Rw5G029470

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000107
Physical Location & Seq
Reverse (-)
45298692 .. 45300688
1997 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G029470.1

Sequence Viewer

Length: 1794 bp
ATGCTTCCGACTATGAGTTTGTTGTTCTGGTTGCTCCTGACATTTGTAGAAGTAGATGTTGTGCATGGTGGAGGAGTAGGTCTTGAAAATTGCACAGAAACAAGATGTGGCAGCTATGGCCCAGCTATCCGGTTCCCATTTCGACTTAAAGGTAGGCAACCGGTCCATTGTGGTTACCAGGGCTTTGATCTTTCATGCACTAACGACAATCGGACACTGCTTGAGATGCCATCATCATCTAAGCTCTTTGTTATAGAGATTGATTACACATCACAGACAATTGAAGCAGAACCTCATGCACTTGATTGCTTGGACAGAGACATTTTCTACCACGGTTCTTCTACCTTCAAATATGTCGGCAACACAAGCTTGTTCAGTTGCCCACCATCAACTGAGAGAGATCAATATATTACAGATTCCTACAATGATTGTCTGGCAAGATTGAGCCCTTGCCATGGTAATCCAGGCAACCATATTTATGCTTTTGGGCCAGGTTGTTCTATTGATAAAATACCCCTAGTGTCTTGTACCAAGGTGTATGACTGCAAAGATGCTCTTGGATACCGATATGGTTTCTCAAGCATATATCTCCACTGGTCCATACCATCTTGTCAACATTGTGAAGAGAAGGGCTGTCGGCTGAAGAATGAATTCACAAATCAGACAGATCCTCAAACTCAGTGCTTGGATGTACCCAAAGCCAAAGGTCACAAACTTGGAGCTCCAACTAAAAAGATATTAGGTTATTGCACAGTTTCTATTATTCTTATAGCGACAGGAACAATAATCTACTATGTCTATAGCTCTGTCAAAAGAGAAGAAGAAAATCAGCTGAGAATTAAAAGATTTTTGGATGACTACAGAGCTCTTAAGCCAAGCAGATATTCTTATGTAGATATTAAGAGGATAACAGAGCAGTTCAAGGAGAAGCTGGGTCAAGGGGCCTATGGAACTGTGTTTAAAGGTAAACTTTCTTCTGAATTTCTTGTTGCTGTGAAAATCCTCAACAATTCAAATGAGAAAGGGGAAGATTTTATTAATGAAGTGGGCACAATGGGTCAAATCCACCATGTCAATGTGGTACGCTTGGTTGGTTACTGTGCTGATGGATTTATACGAGCTCTTGTTTATGAATTCTTACCAAACGGTCCACTCCAGAATTTCTTATCATCAGCAGATAATGAGAGTTTGTTCCTTGGTTGGGGTAAGTTGCAAGATATTGCTTTAGGTATAGCGAAAGGAATTGAATATCTTCACCAAGGTTGTGAACAACAAATCCTCCACTTTGACATCAAACCCCATAATGTGTTGCTAGACCATGATTTCACTCCAAAAGTTTCCGATTTTGGTTTAGCCAAGTTGTGCTCTAGGGATCAAAGCGCCGTATCCATGACTGCAGCGAGGGGAACCATGGGCTATATTGCACCAGAAGTCTTCTCAAGGAACTTTGGTAACGTGTCATATAAGGCAGATGTCTATAGTTTTGGAACATTGCTTCTTGAAATGGTTGGGGGCAGAAAGAATTTTAAAGTCATGGAAGACTCCACCAGCCAAGTCTACTTCCCAGAATGGATCTATAACCTCTTAGAACAAGGGAACGACCTTCGCATCCATATTGGGGACGAAGGAAATGTTGAAATTGCTAAGAAACTTGCAGTTGTGGGTCTATGGTGCATCCAATGGTATCCAATAGACCGTCCTTCCATGAAAACAGTAGTTCAAATGTTGGAAAGGGAAGGTGACAATCTGACCATGCCTCCTAATCCTTTTGCCTCTACTTCATCTTCGAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase Pkinase_Tyr

