Prupe.2G103400_v2.0.a1

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0000107
Physical Location & Seq
Forward (+)
15916723 .. 15919259
2537 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G103400.1

Sequence Viewer

Length: 1884 bp
ATGTGCTCTGAATCTGCAGGGATTACACTTTGTCAATGCTGCAGGGATTACACTTCCCATTTTTTTGTTAGAATAATGCTTCTGATCAATTTCTTATGCTGGTTGCTCATAGTAGTAGATGTCGATGCAGTCCATGGCGGAGTAGGCCTTGAAAGTTGCAGAGAAGCAAGATGTAAACCGGACGGCCCAGCCATCCGATTCCCATTTCGACTTAAAGGTAAGCAGCCAATCCATTGCGGTTACCATGGCTTTGATCTATCATGCACTAACGCCAGCCAGACTCTGCTCGAGATGCCATCTTCATCTAGTAACCTCTTCGTTGAAAAGATTAAGTACACATCTCAGGAGATTGAAATATATTACCACAATGATTACCCATCGGGAAATATTTTTTACTTCAGTTTATCTTCTTCTCCCTTACAATTTGTGCCTGGACCAGATAACTATAATTATACGCTATTCAGTTGTCCATATTCACCAGAAAGATCCAACATCGATTTTTGTGGGATGGAACTGGGACCTTACCACTTTGACATTCCTGAAAACCAGACATATGCTGTCAACGCTCAATGTTCTATTGATAGAATGCCCATAGAGTCCTGTACCAAGCTGCATGACTATACATCAATTCCAGACATATCACCAGTCTTGGCAATGAAAAAAACTATGAAGTTGCATTGGTCCAAACCATCATGTCGACATTGCAAAGAGATGGGCAAGGCGTGTAGATCAAAGATTAGTGAATATAGTCTTGCACATGTTCAGACTGCAGAAAGCGAATGTTTAGATTTCCCTGAAGGTAGTAGCCGTAGAGGGACACGCATAAAGATATCAGTTTGCACAGTTTCTGTGGCTCTTATTGCAGTGGGGGCTCTCATCATCTTCCATGTCTATATCTCCAACAAAACAGAGAAAACAAATCAGTTGAGAATTGAAAGATTTTTGGAAGATTACATAGCTCAGAAGCCAAGCAGATATTCCTATGCTGATATTAAGAGGATAACAAATCAATTCAAGGACAAGTTGGGGCAAGGGGCCTATGGAACAGTTTTTAAAGGGAAGCTTTCCTCTGAATTGCTTGTTGCTGTGAAAATCCTCAACAATTCAAATGAAAATAATGGAGAAGATTTTACAAATGAAATGGGAACAATGGGTCGCGTGCACCATGTCAATGTGGTGCGCTTGGTTGGCTTTTGTGCCGATGGGTTTATACGAGCTCTTGTGTATGAATTCTTACCAAATGGTTCATTACAAAACTTTTTATCATCAGCAGATAATAAAAATTCTTTCCTTGGTTGGGATAAGTTGCAAGATATTGCTTTAGGTATTGCCAAAGGAATTGAGTATCTTCACCAAGGGTGTGACCACCGAATCCTCCACTTCGACATCAAACCCCATAACATTTTGCTGGACCAGAATTTCACTCCGAAAGTTTCCGATTTTGGTCTAGCCAAGTTATGCGCAAGGGATCAAAGCGCAATATCCATGACAACCGTCAGGGGAACCATGGGCTACATTGCACCCGAAGTGTTCTCTAGGAACTTCGGTAGTGTGTCCTACAAGTCAGATGTCTATAGTTTCGGGACGTTGTTGCTGGAAATGGTTGGTGGCAGAAAAAACTTTAAGGTCATGGAGGACTCCACCGACCAAGTCTACTTTCCAGAATGGATTTATAACCTTTTAGAACAAGGAGACGACCTACGGATCCATATTGAGGATGAAGGAGATGCTAAAATTGCAAAGAAACTTGCCATTGTGGGTCTATGGTGCGTCCAATGGCACCCAATAGATCGTCCTCCAATGAAAGTTGTAGTTCAAATGTTAGAAAGAGAAGGTGACAATCTAACCATACCACCCAATCCTTTCTGCTCTACTTCGAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase Pkinase_Tyr

