MD02G1273700.v1.1

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0000107
Physical Location & Seq
Forward (+)
32825037 .. 32827458
2422 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1273700.v1.1.491

Sequence Viewer

Length: 1815 bp
ATGACAATCTCTTTCTTCATCCTGTTCACGGCAGGTCTCATGATAAACCTTGGAGCATGCCAAAATGAGTGCACAGAATCACGCTGCGGAGATTATGGTCCGCCTATCCGATTCCCATTTAGACTCAGAGAGAAACAGCCAAGCCACTGTGGCTATCCTGGATTTGATTTATCCTGCGATCGAAGCAACAACACGGTGCTTGAGCTGCCAGTTTCCGTTAAGTTCTTCATCACTAGTATCAACTACAAATCTCAGGTGATTCAAGTATTTGATCCAGATAATTGTCTTCCAAGACATCTTCCGAAACTTAATTTATCTTCCTCTGCTTTCATATTCCAAGAGCCGTACCTATATGACTATACCTTATTTAATTGCTCACCAGCAAAAAGAGATATATATTATGATACAATCCCTTGCCTTAGTGGGACTAGCCATCACATATTTTCTATACCTTCAGATAGATTCGTTGACAGTCTTTCCCTCACATCTTGTACCAAGTTGTACAACTTTCCATTCAGTGTTCCATATGATATATTCGAACCATATTATTTTCTTCCTTTGAAATGGTCCAAACCAACATGTAACCGATGTGAAAGGAGAGGTAAAGGATGTAGACTGCAGAACAACAATCGCACCAACTTCGAAACTGAGTGCTTCAATGTAAGCAAGCAAAACGGTACCGCGAAAAAACTAGTTGTTACAGGTGCAGTCCTTGGTTCATTTTTACTTGTGTTGATACTTCTCGGACTCCATCGTGTATATACTTTTGACCGAAAAGAAAAGGAGCGGCGAACCATGATCGAAGAATTTTTGGAAAACTACAGAGCTCTCAGGCCTACAAGGTACTCATATGCAGATATCAAGCGGATTACAAATAAATTTAGAGACAAGTTGGGACAGGGAACATTTGGAACAGTGTTCAAAGGAAAGCTTTCGAGTGAGATCTTTGTTGCTGTAAAGATGCTCAACAATTCCAAAGGAAATGGAGAAGAGTTTATCAATGAAGTGGGAACATTAGGTCGGATCCACCATATTAACGTGGTTCGCTTGGTTGGATATTGCGCTGATGGATTTAGGCGAGCCTTAGTTTATGAATTTGCACCAAACGGTTCACTGCAAAATTTCATTTCGTCAGCAGACAGCAAGAACCATTTCCTTGGTTGGGAGAAGCTGCAACATATTACACTCAGCATAGCCAAAGGAATTGAGTATCTTCACCATGGATGTGACCAACGAATCCTTCATTTCGATATCAAACCTCACAATGTTCTATTAGATGACAACTTCAACCCAAAAATCTCAGATTTCGGTCTTGCCAAGTTGTGCTCCAAGGACCAAAGTGCAGTTTCCATGACAACTGCTAGGGGTACCATGGGATACATTGCGCCGGAAGTGTTCTCAAGGAACTTTGGTACCGTGTCTTACAAGTCAGATGTCTACAGTTTCGGAATGTTGTTACTTGAAATGGTTGCGGGCAGGAAAAATGTTCAAGTCACAGAGGAGAATACAGGGCAAGTTTATTTCCCCGAATGGGTCTATAATCTTCTAGAACAAGGGGATGACATACGCATCCACGTCGAGGGAGAGAATGATGCTAAAATTGCCACGAAACTTGCAATTGTGGGGCTATGGTGCATCCAGTGGTATCCAGTAGACCGTCCTTCAATGAAAGCTGTCGTTCAAATGTTGGAAGGAGAAGACAACGTAAAATTGCCTCCTAATCCTTTCTCCTCTGCCGCTTCAGCAAGAAACGATATCACTATGCTTGCAAAACGCCATCGCCAAGAGTTACCAGTCATCTCCGAATTAGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase Pkinase_Tyr

