pycom01g08880

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
OG0000107
Physical Location & Seq
Reverse (-)
9856378 .. 9858368
1991 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g08880.2

Sequence Viewer

Length: 1839 bp
ATGCGTATTATTATTACTATTACTAGCTCAAAAATGCAGAAATTGCTCATCGCTTCCTTTTGCATATTGTTACTGGTTTTCTTCAAAGTAGTTGAAGCAAGCAAATTTACGTGCTCCAAATCCAAATGTAGCGATGATCAAGGCCCGGCTATCCATTTTCCACTGCACCTCAAGCATCATTGTGGTCCTGGGCTTGAATGCAATCAGATAGATGAGCAGCCGATAATCCTAGTAAAATTCTTTGTCAAGCGCATAGATTATAAGCGTCAGGAAATCCAAGTGCATAACCCATATTACTCTAATAATTGCTTGCTGCTAATAAAGCCTGTAAAACTCCCAAACATGTCACTCTCTCCCTTCTACTTGTCAGTTTTCGACTTCTGTAACATTACCTTATTCAGCTGCCCACCTGTTGGAACGTATTATGGGCGTCAAGTCCCCTGCCTCGGTGACCCTGGTAGCACAACTTATGGTCTTTATGGTAATCATAGTTTTGATTTTCTCTTCAAGGAGCTACCATCTTGTACAAGAATGTATGATGTTTTATCAGTTCCAACTGGTACTTCGTTAGGAAATGAATATGATGTTCTTCGTTTCAAGTGGTCTAAACCAAATTGTACAGAATGTGAAGCAGATGGAAAGAGGTGTAGATGGAAGAACAGTGGCACCAACAGTGAAATTGAATGTGTGAGGAAACCAAGCAACACATGGAAATTATTGGCTACTGGTGGAATCCTGGGTTCTTTGCTTCTTGTTCTACTGATGATTGCAGCATATCGGGTATATAGCGCTGACAGAAAGGAAAAAGAGAGTCGATTAAGAATTGAAAGATTTTTGGAGGATTACAAAGCACTGAAACCGAGCAGGTATTTGTACGCAGATATTAAGAGGATTACCGATCAATTCAAGGACAAGTTGGGCCAAGGAGCCTATGGAACTGTCTTCAAAGGAAGGCTTTCTTCTGAATTCCTTATCGCTGTCAAAGTCCTCAACAGTTCTAAGGGAGATGGGGAAGAGTTCGTAAATGAAGTGCGAACCATGGGTCATATCCACCACGTCAACGTGGCTCGCTTGGTTGGATTTTGTGCTGATGGATTTGTACGAGCTCTTGTTTACGAATTCTTCCCCAATGGTTCCCTGCAAGATTTCATTTCATCTGCAGATAGTAAGAATTCCTTCCTTGGTTGGGATAAGTTGCAAAATATTGCCCTCGGCATAGCCAGAGGAATTAAATATCTTCACCAAGGATGTGATCAACGAATCCTCCATTTCGATATCAAACCCCATAATGTTTTGCTAGACCAAAACTTCACTCCAAAAATTTCTGATTTTGGTTTGGCCAAGTTATGTTCCAAGGATCAAAGCTTGGTGTCTATGACTACAGCTAGGGGGACCATGGGATACATTGCACCCGAAGTGTTCTCCAGGAATTTCGGAAACGTGTCTTACAAGGCAGATGTCTATAGCTTTGGAATGCTGCTGCTCGAGATGGTAGGAGGAAGGAAGAATATTGGTTCAACCATAGAGAACACCACAAATGAAATTTACTATCCACAGTGGATTTATAATCTTCTAGAGGAAGGGGATGACCTACGAATCCATATTGGGGAAGAAGGAGATGGTAAAATTCCGAAGAAACTTGCAATTATAGGGCTATGGTGTATCCAGTGGCACCCGGTGGATCGTCCGTCCATAAAAATAACAGTTCAGATGTTAGAAGGAGACGGAGAAAGCTTGACCATGCCGCCTAATCCCTTTGTTTCTACAGGTCCTACAACTAAAAATGGAAGCATTCCGGCAAGACGACTAGAGTTGGAACCAATTGCTGAACTAGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase

