Rorug01G0109100

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000107
Physical Location & Seq
Reverse (-)
19556170 .. 19560695
4526 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0109100.1

Sequence Viewer

Length: 2241 bp
ATGAGTGCAGATCATCCTGGTAAAATTACAGAGCTTAGCTCTCCGTGGTGTGGCCGGAAATGCTGCCAAAATCCTTACAGGTCCGGTTTTGTAGTTTCTAGTGCAGAAAATTGCACCGATTTTTTGAAGGCCTTCAATTCCGAACCAGCTCTTTCAGAGCAAGATCTCTTTCCTCGCCGGAAAGAGATCGGAGAGGGGAGGGGAGGGGGGAGAGAGAAAGTGTTTCGTGATTATGAAAAAAATTTTAAGGTTAAAAGTGACATTTTATCTTTAAATTTGGCATTTGGTCAAAATCCCTTCATATCAAGGAGACCTTCCTTCCGCGCCCTCGATCACCCTCACGTCTGGCCCTTCCAGTTTTGGCAAGAGACGGATAAAGCAGCTCATCTTGTGAGACAATACTTCTTCAATAATCTATATGATCGATTGAGCACACGCCCCTTTCTCAGTCTTATTGAAAAGAAATGGTTGGCTTTTCAGTTACTTCTTGCTGTGAAACAGTGCCATGACAAAGGAATATGTCACGGTGATATTAAGTGCGAGAATGTGCTGGTGACTTCTTGGAATTGGCTCTATCTTGCTGACTTTGCATCCTTCAAACCCACTTACATTCCATATGATGGCCCTTCTGATTTCTCGTTTTTCTACGACACTGGAGGAAGAAGGCTTTGTTATTGCTCCCAAGATGATTACATAATTAGTCTCTTCACAACTTTCAGAGATTTTATGAGCATGGAGGTTGCACTTTGCCAGAGTGTTTTTCCTGAGATACTGAAACAAATGATGAGCAATAGGTCAACTCAGGACACTAGCACTGGACATGGAACTCCTTCAAACATCCATGCTGTTAGAGGTAAATCTTCTCAGGACATGATTGCAATGCAGAACATGAATTTGACAAAGGGCTCACTGGGAAAGAAAGTAGAGATGGATAAAGGTTTCAAACGCGATCAATTTGAACTTCTCGGTGATATCAATACCCTTCTTAGAGATGTTAAACAAAGTAATCATTATTCTAATATGAAGCCAATGGTGGAGGACAACACTAATTCTGCATTTTCCCAAAATCTTGGAAACTATGGCATGCAATCTCCTGGTGAATTACTTCAGACTATCTCCCATGCGTTTAGGAGAAATGATCATCCTTTTCTAAAAAAGATTGCAATGAATGATTTGAATTCATTGATATCCAAGTATGACAGCCAGTCAGATACCTTTGGTATGCCTTTTTTACCATTACCTGAAGACAGTTTGAGATGTGAGGGCATGGTTCTGATTACCTCTTTGCTATGTTCCTGCATACGCAATGTCAAATTGCCTCATTTAAGGAGGAGGGCGATACTTTTGCTGAAGTCATCTGCATTGTATATTGATGATGAAAACCGGTTGCAGCGTGTAATTCCATATGTTGTTGCAATGCTTTCAGATCAAGCTGCAATTGTGCATTGTGCAGCCTTGGAGATATTATGTGACATTCTCCCTTTAGTTCGAGATTTTCCTCCTAGTGATGCAAAAAAAATTCCGGAGTATATTCTGCCAATGCTTTCTATGCTTCCTGATGATACAGAGGAAAGTGTGAGGATATGTTATGCCAGTAATATAGCTAAGCTGGCACTAACTGCTTATGGTTTCTTAGTTCACTCAATAACCTTGAGTGAGGCTGGTGTGCTTGATGAATTAAGTTCTCCAAAGAAGCTACTGTCATCATCTAGTGAGACATCTGGTCAGCTCCACAAGGTAAATAATGATGCACAGCTTGCCCAGTTGAGGAAGTCCATAGCTGAAGTCATTCAAGAGTTTGTTATGGGTCCCAAGCAAACTCCCAATATCAGGAGAGCACTCCTTCAGGATATCAGCAATCTATGCTGCTTCTTTGGCCAGAGGCAGAAGGCTGTTATTGTCAATGCATTGGACTGTTTGGCCATTTTGTGCAAAAGTGGTTACTTGCGCAAGAGGATACTCCTGGAAATGATTGAGCGTGCATTTCCATTGTTATGCTATCCTAGTCAATGGGTAAGAAGACAGCCAGCATCTCTAGCTTCTGAGAAGGCTCTCCTTTCATGTTTGAAGCCTCCTGTCTCAAGACAGGTATTTTACCAAGTTCTAGAAAATGCAAGGAGTACAGAGTCACTACAGACATGTTGCAAAGACAGAGAAAGATATGGTACAATTCTTGGCCTCAATCTAAACAATGGGAAAGTACTCGCGCTTTATGTGGCCACAGGGAAGTACTGTGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase

Protein Analysis

746

Amino Acids

84.57

Weight (kDa)

8.62

Isoelectric Point (pI)

51.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 60 - 197 3.8e-11 Protein kinase domain
VPS15-like_hel PF22956 426 - 629 1.1e-54 VPS15-like, helical domain
VPS15-like_hel PF22956 630 - 676 2.5e-11 VPS15-like, helical domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1949
AccB7I CCANNNNNTGG 1 cut(s) 620
AccII CGCG 3 cut(s) 324, 948, 2207
AccIII TCCGGA 1 cut(s) 1522
AciI CCGC 1 cut(s) 322
AcoI YGGCCR 4 cut(s) 52, 1876, 1920, 2217
AcsI RAATTY 5 cut(s) 241, 274, 892, 1177, 1518
AcuI CTGAAG 5 cut(s) 1091, 1263, 1370, 1803, 1829
AfaI GTAC 4 cut(s) 2122, 2167, 2202, 2231
AfiI CCNNNNNNNGG 4 cut(s) 50, 620, 1767, 1830
AflIII ACRYGT 1 cut(s) 2138
AgeI ACCGGT 1 cut(s) 1383
AhdI GACNNNNNGTC 2 cut(s) 1204, 1722
AjiI CACGTC 1 cut(s) 343
AjnI CCWGG 3 cut(s) 16, 1093, 1962
Alw21I GWGCWC 2 cut(s) 434, 1840
Alw26I GTCTC 6 cut(s) 304, 362, 388, 707, 1709, 2083
Aor13HI TCCGGA 1 cut(s) 1522
AoxI GGCC 8 cut(s) 52, 129, 347, 622, 1876, 1920, 2176, 2217
ApeKI GCWGC 6 cut(s) 63, 380, 1390, 1433, 1451, 1866
ApoI RAATTY 5 cut(s) 241, 274, 892, 1177, 1518
AsiGI ACCGGT 1 cut(s) 1383
Asp700I GAANNNNTTC 4 cut(s) 131, 829, 1104, 1788
AspLEI GCGC 3 cut(s) 326, 1950, 2209
AspS9I GGNCC 4 cut(s) 81, 348, 623, 1808
AsuHPI GGTGA 5 cut(s) 326, 539, 565, 980, 1109
AvaII GGWCC 2 cut(s) 81, 1808
BalI TGGCCA 3 cut(s) 1878, 1922, 2219
BanII GRGCYC 1 cut(s) 908
BbsI GAAGAC 2 cut(s) 1251, 2026
Bbv12I GWGCWC 2 cut(s) 434, 1840
BbvI GCAGC 6 cut(s) 50, 392, 1402, 1420, 1463, 1853
BccI CCATC 2 cut(s) 614, 922
BcgI CGANNNNNNTGC 2 cut(s) 1327, 1361
BciT130I CCWGG 3 cut(s) 18, 1095, 1964
BciVI GTATCC 1 cut(s) 1950
BclI TGATCA 1 cut(s) 1138
