Rroxscaffold_1G00033950

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000107
Physical Location & Seq
Forward (+)
49074614 .. 49076649
2036 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00033950.1

Sequence Viewer

Length: 1749 bp
ATGCTTCTAACTATGAGTTTCTTCTTCTGGTTGCTCCTGATATTTGTAGATGTAGATGTGCATGGTGGAGGAGTAGGTCGTGAAAATTGCACAGAAACAAGATGTAGCAGCGATGGCCCAGCTATCCGGTTCCCATTTCGACTGAAAGGCAGGCAACCGGTCCAATGTGGTTCCCCGGGCTTTGATCTTGCATGCACCAACGACAACCAGACACTGCTTCAGATGCCATCATCATCTAAACTCTTTGTTACAGAGATTAACTACAAATCACAGACAATTGAAGCAGAACTTGCACCTGATTGCTTGGATGGAGACATTTTCGACCTCGGTTCTTCTTCTACCTTCAAATATGTAGGCAACGCAAGCTTGTTCAGTTGCCCACCATCAACTGTGAGAGATCAATATATTACAGCATATCCCTACAAGTACAATTCTCGTTGTCTGGCAAGATTGAGCCCTTGCCATGGTAATCCAGGCAACCAAATTTTTGCTTTTAGGACAGGTTGTTGTTCTATTGATAACATTCCCCTGGTGTCTTGTACCAAGGTGCATGACTACAAAGATTCTCTTGCATACACAGATGACTACATATTTGACGATATATATTCACGCATGTCTCTCTACTGGTCCATACCATCTTGTAAACATTGTAAAGAAAAGGGTGAGCTATGTCGATTCACAAATCAGACAGATCCTCAAACTCAATGCTTGGATAGACCCAAAGCCAGAGCAGCGACGGGAACAATAATCTACTATCCCTTTTGCACTAAAAGACAAGAAAATCAGCTGAGAATTAAAAGATTTTTGGATGACTACAGAGCTCTTAAGCCAAGCAGATATTCTTATGCAGATATTAAGAGGATAACAGAGCAGTTCAAGGAGAAGCTGGGTCAAGGGGCCTATGGAACTGTCTTTAAAGGTAAACTTTCCTCTGAATTACTTGTTGCTGTGAAAATCCTCAACAATTCAAATGAGAAAGGGGAAGATTTTATCAATGAAGTGGGCACAATGAGTCAAATCCACCATGTCAATGTGGTACGCTTGGTTGGTTACTGTGCTGATGGCTTTATACGAGCTCTTGTTTATGAATTCTTACCAAACGGTCCACTCCAGAATTTCTTATCATCAGCAGATAATGAGAGTTCGTTCCTTGGTTGGGATAAGTTGCAAGATATTGCTTTAGGTATAGCCAAAGGAATTGAATATATTCACCAAGGTTGTGAACAACAAATCCTCCACTTTGACATCAAACCCCATAATGTGTTGCTAGACCATGATTTCACTCCAAAAGTTTCGGATTTTGGTTTAGCCAAGTTGTGCTCTAAGGATCAAAGCTCGGTATCCATGACTGCAGCGAGGGGAACCATGGGCTACATTGCACCAGAAGTCTTCTCTAGGAACTTCGGTAAGGTGTCATATAAGGCAGATGTCTATAGTTTTGGAACATTGCTTCTTGAAATGGTTGGGGGCCGAAAGAATTTTAAAGTCATGGAAGACTCCACCAGCCAGGTCTACTTCCCAGAATGGATCTATAACCTCTTAGAACAAGGGAACGACCTTCGCATCCATATTGGCGACAAAGGAAATGTTGAAATTGCTAAGAAACTTGCGGTTGTGGGTCTATGGTGCATCCAATGGTATCCAATAGACCGTCCTTCCATGAAAACAGTAGTTCAAATGTTGGAAAGGGAAGGTGACAATCTGACCATGCCTCCTAATCCCTTTGCCTCTACTTCATCTTCGAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase Pkinase_Tyr