Protein Analysis

613

Amino Acids

69.03

Weight (kDa)

8.55

Isoelectric Point (pI)

39.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 261, 1566
Acc36I ACCTGC 1 cut(s) 855
AccB1I GGYRCC 2 cut(s) 665, 1671
AccB7I CCANNNNNTGG 1 cut(s) 413
AciI CCGC 1 cut(s) 1745
AclWI GGATC 2 cut(s) 1365, 1689
AcoI YGGCCR 1 cut(s) 1338
AcsI RAATTY 9 cut(s) 104, 236, 965, 1118, 1171, 1320, 1429, 1542, 1626
AcyI GRCGYC 1 cut(s) 430
AdeI CACNNNGTG 1 cut(s) 1678
AfaI GTAC 5 cut(s) 526, 562, 619, 875, 1101
AfeI AGCGCT 1 cut(s) 790
AfiI CCNNNNNNNGG 4 cut(s) 413, 446, 1186, 1606
AflIII ACRYGT 2 cut(s) 342, 1440
AjiI CACGTC 1 cut(s) 1057
AjnI CCWGG 4 cut(s) 187, 454, 735, 1424
AjuI GAANNNNNNNTTGG 2 cut(s) 547, 579
AluBI AGCT 8 cut(s) 27, 402, 514, 1106, 1365, 1385, 1467, 1734
AluI AGCT 8 cut(s) 27, 402, 514, 1106, 1365, 1385, 1467, 1734
Alw21I GWGCWC 2 cut(s) 116, 1108
Alw26I GTCTC 1 cut(s) 1716
AlwI GGATC 2 cut(s) 1365, 1689
Ama87I CYCGRG 1 cut(s) 1484
Aor51HI AGCGCT 1 cut(s) 790
AoxI GGCC 3 cut(s) 142, 919, 1338
ApeKI GCWGC 6 cut(s) 217, 313, 402, 770, 1477, 1480
ApoI RAATTY 9 cut(s) 104, 236, 965, 1118, 1171, 1320, 1429, 1542, 1626
ArsI GACNNNNNNTTYG 2 cut(s) 1027, 1059
Asp700I GAANNNNTTC 2 cut(s) 955, 1175
AspLEI GCGC 2 cut(s) 252, 791
AspS9I GGNCC 5 cut(s) 143, 185, 919, 1392, 1769
AsuC2I CCSGG 2 cut(s) 146, 1676
AsuHPI GGTGA 2 cut(s) 461, 1232
AvaI CYCGRG 1 cut(s) 1484
AvaII GGWCC 3 cut(s) 185, 1392, 1769
BalI TGGCCA 1 cut(s) 1340
BanI GGYRCC 2 cut(s) 665, 1671
BanII GRGCYC 1 cut(s) 1108
BbsI GAAGAC 1 cut(s) 934
Bbv12I GWGCWC 2 cut(s) 116, 1108
BbvI GCAGC 6 cut(s) 229, 300, 389, 782, 1464, 1467
BccI CCATC 7 cut(s) 526, 629, 645, 1001, 1085, 1483, 1613
BciT130I CCWGG 4 cut(s) 189, 456, 737, 1426
BciVI GTATCC 2 cut(s) 1394, 1673
BclI TGATCA 2 cut(s) 136, 1252
BcnI CCSGG 2 cut(s) 146, 1676
BcoDI GTCTC 1 cut(s) 1716
BfaI CTAG 7 cut(s) 24, 230, 1298, 1386, 1574, 1808, 1832
BfmI CTRYAG 4 cut(s) 1158, 1380, 1462, 1764