BcoDI GTCTC 6 cut(s) 304, 362, 388, 707, 1709, 2083
BfaI CTAG 7 cut(s) 99, 810, 1503, 1710, 2004, 2036, 2105
BfmI CTRYAG 1 cut(s) 2132
BfuI GTATCC 1 cut(s) 1950
BglII AGATCT 1 cut(s) 163
BisI GCNGC 6 cut(s) 64, 381, 1391, 1434, 1452, 1867
BlpI GCTNAGC 2 cut(s) 35, 1605
BlsI GCNGC 6 cut(s) 65, 382, 1392, 1435, 1453, 1868
BmcAI AGTACT 2 cut(s) 2202, 2231
Bme1390I CCNGG 3 cut(s) 18, 1095, 1964
Bme18I GGWCC 2 cut(s) 81, 1808
BmeRI GACNNNNNGTC 2 cut(s) 1204, 1722
BmgBI CACGTC 1 cut(s) 343
BmgT120I GGNCC 4 cut(s) 81, 348, 623, 1808
BmiI GGNNCC 2 cut(s) 1809, 1810
BmrFI CCNGG 3 cut(s) 18, 1095, 1964
BmrI ACTGGG 2 cut(s) 920, 1756
BmsI GCATC 4 cut(s) 599, 1498, 1738, 2039
BmuI ACTGGG 2 cut(s) 920, 1756
BpiI GAAGAC 2 cut(s) 1251, 2026
BplI GAGNNNNNCTC 2 cut(s) 23, 55
BpmI CTGGAG 1 cut(s) 675
Bpu1102I GCTNAGC 2 cut(s) 35, 1605
BpuEI CTTGAG 2 cut(s) 1672, 2065
Bsa29I ATCGAT 1 cut(s) 424
BsaI GGTCTC 1 cut(s) 304
BsaJI CCNNGG 2 cut(s) 44, 1455
BsaWI WCCGGW 3 cut(s) 83, 1383, 1522
Bsc4I CCNNNNNNNGG 4 cut(s) 50, 620, 1767, 1830
Bse118I RCCGGY 1 cut(s) 1383
Bse1I ACTGG 7 cut(s) 355, 658, 820, 915, 1204, 1593, 1762
Bse3DI GCAATG 4 cut(s) 885, 1170, 1312, 1422
BseAI TCCGGA 1 cut(s) 1522
BseBI CCWGG 3 cut(s) 18, 1095, 1964
BseCI ATCGAT 1 cut(s) 424
BseDI CCNNGG 2 cut(s) 44, 1455
BseGI GGATG 4 cut(s) 13, 590, 837, 1141
BseLI CCNNNNNNNGG 4 cut(s) 50, 620, 1767, 1830
BseMI GCAATG 4 cut(s) 885, 1170, 1312, 1422
BseMII CTCAG 5 cut(s) 460, 756, 815, 878, 2034
BseNI ACTGG 7 cut(s) 355, 658, 820, 915, 1204, 1593, 1762
BseRI GAGGAG 1 cut(s) 1345
BseXI GCAGC 6 cut(s) 50, 392, 1402, 1420, 1463, 1853
BsgI GTGCAG 3 cut(s) 27, 123, 1470
Bsh1236I CGCG 3 cut(s) 324, 948, 2207
BshFI GGCC 8 cut(s) 54, 131, 349, 624, 1878, 1922, 2178, 2219
BshTI ACCGGT 1 cut(s) 1383
BshVI ATCGAT 1 cut(s) 424
BsiHKAI GWGCWC 2 cut(s) 434, 1840
BsiSI CCGG 5 cut(s) 55, 84, 178, 1384, 1523
BslFI GGGAC 1 cut(s) 1794
BslI CCNNNNNNNGG 4 cut(s) 50, 620, 1767, 1830
BsmAI GTCTC 6 cut(s) 304, 362, 388, 707, 1709, 2083
BsmBI CGTCTC 1 cut(s) 362
BsmFI GGGAC 1 cut(s) 1794
BsnI GGCC 8 cut(s) 54, 131, 349, 624, 1878, 1922, 2178, 2219
