RLG00000029611

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0000107
Physical Location & Seq
Reverse (-)
41098708 .. 41100856
2149 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029611

Sequence Viewer

Length: 1851 bp
ATGGCAACTGTTACTTCAGAAATACAGCAGATGCTCGTCTGTTTCTTCTGCTTCTTCTTAATCTTAATAGCTTCCTCCAAATTGCTGGGAGCAGCCGGAAATTCCTGCACAGAATCCAAGTGTGAGGATAATGATGCTCCAGCCATTCACTACCCTTTCCGTCGCGGACAGCATTGTGGCTATGATCCTGTGCTACAATGCACCCAGCCCAATGAAACAGTAGTTGCGGAGAAGTCAGTAGTGCTGGTAAAATTCTTTGTCAAACACATAGATTATAAGCAACAGAAAATCCAGCTCAATCAACCAGATGATTGCCTCCTGCTAACGCCTTTGGGCAGCCCACACAGGCCAACTTCTCCTTTCTATTTCCCAGAGGACAGCATGAATATTACCTTATATCAATGTCCTACCATTCCTTTTGAAAGAGAGTATCTAAAGCAAGTCCCTTGCTTCGGTGGCCCTGCCTCCCAAACATACGCCTTTCCTTCAGACTTGGATTTACTTAGATACATGGTATCAGTAAGGTCTTGTACAAAGATGTATGATGTTTTATCACTTCCATATGGAACTTGGTGGAGAAATGAAGAGGATTTTATACTGAATTGGTCTAAACCAAATTGTACTGAATGTGAGGCAGAGGGTAAGAGCTGTAGATTGCAGATGAACGGCACCAACACTGAAATTGAATGTGTTCACTTGAGGAAACCAAGTGCGACAACCAAATTAGTTGCTACAGGTGCAACTGTAGGTTCATTCCTTCTCTTACTACTGCTCATCCCTGTCTATCGTGCTTATAACTCTGATAGAAAGGAAAAGGAACATCAAAGAAAAATTGAAAGATTTTTGGAAGATTACAAAGCTCTCAAGCCAAGCAGGTACTCATATGCAGATATCAAGCGAATTACAAATCAATTCAAGGACAAGGTAGGAGAAGGGGCCTATGGAACAGTGTTTAAAGGAAATCTTTCTTCTGAACTCTATGTTGCTGTGAAAGTCTTGAAAATTTCAGATGGGAATGGAGAAGATTTCATAAATGAAGTCGGAACTCTAGGTCATATCCACCATGTTAATGTGGTCCGCTTAGTTGGCTTTTGCGCCGATGGATTTGAACGAGCTCTTGTTTATGACTTCTTCCCCAATGGTTCACTGCAAGATTTCATTTCATCAGCAGATAATAAGAATGGTTTCTTGGGTTGGGATAAGTTGCAAGATGTTGCTCTAGGCATAGCCAAAGGAATTGAATATCTACATCAAGGATGCGATCAACAAATCCTTCATTTTGATATCAAACCCCATAATGTTTTGCTAGACCAAAATTTCACTCCAAAAATTTCTGATTTTGGTTTGGCCAAGTTATGTTCAAAGGATCAAAGTATAGTATCAATGACAACAGCAAGGGGCACTATGGGCTACATCGCACCTGAAGTGTTCTCCAGGAACTTTGGGAATGTGTCTCACAAGTCGGATGTCTATAGTTTTGGAATGCTGTTGCTTGAGATGGTAGGAGGGAGGAAGAATATTGGTGCAACCATGGATAACATGCATGCAGTTTACTACCCAAAATGGATCTATAACCTCTTGGAAAAAGGAGAAGACCTCCGAATCCATATTGGGGAAGAAGGGAATTCAAAAATTCCAGAGAAACTTTCAATTATTGGGCTCTCATGCATCCAGTGGTACCCGGTGGCTCGTCCTTCCATGAAAGCAGTGGTTCAGATGCTAGAGGGAAGAGAAAAATTAACAATGCCGCCTAATCCTTTTGCAACAACAGGTCATAGTAGAGCAGATGTTGGAAGTATCCCTAAAATACCCATGTGCCTTGAATTAGAAACAATTACTGAATTAGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase

Protein Analysis

617

Amino Acids

69.33

Weight (kDa)

6.27

Isoelectric Point (pI)