BfoI RGCGCY 1 cut(s) 792
BfuAI ACCTGC 1 cut(s) 855
BfuI GTATCC 2 cut(s) 1394, 1673
BisI GCNGC 7 cut(s) 218, 314, 403, 771, 1478, 1481, 1745
BlsI GCNGC 7 cut(s) 219, 315, 404, 772, 1479, 1482, 1746
Bme1390I CCNGG 6 cut(s) 146, 189, 456, 737, 1426, 1676
Bme18I GGWCC 3 cut(s) 185, 1392, 1769
BmeT110I CYCGRG 1 cut(s) 1484
BmgBI CACGTC 1 cut(s) 1057
BmgT120I GGNCC 5 cut(s) 143, 185, 919, 1392, 1769
BmiI GGNNCC 6 cut(s) 667, 928, 1135, 1393, 1673, 1818
BmrFI CCNGG 6 cut(s) 146, 189, 456, 737, 1426, 1676
BmsI GCATC 1 cut(s) 184
BpiI GAAGAC 1 cut(s) 934
BpmI CTGGAG 1 cut(s) 1408
BpuEI CTTGAG 1 cut(s) 155
BpuMI CCSGG 2 cut(s) 146, 1676
BsaAI YACGTR 1 cut(s) 111
BsaHI GRCGYC 1 cut(s) 430
BsaXI ACNNNNNCTCC 2 cut(s) 1248, 1278
Bsc4I CCNNNNNNNGG 4 cut(s) 413, 446, 1186, 1606
Bse1I ACTGG 4 cut(s) 78, 562, 730, 1666
Bse3DI GCAATG 1 cut(s) 1404
BseBI CCWGG 4 cut(s) 189, 456, 737, 1426
BseGI GGATG 2 cut(s) 1253, 1591
BseLI CCNNNNNNNGG 4 cut(s) 413, 446, 1186, 1606
BseMI GCAATG 1 cut(s) 1404
BseNI ACTGG 4 cut(s) 78, 562, 730, 1666
BseXI GCAGC 6 cut(s) 229, 300, 389, 782, 1464, 1467
BsgI GTGCAG 1 cut(s) 149
BshFI GGCC 3 cut(s) 144, 921, 1340
BshNI GGYRCC 2 cut(s) 665, 1671
BsiHKAI GWGCWC 2 cut(s) 116, 1108
BsiHKCI CYCGRG 1 cut(s) 1484
BsiSI CCGG 3 cut(s) 146, 1676, 1796
BslFI GGGAC 2 cut(s) 422, 1405
BslI CCNNNNNNNGG 4 cut(s) 413, 446, 1186, 1606
BsmAI GTCTC 1 cut(s) 1716
BsmBI CGTCTC 1 cut(s) 1716
BsmFI GGGAC 2 cut(s) 422, 1405
BsmI GAATGC 3 cut(s) 203, 1479, 1791
BsnI GGCC 3 cut(s) 144, 921, 1340
BsoBI CYCGRG 1 cut(s) 1484
Bsp1286I GDGCHC 2 cut(s) 116, 1108
Bsp1407I TGTACA 2 cut(s) 524, 617
Bsp143I GATC 5 cut(s) 136, 898, 1252, 1357, 1681
Bsp19I CCATGG 2 cut(s) 1038, 1395
BspACI CCGC 1 cut(s) 1745
BspANI GGCC 3 cut(s) 144, 921, 1340
BspLI GGNNCC 6 cut(s) 667, 928, 1135, 1393, 1673, 1818
BspMAI CTGCAG 1 cut(s) 1162
BspMI ACCTGC 1 cut(s) 855
BspPI GGATC 2 cut(s) 1365, 1689
BspT107I GGYRCC 2 cut(s) 665, 1671
BsrDI GCAATG 1 cut(s) 1404
BsrGI TGTACA 2 cut(s) 524, 617
BsrI ACTGG 4 cut(s) 78, 562, 730, 1666
BssMI GATC 5 cut(s) 136, 898, 1252, 1357, 1681
