Rorug01G0108500

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000107
Physical Location & Seq
Forward (+)
19436271 .. 19441000
4730 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0108500.1

Sequence Viewer

Length: 1260 bp
ATGGCCGCCGCCGTCGATGAGTCGCAGAAATGGGTGCTGATGGTGACAGCGCAGACGCCGACCAACATCGCGGTGATCAAGTACTGGGGAAAGAGGGACGAGAAGCTCATCTTGCCGGTCAACGACAGCATCAGCGTCACGCTTGATCCCGGCCACCTCTGCACCACCACCACCGTCTCCGTCAGCCCCGCCTTCACCCAAGATCGCATGTGGCTCAACGGCCAGGAGATTTCGCTCTCCGGAGGCAGATTCCAGAGCTGTTTGAGGGAAATTCGGAGTCGAGCTTGCGACGTTCATGATAAGGAAAAGGGAATCAAGATCAATAAGAAGGATTGGGACGGCTTGCACGTGCACATCGCTTCCTTTAACAATTTTCCTACTGCTGCTGGATTGGCTTCCTCCGCAGCTGGTTTTGCTTGTCTTGTTTTTGCGCTTGGAAAGTTGATGAATGTAAAGGAAGATCAGAGCCAGCTTTCTGCTATTGCAAGGCAAGGTTCAGGCAGTGCTTGTCGCAGCTTATATGGGGGATTTGTCAAGTGGATCATGGGAAAAGACGACAAGGGAACCGACAGTCTTGCAGTTCAACTTGCAGACGAGAAGCACTGGGATGAGCTTGTCATTATTATTGCTGTGGTAAGTTCAAGGCAGAAGGAAACAAGTAGTACTACAGGAATGCGTGATACCGTTGAAACAAGTTTACTATTACAACATAGAGCGAAGGAAGTAGTGCCCAAACGCATATTAAAAATGGAAGAAGCCATTAGGAATCGGGATTTTGCTTCTTTTGCACAGTTGACCTGTACTGACAGTAACCAGTTTCATGCTGTCTGCCTGGACACATGTCCTCCCATATTCTACATGAATGATACATCCCACAGGATAATCAGCCTTGTTGAGAAGTGGAACTGCTCAGAAGGAACACCTCAGGTGGCTTATACATTTGATGCGGGCCCGAATGCGGTTATGATTGCACGTGACAGAAAAACTGCTACCCTTTTGCTTCAGAAGCTTCTTTACACTTTCCCTCCAAATTCTGATGCGGATTTGAACAGTTTTGTTCTTGGTGATAAGTCAATTTTAAAAGATGCTGGTATTAATGCCCCGGAGGATATCGCGACTTTGCCTCCACCTCCAGAAATCAAGGGCCAGCAGTTCAAAGGAGATGTTAGTTACTTTATTTGCACAAGACCTGGGAGAGGTCCAGTGGTGTTGTCAGATGAAACTCATCTTCTCAACCCTGAAACTGGGCTGCCAAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase

Protein Analysis

419

Amino Acids

46.05

Weight (kDa)

6.52

Isoelectric Point (pI)