Protein Analysis

628

Amino Acids

70.73

Weight (kDa)

6.45

Isoelectric Point (pI)

40.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1674
Acc16I TGCGCA 1 cut(s) 1462
AccB1I GGYRCC 1 cut(s) 1779
AccI GTMKAC 2 cut(s) 697, 1653
AccII CGCG 1 cut(s) 1158
AciI CCGC 2 cut(s) 138, 237
AclWI GGATC 4 cut(s) 480, 1476, 1699, 1712
AcsI RAATTY 3 cut(s) 1229, 1282, 1417
AcuI CTGAAG 2 cut(s) 382, 816
AfaI GTAC 2 cut(s) 335, 604
AfiI CCNNNNNNNGG 2 cut(s) 1297, 1714
AflIII ACRYGT 1 cut(s) 757
AgsI TTSAA 7 cut(s) 152, 323, 353, 935, 1015, 1107, 1817
AjnI CCWGG 1 cut(s) 430
AjuI GAANNNNNNNTTGG 4 cut(s) 961, 993, 1641, 1673
AluBI AGCT 4 cut(s) 610, 959, 1063, 1217
AluI AGCT 4 cut(s) 610, 959, 1063, 1217
Alw21I GWGCWC 3 cut(s) 8, 1164, 1219
Alw26I GTCTC 1 cut(s) 1686
Alw44I GTGCAC 1 cut(s) 1160
AlwI GGATC 4 cut(s) 480, 1476, 1699, 1712
AlwNI CAGNNNCTG 2 cut(s) 283, 848
Ama87I CYCGRG 1 cut(s) 287
AoxI GGCC 3 cut(s) 145, 184, 1035
ApaLI GTGCAC 1 cut(s) 1160
ApeKI GCWGC 3 cut(s) 39, 223, 610
ApoI RAATTY 3 cut(s) 1229, 1282, 1417
AspLEI GCGC 3 cut(s) 1182, 1463, 1478
AspS9I GGNCC 6 cut(s) 185, 434, 518, 681, 1035, 1411
AsuHPI GGTGA 4 cut(s) 468, 633, 1343, 1847
AsuII TTCGAA 1 cut(s) 1877
AvaI CYCGRG 1 cut(s) 287
AvaII GGWCC 4 cut(s) 434, 518, 681, 1411
BaeGI GKGCMC 1 cut(s) 1164
BamHI GGATCC 1 cut(s) 1704
BanI GGYRCC 1 cut(s) 1779
BanII GRGCYC 2 cut(s) 874, 1219
Bbv12I GWGCWC 3 cut(s) 8, 1164, 1219
BbvI GCAGC 3 cut(s) 26, 235, 597
BccI CCATC 7 cut(s) 200, 304, 385, 502, 697, 706, 1196
BceAI ACGGC 2 cut(s) 199, 792
BciT130I CCWGG 1 cut(s) 432
BclI TGATCA 1 cut(s) 84
BcoDI GTCTC 1 cut(s) 1686
BfaI CTAG 3 cut(s) 306, 1448, 1536
BfmI CTRYAG 4 cut(s) 15, 40, 768, 1573
BisI GCNGC 3 cut(s) 40, 224, 611
BlsI GCNGC 3 cut(s) 41, 225, 612
Bme1390I CCNGG 1 cut(s) 432
Bme18I GGWCC 4 cut(s) 434, 518, 681, 1411
BmeT110I CYCGRG 1 cut(s) 287
BmgT120I GGNCC 6 cut(s) 185, 434, 518, 681, 1035, 1411
BmiI GGNNCC 5 cut(s) 519, 1036, 1504, 1706, 1781
BmrFI CCNGG 1 cut(s) 432
BmrI ACTGGG 1 cut(s) 524
BmsI GCATC 3 cut(s) 115, 282, 1717
BmuI ACTGGG 1 cut(s) 524
BoxI GACNNNNGTC 1 cut(s) 1493
Bpu14I TTCGAA 1 cut(s) 1877
Bsa29I ATCGAT 1 cut(s) 495
BsaJI CCNNGG 5 cut(s) 133, 244, 1291, 1354, 1506
BsaWI WCCGGW 1 cut(s) 178
Bsc4I CCNNNNNNNGG 2 cut(s) 1297, 1714