Protein Analysis

605

Amino Acids

68.83

Weight (kDa)

8.51

Isoelectric Point (pI)

39.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 24 - 91 5.2e-19 Wall-associated receptor kinase galacturonan-binding
PK_Tyr_Ser-Thr PF07714 294 - 563 4.4e-45 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 296 - 561 1.3e-47 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 23
Acc65I GGTACC 3 cut(s) 677, 1367, 1412
AccB1I GGYRCC 3 cut(s) 677, 1367, 1412
AccBSI CCGCTC 1 cut(s) 787
AccI GTMKAC 3 cut(s) 613, 1437, 1653
AccII CGCG 1 cut(s) 683
AciI CCGC 7 cut(s) 87, 101, 681, 787, 865, 1472, 1737
AclWI GGATC 3 cut(s) 266, 1018, 1031
AcsI RAATTY 4 cut(s) 806, 878, 1094, 1120
AcuI CTGAAG 2 cut(s) 438, 1725
AfaI GTAC 7 cut(s) 347, 493, 503, 679, 845, 1369, 1414
AfiI CCNNNNNNNGG 4 cut(s) 28, 1162, 1531, 1579
AflIII ACRYGT 1 cut(s) 578
AgsI TTSAA 9 cut(s) 263, 562, 658, 922, 1288, 1463, 1490, 1665, 1682
AhlI ACTAGT 2 cut(s) 233, 691
AjiI CACGTC 1 cut(s) 1576
AjnI CCWGG 1 cut(s) 157
AjuI GAANNNNNNNTTGG 2 cut(s) 1224, 1256
AluBI AGCT 5 cut(s) 205, 827, 931, 1171, 1673
AluI AGCT 5 cut(s) 205, 827, 931, 1171, 1673
Alw21I GWGCWC 3 cut(s) 74, 829, 1328
Alw26I GTCTC 2 cut(s) 41, 879
Alw44I GTGCAC 1 cut(s) 70
AlwI GGATC 3 cut(s) 266, 1018, 1031
AoxI GGCC 1 cut(s) 833
ApaLI GTGCAC 1 cut(s) 70
ApeKI GCWGC 3 cut(s) 84, 205, 1171
ApoI RAATTY 4 cut(s) 806, 878, 1094, 1120
Asp700I GAANNNNTTC 2 cut(s) 931, 1151
Asp718I GGTACC 3 cut(s) 677, 1367, 1412
AspLEI GCGC 2 cut(s) 1064, 1387
AspS9I GGNCC 3 cut(s) 98, 567, 1333
AsuHPI GGTGA 3 cut(s) 268, 369, 1208
AsuII TTCGAA 2 cut(s) 537, 642
AvaII GGWCC 3 cut(s) 98, 567, 1333
BaeGI GKGCMC 1 cut(s) 74
BaeI ACNNNNGTAYC 2 cut(s) 1396, 1429
BamHI GGATCC 1 cut(s) 1023
BanI GGYRCC 3 cut(s) 677, 1367, 1412
BanII GRGCYC 1 cut(s) 829
BbsI GAAGAC 2 cut(s) 278, 1704
Bbv12I GWGCWC 3 cut(s) 74, 829, 1328
BbvI GCAGC 3 cut(s) 71, 192, 1158
BccI CCATC 4 cut(s) 441, 759, 1061, 1785
BceAI ACGGC 2 cut(s) 45, 328
BcgI CGANNNNNNTGC 4 cut(s) 622, 656, 1558, 1592