Protein Analysis

597

Amino Acids

67.0

Weight (kDa)

6.17

Isoelectric Point (pI)

36.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 31 - 95 2e-18 Wall-associated receptor kinase galacturonan-binding
PK_Tyr_Ser-Thr PF07714 306 - 576 2.9e-44 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 307 - 574 1.6e-44 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 1557
AclWI GGATC 3 cut(s) 662, 1380, 1580
AcsI RAATTY 5 cut(s) 650, 980, 1133, 1159, 1522
AcuI CTGAAG 1 cut(s) 662
AfaI GTAC 3 cut(s) 529, 693, 1083
AfiI CCNNNNNNNGG 3 cut(s) 455, 1201, 1618
AflII CTTAAG 1 cut(s) 869
AflIII ACRYGT 1 cut(s) 1455
AgeI ACCGGT 1 cut(s) 160
AgsI TTSAA 9 cut(s) 86, 284, 349, 922, 1014, 1247, 1502, 1637, 1721
AjnI CCWGG 3 cut(s) 177, 463, 490
AjuI GAANNNNNNNTTGG 2 cut(s) 868, 900
AloI GAACNNNNNNTCC 2 cut(s) 1260, 1292
Alw21I GWGCWC 4 cut(s) 724, 868, 1123, 1367
Alw26I GTCTC 1 cut(s) 312
AlwI GGATC 3 cut(s) 662, 1380, 1580
AoxI GGCC 3 cut(s) 118, 488, 942
ApeKI GCWGC 2 cut(s) 111, 1397
ApoI RAATTY 5 cut(s) 650, 980, 1133, 1159, 1522
ArsI GACNNNNNNTTYG 1 cut(s) 33
AseI ATTAAT 1 cut(s) 1038
AsiGI ACCGGT 1 cut(s) 160
Asp700I GAANNNNTTC 2 cut(s) 650, 1251
AspLEI GCGC 1 cut(s) 1382
AspS9I GGNCC 6 cut(s) 119, 163, 488, 597, 942, 1148
AsuHPI GGTGA 2 cut(s) 1247, 1751
AvaII GGWCC 3 cut(s) 163, 597, 1148
BaeGI GKGCMC 1 cut(s) 1052
BanII GRGCYC 4 cut(s) 449, 724, 868, 1123
BarI GAAGNNNNNNTAC 2 cut(s) 958, 990
BbsI GAAGAC 2 cut(s) 1426, 1545
Bbv12I GWGCWC 4 cut(s) 724, 868, 1123, 1367
BbvI GCAGC 2 cut(s) 123, 1409
BccI CCATC 4 cut(s) 238, 394, 613, 1100
BceAI ACGGC 1 cut(s) 1367
BciT130I CCWGG 3 cut(s) 179, 465, 492
BciVI GTATCC 3 cut(s) 554, 1396, 1695
BcoDI GTCTC 1 cut(s) 312
BfaI CTAG 3 cut(s) 518, 1313, 1368
BfmI CTRYAG 4 cut(s) 799, 859, 1395, 1477
BfoI RGCGCY 1 cut(s) 1383
BfrI CTTAAG 1 cut(s) 869
BfuI GTATCC 3 cut(s) 554, 1396, 1695
BisI GCNGC 2 cut(s) 112, 1398
BlsI GCNGC 2 cut(s) 113, 1399
Bme1390I CCNGG 3 cut(s) 179, 465, 492
Bme18I GGWCC 3 cut(s) 163, 597, 1148
BmgT120I GGNCC 6 cut(s) 119, 163, 488, 597, 942, 1148