44.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MVD-like_N PF22700 20 - 193 1.7e-64 Diphosphomevalonate decarboxylase-like N-terminal domain
GHMP_kinases_N PF00288 113 - 169 7.6e-06 GHMP kinases N terminal domain
MDD_C PF18376 207 - 403 4.7e-65 Mevalonate 5-diphosphate decarboxylase C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 71, 1115
AccIII TCCGGA 1 cut(s) 239
AciI CCGC 8 cut(s) 6, 9, 71, 189, 402, 947, 959, 1040
AclWI GGATC 2 cut(s) 140, 548
AcoI YGGCCR 3 cut(s) 3, 151, 220
AcsI RAATTY 2 cut(s) 270, 1030
AcuI CTGAAG 1 cut(s) 986
AcvI CACGTG 2 cut(s) 349, 974
AcyI GRCGYC 1 cut(s) 56
AfaI GTAC 3 cut(s) 83, 664, 802
AfiI CCNNNNNNNGG 3 cut(s) 958, 1196, 1244
AflIII ACRYGT 1 cut(s) 839
AgsI TTSAA 5 cut(s) 584, 642, 689, 1048, 1156
AjnI CCWGG 3 cut(s) 222, 831, 1189
AluBI AGCT 8 cut(s) 106, 258, 284, 407, 472, 516, 613, 1009
AluI AGCT 8 cut(s) 106, 258, 284, 407, 472, 516, 613, 1009
Alw21I GWGCWC 1 cut(s) 354
Alw26I GTCTC 1 cut(s) 181
Alw44I GTGCAC 1 cut(s) 350
AlwI GGATC 2 cut(s) 140, 548
Aor13HI TCCGGA 1 cut(s) 239
AoxI GGCC 5 cut(s) 3, 151, 220, 949, 1144
ApaI GGGCCC 1 cut(s) 953
ApaLI GTGCAC 1 cut(s) 350
ApeKI GCWGC 4 cut(s) 383, 404, 513, 1249
ApoI RAATTY 2 cut(s) 270, 1030
AseI ATTAAT 1 cut(s) 1095
AspLEI GCGC 2 cut(s) 52, 433
AspS9I GGNCC 4 cut(s) 949, 950, 1144, 1199
AsuC2I CCSGG 2 cut(s) 150, 1103
AsuHPI GGTGA 4 cut(s) 55, 85, 187, 1076
AvaII GGWCC 1 cut(s) 1199
AxyI CCTNAGG 1 cut(s) 924
BaeGI GKGCMC 3 cut(s) 354, 732, 953
BanII GRGCYC 1 cut(s) 953
BarI GAAGNNNNNNTAC 2 cut(s) 998, 1030
BbrPI CACGTG 2 cut(s) 349, 974
Bbv12I GWGCWC 1 cut(s) 354
BbvI GCAGC 4 cut(s) 370, 416, 525, 1236
BccI CCATC 1 cut(s) 34
BceAI ACGGC 2 cut(s) 235, 355
BcgI CGANNNNNNTGC 2 cut(s) 557, 591
BciT130I CCWGG 3 cut(s) 224, 833, 1191
BclI TGATCA 1 cut(s) 75
BcnI CCSGG 2 cut(s) 150, 1103
BcoDI GTCTC 1 cut(s) 181
BfmI CTRYAG 1 cut(s) 666
BisI GCNGC 6 cut(s) 6, 9, 384, 405, 514, 1250
BlsI GCNGC 6 cut(s) 7, 10, 385, 406, 515, 1251
BmcAI AGTACT 2 cut(s) 83, 664
Bme1390I CCNGG 5 cut(s) 150, 224, 833, 1103, 1191
Bme18I GGWCC 1 cut(s) 1199
BmgT120I GGNCC 4 cut(s) 949, 950, 1144, 1199
BmiI GGNNCC 2 cut(s) 565, 951
BmrFI CCNGG 5 cut(s) 150, 224, 833, 1103, 1191