BciT130I CCWGG 1 cut(s) 159
BciVI GTATCC 2 cut(s) 1370, 1656
BcoDI GTCTC 2 cut(s) 41, 879
BcuI ACTAGT 2 cut(s) 233, 691
BfaI CTAG 5 cut(s) 234, 429, 692, 1362, 1547
BfmI CTRYAG 3 cut(s) 617, 820, 1438
BfuAI ACCTGC 1 cut(s) 23
BfuI GTATCC 2 cut(s) 1370, 1656
BglI GCCNNNNNGGC 1 cut(s) 150
BglII AGATCT 1 cut(s) 942
BisI GCNGC 5 cut(s) 85, 206, 788, 1172, 1737
BlsI GCNGC 5 cut(s) 86, 207, 789, 1173, 1738
Bme1390I CCNGG 1 cut(s) 159
Bme18I GGWCC 3 cut(s) 98, 567, 1333
BmgBI CACGTC 1 cut(s) 1576
BmgT120I GGNCC 3 cut(s) 98, 567, 1333
BmiI GGNNCC 4 cut(s) 679, 1025, 1369, 1414
BmrFI CCNGG 1 cut(s) 159
BmsI GCATC 4 cut(s) 951, 1578, 1582, 1644
BpiI GAAGAC 2 cut(s) 278, 1704
Bpu14I TTCGAA 2 cut(s) 537, 642
BpuEI CTTGAG 2 cut(s) 221, 1384
BsaI GGTCTC 1 cut(s) 41
BsaJI CCNNGG 6 cut(s) 49, 712, 1156, 1219, 1329, 1371
Bsc4I CCNNNNNNNGG 4 cut(s) 28, 1162, 1531, 1579
Bse1I ACTGG 4 cut(s) 209, 1639, 1649, 1793
Bse3DI GCAATG 1 cut(s) 1380
BseBI CCWGG 1 cut(s) 159
BseDI CCNNGG 6 cut(s) 49, 712, 1156, 1219, 1329, 1371
BseGI GGATG 6 cut(s) 18, 614, 1229, 1564, 1569, 1635
BseLI CCNNNNNNNGG 4 cut(s) 28, 1162, 1531, 1579
BseMI GCAATG 1 cut(s) 1380
BseMII CTCAG 6 cut(s) 139, 266, 639, 844, 1201, 1314
BseNI ACTGG 4 cut(s) 209, 1639, 1649, 1793
BseRI GAGGAG 2 cut(s) 1514, 1720
BseSI GKGCMC 1 cut(s) 74
BseXI GCAGC 3 cut(s) 71, 192, 1158
BsgI GTGCAG 2 cut(s) 726, 1362
Bsh1236I CGCG 1 cut(s) 683
Bsh1285I CGRYCG 1 cut(s) 181
BshFI GGCC 1 cut(s) 835
BshNI GGYRCC 3 cut(s) 677, 1367, 1412
BsiEI CGRYCG 1 cut(s) 181
BsiHKAI GWGCWC 3 cut(s) 74, 829, 1328
BsiSI CCGG 1 cut(s) 1388
BslFI GGGAC 2 cut(s) 439, 909
BslI CCNNNNNNNGG 4 cut(s) 28, 1162, 1531, 1579
BsmAI GTCTC 2 cut(s) 41, 879
BsmFI GGGAC 2 cut(s) 439, 909
BsnI GGCC 1 cut(s) 835
Bso31I GGTCTC 1 cut(s) 41
Bsp119I TTCGAA 2 cut(s) 537, 642
Bsp1286I GDGCHC 3 cut(s) 74, 829, 1328
Bsp1407I TGTACA 1 cut(s) 501
Bsp143I GATC 5 cut(s) 178, 271, 798, 942, 1023
Bsp19I CCATGG 2 cut(s) 1219, 1371
BspACI CCGC 7 cut(s) 87, 101, 681, 787, 865, 1472, 1737
BspANI GGCC 1 cut(s) 835
BspCNI CTCAG 6 cut(s) 138, 265, 640, 843, 1200, 1313