44.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 36 - 100 2e-08 Wall-associated receptor kinase galacturonan-binding
PK_Tyr_Ser-Thr PF07714 304 - 574 2.7e-44 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 305 - 572 2.7e-44 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 276, 795
Acc36I ACCTGC 1 cut(s) 864
Acc65I GGTACC 1 cut(s) 1677
AccB1I GGYRCC 2 cut(s) 668, 1677
AccII CGCG 1 cut(s) 165
AciI CCGC 4 cut(s) 165, 227, 1078, 1748
AclWI GGATC 3 cut(s) 179, 1374, 1574
AcoI YGGCCR 1 cut(s) 1347
AcsI RAATTY 7 cut(s) 100, 251, 1002, 1315, 1329, 1624, 1632
AcuI CTGAAG 2 cut(s) 471, 1443
AfaI GTAC 4 cut(s) 532, 622, 878, 1679
AfiI CCNNNNNNNGG 2 cut(s) 452, 1612
AjnI CCWGG 1 cut(s) 1433
AjuI GAANNNNNNNTTGG 2 cut(s) 1172, 1204
AluBI AGCT 5 cut(s) 71, 295, 648, 860, 1115
AluI AGCT 5 cut(s) 71, 295, 648, 860, 1115
Alw21I GWGCWC 1 cut(s) 1117
Alw26I GTCTC 1 cut(s) 1458
AlwI GGATC 3 cut(s) 179, 1374, 1574
AoxI GGCC 4 cut(s) 347, 457, 936, 1347
ApeKI GCWGC 2 cut(s) 92, 336
ApoI RAATTY 7 cut(s) 100, 251, 1002, 1315, 1329, 1624, 1632
Asp700I GAANNNNTTC 3 cut(s) 690, 964, 1184
Asp718I GGTACC 1 cut(s) 1677
AspLEI GCGC 1 cut(s) 1097
AspS9I GGNCC 3 cut(s) 458, 936, 1075
AsuC2I CCSGG 1 cut(s) 1682
AvaII GGWCC 1 cut(s) 1075
BaeGI GKGCMC 1 cut(s) 1403
BalI TGGCCA 1 cut(s) 1349
BanI GGYRCC 2 cut(s) 668, 1677
BanII GRGCYC 2 cut(s) 1117, 1662
BbsI GAAGAC 1 cut(s) 1599
Bbv12I GWGCWC 1 cut(s) 1117
BbvI GCAGC 2 cut(s) 104, 348
BccI CCATC 3 cut(s) 1004, 1094, 1492
BceAI ACGGC 1 cut(s) 682
BciT130I CCWGG 1 cut(s) 1435
BciVI GTATCC 1 cut(s) 1808
BcnI CCSGG 1 cut(s) 1682
BcoDI GTCTC 1 cut(s) 1458
BfaI CTAG 4 cut(s) 1049, 1220, 1307, 1721
BfmI CTRYAG 4 cut(s) 649, 732, 744, 1471
BfuAI ACCTGC 1 cut(s) 864
BfuI GTATCC 1 cut(s) 1808
BisI GCNGC 3 cut(s) 93, 337, 1748
BlsI GCNGC 3 cut(s) 94, 338, 1749
Bme1390I CCNGG 2 cut(s) 1435, 1682
Bme18I GGWCC 1 cut(s) 1075
BmgT120I GGNCC 3 cut(s) 458, 936, 1075
BmiI GGNNCC 3 cut(s) 670, 937, 1679
BmrFI CCNGG 2 cut(s) 1435, 1682
BmsI GCATC 5 cut(s) 21, 124, 1247, 1677, 1707
BpiI GAAGAC 1 cut(s) 1599
BplI GAGNNNNNCTC 2 cut(s) 1581, 1613
BpmI CTGGAG 2 cut(s) 123, 1417
BpuEI CTTGAG 3 cut(s) 718, 848, 1514
BpuMI CCSGG 1 cut(s) 1682
BsaJI CCNNGG 1 cut(s) 1530
Bsc4I CCNNNNNNNGG 2 cut(s) 452, 1612
Bse1I ACTGG 1 cut(s) 1672
BseBI CCWGG 1 cut(s) 1435
BseDI CCNNGG 1 cut(s) 1530
BseGI GGATG 4 cut(s) 774, 1262, 1471, 1668
BseLI CCNNNNNNNGG 2 cut(s) 452, 1612
BseNI ACTGG 1 cut(s) 1672