BmiI GGNNCC 3 cut(s) 134, 943, 1408
BmrFI CCNGG 3 cut(s) 179, 465, 492
BmsI GCATC 4 cut(s) 216, 541, 1617, 1683
BpiI GAAGAC 2 cut(s) 1426, 1545
BpmI CTGGAG 1 cut(s) 1139
BpuEI CTTGAG 3 cut(s) 242, 562, 1423
BsaJI CCNNGG 7 cut(s) 178, 331, 454, 531, 1195, 1258, 1410
BsaWI WCCGGW 2 cut(s) 129, 160
BsaXI ACNNNNNCTCC 4 cut(s) 1263, 1293, 1741, 1771
Bsc4I CCNNNNNNNGG 3 cut(s) 455, 1201, 1618
Bse118I RCCGGY 1 cut(s) 160
Bse1I ACTGG 1 cut(s) 599
Bse3DI GCAATG 1 cut(s) 1490
BseBI CCWGG 3 cut(s) 179, 465, 492
BseDI CCNNGG 7 cut(s) 178, 331, 454, 531, 1195, 1258, 1410
BseGI GGATG 4 cut(s) 694, 859, 1608, 1674
BseLI CCNNNNNNNGG 3 cut(s) 455, 1201, 1618
BseMI GCAATG 1 cut(s) 1490
BseMII CTCAG 3 cut(s) 384, 692, 824
BseNI ACTGG 1 cut(s) 599
BseRI GAGGAG 1 cut(s) 87
BseSI GKGCMC 1 cut(s) 1052
BseXI GCAGC 2 cut(s) 123, 1409
BseYI CCCAGC 2 cut(s) 121, 931
BshFI GGCC 3 cut(s) 120, 490, 944
BshTI ACCGGT 1 cut(s) 160
BsiHKAI GWGCWC 4 cut(s) 724, 868, 1123, 1367
BsiSI CCGG 2 cut(s) 130, 161
BslFI GGGAC 1 cut(s) 1634
BslI CCNNNNNNNGG 3 cut(s) 455, 1201, 1618
BsmAI GTCTC 1 cut(s) 312
BsmFI GGGAC 1 cut(s) 1634
BsnI GGCC 3 cut(s) 120, 490, 944
Bsp1286I GDGCHC 6 cut(s) 449, 724, 868, 1052, 1123, 1367
Bsp143I GATC 5 cut(s) 187, 400, 667, 1372, 1572
Bsp19I CCATGG 2 cut(s) 454, 1410
BspANI GGCC 3 cut(s) 120, 490, 944
BspCNI CTCAG 3 cut(s) 385, 691, 825
BspLI GGNNCC 3 cut(s) 134, 943, 1408
BspMAI CTGCAG 1 cut(s) 1399
BspPI GGATC 3 cut(s) 662, 1380, 1580
BspTI CTTAAG 1 cut(s) 869
BsrDI GCAATG 1 cut(s) 1490
BsrFI RCCGGY 1 cut(s) 160
BsrI ACTGG 1 cut(s) 599
BssAI RCCGGY 1 cut(s) 160
BssECI CCNNGG 7 cut(s) 178, 331, 454, 531, 1195, 1258, 1410
BssMI GATC 5 cut(s) 187, 400, 667, 1372, 1572
BssT1I CCWWGG 5 cut(s) 454, 531, 1195, 1258, 1410
Bst2UI CCWGG 3 cut(s) 179, 465, 492
Bst4CI ACNGT 7 cut(s) 335, 754, 955, 1100, 1148, 1697, 1714
Bst6I CTCTTC 1 cut(s) 618
BstAFI CTTAAG 1 cut(s) 869
BstDEI CTNAG 6 cut(s) 240, 393, 678, 833, 1585, 1644
BstDSI CCRYGG 3 cut(s) 331, 454, 1410
BstEII GGTNACC 1 cut(s) 173