BspFNI CGCG 1 cut(s) 683
BspHI TCATGA 1 cut(s) 39
BspLI GGNNCC 4 cut(s) 679, 1025, 1369, 1414
BspMAI CTGCAG 1 cut(s) 621
BspMI ACCTGC 1 cut(s) 23
BspPI GGATC 3 cut(s) 266, 1018, 1031
BspT104I TTCGAA 2 cut(s) 537, 642
BspT107I GGYRCC 3 cut(s) 677, 1367, 1412
BspTNI GGTCTC 1 cut(s) 41
BsrBI CCGCTC 1 cut(s) 787
BsrDI GCAATG 1 cut(s) 1380
BsrGI TGTACA 1 cut(s) 501
BsrI ACTGG 4 cut(s) 209, 1639, 1649, 1793
BssECI CCNNGG 6 cut(s) 49, 712, 1156, 1219, 1329, 1371
BssMI GATC 5 cut(s) 178, 271, 798, 942, 1023
BssT1I CCWWGG 6 cut(s) 49, 712, 1156, 1219, 1329, 1371
Bst2UI CCWGG 1 cut(s) 159
Bst4CI ACNGT 9 cut(s) 149, 196, 473, 677, 916, 1109, 1417, 1442, 1658
Bst6I CTCTTC 1 cut(s) 984
BstAUI TGTACA 1 cut(s) 501
BstBI TTCGAA 2 cut(s) 537, 642
BstC8I GCNNGC 5 cut(s) 58, 668, 1080, 1474, 1767
BstDEI CTNAG 8 cut(s) 125, 252, 419, 648, 830, 1084, 1187, 1300
BstDSI CCRYGG 2 cut(s) 1219, 1371
BstF5I GGATG 6 cut(s) 18, 614, 1229, 1564, 1569, 1635
BstFNI CGCG 1 cut(s) 683
BstHHI GCGC 2 cut(s) 1064, 1387
BstKTI GATC 5 cut(s) 181, 274, 801, 945, 1026
BstMAI GTCTC 2 cut(s) 41, 879
BstMBI GATC 5 cut(s) 178, 271, 798, 942, 1023
BstMCI CGRYCG 1 cut(s) 181
BstMWI GCNNNNNNNGC 5 cut(s) 150, 183, 205, 1601, 1742
BstNI CCWGG 1 cut(s) 159
BstNSI RCATGY 2 cut(s) 60, 582
BstSCI CCNGG 1 cut(s) 157
BstSFI CTRYAG 3 cut(s) 617, 820, 1438
BstSLI GKGCMC 1 cut(s) 74
BstUI CGCG 1 cut(s) 683
BstV1I GCAGC 3 cut(s) 71, 192, 1158
BstV2I GAAGAC 2 cut(s) 278, 1704
BstX2I RGATCY 2 cut(s) 942, 1023
BstXI CCANNNNNNTGG 1 cut(s) 1157
BstYI RGATCY 2 cut(s) 942, 1023
BsuI GTATCC 2 cut(s) 1370, 1656
BsuRI GGCC 1 cut(s) 835
BtgI CCRYGG 2 cut(s) 1219, 1371
BtgZI GCGATG 1 cut(s) 1763
BtrI CACGTC 1 cut(s) 1576
BtsCI GGATG 6 cut(s) 18, 614, 1229, 1564, 1569, 1635
BtsI GCAGTG 1 cut(s) 1112
BtsIMutI CAGTG 5 cut(s) 145, 523, 921, 1112, 1646
BveI ACCTGC 1 cut(s) 23
Cac8I GCNNGC 5 cut(s) 58, 668, 1080, 1474, 1767
CciI TCATGA 1 cut(s) 39
CfoI GCGC 2 cut(s) 1064, 1387
Cfr13I GGNCC 3 cut(s) 98, 567, 1333
Csp6I GTAC 7 cut(s) 346, 492, 502, 678, 844, 1368, 1413
CspCI CAANNNNNGTGG 2 cut(s) 1594, 1629