BmrI ACTGGG 3 cut(s) 94, 613, 1254
BmsI GCATC 4 cut(s) 138, 934, 1027, 1075
BmuI ACTGGG 3 cut(s) 94, 613, 1254
BoxI GACNNNNGTC 1 cut(s) 840
BpmI CTGGAG 1 cut(s) 1116
BpuMI CCSGG 2 cut(s) 150, 1103
BsaAI YACGTR 2 cut(s) 349, 974
BsaHI GRCGYC 1 cut(s) 56
BsaJI CCNNGG 2 cut(s) 1101, 1190
BsaWI WCCGGW 1 cut(s) 239
BsaXI ACNNNNNCTCC 6 cut(s) 829, 859, 1009, 1039, 1108, 1138
Bsc4I CCNNNNNNNGG 3 cut(s) 958, 1196, 1244
Bse118I RCCGGY 1 cut(s) 115
Bse1I ACTGG 5 cut(s) 89, 608, 814, 1202, 1249
Bse21I CCTNAGG 1 cut(s) 924
BseAI TCCGGA 1 cut(s) 239
BseBI CCWGG 3 cut(s) 224, 833, 1191
BseDI CCNNGG 2 cut(s) 1101, 1190
BseGI GGATG 2 cut(s) 613, 869
BseLI CCNNNNNNNGG 3 cut(s) 958, 1196, 1244
BseMII CTCAG 2 cut(s) 924, 938
BseNI ACTGG 5 cut(s) 89, 608, 814, 1202, 1249
BseSI GKGCMC 3 cut(s) 354, 732, 953
BseXI GCAGC 4 cut(s) 370, 416, 525, 1236
BsgI GTGCAG 1 cut(s) 145
Bsh1236I CGCG 2 cut(s) 71, 1115
BshFI GGCC 5 cut(s) 5, 153, 222, 951, 1146
BsiHKAI GWGCWC 1 cut(s) 354
BsiSI CCGG 4 cut(s) 116, 150, 240, 1103
BslFI GGGAC 2 cut(s) 110, 350
BslI CCNNNNNNNGG 3 cut(s) 958, 1196, 1244
BsmAI GTCTC 1 cut(s) 181
BsmBI CGTCTC 1 cut(s) 181
BsmFI GGGAC 2 cut(s) 110, 350
BsmI GAATGC 2 cut(s) 678, 961
BsnI GGCC 5 cut(s) 5, 153, 222, 951, 1146
Bsp120I GGGCCC 1 cut(s) 949
Bsp1286I GDGCHC 3 cut(s) 354, 732, 953
Bsp13I TCCGGA 1 cut(s) 239
Bsp143I GATC 6 cut(s) 75, 145, 202, 318, 460, 540
Bsp68I TCGCGA 1 cut(s) 1115
BspACI CCGC 8 cut(s) 6, 9, 71, 189, 402, 947, 959, 1040
BspANI GGCC 5 cut(s) 5, 153, 222, 951, 1146
BspCNI CTCAG 2 cut(s) 923, 937
BspEI TCCGGA 1 cut(s) 239
BspFNI CGCG 2 cut(s) 71, 1115
BspHI TCATGA 1 cut(s) 295
BspLI GGNNCC 2 cut(s) 565, 951
BspPI GGATC 2 cut(s) 140, 548
BsrFI RCCGGY 1 cut(s) 115
BsrI ACTGG 5 cut(s) 89, 608, 814, 1202, 1249
BssAI RCCGGY 1 cut(s) 115
BssECI CCNNGG 2 cut(s) 1101, 1190
BssMI GATC 6 cut(s) 75, 145, 202, 318, 460, 540
BssNI GRCGYC 1 cut(s) 56
Bst2UI CCWGG 3 cut(s) 224, 833, 1191
Bst4CI ACNGT 6 cut(s) 175, 572, 685, 792, 809, 1052
BstACI GRCGYC 1 cut(s) 56
BstBAI YACGTR 2 cut(s) 349, 974
BstC8I GCNNGC 5 cut(s) 286, 344, 470, 949, 1148
BstDEI CTNAG 2 cut(s) 910, 924
BstENI CCTNNNNNAGG 1 cut(s) 1194
BstF5I GGATG 2 cut(s) 613, 869
