406, 1658
AvrII CCTAGG 1 cut(s) 379
BaeGI GKGCMC 1 cut(s) 1286
BalI TGGCCA 1 cut(s) 1232
BanII GRGCYC 1 cut(s) 1000
BarI GAAGNNNNNNTAC 2 cut(s) 189, 221
Bbv12I GWGCWC 1 cut(s) 1000
BbvCI CCTCAGC 1 cut(s) 1048
BbvI GCAGC 1 cut(s) 564
BccI CCATC 3 cut(s) 75, 675, 1588
BceAI ACGGC 1 cut(s) 1290
BciT130I CCWGG 1 cut(s) 1318
BciVI GTATCC 1 cut(s) 980
BclI TGATCA 1 cut(s) 1144
BcnI CCSGG 1 cut(s) 441
BcoDI GTCTC 3 cut(s) 275, 276, 1685
BcuI ACTAGT 1 cut(s) 154
BfaI CTAG 7 cut(s) 155, 380, 1103, 1190, 1278, 1425, 1463
BfmI CTRYAG 2 cut(s) 1354, 1653
BfrI CTTAAG 1 cut(s) 1624
BfuI GTATCC 1 cut(s) 980
BisI GCNGC 3 cut(s) 553, 577, 1634
BlnI CCTAGG 1 cut(s) 379
BlsI GCNGC 3 cut(s) 554, 578, 1635
BmcAI AGTACT 1 cut(s) 1013
Bme1390I CCNGG 2 cut(s) 441, 1318
Bme18I GGWCC 3 cut(s) 98, 1406, 1658
BmgT120I GGNCC 3 cut(s) 98, 1406, 1658
BmiI GGNNCC 2 cut(s) 820, 1408
BmrFI CCNGG 2 cut(s) 441, 1318
BmsI GCATC 2 cut(s) 1411, 1573
BpmI CTGGAG 2 cut(s) 1300, 1397
Bpu10I CCTNAGC 1 cut(s) 1048
Bpu14I TTCGAA 2 cut(s) 12, 961
BpuEI CTTGAG 2 cut(s) 731, 1727
BpuMI CCSGG 1 cut(s) 441
BsaI GGTCTC 1 cut(s) 275
BsaJI CCNNGG 6 cut(s) 82, 285, 379, 1072, 1135, 1245
BsaWI WCCGGW 2 cut(s) 489, 1567
BsaXI ACNNNNNCTCC 2 cut(s) 1140, 1170
Bsc4I CCNNNNNNNGG 3 cut(s) 45, 380, 1078
Bse3DI GCAATG 4 cut(s) 124, 657, 936, 1296
BseBI CCWGG 1 cut(s) 1318
BseDI CCNNGG 6 cut(s) 82, 285, 379, 1072, 1135, 1245
BseGI GGATG 4 cut(s) 246, 1145, 1564, 1580
BseLI CCNNNNNNNGG 3 cut(s) 45, 380, 1078
BseMI GCAATG 4 cut(s) 124, 657, 936, 1296
BseMII CTCAG 2 cut(s) 228, 1062
BseSI GKGCMC 1 cut(s) 1286
BseXI GCAGC 1 cut(s) 564
BseYI CCCAGC 2 cut(s) 808, 1684
Bsh1236I CGCG 1 cut(s) 84
BshFI GGCC 1 cut(s) 1232
BsiHKAI GWGCWC 1 cut(s) 1000
BsiSI CCGG 3 cut(s) 441, 490, 1568
BslFI GGGAC 3 cut(s) 356, 1392, 1557
BslI CCNNNNNNNGG 3 cut(s) 45, 380, 1078
BsmAI GTCTC 3 cut(s) 275, 276, 1685
BsmFI GGGAC 3 cut(s) 356, 1392, 1557
BsmI GAATGC 1 cut(s) 1371
BsnI GGCC 1 cut(s) 1232
Bso31I GGTCTC 1 cut(s) 275
Bsp119I TTCGAA 2 cut(s) 12, 961
Bsp1286I GDGCHC 2 cut(s) 1000, 1286
Bsp143I GATC 5 cut(s) 1144, 1249, 1449, 1505, 1573
BspACI CCGC 5 cut(s) 82, 84, 101, 577, 1634
BspANI GGCC 1 cut(s) 1232
BspCNI CTCAG 2 cut(s) 227, 1061
BspFNI CGCG 1 cut(s) 84
BspLI GGNNCC 2 cut(s) 820, 1408
BspPI GGATC 4 cut(s) 1257, 1457, 1513, 1581
BspQI GCTCTTC 1 cut(s) 988
BspT104I TTCGAA 2 cut(s) 12, 961
BspTI CTTAAG 1 cut(s) 1624
BspTNI GGTCTC 1 cut(s) 275
BsrDI GCAATG 4 cut(s) 124, 657, 936, 1296