Bse1I ACTGG 2 cut(s) 519, 644
Bse3DI GCAATG 4 cut(s) 232, 660, 700, 1515
BseBI CCWGG 1 cut(s) 432
BseCI ATCGAT 1 cut(s) 495
BseDI CCNNGG 5 cut(s) 133, 244, 1291, 1354, 1506
BseGI GGATG 3 cut(s) 192, 513, 1723
BseLI CCNNNNNNNGG 2 cut(s) 1297, 1714
BseMI GCAATG 4 cut(s) 232, 660, 700, 1515
BseMII CTCAG 2 cut(s) 356, 974
BseNI ACTGG 2 cut(s) 519, 644
BseSI GKGCMC 1 cut(s) 1164
BseXI GCAGC 3 cut(s) 26, 235, 597
BseYI CCCAGC 1 cut(s) 187
Bsh1236I CGCG 1 cut(s) 1158
BshFI GGCC 3 cut(s) 147, 186, 1037
BshNI GGYRCC 1 cut(s) 1779
BshVI ATCGAT 1 cut(s) 495
BsiHKAI GWGCWC 3 cut(s) 8, 1164, 1219
BsiHKCI CYCGRG 1 cut(s) 287
BsiSI CCGG 1 cut(s) 179
BslFI GGGAC 3 cut(s) 531, 829, 1597
BslI CCNNNNNNNGG 2 cut(s) 1297, 1714
BsmAI GTCTC 1 cut(s) 1686
BsmBI CGTCTC 1 cut(s) 1686
BsmFI GGGAC 3 cut(s) 531, 829, 1597
BsmI GAATGC 1 cut(s) 591
BsnI GGCC 3 cut(s) 147, 186, 1037
BsoBI CYCGRG 1 cut(s) 287
Bsp119I TTCGAA 1 cut(s) 1877
Bsp1286I GDGCHC 4 cut(s) 8, 874, 1164, 1219
Bsp143I GATC 7 cut(s) 84, 253, 485, 728, 1468, 1704, 1789
Bsp19I CCATGG 3 cut(s) 133, 244, 1506
BspACI CCGC 2 cut(s) 138, 237
BspANI GGCC 3 cut(s) 147, 186, 1037
BspCNI CTCAG 2 cut(s) 355, 973
BspDI ATCGAT 1 cut(s) 495
BspFNI CGCG 1 cut(s) 1158
BspLI GGNNCC 5 cut(s) 519, 1036, 1504, 1706, 1781
BspMAI CTGCAG 3 cut(s) 19, 44, 772
BspPI GGATC 4 cut(s) 480, 1476, 1699, 1712
BspT104I TTCGAA 1 cut(s) 1877
BspT107I GGYRCC 1 cut(s) 1779
BsrDI GCAATG 4 cut(s) 232, 660, 700, 1515
BsrI ACTGG 2 cut(s) 519, 644
BssECI CCNNGG 5 cut(s) 133, 244, 1291, 1354, 1506
BssMI GATC 7 cut(s) 84, 253, 485, 728, 1468, 1704, 1789
BssT1I CCWWGG 5 cut(s) 133, 244, 1291, 1354, 1506
Bst2UI CCWGG 1 cut(s) 432
Bst4CI ACNGT 3 cut(s) 844, 1048, 1495
Bst6I CTCTTC 1 cut(s) 320
BstBI TTCGAA 1 cut(s) 1877
BstC8I GCNNGC 2 cut(s) 274, 1160
BstDEI CTNAG 2 cut(s) 342, 960
BstDSI CCRYGG 3 cut(s) 133, 244, 1506
BstEII GGTNACC 1 cut(s) 239
BstF5I GGATG 3 cut(s) 192, 513, 1723
BstFNI CGCG 1 cut(s) 1158
BstHHI GCGC 3 cut(s) 1182, 1463, 1478
BstKTI GATC 7 cut(s) 87, 256, 488, 731, 1471, 1707, 1792
BstMAI GTCTC 1 cut(s) 1686
BstMBI GATC 7 cut(s) 84, 253, 485, 728, 1468, 1704, 1789
BstMWI GCNNNNNNNGC 7 cut(s) 144, 292, 563, 860, 869, 1188, 1736
BstNI CCWGG 1 cut(s) 432
BstNSI RCATGY 1 cut(s) 761