BssNI GRCGYC 1 cut(s) 430
BssT1I CCWWGG 6 cut(s) 922, 1038, 1180, 1243, 1353, 1395
Bst2UI CCWGG 4 cut(s) 189, 456, 737, 1426
Bst4CI ACNGT 6 cut(s) 662, 674, 940, 995, 1557, 1705
Bst6I CTCTTC 2 cut(s) 509, 1008
BstACI GRCGYC 1 cut(s) 430
BstAPI GCANNNNNTGC 1 cut(s) 43
BstAUI TGTACA 2 cut(s) 524, 617
BstBAI YACGTR 1 cut(s) 111
BstC8I GCNNGC 3 cut(s) 100, 311, 1069
BstDEI CTNAG 1 cut(s) 999
BstDSI CCRYGG 2 cut(s) 1038, 1395
BstEII GGTNACC 1 cut(s) 449
BstF5I GGATG 2 cut(s) 1253, 1591
BstH2I RGCGCY 1 cut(s) 792
BstHHI GCGC 2 cut(s) 252, 791
BstKTI GATC 5 cut(s) 139, 901, 1255, 1360, 1684
BstMAI GTCTC 1 cut(s) 1716
BstMBI GATC 5 cut(s) 136, 898, 1252, 1357, 1681
BstMWI GCNNNNNNNGC 3 cut(s) 43, 172, 322
BstNI CCWGG 4 cut(s) 189, 456, 737, 1426
BstNSI RCATGY 1 cut(s) 346
BstPI GGTNACC 1 cut(s) 449
BstSCI CCNGG 6 cut(s) 144, 187, 454, 735, 1424, 1674
BstSFI CTRYAG 4 cut(s) 1158, 1380, 1462, 1764
BstV1I GCAGC 6 cut(s) 229, 300, 389, 782, 1464, 1467
BstV2I GAAGAC 1 cut(s) 934
BsuI GTATCC 2 cut(s) 1394, 1673
BsuRI GGCC 3 cut(s) 144, 921, 1340
BtgI CCRYGG 2 cut(s) 1038, 1395
BtgZI GCGATG 2 cut(s) 34, 147
BtrI CACGTC 1 cut(s) 1057
BtsCI GGATG 2 cut(s) 1253, 1591
BtsI GCAGTG 1 cut(s) 161
BtsIMutI CAGTG 6 cut(s) 161, 667, 679, 851, 1562, 1673
BveI ACCTGC 1 cut(s) 855
Cac8I GCNNGC 3 cut(s) 100, 311, 1069
CfoI GCGC 2 cut(s) 252, 791
Cfr13I GGNCC 5 cut(s) 143, 185, 919, 1392, 1769
CseI GACGC 2 cut(s) 254, 419
Csp6I GTAC 5 cut(s) 525, 561, 618, 874, 1100
CviAII CATG 5 cut(s) 343, 708, 1039, 1396, 1741
CviQI GTAC 5 cut(s) 525, 561, 618, 874, 1100
DdeI CTNAG 1 cut(s) 999
DpnI GATC 5 cut(s) 138, 900, 1254, 1359, 1683
DpnII GATC 5 cut(s) 136, 898, 1252, 1357, 1681
DraIII CACNNNGTG 1 cut(s) 1678
EaeI YGGCCR 1 cut(s) 1338
Eam1104I CTCTTC 2 cut(s) 509, 1008
EarI CTCTTC 2 cut(s) 509, 1008
Ecl136II GAGCTC 1 cut(s) 1106
Eco130I CCWWGG 6 cut(s) 922, 1038, 1180, 1243, 1353, 1395
Eco24I GRGCYC 1 cut(s) 1108
Eco32I GATATC 1 cut(s) 1276
Eco47I GGWCC 3 cut(s) 185, 1392, 1769
Eco47III AGCGCT 1 cut(s) 790