Bso31I GGTCTC 1 cut(s) 304
Bsp1286I GDGCHC 3 cut(s) 434, 908, 1840
Bsp13I TCCGGA 1 cut(s) 1522
Bsp143I GATC 8 cut(s) 10, 163, 186, 331, 421, 949, 1138, 1426
Bsp1720I GCTNAGC 2 cut(s) 35, 1605
BspACI CCGC 1 cut(s) 322
BspANI GGCC 8 cut(s) 54, 131, 349, 624, 1878, 1922, 2178, 2219
BspCNI CTCAG 5 cut(s) 459, 757, 814, 877, 2035
BspDI ATCGAT 1 cut(s) 424
BspEI TCCGGA 1 cut(s) 1522
BspFNI CGCG 3 cut(s) 324, 948, 2207
BspLI GGNNCC 2 cut(s) 1809, 1810
BspTNI GGTCTC 1 cut(s) 304
BsrDI GCAATG 4 cut(s) 885, 1170, 1312, 1422
BsrFI RCCGGY 1 cut(s) 1383
BsrI ACTGG 7 cut(s) 355, 658, 820, 915, 1204, 1593, 1762
BssAI RCCGGY 1 cut(s) 1383
BssECI CCNNGG 2 cut(s) 44, 1455
BssMI GATC 8 cut(s) 10, 163, 186, 331, 421, 949, 1138, 1426
BssT1I CCWWGG 1 cut(s) 1455
Bst2UI CCWGG 3 cut(s) 18, 1095, 1964
Bst4CI ACNGT 6 cut(s) 501, 527, 1250, 1701, 1916, 2234
Bst6I CTCTTC 1 cut(s) 710
BstAPI GCANNNNNTGC 3 cut(s) 1619, 1757, 1863
BstC8I GCNNGC 5 cut(s) 1085, 1611, 1758, 1980, 2028
BstDEI CTNAG 9 cut(s) 35, 446, 765, 801, 864, 986, 1605, 1633, 2043
BstDSI CCRYGG 1 cut(s) 44
BstF5I GGATG 4 cut(s) 13, 590, 837, 1141
BstFNI CGCG 3 cut(s) 324, 948, 2207
BstHHI GCGC 3 cut(s) 326, 1950, 2209
BstKTI GATC 8 cut(s) 13, 166, 189, 334, 424, 952, 1141, 1429
BstMAI GTCTC 6 cut(s) 304, 362, 388, 707, 1709, 2083
BstMBI GATC 8 cut(s) 10, 163, 186, 331, 421, 949, 1138, 1426
BstMWI GCNNNNNNNGC 9 cut(s) 60, 587, 1549, 1610, 1619, 1757, 1863, 1875, 2036
BstNI CCWGG 3 cut(s) 18, 1095, 1964
BstNSI RCATGY 2 cut(s) 1087, 2142
BstSCI CCNGG 3 cut(s) 16, 1093, 1962
BstSFI CTRYAG 1 cut(s) 2132
BstUI CGCG 3 cut(s) 324, 948, 2207
BstV1I GCAGC 6 cut(s) 50, 392, 1402, 1420, 1463, 1853
BstV2I GAAGAC 2 cut(s) 1251, 2026
BstX2I RGATCY 1 cut(s) 163
BstXI CCANNNNNNTGG 1 cut(s) 1070
BstYI RGATCY 1 cut(s) 163
Bsu15I ATCGAT 1 cut(s) 424
BsuI GTATCC 1 cut(s) 1950
BsuRI GGCC 8 cut(s) 54, 131, 349, 624, 1878, 1922, 2178, 2219
BsuTUI ATCGAT 1 cut(s) 424
BtgI CCRYGG 1 cut(s) 44
BtrI CACGTC 1 cut(s) 343
BtsCI GGATG 4 cut(s) 13, 590, 837, 1141
BtsIMutI CAGTG 4 cut(s) 506, 651, 813, 908
Cac8I GCNNGC 5 cut(s) 1085, 1611, 1758, 1980, 2028
CfoI GCGC 3 cut(s) 326, 1950, 2209