BstPAI GACNNNNGTC 1 cut(s) 1493
BstPI GGTNACC 1 cut(s) 239
BstSCI CCNGG 1 cut(s) 430
BstSFI CTRYAG 4 cut(s) 15, 40, 768, 1573
BstSLI GKGCMC 1 cut(s) 1164
BstUI CGCG 1 cut(s) 1158
BstV1I GCAGC 3 cut(s) 26, 235, 597
BstX2I RGATCY 2 cut(s) 485, 1704
BstYI RGATCY 2 cut(s) 485, 1704
Bsu15I ATCGAT 1 cut(s) 495
BsuRI GGCC 3 cut(s) 147, 186, 1037
BsuTUI ATCGAT 1 cut(s) 495
BtgI CCRYGG 3 cut(s) 133, 244, 1506
BtsCI GGATG 3 cut(s) 192, 513, 1723
BtsI GCAGTG 1 cut(s) 870
BtsIMutI CAGTG 1 cut(s) 870
Cac8I GCNNGC 2 cut(s) 274, 1160
CaiI CAGNNNCTG 2 cut(s) 283, 848
CfoI GCGC 3 cut(s) 1182, 1463, 1478
Cfr13I GGNCC 6 cut(s) 185, 434, 518, 681, 1035, 1411
ClaI ATCGAT 1 cut(s) 495
CseI GACGC 1 cut(s) 1759
Csp6I GTAC 2 cut(s) 334, 603
CviQI GTAC 2 cut(s) 334, 603
DdeI CTNAG 2 cut(s) 342, 960
DpnI GATC 7 cut(s) 86, 255, 487, 730, 1470, 1706, 1791
DpnII GATC 7 cut(s) 84, 253, 485, 728, 1468, 1704, 1789
DraI TTTAAA 1 cut(s) 1054
Eam1104I CTCTTC 1 cut(s) 320
EarI CTCTTC 1 cut(s) 320
EciI GGCGGA 1 cut(s) 153
Ecl136II GAGCTC 1 cut(s) 1217
Eco130I CCWWGG 5 cut(s) 133, 244, 1291, 1354, 1506
Eco147I AGGCCT 1 cut(s) 147
Eco24I GRGCYC 2 cut(s) 874, 1219
Eco32I GATATC 1 cut(s) 831
Eco47I GGWCC 4 cut(s) 434, 518, 681, 1411
Eco53kI GAGCTC 1 cut(s) 1217
Eco57I CTGAAG 2 cut(s) 382, 816
Eco88I CYCGRG 1 cut(s) 287
Eco91I GGTNACC 1 cut(s) 239
EcoICRI GAGCTC 1 cut(s) 1217
EcoO109I RGGNCCY 2 cut(s) 518, 1035
EcoO65I GGTNACC 1 cut(s) 239
EcoRI GAATTC 1 cut(s) 1229
EcoRII CCWGG 1 cut(s) 430
EcoRV GATATC 1 cut(s) 831
EcoT14I CCWWGG 5 cut(s) 133, 244, 1291, 1354, 1506
EcoT38I GRGCYC 2 cut(s) 874, 1219
ErhI CCWWGG 5 cut(s) 133, 244, 1291, 1354, 1506
Esp3I CGTCTC 1 cut(s) 1686
FalI AAGNNNNNCTT 2 cut(s) 1047, 1079
FaqI GGGAC 3 cut(s) 531, 829, 1597
FauNDI CATATG 1 cut(s) 553
FbaI TGATCA 1 cut(s) 84
FblI GTMKAC 2 cut(s) 697, 1653
Fnu4HI GCNGC 3 cut(s) 40, 224, 611
FokI GGATG 3 cut(s) 179, 520, 1730
FriOI GRGCYC 2 cut(s) 874, 1219
Fsp4HI GCNGC 3 cut(s) 40, 224, 611
FspBI CTAG 3 cut(s) 306, 1448, 1536
FspI TGCGCA 1 cut(s) 1462
GlaI GCGC 3 cut(s) 1181, 1462, 1477
GluI GCNGC 3 cut(s) 40, 224, 611
GsaI CCCAGC 1 cut(s) 191
HaeIII GGCC 3 cut(s) 147, 186, 1037
HapII CCGG 1 cut(s) 179
HgaI GACGC 1 cut(s) 1759
HhaI GCGC 3 cut(s) 1182, 1463, 1478
Hin6I GCGC 3 cut(s) 1180, 1461, 1476