CviAII CATG 7 cut(s) 40, 57, 579, 796, 1220, 1351, 1372
CviQI GTAC 7 cut(s) 346, 492, 502, 678, 844, 1368, 1413
DdeI CTNAG 8 cut(s) 125, 252, 419, 648, 830, 1084, 1187, 1300
DpnI GATC 5 cut(s) 180, 273, 800, 944, 1025
DpnII GATC 5 cut(s) 178, 271, 798, 942, 1023
Eam1104I CTCTTC 1 cut(s) 984
EarI CTCTTC 1 cut(s) 984
EciI GGCGGA 1 cut(s) 90
Ecl136II GAGCTC 1 cut(s) 827
Eco130I CCWWGG 6 cut(s) 49, 712, 1156, 1219, 1329, 1371
Eco147I AGGCCT 1 cut(s) 835
Eco24I GRGCYC 1 cut(s) 829
Eco31I GGTCTC 1 cut(s) 41
Eco32I GATATC 3 cut(s) 859, 1252, 1756
Eco47I GGWCC 3 cut(s) 98, 567, 1333
Eco53kI GAGCTC 1 cut(s) 827
Eco57I CTGAAG 2 cut(s) 438, 1725
EcoICRI GAGCTC 1 cut(s) 827
EcoRII CCWGG 1 cut(s) 157
EcoRV GATATC 3 cut(s) 859, 1252, 1756
EcoT14I CCWWGG 6 cut(s) 49, 712, 1156, 1219, 1329, 1371
EcoT38I GRGCYC 1 cut(s) 829
ErhI CCWWGG 6 cut(s) 49, 712, 1156, 1219, 1329, 1371
FaeI CATG 7 cut(s) 43, 60, 582, 799, 1223, 1354, 1375
FalI AAGNNNNNCTT 2 cut(s) 915, 947
FaqI GGGAC 2 cut(s) 439, 909
FatI CATG 7 cut(s) 39, 56, 578, 795, 1219, 1350, 1371
FauI CCCGC 1 cut(s) 1465
FauNDI CATATG 2 cut(s) 526, 850
FblI GTMKAC 3 cut(s) 613, 1437, 1653
Fnu4HI GCNGC 5 cut(s) 85, 206, 788, 1172, 1737
FokI GGATG 6 cut(s) 5, 621, 1236, 1556, 1571, 1622
FriOI GRGCYC 1 cut(s) 829
Fsp4HI GCNGC 5 cut(s) 85, 206, 788, 1172, 1737
FspBI CTAG 5 cut(s) 234, 429, 692, 1362, 1547
GlaI GCGC 2 cut(s) 1063, 1386
GluI GCNGC 5 cut(s) 85, 206, 788, 1172, 1737
HaeIII GGCC 1 cut(s) 835
HapII CCGG 1 cut(s) 1388
HhaI GCGC 2 cut(s) 1064, 1387
Hin1II CATG 7 cut(s) 43, 60, 582, 799, 1223, 1354, 1375
Hin6I GCGC 2 cut(s) 1062, 1385
HinP1I GCGC 2 cut(s) 1062, 1385
HincII GTYRAC 1 cut(s) 469
HindII GTYRAC 1 cut(s) 469
HindIII AAGCTT 1 cut(s) 929
HinfI GANTC 7 cut(s) 77, 111, 123, 259, 462, 747, 1236
HpaII CCGG 1 cut(s) 1388
HphI GGTGA 3 cut(s) 268, 369, 1208
Hpy166II GTNNAC 7 cut(s) 27, 72, 469, 614, 1112, 1438, 1654
Hpy188III TCNNGA 3 cut(s) 40, 275, 1547
Hpy8I GTNNAC 7 cut(s) 27, 72, 469, 614, 1112, 1438, 1654
Hpy99I CGWCG 1 cut(s) 1580
HpyAV CCTTC 4 cut(s) 462, 1250, 1671, 1685