BstF5I GGATG 4 cut(s) 694, 859, 1608, 1674
BstH2I RGCGCY 1 cut(s) 1383
BstHHI GCGC 1 cut(s) 1382
BstKTI GATC 5 cut(s) 190, 403, 670, 1375, 1575
BstMAI GTCTC 1 cut(s) 312
BstMBI GATC 5 cut(s) 187, 400, 667, 1372, 1572
BstMWI GCNNNNNNNGC 3 cut(s) 117, 226, 366
BstNI CCWGG 3 cut(s) 179, 465, 492
BstPI GGTNACC 1 cut(s) 173
BstSCI CCNGG 3 cut(s) 177, 463, 490
BstSFI CTRYAG 4 cut(s) 799, 859, 1395, 1477
BstSLI GKGCMC 1 cut(s) 1052
BstV1I GCAGC 2 cut(s) 123, 1409
BstV2I GAAGAC 2 cut(s) 1426, 1545
BstX2I RGATCY 2 cut(s) 667, 1572
BstYI RGATCY 2 cut(s) 667, 1572
BsuI GTATCC 3 cut(s) 554, 1396, 1695
BsuRI GGCC 3 cut(s) 120, 490, 944
BtgI CCRYGG 3 cut(s) 331, 454, 1410
BtsCI GGATG 4 cut(s) 694, 859, 1608, 1674
BtsI GCAGTG 1 cut(s) 215
BtsIMutI CAGTG 3 cut(s) 215, 592, 686
CfoI GCGC 1 cut(s) 1382
Cfr10I RCCGGY 1 cut(s) 160
Cfr13I GGNCC 6 cut(s) 119, 163, 488, 597, 942, 1148
Csp6I GTAC 3 cut(s) 528, 692, 1082
CspAI ACCGGT 1 cut(s) 160
CviQI GTAC 3 cut(s) 528, 692, 1082
DdeI CTNAG 6 cut(s) 240, 393, 678, 833, 1585, 1644
DpnI GATC 5 cut(s) 189, 402, 669, 1374, 1574
DpnII GATC 5 cut(s) 187, 400, 667, 1372, 1572
DraI TTTAAA 2 cut(s) 961, 1528
Eam1104I CTCTTC 1 cut(s) 618
EarI CTCTTC 1 cut(s) 618
Ecl136II GAGCTC 3 cut(s) 722, 866, 1121
Eco130I CCWWGG 5 cut(s) 454, 531, 1195, 1258, 1410
Eco24I GRGCYC 4 cut(s) 449, 724, 868, 1123
Eco47I GGWCC 3 cut(s) 163, 597, 1148
Eco53kI GAGCTC 3 cut(s) 722, 866, 1121
Eco57I CTGAAG 1 cut(s) 662
Eco91I GGTNACC 1 cut(s) 173
EcoICRI GAGCTC 3 cut(s) 722, 866, 1121
EcoO109I RGGNCCY 1 cut(s) 942
EcoO65I GGTNACC 1 cut(s) 173
EcoRI GAATTC 2 cut(s) 650, 1133
EcoRII CCWGG 3 cut(s) 177, 463, 490
EcoT14I CCWWGG 5 cut(s) 454, 531, 1195, 1258, 1410
EcoT38I GRGCYC 4 cut(s) 449, 724, 868, 1123
ErhI CCWWGG 5 cut(s) 454, 531, 1195, 1258, 1410
FalI AAGNNNNNCTT 4 cut(s) 540, 572, 954, 986
FaqI GGGAC 1 cut(s) 1634
FblI GTMKAC 1 cut(s) 1557
Fnu4HI GCNGC 2 cut(s) 112, 1398
FokI GGATG 4 cut(s) 701, 866, 1595, 1661
FriOI GRGCYC 4 cut(s) 449, 724, 868, 1123
Fsp4HI GCNGC 2 cut(s) 112, 1398
FspBI CTAG 3 cut(s) 518, 1313, 1368