Eco53kI GAGCTC 1 cut(s) 1106
Eco88I CYCGRG 1 cut(s) 1484
Eco91I GGTNACC 1 cut(s) 449
EcoICRI GAGCTC 1 cut(s) 1106
EcoO109I RGGNCCY 1 cut(s) 1769
EcoO65I GGTNACC 1 cut(s) 449
EcoRI GAATTC 3 cut(s) 965, 1118, 1171
EcoRII CCWGG 4 cut(s) 187, 454, 735, 1424
EcoRV GATATC 1 cut(s) 1276
EcoT14I CCWWGG 6 cut(s) 922, 1038, 1180, 1243, 1353, 1395
EcoT38I GRGCYC 1 cut(s) 1108
ErhI CCWWGG 6 cut(s) 922, 1038, 1180, 1243, 1353, 1395
Esp3I CGTCTC 1 cut(s) 1716
FaeI CATG 5 cut(s) 346, 711, 1042, 1399, 1744
FalI AAGNNNNNCTT 6 cut(s) 939, 971, 943, 975, 1160, 1192
FaqI GGGAC 2 cut(s) 422, 1405
FatI CATG 5 cut(s) 342, 707, 1038, 1395, 1740
FbaI TGATCA 2 cut(s) 136, 1252
Fnu4HI GCNGC 7 cut(s) 218, 314, 403, 771, 1478, 1481, 1745
FokI GGATG 2 cut(s) 1260, 1598
FriOI GRGCYC 1 cut(s) 1108
Fsp4HI GCNGC 7 cut(s) 218, 314, 403, 771, 1478, 1481, 1745
FspBI CTAG 7 cut(s) 24, 230, 1298, 1386, 1574, 1808, 1832
GlaI GCGC 2 cut(s) 251, 790
GluI GCNGC 7 cut(s) 218, 314, 403, 771, 1478, 1481, 1745
GsuI CTGGAG 1 cut(s) 1408
HaeII RGCGCY 1 cut(s) 792
HaeIII GGCC 3 cut(s) 144, 921, 1340
HapII CCGG 3 cut(s) 146, 1676, 1796
HgaI GACGC 2 cut(s) 254, 419
HhaI GCGC 2 cut(s) 252, 791
Hin1I GRCGYC 1 cut(s) 430
Hin1II CATG 5 cut(s) 346, 711, 1042, 1399, 1744
Hin6I GCGC 2 cut(s) 250, 789
HinP1I GCGC 2 cut(s) 250, 789
HincII GTYRAC 1 cut(s) 1060
HindII GTYRAC 1 cut(s) 1060
HindIII AAGCTT 2 cut(s) 1363, 1732
HinfI GANTC 4 cut(s) 732, 811, 1260, 1596
HpaII CCGG 3 cut(s) 146, 1676, 1796
HphI GGTGA 2 cut(s) 461, 1232
Hpy166II GTNNAC 2 cut(s) 1060, 1114
Hpy188I TCNGA 6 cut(s) 207, 964, 1327, 1436, 1632, 1710
Hpy188III TCNNGA 3 cut(s) 269, 1486, 1574
Hpy8I GTNNAC 2 cut(s) 1060, 1114
HpyAV CCTTC 7 cut(s) 367, 945, 1186, 1494, 1574, 1607, 1712
HpyCH4III ACNGT 6 cut(s) 662, 674, 940, 995, 1557, 1705
HpyCH4IV ACGT 5 cut(s) 110, 419, 1056, 1062, 1440
HpyF10VI GCNNNNNNNGC 3 cut(s) 43, 172, 322
HpyF3I CTNAG 1 cut(s) 999
HpySE526I ACGT 5 cut(s) 110, 419, 1056, 1062, 1440
Hsp92I GRCGYC 1 cut(s) 430
Hsp92II CATG 5 cut(s) 346, 711, 1042, 1399, 1744
HspAI GCGC 2 cut(s) 250, 789