BstFNI CGCG 2 cut(s) 71, 1115
BstHHI GCGC 2 cut(s) 52, 433
BstKTI GATC 6 cut(s) 78, 148, 205, 321, 463, 543
BstMAI GTCTC 1 cut(s) 181
BstMBI GATC 6 cut(s) 75, 145, 202, 318, 460, 540
BstMWI GCNNNNNNNGC 7 cut(s) 112, 159, 392, 401, 413, 785, 1006
BstNI CCWGG 3 cut(s) 224, 833, 1191
BstNSI RCATGY 2 cut(s) 211, 843
BstPAI GACNNNNGTC 1 cut(s) 840
BstSCI CCNGG 5 cut(s) 148, 222, 831, 1101, 1189
BstSFI CTRYAG 1 cut(s) 666
BstSLI GKGCMC 3 cut(s) 354, 732, 953
BstUI CGCG 2 cut(s) 71, 1115
BstV1I GCAGC 4 cut(s) 370, 416, 525, 1236
Bsu36I CCTNAGG 1 cut(s) 924
BsuRI GGCC 5 cut(s) 5, 153, 222, 951, 1146
BtgZI GCGATG 2 cut(s) 52, 340
BtsCI GGATG 2 cut(s) 613, 869
BtsI GCAGTG 1 cut(s) 508
BtsIMutI CAGTG 3 cut(s) 508, 601, 1209
BtuMI TCGCGA 1 cut(s) 1115
Cac8I GCNNGC 5 cut(s) 286, 344, 470, 949, 1148
CciI TCATGA 1 cut(s) 295
CfoI GCGC 2 cut(s) 52, 433
Cfr10I RCCGGY 1 cut(s) 115
Cfr13I GGNCC 4 cut(s) 949, 950, 1144, 1199
CseI GACGC 2 cut(s) 64, 124
Csp6I GTAC 3 cut(s) 82, 663, 801
CviAII CATG 6 cut(s) 208, 296, 544, 821, 840, 859
CviQI GTAC 3 cut(s) 82, 663, 801
DdeI CTNAG 2 cut(s) 910, 924
DpnI GATC 6 cut(s) 77, 147, 204, 320, 462, 542
DpnII GATC 6 cut(s) 75, 145, 202, 318, 460, 540
DraI TTTAAA 1 cut(s) 1080
EaeI YGGCCR 3 cut(s) 3, 151, 220
Eco24I GRGCYC 1 cut(s) 953
Eco32I GATATC 1 cut(s) 1111
Eco47I GGWCC 1 cut(s) 1199
Eco57I CTGAAG 1 cut(s) 986
Eco72I CACGTG 2 cut(s) 349, 974
Eco81I CCTNAGG 1 cut(s) 924
EcoNI CCTNNNNNAGG 1 cut(s) 1194
EcoRII CCWGG 3 cut(s) 222, 831, 1189
EcoRV GATATC 1 cut(s) 1111
EcoT38I GRGCYC 1 cut(s) 953
Esp3I CGTCTC 1 cut(s) 181
FaeI CATG 6 cut(s) 211, 299, 547, 824, 843, 862
FalI AAGNNNNNCTT 2 cut(s) 95, 127
FaqI GGGAC 2 cut(s) 110, 350
FatI CATG 6 cut(s) 207, 295, 543, 820, 839, 858
FauI CCCGC 2 cut(s) 196, 940
FbaI TGATCA 1 cut(s) 75
Fnu4HI GCNGC 6 cut(s) 6, 9, 384, 405, 514, 1250
FokI GGATG 2 cut(s) 620, 856
FriOI GRGCYC 1 cut(s) 953
Fsp4HI GCNGC 6 cut(s) 6, 9, 384, 405, 514, 1250
GlaI GCGC 2 cut(s) 51, 432
GluI GCNGC 6 cut(s) 6, 9, 384, 405, 514, 1250
GsuI CTGGAG 1 cut(s) 1116
HaeIII GGCC 5 cut(s) 5, 153, 222, 951, 1146
HapII CCGG 4 cut(s) 116, 150, 240, 1103
HgaI GACGC 2 cut(s) 64, 124
HhaI GCGC 2 cut(s) 52, 433