HpyCH4III ACNGT 9 cut(s) 149, 196, 473, 677, 916, 1109, 1417, 1442, 1658
HpyCH4IV ACGT 3 cut(s) 1038, 1575, 1704
HpyF10VI GCNNNNNNNGC 5 cut(s) 150, 183, 205, 1601, 1742
HpyF3I CTNAG 8 cut(s) 125, 252, 419, 648, 830, 1084, 1187, 1300
HpySE526I ACGT 3 cut(s) 1038, 1575, 1704
Hsp92II CATG 7 cut(s) 43, 60, 582, 799, 1223, 1354, 1375
HspAI GCGC 2 cut(s) 1062, 1385
KpnI GGTACC 3 cut(s) 681, 1371, 1416
Kzo9I GATC 5 cut(s) 178, 271, 798, 942, 1023
LmnI GCTCC 3 cut(s) 53, 784, 1331
Lsp1109I GCAGC 3 cut(s) 71, 192, 1158
LweI GCATC 4 cut(s) 951, 1578, 1582, 1644
MaeI CTAG 5 cut(s) 234, 429, 692, 1362, 1547
MaeII ACGT 3 cut(s) 1038, 1575, 1704
MaeIII GTNAC 6 cut(s) 581, 697, 1226, 1455, 1492, 1788
MalI GATC 5 cut(s) 180, 273, 800, 944, 1025
MbiI CCGCTC 1 cut(s) 787
MboI GATC 5 cut(s) 178, 271, 798, 942, 1023
MfeI CAATTG 1 cut(s) 1617
MflI RGATCY 2 cut(s) 942, 1023
MhlI GDGCHC 3 cut(s) 74, 829, 1328
MlyI GAGTC 2 cut(s) 117, 741
MmeI TCCRAC 3 cut(s) 1001, 1033, 1668
MnlI CCTC 8 cut(s) 331, 491, 593, 1269, 1492, 1573, 1725, 1741
MroXI GAANNNNTTC 2 cut(s) 931, 1151
MseI TTAA 4 cut(s) 219, 309, 369, 1035
MslI CAYNNNNRTG 1 cut(s) 1224
MspI CCGG 1 cut(s) 1388
MspR9I CCNGG 1 cut(s) 159
MunI CAATTG 1 cut(s) 1617
MvaI CCWGG 1 cut(s) 159
MvnI CGCG 1 cut(s) 683
MwoI GCNNNNNNNGC 5 cut(s) 150, 183, 205, 1601, 1742
NcoI CCATGG 2 cut(s) 1219, 1371
NdeI CATATG 2 cut(s) 526, 850
NdeII GATC 5 cut(s) 178, 271, 798, 942, 1023
NlaIII CATG 7 cut(s) 43, 60, 582, 799, 1223, 1354, 1375
NlaIV GGNNCC 4 cut(s) 679, 1025, 1369, 1414
NmuCI GTSAC 2 cut(s) 1226, 1492
NspI RCATGY 2 cut(s) 60, 582
NspV TTCGAA 2 cut(s) 537, 642
PaeI GCATGC 1 cut(s) 60
PagI TCATGA 1 cut(s) 39
PceI AGGCCT 1 cut(s) 835
PciI ACATGT 1 cut(s) 578
PdmI GAANNNNTTC 2 cut(s) 931, 1151
PfeI GAWTC 5 cut(s) 77, 111, 259, 462, 1236
PfoI TCCNGGA 1 cut(s) 157
PkrI GCNGC 5 cut(s) 86, 207, 789, 1173, 1738
Ple19I CGATCG 1 cut(s) 181
PleI GAGTC 2 cut(s) 117, 741
PpsI GAGTC 2 cut(s) 117, 741
PscI ACATGT 1 cut(s) 578
Psp124BI GAGCTC 1 cut(s) 829
Psp6I CCWGG 1 cut(s) 157
PspGI CCWGG 1 cut(s) 157
PspN4I GGNNCC 4 cut(s) 679, 1025, 1369, 1414