Ksp22I TGATCA 2 cut(s) 136, 1252
Kzo9I GATC 5 cut(s) 136, 898, 1252, 1357, 1681
LmnI GCTCC 3 cut(s) 119, 511, 926
Lsp1109I GCAGC 6 cut(s) 229, 300, 389, 782, 1464, 1467
LweI GCATC 1 cut(s) 184
MaeI CTAG 7 cut(s) 24, 230, 1298, 1386, 1574, 1808, 1832
MaeII ACGT 5 cut(s) 110, 419, 1056, 1062, 1440
MaeIII GTNAC 4 cut(s) 69, 345, 383, 449
MalI GATC 5 cut(s) 138, 900, 1254, 1359, 1683
MboI GATC 5 cut(s) 136, 898, 1252, 1357, 1681
MfeI CAATTG 1 cut(s) 1821
MhlI GDGCHC 2 cut(s) 116, 1108
MlsI TGGCCA 1 cut(s) 1340
MluNI TGGCCA 1 cut(s) 1340
MlyI GAGTC 1 cut(s) 820
MmeI TCCRAC 4 cut(s) 394, 578, 1057, 1794
Mox20I TGGCCA 1 cut(s) 1340
MroXI GAANNNNTTC 2 cut(s) 955, 1175
MscI TGGCCA 1 cut(s) 1340
MseI TTAA 3 cut(s) 818, 885, 1230
MslI CAYNNNNRTG 1 cut(s) 180
Msp20I TGGCCA 1 cut(s) 1340
MspA1I CMGCKG 1 cut(s) 402
MspI CCGG 3 cut(s) 146, 1676, 1796
MspR9I CCNGG 6 cut(s) 146, 189, 456, 737, 1426, 1676
MunI CAATTG 1 cut(s) 1821
Mva1269I GAATGC 3 cut(s) 203, 1479, 1791
MvaI CCWGG 4 cut(s) 189, 456, 737, 1426
MwoI GCNNNNNNNGC 3 cut(s) 43, 172, 322
NciI CCSGG 2 cut(s) 146, 1676
NcoI CCATGG 2 cut(s) 1038, 1395
NdeII GATC 5 cut(s) 136, 898, 1252, 1357, 1681
NlaIII CATG 5 cut(s) 346, 711, 1042, 1399, 1744
NlaIV GGNNCC 6 cut(s) 667, 928, 1135, 1393, 1673, 1818
NmeAIII GCCGAG 1 cut(s) 1191
NmuCI GTSAC 2 cut(s) 345, 449
NspI RCATGY 1 cut(s) 346
PaeR7I CTCGAG 1 cut(s) 1484
PciI ACATGT 1 cut(s) 342
PctI GAATGC 3 cut(s) 203, 1479, 1791
PdmI GAANNNNTTC 2 cut(s) 955, 1175
PfeI GAWTC 3 cut(s) 732, 1260, 1596
PflMI CCANNNNNTGG 1 cut(s) 413
PfoI TCCNGGA 1 cut(s) 1424
PkrI GCNGC 7 cut(s) 219, 315, 404, 772, 1479, 1482, 1746
PleI GAGTC 1 cut(s) 819
PpsI GAGTC 1 cut(s) 819
Ppu21I YACGTR 1 cut(s) 111
PpuMI RGGWCCY 1 cut(s) 1769
PscI ACATGT 1 cut(s) 342
PsiI TTATAA 2 cut(s) 261, 1566
Psp124BI GAGCTC 1 cut(s) 1108
Psp5II RGGWCCY 1 cut(s) 1769
Psp6I CCWGG 4 cut(s) 187, 454, 735, 1424
PspEI GGTNACC 1 cut(s) 449
PspGI CCWGG 4 cut(s) 187, 454, 735, 1424
PspN4I GGNNCC 6 cut(s) 667, 928, 1135, 1393, 1673, 1818
PspPI GGNCC 5 cut(s) 143, 185, 919, 1392, 1769