Hin1I GRCGYC 1 cut(s) 56
Hin1II CATG 6 cut(s) 211, 299, 547, 824, 843, 862
Hin6I GCGC 2 cut(s) 50, 431
HinP1I GCGC 2 cut(s) 50, 431
HincII GTYRAC 2 cut(s) 121, 795
HindII GTYRAC 2 cut(s) 121, 795
HindIII AAGCTT 1 cut(s) 1007
HinfI GANTC 5 cut(s) 20, 249, 277, 312, 766
HpaII CCGG 4 cut(s) 116, 150, 240, 1103
HphI GGTGA 4 cut(s) 55, 85, 187, 1076
Hpy166II GTNNAC 4 cut(s) 121, 352, 698, 795
Hpy188I TCNGA 6 cut(s) 276, 465, 913, 1005, 1036, 1216
Hpy188III TCNNGA 7 cut(s) 240, 253, 296, 316, 770, 1114, 1133
Hpy8I GTNNAC 4 cut(s) 121, 352, 698, 795
Hpy99I CGWCG 2 cut(s) 17, 293
HpyAV CCTTC 5 cut(s) 202, 322, 643, 712, 908
HpyCH4III ACNGT 6 cut(s) 175, 572, 685, 792, 809, 1052
HpyCH4IV ACGT 3 cut(s) 291, 348, 973
HpyCH4V TGCA 9 cut(s) 162, 346, 352, 485, 578, 590, 788, 971, 1182
HpyF10VI GCNNNNNNNGC 7 cut(s) 112, 159, 392, 401, 413, 785, 1006
HpyF3I CTNAG 2 cut(s) 910, 924
HpySE526I ACGT 3 cut(s) 291, 348, 973
Hsp92I GRCGYC 1 cut(s) 56
Hsp92II CATG 6 cut(s) 211, 299, 547, 824, 843, 862
HspAI GCGC 2 cut(s) 50, 431
Kpn2I TCCGGA 1 cut(s) 239
Ksp22I TGATCA 1 cut(s) 75
Kzo9I GATC 6 cut(s) 75, 145, 202, 318, 460, 540
Lsp1109I GCAGC 4 cut(s) 370, 416, 525, 1236
LweI GCATC 4 cut(s) 138, 934, 1027, 1075
MaeII ACGT 3 cut(s) 291, 348, 973
MaeIII GTNAC 5 cut(s) 43, 136, 809, 974, 1169
MalI GATC 6 cut(s) 77, 147, 204, 320, 462, 542
MboI GATC 6 cut(s) 75, 145, 202, 318, 460, 540
MboII GAAGA 3 cut(s) 470, 764, 1220
MhlI GDGCHC 3 cut(s) 354, 732, 953
MluCI AATT 4 cut(s) 270, 370, 1030, 1074
MlyI GAGTC 2 cut(s) 29, 286
MroI TCCGGA 1 cut(s) 239
MseI TTAA 4 cut(s) 366, 743, 1079, 1095
MslI CAYNNNNRTG 2 cut(s) 71, 606
MspA1I CMGCKG 1 cut(s) 407
MspI CCGG 4 cut(s) 116, 150, 240, 1103
MspR9I CCNGG 5 cut(s) 150, 224, 833, 1103, 1191
Mva1269I GAATGC 2 cut(s) 678, 961
MvaI CCWGG 3 cut(s) 224, 833, 1191
MvnI CGCG 2 cut(s) 71, 1115
MwoI GCNNNNNNNGC 7 cut(s) 112, 159, 392, 401, 413, 785, 1006
NciI CCSGG 2 cut(s) 150, 1103
NdeII GATC 6 cut(s) 75, 145, 202, 318, 460, 540
NlaIII CATG 6 cut(s) 211, 299, 547, 824, 843, 862
NlaIV GGNNCC 2 cut(s) 565, 951
NmuCI GTSAC 3 cut(s) 43, 136, 974
NruI TCGCGA 1 cut(s) 1115
NspI RCATGY 2 cut(s) 211, 843
PagI TCATGA 1 cut(s) 295