BssECI CCNNGG 6 cut(s) 82, 285, 379, 1072, 1135, 1245
BssMI GATC 5 cut(s) 1144, 1249, 1449, 1505, 1573
BssT1I CCWWGG 5 cut(s) 285, 379, 1072, 1135, 1245
Bst2UI CCWGG 1 cut(s) 1318
Bst4CI ACNGT 4 cut(s) 110, 134, 337, 832
Bst6I CTCTTC 3 cut(s) 900, 988, 1609
BstAFI CTTAAG 1 cut(s) 1624
BstBI TTCGAA 2 cut(s) 12, 961
BstDEI CTNAG 3 cut(s) 214, 891, 1048
BstDSI CCRYGG 1 cut(s) 82
BstF5I GGATG 4 cut(s) 246, 1145, 1564, 1580
BstFNI CGCG 1 cut(s) 84
BstKTI GATC 5 cut(s) 1147, 1252, 1452, 1508, 1576
BstMAI GTCTC 3 cut(s) 275, 276, 1685
BstMBI GATC 5 cut(s) 1144, 1249, 1449, 1505, 1573
BstMWI GCNNNNNNNGC 1 cut(s) 1290
BstNI CCWGG 1 cut(s) 1318
BstNSI RCATGY 1 cut(s) 265
BstSCI CCNGG 2 cut(s) 439, 1316
BstSFI CTRYAG 2 cut(s) 1354, 1653
BstSLI GKGCMC 1 cut(s) 1286
BstUI CGCG 1 cut(s) 84
BstV1I GCAGC 1 cut(s) 564
BstX2I RGATCY 1 cut(s) 1449
BstYI RGATCY 1 cut(s) 1449
BsuI GTATCC 1 cut(s) 980
BsuRI GGCC 1 cut(s) 1232
BtgI CCRYGG 1 cut(s) 82
BtsCI GGATG 4 cut(s) 246, 1145, 1564, 1580
BtsIMutI CAGTG 3 cut(s) 115, 387, 420
Cfr13I GGNCC 3 cut(s) 98, 1406, 1658
Cfr42I CCGCGG 1 cut(s) 85
CseI GACGC 1 cut(s) 1704
Csp6I GTAC 2 cut(s) 206, 1012
CviAII CATG 5 cut(s) 262, 453, 681, 947, 1585
CviQI GTAC 2 cut(s) 206, 1012
DdeI CTNAG 3 cut(s) 214, 891, 1048
DpnI GATC 5 cut(s) 1146, 1251, 1451, 1507, 1575
DpnII GATC 5 cut(s) 1144, 1249, 1449, 1505, 1573
DraI TTTAAA 1 cut(s) 838
EaeI YGGCCR 1 cut(s) 1230
Eam1104I CTCTTC 3 cut(s) 900, 988, 1609
EarI CTCTTC 3 cut(s) 900, 988, 1609
Ecl136II GAGCTC 1 cut(s) 998
Eco130I CCWWGG 5 cut(s) 285, 379, 1072, 1135, 1245
Eco24I GRGCYC 1 cut(s) 1000
Eco31I GGTCTC 1 cut(s) 275
Eco32I GATATC 1 cut(s) 1168
Eco47I GGWCC 3 cut(s) 98, 1406, 1658
Eco53kI GAGCTC 1 cut(s) 998
Eco57I CTGAAG 2 cut(s) 1002, 1326
EcoICRI GAGCTC 1 cut(s) 998
EcoO109I RGGNCCY 1 cut(s) 1658
EcoRI GAATTC 2 cut(s) 794, 857
EcoRII CCWGG 1 cut(s) 1316
EcoRV GATATC 1 cut(s) 1168
EcoT14I CCWWGG 5 cut(s) 285, 379, 1072, 1135, 1245
EcoT38I GRGCYC 1 cut(s) 1000
ErhI CCWWGG 5 cut(s) 285, 379, 1072, 1135, 1245
FaeI CATG 5 cut(s) 265, 456, 684, 950, 1588
FalI AAGNNNNNCTT 4 cut(s) 260, 292, 835, 867
FaqI GGGAC 3 cut(s) 356, 1392, 1557
FatI CATG 5 cut(s) 261, 452, 680, 946, 1584
FauNDI CATATG 1 cut(s) 1602
FbaI TGATCA 1 cut(s) 1144
FblI GTMKAC 1 cut(s) 518
Fnu4HI GCNGC 3 cut(s) 553, 577, 1634
FokI GGATG 4 cut(s) 233, 1152, 1551, 1567
FriOI GRGCYC 1 cut(s) 1000
Fsp4HI GCNGC 3 cut(s) 553, 577, 1634
FspBI CTAG 7 cut(s) 155, 380, 1103, 1190, 1278, 1425, 1463