HinP1I GCGC 3 cut(s) 1180, 1461, 1476
HincII GTYRAC 2 cut(s) 562, 698
HindII GTYRAC 2 cut(s) 562, 698
HindIII AAGCTT 1 cut(s) 1061
HinfI GANTC 6 cut(s) 11, 198, 280, 596, 1371, 1637
HpaII CCGG 1 cut(s) 179
HphI GGTGA 4 cut(s) 468, 633, 1343, 1847
Hpy166II GTNNAC 6 cut(s) 176, 336, 562, 698, 1162, 1654
Hpy188I TCNGA 9 cut(s) 10, 84, 197, 765, 963, 1072, 1428, 1438, 1567
Hpy188III TCNNGA 7 cut(s) 289, 344, 381, 539, 632, 1582, 1661
Hpy8I GTNNAC 6 cut(s) 176, 336, 562, 698, 1162, 1654
HpyAV CCTTC 3 cut(s) 791, 1715, 1826
HpyCH4III ACNGT 3 cut(s) 844, 1048, 1495
HpyCH4IV ACGT 1 cut(s) 1586
HpyF10VI GCNNNNNNNGC 7 cut(s) 144, 292, 563, 860, 869, 1188, 1736
HpyF3I CTNAG 2 cut(s) 342, 960
HpySE526I ACGT 1 cut(s) 1586
HspAI GCGC 3 cut(s) 1180, 1461, 1476
Ksp22I TGATCA 1 cut(s) 84
Kzo9I GATC 7 cut(s) 84, 253, 485, 728, 1468, 1704, 1789
Lsp1109I GCAGC 3 cut(s) 26, 235, 597
LweI GCATC 3 cut(s) 115, 282, 1717
MaeI CTAG 3 cut(s) 306, 1448, 1536
MaeII ACGT 1 cut(s) 1586
MaeIII GTNAC 4 cut(s) 239, 308, 1361, 1835
MalI GATC 7 cut(s) 86, 255, 487, 730, 1470, 1706, 1791
MboI GATC 7 cut(s) 84, 253, 485, 728, 1468, 1704, 1789
MboII GAAGA 8 cut(s) 291, 307, 399, 402, 874, 959, 1136, 1340
MflI RGATCY 2 cut(s) 485, 1704
MhlI GDGCHC 4 cut(s) 8, 874, 1164, 1219
MlyI GAGTC 3 cut(s) 274, 605, 1631
MmeI TCCRAC 2 cut(s) 513, 924
MnlI CCTC 9 cut(s) 323, 806, 990, 1078, 1106, 1385, 1627, 1708, 1806
MseI TTAA 5 cut(s) 213, 330, 993, 1053, 1623
MslI CAYNNNNRTG 1 cut(s) 1170
MspI CCGG 1 cut(s) 179
MspR9I CCNGG 1 cut(s) 432
Mva1269I GAATGC 1 cut(s) 591
MvaI CCWGG 1 cut(s) 432
MvnI CGCG 1 cut(s) 1158
MwoI GCNNNNNNNGC 7 cut(s) 144, 292, 563, 860, 869, 1188, 1736
NcoI CCATGG 3 cut(s) 133, 244, 1506
NdeI CATATG 1 cut(s) 553
NdeII GATC 7 cut(s) 84, 253, 485, 728, 1468, 1704, 1789
NlaIV GGNNCC 5 cut(s) 519, 1036, 1504, 1706, 1781
NmuCI GTSAC 2 cut(s) 1361, 1835
NsbI TGCGCA 1 cut(s) 1462
NspI RCATGY 1 cut(s) 761
NspV TTCGAA 1 cut(s) 1877
PaeR7I CTCGAG 1 cut(s) 287
PceI AGGCCT 1 cut(s) 147
PciI ACATGT 1 cut(s) 757
PctI GAATGC 1 cut(s) 591
PfeI GAWTC 3 cut(s) 11, 198, 1371
PflFI GACNNNGTC 1 cut(s) 1649
PkrI GCNGC 3 cut(s) 41, 225, 612
PleI GAGTC 3 cut(s) 274, 604, 1631
PpsI GAGTC 3 cut(s) 274, 604, 1631
PpuMI RGGWCCY 1 cut(s) 518
PscI ACATGT 1 cut(s) 757