GlaI GCGC 1 cut(s) 1381
GluI GCNGC 2 cut(s) 112, 1398
GsaI CCCAGC 2 cut(s) 125, 935
GsuI CTGGAG 1 cut(s) 1139
HaeII RGCGCY 1 cut(s) 1383
HaeIII GGCC 3 cut(s) 120, 490, 944
HapII CCGG 2 cut(s) 130, 161
HhaI GCGC 1 cut(s) 1382
Hin6I GCGC 1 cut(s) 1380
HinP1I GCGC 1 cut(s) 1380
HincII GTYRAC 1 cut(s) 614
HindII GTYRAC 1 cut(s) 614
HindIII AAGCTT 1 cut(s) 367
HinfI GANTC 2 cut(s) 416, 1541
HpaII CCGG 2 cut(s) 130, 161
HphI GGTGA 2 cut(s) 1247, 1751
Hpy166II GTNNAC 5 cut(s) 614, 968, 1151, 1268, 1558
Hpy188I TCNGA 6 cut(s) 9, 213, 663, 979, 1342, 1749
Hpy188III TCNNGA 4 cut(s) 37, 83, 1156, 1499
Hpy8I GTNNAC 5 cut(s) 614, 968, 1151, 1268, 1558
HpyAV CCTTC 6 cut(s) 355, 622, 1613, 1619, 1710, 1730
HpyCH4III ACNGT 7 cut(s) 335, 754, 955, 1100, 1148, 1697, 1714
HpyCH4IV ACGT 1 cut(s) 1455
HpyF10VI GCNNNNNNNGC 3 cut(s) 117, 226, 366
HpyF3I CTNAG 6 cut(s) 240, 393, 678, 833, 1585, 1644
HpySE526I ACGT 1 cut(s) 1455
HspAI GCGC 1 cut(s) 1380
Kzo9I GATC 5 cut(s) 187, 400, 667, 1372, 1572
LmnI GCTCC 3 cut(s) 39, 719, 727
Lsp1109I GCAGC 2 cut(s) 123, 1409
LweI GCATC 4 cut(s) 216, 541, 1617, 1683
MaeI CTAG 3 cut(s) 518, 1313, 1368
MaeII ACGT 1 cut(s) 1455
MaeIII GTNAC 5 cut(s) 173, 707, 1094, 1451, 1739
MalI GATC 5 cut(s) 189, 402, 669, 1374, 1574
MboI GATC 5 cut(s) 187, 400, 667, 1372, 1572
MfeI CAATTG 1 cut(s) 279
MflI RGATCY 2 cut(s) 667, 1572
MhlI GDGCHC 6 cut(s) 449, 724, 868, 1052, 1123, 1367
MlyI GAGTC 1 cut(s) 1535
MmeI TCCRAC 3 cut(s) 32, 749, 1707
MroXI GAANNNNTTC 2 cut(s) 650, 1251
MseI TTAA 7 cut(s) 147, 840, 870, 900, 960, 1038, 1527
MslI CAYNNNNRTG 2 cut(s) 477, 1074
MspA1I CMGCKG 1 cut(s) 832
MspCI CTTAAG 1 cut(s) 869
MspI CCGG 2 cut(s) 130, 161
MspR9I CCNGG 3 cut(s) 179, 465, 492
MunI CAATTG 1 cut(s) 279
MvaI CCWGG 3 cut(s) 179, 465, 492
MwoI GCNNNNNNNGC 3 cut(s) 117, 226, 366
NcoI CCATGG 2 cut(s) 454, 1410
NdeII GATC 5 cut(s) 187, 400, 667, 1372, 1572
NlaIV GGNNCC 3 cut(s) 134, 943, 1408
NmuCI GTSAC 2 cut(s) 707, 1739
PdmI GAANNNNTTC 2 cut(s) 650, 1251
PfeI GAWTC 1 cut(s) 416
PinAI ACCGGT 1 cut(s) 160