Cfr10I RCCGGY 1 cut(s) 1383
Cfr13I GGNCC 4 cut(s) 81, 348, 623, 1808
ClaI ATCGAT 1 cut(s) 424
Csp6I GTAC 4 cut(s) 2121, 2166, 2201, 2230
CspAI ACCGGT 1 cut(s) 1383
CviQI GTAC 4 cut(s) 2121, 2166, 2201, 2230
DdeI CTNAG 9 cut(s) 35, 446, 765, 801, 864, 986, 1605, 1633, 2043
DpnI GATC 8 cut(s) 12, 165, 188, 333, 423, 951, 1140, 1428
DpnII GATC 8 cut(s) 10, 163, 186, 331, 421, 949, 1138, 1426
DraI TTTAAA 1 cut(s) 273
DriI GACNNNNNGTC 2 cut(s) 1204, 1722
EaeI YGGCCR 4 cut(s) 52, 1876, 1920, 2217
Eam1104I CTCTTC 1 cut(s) 710
Eam1105I GACNNNNNGTC 2 cut(s) 1204, 1722
EarI CTCTTC 1 cut(s) 710
Eco130I CCWWGG 1 cut(s) 1455
Eco147I AGGCCT 1 cut(s) 131
Eco24I GRGCYC 1 cut(s) 908
Eco31I GGTCTC 1 cut(s) 304
Eco32I GATATC 3 cut(s) 973, 1188, 1852
Eco47I GGWCC 2 cut(s) 81, 1808
Eco57I CTGAAG 5 cut(s) 1091, 1263, 1370, 1803, 1829
EcoO109I RGGNCCY 1 cut(s) 1808
EcoRI GAATTC 1 cut(s) 1177
EcoRII CCWGG 3 cut(s) 16, 1093, 1962
EcoRV GATATC 3 cut(s) 973, 1188, 1852
EcoT14I CCWWGG 1 cut(s) 1455
EcoT22I ATGCAT 1 cut(s) 1909
EcoT38I GRGCYC 1 cut(s) 908
ErhI CCWWGG 1 cut(s) 1455
Esp3I CGTCTC 1 cut(s) 362
FalI AAGNNNNNCTT 2 cut(s) 298, 330
FaqI GGGAC 1 cut(s) 1794
FauNDI CATATG 2 cut(s) 616, 1405
FbaI TGATCA 1 cut(s) 1138
Fnu4HI GCNGC 6 cut(s) 64, 381, 1391, 1434, 1452, 1867
FokI GGATG 3 cut(s) 577, 824, 1128
FriOI GRGCYC 1 cut(s) 908
Fsp4HI GCNGC 6 cut(s) 64, 381, 1391, 1434, 1452, 1867
FspBI CTAG 7 cut(s) 99, 810, 1503, 1710, 2004, 2036, 2105
FspI TGCGCA 1 cut(s) 1949
GlaI GCGC 3 cut(s) 325, 1949, 2208
GluI GCNGC 6 cut(s) 64, 381, 1391, 1434, 1452, 1867
GsuI CTGGAG 1 cut(s) 675
HaeIII GGCC 8 cut(s) 54, 131, 349, 624, 1878, 1922, 2178, 2219
HapII CCGG 5 cut(s) 55, 84, 178, 1384, 1523
HhaI GCGC 3 cut(s) 326, 1950, 2209
Hin6I GCGC 3 cut(s) 324, 1948, 2207
HinP1I GCGC 3 cut(s) 324, 1948, 2207
HincII GTYRAC 1 cut(s) 798
HindII GTYRAC 1 cut(s) 798
HinfI GANTC 1 cut(s) 2126
HpaII CCGG 5 cut(s) 55, 84, 178, 1384, 1523
HphI GGTGA 5 cut(s) 326, 539, 565, 980, 1109
Hpy166II GTNNAC 2 cut(s) 798, 1639
Hpy8I GTNNAC 2 cut(s) 798, 1639
HpyCH4III ACNGT 6 cut(s) 501, 527, 1250, 1701, 1916, 2234
HpyCH4IV ACGT 1 cut(s) 342