GluI GCNGC 3 cut(s) 553, 577, 1634
GsaI CCCAGC 2 cut(s) 812, 1688
GsuI CTGGAG 2 cut(s) 1300, 1397
HaeIII GGCC 1 cut(s) 1232
HapII CCGG 3 cut(s) 441, 490, 1568
HgaI GACGC 1 cut(s) 1704
Hin1II CATG 5 cut(s) 265, 456, 684, 950, 1588
HincII GTYRAC 1 cut(s) 952
HindII GTYRAC 1 cut(s) 952
HindIII AAGCTT 1 cut(s) 713
HinfI GANTC 6 cut(s) 290, 353, 449, 493, 1152, 1511
HpaII CCGG 3 cut(s) 441, 490, 1568
HphI GGTGA 3 cut(s) 146, 395, 824
Hpy166II GTNNAC 3 cut(s) 98, 519, 952
Hpy188III TCNNGA 2 cut(s) 194, 280
Hpy8I GTNNAC 3 cut(s) 98, 519, 952
Hpy99I CGWCG 1 cut(s) 1698
HpyAV CCTTC 6 cut(s) 286, 809, 977, 1460, 1496, 1604
HpyCH4III ACNGT 4 cut(s) 110, 134, 337, 832
HpyCH4IV ACGT 1 cut(s) 954
HpyCH4V TGCA 7 cut(s) 117, 362, 456, 662, 1301, 1523, 1554
HpyF10VI GCNNNNNNNGC 1 cut(s) 1290
HpyF3I CTNAG 3 cut(s) 214, 891, 1048
HpySE526I ACGT 1 cut(s) 954
Hsp92II CATG 5 cut(s) 265, 456, 684, 950, 1588
Ksp22I TGATCA 1 cut(s) 1144
KspI CCGCGG 1 cut(s) 85
Kzo9I GATC 5 cut(s) 1144, 1249, 1449, 1505, 1573
LguI GCTCTTC 1 cut(s) 988
LmnI GCTCC 2 cut(s) 818, 926
Lsp1109I GCAGC 1 cut(s) 564
LweI GCATC 2 cut(s) 1411, 1573
MaeI CTAG 7 cut(s) 155, 380, 1103, 1190, 1278, 1425, 1463
MaeII ACGT 1 cut(s) 954
MaeIII GTNAC 5 cut(s) 169, 302, 340, 383, 1427
MalI GATC 5 cut(s) 1146, 1251, 1451, 1507, 1575
MboI GATC 5 cut(s) 1144, 1249, 1449, 1505, 1573
MboII GAAGA 7 cut(s) 580, 843, 917, 1005, 1408, 1511, 1626
MfeI CAATTG 1 cut(s) 1719
MflI RGATCY 1 cut(s) 1449
MhlI GDGCHC 2 cut(s) 1000, 1286
MlsI TGGCCA 1 cut(s) 1232
MluNI TGGCCA 1 cut(s) 1232
MlyI GAGTC 2 cut(s) 458, 487
MmeI TCCRAC 3 cut(s) 521, 1366, 1587
MnlI CCTC 8 cut(s) 603, 724, 774, 1057, 1166, 1185, 1382, 1463
Mox20I TGGCCA 1 cut(s) 1232
MroXI GAANNNNTTC 2 cut(s) 600, 1067
MscI TGGCCA 1 cut(s) 1232
MseI TTAA 4 cut(s) 777, 837, 1416, 1625
MslI CAYNNNNRTG 2 cut(s) 93, 461
Msp20I TGGCCA 1 cut(s) 1232
MspA1I CMGCKG 1 cut(s) 84
MspCI CTTAAG 1 cut(s) 1624
MspI CCGG 3 cut(s) 441, 490, 1568
MspR9I CCNGG 2 cut(s) 441, 1318
MunI CAATTG 1 cut(s) 1719
Mva1269I GAATGC 1 cut(s) 1371
MvaI CCWGG 1 cut(s) 1318
MvnI CGCG 1 cut(s) 84
MwoI GCNNNNNNNGC 1 cut(s) 1290
NciI CCSGG 1 cut(s) 441
NdeI CATATG 1 cut(s) 1602
NdeII GATC 5 cut(s) 1144, 1249, 1449, 1505, 1573
NlaIII CATG 5 cut(s) 265, 456, 684, 950, 1588
NlaIV GGNNCC 2 cut(s) 820, 1408
NmuCI GTSAC 3 cut(s) 169, 383, 1427
NspI RCATGY 1 cut(s) 265
NspV TTCGAA 2 cut(s) 12, 961
OliI CACNNNNGTG 1 cut(s) 93
PciSI GCTCTTC 1 cut(s) 988
PctI GAATGC 1 cut(s) 1371