PkrI GCNGC 2 cut(s) 113, 1399
PleI GAGTC 1 cut(s) 1535
PpsI GAGTC 1 cut(s) 1535
PshBI ATTAAT 1 cut(s) 1038
Psp124BI GAGCTC 3 cut(s) 724, 868, 1123
Psp6I CCWGG 3 cut(s) 177, 463, 490
PspEI GGTNACC 1 cut(s) 173
PspFI CCCAGC 2 cut(s) 121, 931
PspGI CCWGG 3 cut(s) 177, 463, 490
PspN4I GGNNCC 3 cut(s) 134, 943, 1408
PspPI GGNCC 6 cut(s) 119, 163, 488, 597, 942, 1148
PstI CTGCAG 1 cut(s) 1399
PsuI RGATCY 2 cut(s) 667, 1572
PvuII CAGCTG 1 cut(s) 832
RsaI GTAC 3 cut(s) 529, 693, 1083
RsaNI GTAC 3 cut(s) 528, 692, 1082
RseI CAYNNNNRTG 2 cut(s) 477, 1074
SacI GAGCTC 3 cut(s) 724, 868, 1123
SaqAI TTAA 7 cut(s) 147, 840, 870, 900, 960, 1038, 1527
SatI GCNGC 2 cut(s) 112, 1398
Sau3AI GATC 5 cut(s) 187, 400, 667, 1372, 1572
Sau96I GGNCC 6 cut(s) 119, 163, 488, 597, 942, 1148
SchI GAGTC 1 cut(s) 1535
ScrFI CCNGG 3 cut(s) 179, 465, 492
SduI GDGCHC 6 cut(s) 449, 724, 868, 1052, 1123, 1367
SfaNI GCATC 4 cut(s) 216, 541, 1617, 1683
SfcI CTRYAG 4 cut(s) 799, 859, 1395, 1477
SinI GGWCC 3 cut(s) 163, 597, 1148
SmiMI CAYNNNNRTG 2 cut(s) 477, 1074
SmlI CTYRAG 4 cut(s) 221, 577, 869, 1438
SmoI CTYRAG 4 cut(s) 221, 577, 869, 1438
SspMI CTAG 3 cut(s) 518, 1313, 1368
SstI GAGCTC 3 cut(s) 724, 868, 1123
StyD4I CCNGG 3 cut(s) 177, 463, 490
StyI CCWWGG 5 cut(s) 454, 531, 1195, 1258, 1410
TaaI ACNGT 7 cut(s) 335, 754, 955, 1100, 1148, 1697, 1714
TaiI ACGT 1 cut(s) 1458
TaqI TCGA 2 cut(s) 142, 1787
TfiI GAWTC 1 cut(s) 416
Tru1I TTAA 7 cut(s) 147, 840, 870, 900, 960, 1038, 1527
Tru9I TTAA 7 cut(s) 147, 840, 870, 900, 960, 1038, 1527
TscAI CASTG 3 cut(s) 222, 599, 686
TseFI GTSAC 2 cut(s) 707, 1739
TseI GCWGC 2 cut(s) 111, 1397
Tsp45I GTSAC 2 cut(s) 707, 1739
TspDTI ATGAA 6 cut(s) 183, 663, 1056, 1146, 1721, 1770
TspRI CASTG 3 cut(s) 222, 599, 686
Vha464I CTTAAG 1 cut(s) 869
VpaK11BI GGWCC 3 cut(s) 163, 597, 1148
VspI ATTAAT 1 cut(s) 1038
XapI RAATTY 5 cut(s) 650, 980, 1133, 1159, 1522
XmiI GTMKAC 1 cut(s) 1557
XmnI GAANNNNTTC 2 cut(s) 650, 1251
XspI CTAG 3 cut(s) 518, 1313, 1368
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.