Protein Analysis

582

Amino Acids

65.52

Weight (kDa)

6.61

Isoelectric Point (pI)

39.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 30 - 94 1.3e-17 Wall-associated receptor kinase galacturonan-binding
PK_Tyr_Ser-Thr PF07714 291 - 561 3.3e-45 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 292 - 559 1.1e-45 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 1512
AciI CCGC 1 cut(s) 1610
AclWI GGATC 3 cut(s) 686, 1335, 1535
AcsI RAATTY 4 cut(s) 483, 1088, 1114, 1477
AcuI CTGAAG 1 cut(s) 203
AfaI GTAC 3 cut(s) 428, 541, 1038
AfiI CCNNNNNNNGG 2 cut(s) 464, 1156
AflII CTTAAG 1 cut(s) 824
AgeI ACCGGT 1 cut(s) 157
AgsI TTSAA 8 cut(s) 281, 346, 877, 969, 1202, 1457, 1592, 1676
AjnI CCWGG 3 cut(s) 472, 528, 1506
AjuI GAANNNNNNNTTGG 2 cut(s) 823, 855
AloI GAACNNNNNNTCC 2 cut(s) 1215, 1247
AluBI AGCT 8 cut(s) 122, 366, 667, 787, 821, 886, 1076, 1335
AluI AGCT 8 cut(s) 122, 366, 667, 787, 821, 886, 1076, 1335
Alw21I GWGCWC 3 cut(s) 823, 1078, 1322
Alw26I GTCTC 2 cut(s) 306, 621
AlwI GGATC 3 cut(s) 686, 1335, 1535
AlwNI CAGNNNCTG 1 cut(s) 214
Ama87I CYCGRG 1 cut(s) 175
AoxI GGCC 3 cut(s) 115, 897, 1468
ApeKI GCWGC 3 cut(s) 108, 731, 1352
ApoI RAATTY 4 cut(s) 483, 1088, 1114, 1477
ArsI GACNNNNNNTTYG 2 cut(s) 575, 607
AsiGI ACCGGT 1 cut(s) 157
Asp700I GAANNNNTTC 1 cut(s) 1206
AspS9I GGNCC 6 cut(s) 116, 160, 627, 897, 1103, 1468
AsuC2I CCSGG 2 cut(s) 176, 177
AsuHPI GGTGA 3 cut(s) 674, 1202, 1706
AvaI CYCGRG 1 cut(s) 175
AvaII GGWCC 3 cut(s) 160, 627, 1103
BaeGI GKGCMC 1 cut(s) 1007
BanII GRGCYC 3 cut(s) 458, 823, 1078
BbsI GAAGAC 2 cut(s) 1381, 1500
Bbv12I GWGCWC 3 cut(s) 823, 1078, 1322
BbvI GCAGC 3 cut(s) 120, 743, 1364
BccI CCATC 6 cut(s) 107, 235, 302, 391, 643, 1055
BciT130I CCWGG 3 cut(s) 474, 530, 1508
BciVI GTATCC 2 cut(s) 1351, 1650
BcnI CCSGG 2 cut(s) 176, 177
BcoDI GTCTC 2 cut(s) 306, 621
BfaI CTAG 2 cut(s) 1268, 1395
BfmI CTRYAG 3 cut(s) 814, 1350, 1432
BfrI CTTAAG 1 cut(s) 824
BfuI GTATCC 2 cut(s) 1351, 1650
BisI GCNGC 3 cut(s) 109, 732, 1353
BlsI GCNGC 3 cut(s) 110, 733, 1354