BseSI GKGCMC 1 cut(s) 1403
BseXI GCAGC 2 cut(s) 104, 348
BseYI CCCAGC 2 cut(s) 85, 204
BsgI GTGCAG 1 cut(s) 91
Bsh1236I CGCG 1 cut(s) 165
BshFI GGCC 4 cut(s) 349, 459, 938, 1349
BshNI GGYRCC 2 cut(s) 668, 1677
BsiHKAI GWGCWC 1 cut(s) 1117
BsiSI CCGG 2 cut(s) 96, 1682
BslFI GGGAC 1 cut(s) 428
BslI CCNNNNNNNGG 2 cut(s) 452, 1612
BsmAI GTCTC 1 cut(s) 1458
BsmFI GGGAC 1 cut(s) 428
BsmI GAATGC 1 cut(s) 1488
BsnI GGCC 4 cut(s) 349, 459, 938, 1349
Bsp1286I GDGCHC 3 cut(s) 1117, 1403, 1662
Bsp1407I TGTACA 1 cut(s) 530
Bsp143I GATC 4 cut(s) 184, 1261, 1366, 1566
Bsp19I CCATGG 1 cut(s) 1530
BspACI CCGC 4 cut(s) 165, 227, 1078, 1748
BspANI GGCC 4 cut(s) 349, 459, 938, 1349
BspFNI CGCG 1 cut(s) 165
BspLI GGNNCC 3 cut(s) 670, 937, 1679
BspMI ACCTGC 1 cut(s) 864
BspPI GGATC 3 cut(s) 179, 1374, 1574
BspT107I GGYRCC 2 cut(s) 668, 1677
BsrGI TGTACA 1 cut(s) 530
BsrI ACTGG 1 cut(s) 1672
BssECI CCNNGG 1 cut(s) 1530
BssMI GATC 4 cut(s) 184, 1261, 1366, 1566
BssT1I CCWWGG 1 cut(s) 1530
Bst2UI CCWGG 1 cut(s) 1435
Bst4CI ACNGT 4 cut(s) 10, 220, 745, 949
Bst6I CTCTTC 2 cut(s) 579, 1723
BstAUI TGTACA 1 cut(s) 530
BstC8I GCNNGC 1 cut(s) 1545
BstDEI CTNAG 2 cut(s) 503, 1081
BstDSI CCRYGG 1 cut(s) 1530
BstF5I GGATG 4 cut(s) 774, 1262, 1471, 1668
BstFNI CGCG 1 cut(s) 165
BstHHI GCGC 1 cut(s) 1097
BstKTI GATC 4 cut(s) 187, 1264, 1369, 1569
BstMAI GTCTC 1 cut(s) 1458
BstMBI GATC 4 cut(s) 184, 1261, 1366, 1566
BstMWI GCNNNNNNNGC 4 cut(s) 456, 737, 1086, 1407
BstNI CCWGG 1 cut(s) 1435
BstNSI RCATGY 2 cut(s) 1543, 1547
BstSCI CCNGG 2 cut(s) 1433, 1680
BstSFI CTRYAG 4 cut(s) 649, 732, 744, 1471
BstSLI GKGCMC 1 cut(s) 1403
BstUI CGCG 1 cut(s) 165
BstV1I GCAGC 2 cut(s) 104, 348
BstV2I GAAGAC 1 cut(s) 1599
BstX2I RGATCY 1 cut(s) 1566
BstXI CCANNNNNNTGG 1 cut(s) 85
BstYI RGATCY 1 cut(s) 1566
BsuI GTATCC 1 cut(s) 1808
BsuRI GGCC 4 cut(s) 349, 459, 938, 1349
BtgI CCRYGG 1 cut(s) 1530
BtgZI GCGATG 1 cut(s) 1399
BtsCI GGATG 4 cut(s) 774, 1262, 1471, 1668
BtsI GCAGTG 2 cut(s) 1145, 1713
BtsIMutI CAGTG 5 cut(s) 675, 954, 1145, 1679, 1713
BveI ACCTGC 1 cut(s) 864
Cac8I GCNNGC 1 cut(s) 1545
CfoI GCGC 1 cut(s) 1097
Cfr13I GGNCC 3 cut(s) 458, 936, 1075
Csp6I GTAC 4 cut(s) 531, 621, 877, 1678
CviAII CATG 9 cut(s) 382, 511, 1064, 1531, 1540, 1544, 1665, 1699, 1813
CviQI GTAC 4 cut(s) 531, 621, 877, 1678
DdeI CTNAG 2 cut(s) 503, 1081
DpnI GATC 4 cut(s) 186, 1263, 1368, 1568
DpnII GATC 4 cut(s) 184, 1261, 1366, 1566
DraI TTTAAA 1 cut(s) 955
EaeI YGGCCR 1 cut(s) 1347