HpyF10VI GCNNNNNNNGC 9 cut(s) 60, 587, 1549, 1610, 1619, 1757, 1863, 1875, 2036
HpyF3I CTNAG 9 cut(s) 35, 446, 765, 801, 864, 986, 1605, 1633, 2043
HpySE526I ACGT 1 cut(s) 342
HspAI GCGC 3 cut(s) 324, 1948, 2207
KflI GGGWCCC 1 cut(s) 1808
Kpn2I TCCGGA 1 cut(s) 1522
Ksp22I TGATCA 1 cut(s) 1138
Kzo9I GATC 8 cut(s) 10, 163, 186, 331, 421, 949, 1138, 1426
LmnI GCTCC 2 cut(s) 683, 1734
Lsp1109I GCAGC 6 cut(s) 50, 392, 1402, 1420, 1463, 1853
LweI GCATC 4 cut(s) 599, 1498, 1738, 2039
MaeI CTAG 7 cut(s) 99, 810, 1503, 1710, 2004, 2036, 2105
MaeII ACGT 1 cut(s) 342
MaeIII GTNAC 7 cut(s) 257, 480, 521, 553, 1469, 1940, 2127
MalI GATC 8 cut(s) 12, 165, 188, 333, 423, 951, 1140, 1428
MboI GATC 8 cut(s) 10, 163, 186, 331, 421, 949, 1138, 1426
MboII GAAGA 6 cut(s) 397, 672, 697, 852, 1256, 2031
MfeI CAATTG 1 cut(s) 1437
MflI RGATCY 1 cut(s) 163
MhlI GDGCHC 3 cut(s) 434, 908, 1840
MlsI TGGCCA 3 cut(s) 1878, 1922, 2219
MluNI TGGCCA 3 cut(s) 1878, 1922, 2219
MlyI GAGTC 1 cut(s) 2135
Mox20I TGGCCA 3 cut(s) 1878, 1922, 2219
Mph1103I ATGCAT 1 cut(s) 1909
MroI TCCGGA 1 cut(s) 1522
MroXI GAANNNNTTC 4 cut(s) 131, 829, 1104, 1788
MscI TGGCCA 3 cut(s) 1878, 1922, 2219
MseI TTAA 7 cut(s) 246, 252, 272, 534, 996, 1325, 1679
MslI CAYNNNNRTG 1 cut(s) 1993
Msp20I TGGCCA 3 cut(s) 1878, 1922, 2219
MspI CCGG 5 cut(s) 55, 84, 178, 1384, 1523
MspR9I CCNGG 3 cut(s) 18, 1095, 1964
MunI CAATTG 1 cut(s) 1437
MvaI CCWGG 3 cut(s) 18, 1095, 1964
MvnI CGCG 3 cut(s) 324, 948, 2207
MwoI GCNNNNNNNGC 9 cut(s) 60, 587, 1549, 1610, 1619, 1757, 1863, 1875, 2036
NdeI CATATG 2 cut(s) 616, 1405
NdeII GATC 8 cut(s) 10, 163, 186, 331, 421, 949, 1138, 1426
NlaIV GGNNCC 2 cut(s) 1809, 1810
NmuCI GTSAC 5 cut(s) 257, 521, 553, 1469, 2127
NsbI TGCGCA 1 cut(s) 1949
NsiI ATGCAT 1 cut(s) 1909
NspI RCATGY 2 cut(s) 1087, 2142
PaeI GCATGC 1 cut(s) 1087
PceI AGGCCT 1 cut(s) 131
PciI ACATGT 1 cut(s) 2138
PdmI GAANNNNTTC 4 cut(s) 131, 829, 1104, 1788
PflMI CCANNNNNTGG 1 cut(s) 620
PfoI TCCNGGA 1 cut(s) 1962
PinAI ACCGGT 1 cut(s) 1383
PkrI GCNGC 6 cut(s) 65, 382, 1392, 1435, 1453, 1868
PleI GAGTC 1 cut(s) 2134
PpsI GAGTC 1 cut(s) 2134