PspPI GGNCC 3 cut(s) 98, 567, 1333
PstI CTGCAG 1 cut(s) 621
PsuI RGATCY 2 cut(s) 942, 1023
PvuI CGATCG 1 cut(s) 181
RsaI GTAC 7 cut(s) 347, 493, 503, 679, 845, 1369, 1414
RsaNI GTAC 7 cut(s) 346, 492, 502, 678, 844, 1368, 1413
RseI CAYNNNNRTG 1 cut(s) 1224
SacI GAGCTC 1 cut(s) 829
SaqAI TTAA 4 cut(s) 219, 309, 369, 1035
SatI GCNGC 5 cut(s) 85, 206, 788, 1172, 1737
Sau3AI GATC 5 cut(s) 178, 271, 798, 942, 1023
Sau96I GGNCC 3 cut(s) 98, 567, 1333
SchI GAGTC 2 cut(s) 117, 741
ScrFI CCNGG 1 cut(s) 159
SduI GDGCHC 3 cut(s) 74, 829, 1328
SfaNI GCATC 4 cut(s) 951, 1578, 1582, 1644
SfcI CTRYAG 3 cut(s) 617, 820, 1438
SfuI TTCGAA 2 cut(s) 537, 642
SinI GGWCC 3 cut(s) 98, 567, 1333
SmiMI CAYNNNNRTG 1 cut(s) 1224
SmlI CTYRAG 2 cut(s) 200, 1399
SmoI CTYRAG 2 cut(s) 200, 1399
SpeI ACTAGT 2 cut(s) 233, 691
SphI GCATGC 1 cut(s) 60
SseBI AGGCCT 1 cut(s) 835
SsiI CCGC 7 cut(s) 87, 101, 681, 787, 865, 1472, 1737
SspMI CTAG 5 cut(s) 234, 429, 692, 1362, 1547
SstI GAGCTC 1 cut(s) 829
StuI AGGCCT 1 cut(s) 835
StyD4I CCNGG 1 cut(s) 157
StyI CCWWGG 6 cut(s) 49, 712, 1156, 1219, 1329, 1371
TaaI ACNGT 9 cut(s) 149, 196, 473, 677, 916, 1109, 1417, 1442, 1658
TaiI ACGT 3 cut(s) 1041, 1578, 1707
TaqI TCGA 7 cut(s) 181, 537, 642, 801, 935, 1248, 1578
TaqII GACCGA 2 cut(s) 786, 1298
TatI WGTACW 1 cut(s) 501
TauI GCSGC 2 cut(s) 790, 1739
TfiI GAWTC 5 cut(s) 77, 111, 259, 462, 1236
Tru1I TTAA 4 cut(s) 219, 309, 369, 1035
Tru9I TTAA 4 cut(s) 219, 309, 369, 1035
TscAI CASTG 5 cut(s) 152, 523, 921, 1119, 1646
TseFI GTSAC 2 cut(s) 1226, 1492
TseI GCWGC 3 cut(s) 84, 205, 1171
Tsp45I GTSAC 2 cut(s) 1226, 1492
TspDTI ATGAA 9 cut(s) 7, 217, 319, 708, 1017, 1107, 1114, 1232, 1682
TspGWI ACGGA 1 cut(s) 205
TspRI CASTG 5 cut(s) 152, 523, 921, 1119, 1646
VneI GTGCAC 1 cut(s) 70
VpaK11BI GGWCC 3 cut(s) 98, 567, 1333
XapI RAATTY 4 cut(s) 806, 878, 1094, 1120
XbaI TCTAGA 1 cut(s) 1546
XceI RCATGY 2 cut(s) 60, 582
XmiI GTMKAC 3 cut(s) 613, 1437, 1653
XmnI GAANNNNTTC 2 cut(s) 931, 1151
XspI CTAG 5 cut(s) 234, 429, 692, 1362, 1547
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.