Eam1104I CTCTTC 2 cut(s) 579, 1723
EarI CTCTTC 2 cut(s) 579, 1723
Ecl136II GAGCTC 1 cut(s) 1115
Eco130I CCWWGG 1 cut(s) 1530
Eco24I GRGCYC 2 cut(s) 1117, 1662
Eco32I GATATC 2 cut(s) 892, 1285
Eco47I GGWCC 1 cut(s) 1075
Eco53kI GAGCTC 1 cut(s) 1115
Eco57I CTGAAG 2 cut(s) 471, 1443
EcoICRI GAGCTC 1 cut(s) 1115
EcoO109I RGGNCCY 1 cut(s) 936
EcoRI GAATTC 1 cut(s) 1624
EcoRII CCWGG 1 cut(s) 1433
EcoRV GATATC 2 cut(s) 892, 1285
EcoT14I CCWWGG 1 cut(s) 1530
EcoT22I ATGCAT 2 cut(s) 1545, 1670
EcoT38I GRGCYC 2 cut(s) 1117, 1662
ErhI CCWWGG 1 cut(s) 1530
FaeI CATG 9 cut(s) 385, 514, 1067, 1534, 1543, 1547, 1668, 1702, 1816
FalI AAGNNNNNCTT 2 cut(s) 948, 980
FaqI GGGAC 1 cut(s) 428
FatI CATG 9 cut(s) 381, 510, 1063, 1530, 1539, 1543, 1664, 1698, 1812
FauNDI CATATG 2 cut(s) 562, 883
Fnu4HI GCNGC 3 cut(s) 93, 337, 1748
FokI GGATG 4 cut(s) 761, 1269, 1478, 1655
FriOI GRGCYC 2 cut(s) 1117, 1662
Fsp4HI GCNGC 3 cut(s) 93, 337, 1748
FspBI CTAG 4 cut(s) 1049, 1220, 1307, 1721
GlaI GCGC 1 cut(s) 1096
GluI GCNGC 3 cut(s) 93, 337, 1748
GsaI CCCAGC 2 cut(s) 89, 208
GsuI CTGGAG 2 cut(s) 123, 1417
HaeIII GGCC 4 cut(s) 349, 459, 938, 1349
HapII CCGG 2 cut(s) 96, 1682
HhaI GCGC 1 cut(s) 1097
Hin1II CATG 9 cut(s) 385, 514, 1067, 1534, 1543, 1547, 1668, 1702, 1816
Hin6I GCGC 1 cut(s) 1095
HinP1I GCGC 1 cut(s) 1095
HinfI GANTC 2 cut(s) 113, 1602
HpaII CCGG 2 cut(s) 96, 1682
Hpy166II GTNNAC 3 cut(s) 694, 1145, 1552
Hpy188III TCNNGA 2 cut(s) 997, 1637
Hpy8I GTNNAC 3 cut(s) 694, 1145, 1552
Hpy99I CGWCG 1 cut(s) 165
HpyAV CCTTC 6 cut(s) 495, 767, 926, 1283, 1613, 1704
HpyCH4III ACNGT 4 cut(s) 10, 220, 745, 949
HpyF10VI GCNNNNNNNGC 4 cut(s) 456, 737, 1086, 1407
HpyF3I CTNAG 2 cut(s) 503, 1081
Hsp92II CATG 9 cut(s) 385, 514, 1067, 1534, 1543, 1547, 1668, 1702, 1816
HspAI GCGC 1 cut(s) 1095
KpnI GGTACC 1 cut(s) 1681
Kzo9I GATC 4 cut(s) 184, 1261, 1366, 1566
LmnI GCTCC 2 cut(s) 89, 142
Lsp1109I GCAGC 2 cut(s) 104, 348
LweI GCATC 5 cut(s) 21, 124, 1247, 1677, 1707
MaeI CTAG 4 cut(s) 1049, 1220, 1307, 1721
MaeIII GTNAC 1 cut(s) 10
MalI GATC 4 cut(s) 186, 1263, 1368, 1568
MboI GATC 4 cut(s) 184, 1261, 1366, 1566
MflI RGATCY 1 cut(s) 1566
MhlI GDGCHC 3 cut(s) 1117, 1403, 1662
MlsI TGGCCA 1 cut(s) 1349
MluNI TGGCCA 1 cut(s) 1349
MmeI TCCRAC 3 cut(s) 1021, 1443, 1771
Mox20I TGGCCA 1 cut(s) 1349
Mph1103I ATGCAT 2 cut(s) 1545, 1670
MroXI GAANNNNTTC 3 cut(s) 690, 964, 1184
MscI TGGCCA 1 cut(s) 1349
MseI TTAA 5 cut(s) 59, 65, 954, 1068, 1739