Bme1390I CCNGG 5 cut(s) 176, 177, 474, 530, 1508
Bme18I GGWCC 3 cut(s) 160, 627, 1103
BmeT110I CYCGRG 1 cut(s) 175
BmgT120I GGNCC 6 cut(s) 116, 160, 627, 897, 1103, 1468
BmiI GGNNCC 5 cut(s) 131, 172, 898, 1363, 1469
BmrFI CCNGG 5 cut(s) 176, 177, 474, 530, 1508
BmsI GCATC 3 cut(s) 213, 1572, 1638
BpiI GAAGAC 2 cut(s) 1381, 1500
BpmI CTGGAG 1 cut(s) 1094
BpuMI CCSGG 2 cut(s) 176, 177
BsaJI CCNNGG 9 cut(s) 174, 175, 325, 463, 528, 543, 1150, 1213, 1365
BsaWI WCCGGW 2 cut(s) 126, 157
BsaXI ACNNNNNCTCC 4 cut(s) 1218, 1248, 1696, 1726
Bsc4I CCNNNNNNNGG 2 cut(s) 464, 1156
Bse118I RCCGGY 1 cut(s) 157
Bse1I ACTGG 1 cut(s) 629
Bse3DI GCAATG 2 cut(s) 1374, 1445
BseBI CCWGG 3 cut(s) 474, 530, 1508
BseDI CCNNGG 9 cut(s) 174, 175, 325, 463, 528, 543, 1150, 1213, 1365
BseGI GGATG 4 cut(s) 313, 814, 1563, 1629
BseLI CCNNNNNNNGG 2 cut(s) 464, 1156
BseMI GCAATG 2 cut(s) 1374, 1445
BseMII CTCAG 1 cut(s) 779
BseNI ACTGG 1 cut(s) 629
BseRI GAGGAG 1 cut(s) 84
BseSI GKGCMC 1 cut(s) 1007
BseXI GCAGC 3 cut(s) 120, 743, 1364
BseYI CCCAGC 2 cut(s) 118, 886
BshFI GGCC 3 cut(s) 117, 899, 1470
BshTI ACCGGT 1 cut(s) 157
BsiHKAI GWGCWC 3 cut(s) 823, 1078, 1322
BsiHKCI CYCGRG 1 cut(s) 175
BsiSI CCGG 3 cut(s) 127, 158, 176
BslI CCNNNNNNNGG 2 cut(s) 464, 1156
BsmAI GTCTC 2 cut(s) 306, 621
BsnI GGCC 3 cut(s) 117, 899, 1470
BsoBI CYCGRG 1 cut(s) 175
Bsp1286I GDGCHC 5 cut(s) 458, 823, 1007, 1078, 1322
Bsp143I GATC 5 cut(s) 184, 397, 691, 1327, 1527
Bsp19I CCATGG 2 cut(s) 463, 1365
BspACI CCGC 1 cut(s) 1610
BspANI GGCC 3 cut(s) 117, 899, 1470
BspCNI CTCAG 1 cut(s) 780
BspLI GGNNCC 5 cut(s) 131, 172, 898, 1363, 1469
BspMAI CTGCAG 1 cut(s) 1354
BspPI GGATC 3 cut(s) 686, 1335, 1535
BspTI CTTAAG 1 cut(s) 824
BsrDI GCAATG 2 cut(s) 1374, 1445
BsrFI RCCGGY 1 cut(s) 157
BsrI ACTGG 1 cut(s) 629
BssAI RCCGGY 1 cut(s) 157
BssECI CCNNGG 9 cut(s) 174, 175, 325, 463, 528, 543, 1150, 1213, 1365
BssMI GATC 5 cut(s) 184, 397, 691, 1327, 1527
BssT1I CCWWGG 5 cut(s) 463, 543, 1150, 1213, 1365
Bst2UI CCWGG 3 cut(s) 474, 530, 1508
Bst4CI ACNGT 6 cut(s) 391, 910, 1055, 1103, 1652, 1669