PshAI GACNNNNGTC 1 cut(s) 1493
PsiI TTATAA 1 cut(s) 1674
Psp124BI GAGCTC 1 cut(s) 1219
Psp5II RGGWCCY 1 cut(s) 518
Psp6I CCWGG 1 cut(s) 430
PspEI GGTNACC 1 cut(s) 239
PspFI CCCAGC 1 cut(s) 187
PspGI CCWGG 1 cut(s) 430
PspN4I GGNNCC 5 cut(s) 519, 1036, 1504, 1706, 1781
PspPI GGNCC 6 cut(s) 185, 434, 518, 681, 1035, 1411
PspPPI RGGWCCY 1 cut(s) 518
PstI CTGCAG 3 cut(s) 19, 44, 772
PstNI CAGNNNCTG 2 cut(s) 283, 848
PsuI RGATCY 2 cut(s) 485, 1704
PsyI GACNNNGTC 1 cut(s) 1649
RsaI GTAC 2 cut(s) 335, 604
RsaNI GTAC 2 cut(s) 334, 603
RseI CAYNNNNRTG 1 cut(s) 1170
SacI GAGCTC 1 cut(s) 1219
SalI GTCGAC 1 cut(s) 696
SaqAI TTAA 5 cut(s) 213, 330, 993, 1053, 1623
SatI GCNGC 3 cut(s) 40, 224, 611
Sau3AI GATC 7 cut(s) 84, 253, 485, 728, 1468, 1704, 1789
Sau96I GGNCC 6 cut(s) 185, 434, 518, 681, 1035, 1411
SchI GAGTC 3 cut(s) 274, 605, 1631
ScrFI CCNGG 1 cut(s) 432
SduI GDGCHC 4 cut(s) 8, 874, 1164, 1219
SfaNI GCATC 3 cut(s) 115, 282, 1717
SfcI CTRYAG 4 cut(s) 15, 40, 768, 1573
Sfr274I CTCGAG 1 cut(s) 287
SfuI TTCGAA 1 cut(s) 1877
SinI GGWCC 4 cut(s) 434, 518, 681, 1411
SlaI CTCGAG 1 cut(s) 287
SmiMI CAYNNNNRTG 1 cut(s) 1170
SmlI CTYRAG 1 cut(s) 287
SmoI CTYRAG 1 cut(s) 287
SseBI AGGCCT 1 cut(s) 147
SsiI CCGC 2 cut(s) 138, 237
SspI AATATT 1 cut(s) 388
SspMI CTAG 3 cut(s) 306, 1448, 1536
SstI GAGCTC 1 cut(s) 1219
StuI AGGCCT 1 cut(s) 147
StyD4I CCNGG 1 cut(s) 430
StyI CCWWGG 5 cut(s) 133, 244, 1291, 1354, 1506
TaaI ACNGT 3 cut(s) 844, 1048, 1495
TaiI ACGT 1 cut(s) 1589
TaqI TCGA 7 cut(s) 123, 208, 288, 495, 697, 1383, 1877
TatI WGTACW 1 cut(s) 333
TfiI GAWTC 3 cut(s) 11, 198, 1371
Tru1I TTAA 5 cut(s) 213, 330, 993, 1053, 1623
Tru9I TTAA 5 cut(s) 213, 330, 993, 1053, 1623
TscAI CASTG 1 cut(s) 870
TseFI GTSAC 2 cut(s) 1361, 1835
TseI GCWGC 3 cut(s) 39, 223, 610
Tsp45I GTSAC 2 cut(s) 1361, 1835
TspDTI ATGAA 9 cut(s) 291, 671, 683, 1125, 1152, 1236, 1242, 1734, 1817
TspGWI ACGGA 1 cut(s) 1717
TspRI CASTG 1 cut(s) 870
Tth111I GACNNNGTC 1 cut(s) 1649
VneI GTGCAC 1 cut(s) 1160
VpaK11BI GGWCC 4 cut(s) 434, 518, 681, 1411
XapI RAATTY 3 cut(s) 1229, 1282, 1417
XceI RCATGY 1 cut(s) 761
XhoI CTCGAG 1 cut(s) 287
XmiI GTMKAC 2 cut(s) 697, 1653
XspI CTAG 3 cut(s) 306, 1448, 1536
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.