PspPPI RGGWCCY 1 cut(s) 1769
PstI CTGCAG 1 cut(s) 1162
PvuII CAGCTG 1 cut(s) 402
RsaI GTAC 5 cut(s) 526, 562, 619, 875, 1101
RsaNI GTAC 5 cut(s) 525, 561, 618, 874, 1100
RseI CAYNNNNRTG 1 cut(s) 180
SacI GAGCTC 1 cut(s) 1108
SaqAI TTAA 3 cut(s) 818, 885, 1230
SatI GCNGC 7 cut(s) 218, 314, 403, 771, 1478, 1481, 1745
Sau3AI GATC 5 cut(s) 136, 898, 1252, 1357, 1681
Sau96I GGNCC 5 cut(s) 143, 185, 919, 1392, 1769
SchI GAGTC 1 cut(s) 820
ScrFI CCNGG 6 cut(s) 146, 189, 456, 737, 1426, 1676
SduI GDGCHC 2 cut(s) 116, 1108
SfaNI GCATC 1 cut(s) 184
SfcI CTRYAG 4 cut(s) 1158, 1380, 1462, 1764
Sfr274I CTCGAG 1 cut(s) 1484
SinI GGWCC 3 cut(s) 185, 1392, 1769
SlaI CTCGAG 1 cut(s) 1484
SmiMI CAYNNNNRTG 1 cut(s) 180
SmlI CTYRAG 2 cut(s) 170, 1484
SmoI CTYRAG 2 cut(s) 170, 1484
SsiI CCGC 1 cut(s) 1745
SspI AATATT 2 cut(s) 1204, 1510
SspMI CTAG 7 cut(s) 24, 230, 1298, 1386, 1574, 1808, 1832
SstI GAGCTC 1 cut(s) 1108
StyD4I CCNGG 6 cut(s) 144, 187, 454, 735, 1424, 1674
StyI CCWWGG 6 cut(s) 922, 1038, 1180, 1243, 1353, 1395
TaaI ACNGT 6 cut(s) 662, 674, 940, 995, 1557, 1705
TaiI ACGT 5 cut(s) 113, 422, 1059, 1065, 1443
TaqI TCGA 4 cut(s) 375, 814, 1272, 1485
TatI WGTACW 2 cut(s) 524, 617
TauI GCSGC 1 cut(s) 1747
TfiI GAWTC 3 cut(s) 732, 1260, 1596
Tru1I TTAA 3 cut(s) 818, 885, 1230
Tru9I TTAA 3 cut(s) 818, 885, 1230
TscAI CASTG 6 cut(s) 168, 667, 679, 858, 1562, 1673
TseFI GTSAC 2 cut(s) 345, 449
TseI GCWGC 6 cut(s) 217, 313, 402, 770, 1477, 1480
Tsp45I GTSAC 2 cut(s) 345, 449
TspDTI ATGAA 5 cut(s) 591, 1041, 1138, 1143, 1554
TspGWI ACGGA 2 cut(s) 1677, 1740
TspRI CASTG 6 cut(s) 168, 667, 679, 858, 1562, 1673
Van91I CCANNNNNTGG 1 cut(s) 413
VpaK11BI GGWCC 3 cut(s) 185, 1392, 1769
XapI RAATTY 9 cut(s) 104, 236, 965, 1118, 1171, 1320, 1429, 1542, 1626
XbaI TCTAGA 1 cut(s) 1573
XceI RCATGY 1 cut(s) 346
XcmI CCANNNNNNNNNTGG 2 cut(s) 705, 929
XhoI CTCGAG 1 cut(s) 1484
XmnI GAANNNNTTC 2 cut(s) 955, 1175
XspI CTAG 7 cut(s) 24, 230, 1298, 1386, 1574, 1808, 1832
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.