PpuMI RGGWCCY 1 cut(s) 1808
PscI ACATGT 1 cut(s) 2138
Psp5II RGGWCCY 1 cut(s) 1808
Psp6I CCWGG 3 cut(s) 16, 1093, 1962
PspGI CCWGG 3 cut(s) 16, 1093, 1962
PspN4I GGNNCC 2 cut(s) 1809, 1810
PspPI GGNCC 4 cut(s) 81, 348, 623, 1808
PspPPI RGGWCCY 1 cut(s) 1808
PsuI RGATCY 1 cut(s) 163
RsaI GTAC 4 cut(s) 2122, 2167, 2202, 2231
RsaNI GTAC 4 cut(s) 2121, 2166, 2201, 2230
RseI CAYNNNNRTG 1 cut(s) 1993
SaqAI TTAA 7 cut(s) 246, 252, 272, 534, 996, 1325, 1679
SatI GCNGC 6 cut(s) 64, 381, 1391, 1434, 1452, 1867
Sau3AI GATC 8 cut(s) 10, 163, 186, 331, 421, 949, 1138, 1426
Sau96I GGNCC 4 cut(s) 81, 348, 623, 1808
ScaI AGTACT 2 cut(s) 2202, 2231
SchI GAGTC 1 cut(s) 2135
ScrFI CCNGG 3 cut(s) 18, 1095, 1964
SduI GDGCHC 3 cut(s) 434, 908, 1840
SfaNI GCATC 4 cut(s) 599, 1498, 1738, 2039
SfcI CTRYAG 1 cut(s) 2132
SinI GGWCC 2 cut(s) 81, 1808
SmiMI CAYNNNNRTG 1 cut(s) 1993
SmlI CTYRAG 2 cut(s) 1651, 2080
SmoI CTYRAG 2 cut(s) 1651, 2080
SphI GCATGC 1 cut(s) 1087
SseBI AGGCCT 1 cut(s) 131
SsiI CCGC 1 cut(s) 322
SspMI CTAG 7 cut(s) 99, 810, 1503, 1710, 2004, 2036, 2105
StuI AGGCCT 1 cut(s) 131
StyD4I CCNGG 3 cut(s) 16, 1093, 1962
StyI CCWWGG 1 cut(s) 1455
TaaI ACNGT 6 cut(s) 501, 527, 1250, 1701, 1916, 2234
TaiI ACGT 1 cut(s) 345
TaqI TCGA 3 cut(s) 330, 424, 1489
TatI WGTACW 3 cut(s) 2120, 2200, 2229
Tru1I TTAA 7 cut(s) 246, 252, 272, 534, 996, 1325, 1679
Tru9I TTAA 7 cut(s) 246, 252, 272, 534, 996, 1325, 1679
TscAI CASTG 4 cut(s) 506, 658, 820, 915
TseFI GTSAC 5 cut(s) 257, 521, 553, 1469, 2127
TseI GCWGC 6 cut(s) 63, 380, 1390, 1433, 1451, 1866
Tsp45I GTSAC 5 cut(s) 257, 521, 553, 1469, 2127
TspDTI ATGAA 9 cut(s) 249, 289, 905, 1037, 1170, 1181, 1392, 1689, 2049
TspGWI ACGGA 2 cut(s) 33, 386
TspRI CASTG 4 cut(s) 506, 658, 820, 915
Van91I CCANNNNNTGG 1 cut(s) 620
VpaK11BI GGWCC 2 cut(s) 81, 1808
XapI RAATTY 5 cut(s) 241, 274, 892, 1177, 1518
XbaI TCTAGA 1 cut(s) 2104
XceI RCATGY 2 cut(s) 1087, 2142
XmnI GAANNNNTTC 4 cut(s) 131, 829, 1104, 1788
XspI CTAG 7 cut(s) 99, 810, 1503, 1710, 2004, 2036, 2105
ZrmI AGTACT 2 cut(s) 2202, 2231
Zsp2I ATGCAT 1 cut(s) 1909
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.