MslI CAYNNNNRTG 1 cut(s) 1068
Msp20I TGGCCA 1 cut(s) 1349
MspI CCGG 2 cut(s) 96, 1682
MspR9I CCNGG 2 cut(s) 1435, 1682
Mva1269I GAATGC 1 cut(s) 1488
MvaI CCWGG 1 cut(s) 1435
MvnI CGCG 1 cut(s) 165
MwoI GCNNNNNNNGC 4 cut(s) 456, 737, 1086, 1407
NciI CCSGG 1 cut(s) 1682
NcoI CCATGG 1 cut(s) 1530
NdeI CATATG 2 cut(s) 562, 883
NdeII GATC 4 cut(s) 184, 1261, 1366, 1566
NlaIII CATG 9 cut(s) 385, 514, 1067, 1534, 1543, 1547, 1668, 1702, 1816
NlaIV GGNNCC 3 cut(s) 670, 937, 1679
NsiI ATGCAT 2 cut(s) 1545, 1670
NspI RCATGY 2 cut(s) 1543, 1547
PaeI GCATGC 1 cut(s) 1547
PctI GAATGC 1 cut(s) 1488
PdmI GAANNNNTTC 3 cut(s) 690, 964, 1184
PfeI GAWTC 2 cut(s) 113, 1602
PfoI TCCNGGA 1 cut(s) 1433
PkrI GCNGC 3 cut(s) 94, 338, 1749
PsiI TTATAA 2 cut(s) 276, 795
Psp124BI GAGCTC 1 cut(s) 1117
Psp6I CCWGG 1 cut(s) 1433
PspFI CCCAGC 2 cut(s) 85, 204
PspGI CCWGG 1 cut(s) 1433
PspN4I GGNNCC 3 cut(s) 670, 937, 1679
PspPI GGNCC 3 cut(s) 458, 936, 1075
PsuI RGATCY 1 cut(s) 1566
RsaI GTAC 4 cut(s) 532, 622, 878, 1679
RsaNI GTAC 4 cut(s) 531, 621, 877, 1678
RseI CAYNNNNRTG 1 cut(s) 1068
SacI GAGCTC 1 cut(s) 1117
SaqAI TTAA 5 cut(s) 59, 65, 954, 1068, 1739
SatI GCNGC 3 cut(s) 93, 337, 1748
Sau3AI GATC 4 cut(s) 184, 1261, 1366, 1566
Sau96I GGNCC 3 cut(s) 458, 936, 1075
ScrFI CCNGG 2 cut(s) 1435, 1682
SduI GDGCHC 3 cut(s) 1117, 1403, 1662
SfaNI GCATC 5 cut(s) 21, 124, 1247, 1677, 1707
SfcI CTRYAG 4 cut(s) 649, 732, 744, 1471
SinI GGWCC 1 cut(s) 1075
SmiMI CAYNNNNRTG 1 cut(s) 1068
SmlI CTYRAG 3 cut(s) 697, 863, 1493
SmoI CTYRAG 3 cut(s) 697, 863, 1493
SphI GCATGC 1 cut(s) 1547
SsiI CCGC 4 cut(s) 165, 227, 1078, 1748
SspI AATATT 2 cut(s) 388, 1519
SspMI CTAG 4 cut(s) 1049, 1220, 1307, 1721
SstI GAGCTC 1 cut(s) 1117
StyD4I CCNGG 2 cut(s) 1433, 1680
StyI CCWWGG 1 cut(s) 1530
TaaI ACNGT 4 cut(s) 10, 220, 745, 949
TatI WGTACW 2 cut(s) 530, 620
TauI GCSGC 1 cut(s) 1750
TfiI GAWTC 2 cut(s) 113, 1602
Tru1I TTAA 5 cut(s) 59, 65, 954, 1068, 1739
Tru9I TTAA 5 cut(s) 59, 65, 954, 1068, 1739
TscAI CASTG 5 cut(s) 682, 954, 1152, 1679, 1713
TseI GCWGC 2 cut(s) 92, 336
TspGWI ACGGA 1 cut(s) 149
TspRI CASTG 5 cut(s) 682, 954, 1152, 1679, 1713
VpaK11BI GGWCC 1 cut(s) 1075
XapI RAATTY 7 cut(s) 100, 251, 1002, 1315, 1329, 1624, 1632
XceI RCATGY 2 cut(s) 1543, 1547
XcmI CCANNNNNNNNNTGG 2 cut(s) 567, 1705
XmnI GAANNNNTTC 3 cut(s) 690, 964, 1184
XspI CTAG 4 cut(s) 1049, 1220, 1307, 1721
Zsp2I ATGCAT 2 cut(s) 1545, 1670
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.