BstAFI CTTAAG 1 cut(s) 824
BstAPI GCANNNNNTGC 1 cut(s) 290
BstC8I GCNNGC 3 cut(s) 152, 193, 364
BstDEI CTNAG 4 cut(s) 788, 1323, 1540, 1599
BstDSI CCRYGG 2 cut(s) 463, 1365
BstF5I GGATG 4 cut(s) 313, 814, 1563, 1629
BstKTI GATC 5 cut(s) 187, 400, 694, 1330, 1530
BstMAI GTCTC 2 cut(s) 306, 621
BstMBI GATC 5 cut(s) 184, 397, 691, 1327, 1527
BstMWI GCNNNNNNNGC 5 cut(s) 114, 223, 290, 363, 731
BstNI CCWGG 3 cut(s) 474, 530, 1508
BstNSI RCATGY 2 cut(s) 195, 616
BstSCI CCNGG 5 cut(s) 174, 175, 472, 528, 1506
BstSFI CTRYAG 3 cut(s) 814, 1350, 1432
BstSLI GKGCMC 1 cut(s) 1007
BstV1I GCAGC 3 cut(s) 120, 743, 1364
BstV2I GAAGAC 2 cut(s) 1381, 1500
BstX2I RGATCY 2 cut(s) 691, 1527
BstYI RGATCY 2 cut(s) 691, 1527
BsuI GTATCC 2 cut(s) 1351, 1650
BsuRI GGCC 3 cut(s) 117, 899, 1470
BtgI CCRYGG 2 cut(s) 463, 1365
BtgZI GCGATG 1 cut(s) 126
BtsCI GGATG 4 cut(s) 313, 814, 1563, 1629
BtsI GCAGTG 1 cut(s) 212
BtsIMutI CAGTG 1 cut(s) 212
Cac8I GCNNGC 3 cut(s) 152, 193, 364
CaiI CAGNNNCTG 1 cut(s) 214
Cfr10I RCCGGY 1 cut(s) 157
Cfr13I GGNCC 6 cut(s) 116, 160, 627, 897, 1103, 1468
Cfr9I CCCGGG 1 cut(s) 175
Csp6I GTAC 3 cut(s) 427, 540, 1037
CspAI ACCGGT 1 cut(s) 157
CviQI GTAC 3 cut(s) 427, 540, 1037
DdeI CTNAG 4 cut(s) 788, 1323, 1540, 1599
DpnI GATC 5 cut(s) 186, 399, 693, 1329, 1529
DpnII GATC 5 cut(s) 184, 397, 691, 1327, 1527
DraI TTTAAA 2 cut(s) 916, 1483
Ecl136II GAGCTC 2 cut(s) 821, 1076
Eco130I CCWWGG 5 cut(s) 463, 543, 1150, 1213, 1365
Eco24I GRGCYC 3 cut(s) 458, 823, 1078
Eco47I GGWCC 3 cut(s) 160, 627, 1103
Eco53kI GAGCTC 2 cut(s) 821, 1076
Eco57I CTGAAG 1 cut(s) 203
Eco88I CYCGRG 1 cut(s) 175
EcoICRI GAGCTC 2 cut(s) 821, 1076
EcoO109I RGGNCCY 1 cut(s) 897
EcoRI GAATTC 1 cut(s) 1088
EcoRII CCWGG 3 cut(s) 472, 528, 1506
EcoT14I CCWWGG 5 cut(s) 463, 543, 1150, 1213, 1365
EcoT38I GRGCYC 3 cut(s) 458, 823, 1078
ErhI CCWWGG 5 cut(s) 463, 543, 1150, 1213, 1365
FalI AAGNNNNNCTT 6 cut(s) 273, 305, 552, 584, 909, 941
FblI GTMKAC 1 cut(s) 1512
Fnu4HI GCNGC 3 cut(s) 109, 732, 1353
FokI GGATG 4 cut(s) 320, 821, 1550, 1616