PdmI GAANNNNTTC 2 cut(s) 600, 1067
PfeI GAWTC 4 cut(s) 290, 353, 1152, 1511
PfoI TCCNGGA 1 cut(s) 1316
PkrI GCNGC 3 cut(s) 554, 578, 1635
PleI GAGTC 2 cut(s) 457, 487
PpsI GAGTC 2 cut(s) 457, 487
PpuMI RGGWCCY 1 cut(s) 1658
PshBI ATTAAT 1 cut(s) 1416
PsiI TTATAA 1 cut(s) 719
Psp124BI GAGCTC 1 cut(s) 1000
Psp5II RGGWCCY 1 cut(s) 1658
Psp6I CCWGG 1 cut(s) 1316
PspFI CCCAGC 2 cut(s) 808, 1684
PspGI CCWGG 1 cut(s) 1316
PspN4I GGNNCC 2 cut(s) 820, 1408
PspPI GGNCC 3 cut(s) 98, 1406, 1658
PspPPI RGGWCCY 1 cut(s) 1658
PsuI RGATCY 1 cut(s) 1449
RsaI GTAC 2 cut(s) 207, 1013
RsaNI GTAC 2 cut(s) 206, 1012
RseI CAYNNNNRTG 2 cut(s) 93, 461
SacI GAGCTC 1 cut(s) 1000
SacII CCGCGG 1 cut(s) 85
SapI GCTCTTC 1 cut(s) 988
SaqAI TTAA 4 cut(s) 777, 837, 1416, 1625
SatI GCNGC 3 cut(s) 553, 577, 1634
Sau3AI GATC 5 cut(s) 1144, 1249, 1449, 1505, 1573
Sau96I GGNCC 3 cut(s) 98, 1406, 1658
ScaI AGTACT 1 cut(s) 1013
SchI GAGTC 2 cut(s) 458, 487
ScrFI CCNGG 2 cut(s) 441, 1318
SduI GDGCHC 2 cut(s) 1000, 1286
SfaNI GCATC 2 cut(s) 1411, 1573
SfcI CTRYAG 2 cut(s) 1354, 1653
Sfr303I CCGCGG 1 cut(s) 85
SfuI TTCGAA 2 cut(s) 12, 961
SgrBI CCGCGG 1 cut(s) 85
SinI GGWCC 3 cut(s) 98, 1406, 1658
SmiMI CAYNNNNRTG 2 cut(s) 93, 461
SmlI CTYRAG 3 cut(s) 746, 1624, 1706
SmoI CTYRAG 3 cut(s) 746, 1624, 1706
SpeI ACTAGT 1 cut(s) 154
SsiI CCGC 5 cut(s) 82, 84, 101, 577, 1634
SspI AATATT 2 cut(s) 400, 1402
SspMI CTAG 7 cut(s) 155, 380, 1103, 1190, 1278, 1425, 1463
SstI GAGCTC 1 cut(s) 1000
StyD4I CCNGG 2 cut(s) 439, 1316
StyI CCWWGG 5 cut(s) 285, 379, 1072, 1135, 1245
TaaI ACNGT 4 cut(s) 110, 134, 337, 832
TaiI ACGT 1 cut(s) 957
TaqI TCGA 3 cut(s) 12, 279, 961
TatI WGTACW 2 cut(s) 205, 1011
TauI GCSGC 2 cut(s) 579, 1636
TfiI GAWTC 4 cut(s) 290, 353, 1152, 1511
Tru1I TTAA 4 cut(s) 777, 837, 1416, 1625
Tru9I TTAA 4 cut(s) 777, 837, 1416, 1625
TscAI CASTG 3 cut(s) 115, 394, 427
TseFI GTSAC 3 cut(s) 169, 383, 1427
TseI GCWGC 1 cut(s) 552
Tsp45I GTSAC 3 cut(s) 169, 383, 1427
TspGWI ACGGA 1 cut(s) 308
TspRI CASTG 3 cut(s) 115, 394, 427
Vha464I CTTAAG 1 cut(s) 1624
VpaK11BI GGWCC 3 cut(s) 98, 1406, 1658
VspI ATTAAT 1 cut(s) 1416
XapI RAATTY 6 cut(s) 161, 794, 857, 1212, 1321, 1727
XceI RCATGY 1 cut(s) 265
XcmI CCANNNNNNNNNTGG 1 cut(s) 1591
XmaJI CCTAGG 1 cut(s) 379
XmiI GTMKAC 1 cut(s) 518
XmnI GAANNNNTTC 2 cut(s) 600, 1067
XspI CTAG 7 cut(s) 155, 380, 1103, 1190, 1278, 1425, 1463
ZrmI AGTACT 1 cut(s) 1013
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.