PciI ACATGT 1 cut(s) 839
PcsI WCGNNNNNNNCGW 1 cut(s) 345
PctI GAATGC 2 cut(s) 678, 961
PfeI GAWTC 3 cut(s) 249, 312, 766
PkrI GCNGC 6 cut(s) 7, 10, 385, 406, 515, 1251
PleI GAGTC 2 cut(s) 28, 285
PmaCI CACGTG 2 cut(s) 349, 974
PmlI CACGTG 2 cut(s) 349, 974
PpsI GAGTC 2 cut(s) 28, 285
Ppu21I YACGTR 2 cut(s) 349, 974
PscI ACATGT 1 cut(s) 839
PshAI GACNNNNGTC 1 cut(s) 840
PshBI ATTAAT 1 cut(s) 1095
Psp6I CCWGG 3 cut(s) 222, 831, 1189
PspCI CACGTG 2 cut(s) 349, 974
PspGI CCWGG 3 cut(s) 222, 831, 1189
PspN4I GGNNCC 2 cut(s) 565, 951
PspOMI GGGCCC 1 cut(s) 949
PspPI GGNCC 4 cut(s) 949, 950, 1144, 1199
PvuII CAGCTG 1 cut(s) 407
RruI TCGCGA 1 cut(s) 1115
RsaI GTAC 3 cut(s) 83, 664, 802
RsaNI GTAC 3 cut(s) 82, 663, 801
RseI CAYNNNNRTG 2 cut(s) 71, 606
SaqAI TTAA 4 cut(s) 366, 743, 1079, 1095
SatI GCNGC 6 cut(s) 6, 9, 384, 405, 514, 1250
Sau3AI GATC 6 cut(s) 75, 145, 202, 318, 460, 540
Sau96I GGNCC 4 cut(s) 949, 950, 1144, 1199
ScaI AGTACT 2 cut(s) 83, 664
SchI GAGTC 2 cut(s) 29, 286
ScrFI CCNGG 5 cut(s) 150, 224, 833, 1103, 1191
SduI GDGCHC 3 cut(s) 354, 732, 953
SfaNI GCATC 4 cut(s) 138, 934, 1027, 1075
SfcI CTRYAG 1 cut(s) 666
SinI GGWCC 1 cut(s) 1199
SmiMI CAYNNNNRTG 2 cut(s) 71, 606
Sse9I AATT 4 cut(s) 270, 370, 1030, 1074
SsiI CCGC 8 cut(s) 6, 9, 71, 189, 402, 947, 959, 1040
StyD4I CCNGG 5 cut(s) 148, 222, 831, 1101, 1189
TaaI ACNGT 6 cut(s) 175, 572, 685, 792, 809, 1052
TaiI ACGT 3 cut(s) 294, 351, 976
TaqI TCGA 2 cut(s) 15, 280
TasI AATT 4 cut(s) 270, 370, 1030, 1074
TatI WGTACW 3 cut(s) 81, 662, 800
TauI GCSGC 2 cut(s) 8, 11
TfiI GAWTC 3 cut(s) 249, 312, 766
Tru1I TTAA 4 cut(s) 366, 743, 1079, 1095
Tru9I TTAA 4 cut(s) 366, 743, 1079, 1095
TscAI CASTG 3 cut(s) 508, 608, 1209
TseFI GTSAC 3 cut(s) 43, 136, 974
TseI GCWGC 4 cut(s) 383, 404, 513, 1249
Tsp45I GTSAC 3 cut(s) 43, 136, 974
TspDTI ATGAA 5 cut(s) 284, 461, 809, 875, 1233
TspGWI ACGGA 1 cut(s) 169
TspRI CASTG 3 cut(s) 508, 608, 1209
VneI GTGCAC 1 cut(s) 350
VpaK11BI GGWCC 1 cut(s) 1199
VspI ATTAAT 1 cut(s) 1095
XagI CCTNNNNNAGG 1 cut(s) 1194
XapI RAATTY 2 cut(s) 270, 1030
XceI RCATGY 2 cut(s) 211, 843
ZrmI AGTACT 2 cut(s) 83, 664
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.