FriOI GRGCYC 3 cut(s) 458, 823, 1078
Fsp4HI GCNGC 3 cut(s) 109, 732, 1353
FspBI CTAG 2 cut(s) 1268, 1395
GluI GCNGC 3 cut(s) 109, 732, 1353
GsaI CCCAGC 2 cut(s) 122, 890
GsuI CTGGAG 1 cut(s) 1094
HaeIII GGCC 3 cut(s) 117, 899, 1470
HapII CCGG 3 cut(s) 127, 158, 176
HindIII AAGCTT 1 cut(s) 364
HinfI GANTC 4 cut(s) 563, 675, 1012, 1496
HpaII CCGG 3 cut(s) 127, 158, 176
HphI GGTGA 3 cut(s) 674, 1202, 1706
Hpy166II GTNNAC 5 cut(s) 644, 923, 1106, 1223, 1513
Hpy188I TCNGA 5 cut(s) 222, 687, 934, 1297, 1704
Hpy188III TCNNGA 4 cut(s) 37, 80, 1111, 1454
Hpy8I GTNNAC 5 cut(s) 644, 923, 1106, 1223, 1513
Hpy99I CGWCG 1 cut(s) 739
HpyAV CCTTC 4 cut(s) 352, 1568, 1665, 1685
HpyCH4III ACNGT 6 cut(s) 391, 910, 1055, 1103, 1652, 1669
HpyF10VI GCNNNNNNNGC 5 cut(s) 114, 223, 290, 363, 731
HpyF3I CTNAG 4 cut(s) 788, 1323, 1540, 1599
Kzo9I GATC 5 cut(s) 184, 397, 691, 1327, 1527
LmnI GCTCC 1 cut(s) 39
Lsp1109I GCAGC 3 cut(s) 120, 743, 1364
LweI GCATC 3 cut(s) 213, 1572, 1638
MaeI CTAG 2 cut(s) 1268, 1395
MaeIII GTNAC 3 cut(s) 247, 1049, 1694
MalI GATC 5 cut(s) 186, 399, 693, 1329, 1529
MboI GATC 5 cut(s) 184, 397, 691, 1327, 1527
MboII GAAGA 8 cut(s) 13, 16, 324, 327, 995, 1381, 1505, 1731
MfeI CAATTG 1 cut(s) 276
MflI RGATCY 2 cut(s) 691, 1527
MhlI GDGCHC 5 cut(s) 458, 823, 1007, 1078, 1322
MlyI GAGTC 2 cut(s) 1021, 1490
MmeI TCCRAC 1 cut(s) 1662
MroXI GAANNNNTTC 1 cut(s) 1206
MseI TTAA 6 cut(s) 258, 795, 825, 855, 915, 1482
MslI CAYNNNNRTG 1 cut(s) 1029
MspA1I CMGCKG 1 cut(s) 787
MspCI CTTAAG 1 cut(s) 824
MspI CCGG 3 cut(s) 127, 158, 176
MspR9I CCNGG 5 cut(s) 176, 177, 474, 530, 1508
MunI CAATTG 1 cut(s) 276
MvaI CCWGG 3 cut(s) 474, 530, 1508
MwoI GCNNNNNNNGC 5 cut(s) 114, 223, 290, 363, 731
NciI CCSGG 2 cut(s) 176, 177
NcoI CCATGG 2 cut(s) 463, 1365
NdeII GATC 5 cut(s) 184, 397, 691, 1327, 1527
NlaIV GGNNCC 5 cut(s) 131, 172, 898, 1363, 1469
NmuCI GTSAC 1 cut(s) 1694
NspI RCATGY 2 cut(s) 195, 616
PaeI GCATGC 1 cut(s) 195
PdmI GAANNNNTTC 1 cut(s) 1206
PfeI GAWTC 2 cut(s) 563, 675
PinAI ACCGGT 1 cut(s) 157
PkrI GCNGC 3 cut(s) 110, 733, 1354
PleI GAGTC 2 cut(s) 1020, 1490
PpsI GAGTC 2 cut(s) 1020, 1490
Psp124BI GAGCTC 2 cut(s) 823, 1078
Psp6I CCWGG 3 cut(s) 472, 528, 1506
PspFI CCCAGC 2 cut(s) 118, 886
PspGI CCWGG 3 cut(s) 472, 528, 1506
PspN4I GGNNCC 5 cut(s) 131, 172, 898, 1363, 1469
PspPI GGNCC 6 cut(s) 116, 160, 627, 897, 1103, 1468
PstI CTGCAG 1 cut(s) 1354
PstNI CAGNNNCTG 1 cut(s) 214
PsuI RGATCY 2 cut(s) 691, 1527
PvuII CAGCTG 1 cut(s) 787
RsaI GTAC 3 cut(s) 428, 541, 1038
RsaNI GTAC 3 cut(s) 427, 540, 1037
RseI CAYNNNNRTG 1 cut(s) 1029
SacI GAGCTC 2 cut(s) 823, 1078
SaqAI TTAA 6 cut(s) 258, 795, 825, 855, 915, 1482
SatI GCNGC 3 cut(s) 109, 732, 1353
Sau3AI GATC 5 cut(s) 184, 397, 691, 1327, 1527
Sau96I GGNCC 6 cut(s) 116, 160, 627, 897, 1103, 1468
SchI GAGTC 2 cut(s) 1021, 1490
ScrFI CCNGG 5 cut(s) 176, 177, 474, 530, 1508
SduI GDGCHC 5 cut(s) 458, 823, 1007, 1078, 1322
SfaNI GCATC 3 cut(s) 213, 1572, 1638
SfcI CTRYAG 3 cut(s) 814, 1350, 1432
SinI GGWCC 3 cut(s) 160, 627, 1103
SmaI CCCGGG 1 cut(s) 177
SmiMI CAYNNNNRTG 1 cut(s) 1029
SmlI CTYRAG 1 cut(s) 824
SmoI CTYRAG 1 cut(s) 824
SphI GCATGC 1 cut(s) 195
SsiI CCGC 1 cut(s) 1610
SspMI CTAG 2 cut(s) 1268, 1395
SstI GAGCTC 2 cut(s) 823, 1078
StyD4I CCNGG 5 cut(s) 174, 175, 472, 528, 1506
StyI CCWWGG 5 cut(s) 463, 543, 1150, 1213, 1365
TaaI ACNGT 6 cut(s) 391, 910, 1055, 1103, 1652, 1669
TaqI TCGA 4 cut(s) 139, 321, 673, 1742
TatI WGTACW 1 cut(s) 426
TfiI GAWTC 2 cut(s) 563, 675
Tru1I TTAA 6 cut(s) 258, 795, 825, 855, 915, 1482
Tru9I TTAA 6 cut(s) 258, 795, 825, 855, 915, 1482
TscAI CASTG 1 cut(s) 219
TseFI GTSAC 1 cut(s) 1694
TseI GCWGC 3 cut(s) 108, 731, 1352
Tsp45I GTSAC 1 cut(s) 1694
TspDTI ATGAA 4 cut(s) 1011, 1101, 1676, 1725
TspMI CCCGGG 1 cut(s) 175
TspRI CASTG 1 cut(s) 219
Vha464I CTTAAG 1 cut(s) 824
VpaK11BI GGWCC 3 cut(s) 160, 627, 1103
XapI RAATTY 4 cut(s) 483, 1088, 1114, 1477
XceI RCATGY 2 cut(s) 195, 616
XmaI CCCGGG 1 cut(s) 175
XmiI GTMKAC 1 cut(s) 1512
XmnI GAANNNNTTC 1 cut(s) 1206
XspI CTAG 2 cut(s) 1268, 1395
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.