Rorug05G0236200

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000107
Physical Location & Seq
Reverse (-)
24772692 .. 24774281
1590 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0236200.1

Sequence Viewer

Length: 1374 bp
ATGGAGGAAGAACTGGGAAGTATAGTGAGACGACTGGTCCTTTCTGAGGAGGAGGCACAAGAGATCGTTTTACCGGATGAACCTGGGAGTTGGAGGCCTAAGAGGGCACTTTTCGCGATCTCTGCCACGGATGGCAGGGAAGATCTACTCAAGATTTCATTGCATTGGCAGTTCTTCTGGGTTAGGGCGTGGGCCATCCCACCACTTTACATGGAGGAGGAGACCGGTCGGAGGATTGGGAATGCGGTTGGTAGATTTGTGCGTATGGAGGATCCTGTTGACAGAATTTACTTGGGGACGACAATGAAGGTTAGGATTTTATTGGACACTAATAAACCACTGAGGCGGATTGCAACGATCCGGCTTCCAGGACAAACTACAGCTTCGTGTTTCGAATTGGATTATCTAAAGTTACCAGTGTTTTGTCTCTACTGTGGAATGTTGAACCATGATTCAAATCACTGCCACTTACATAGTACTGGCATGATTCTGGAGAAGCAGTTTGATGTGTTGTTATGTGCGGAGCGGAAGGATAAGTGGCTTTTGGAGCAGGAGGCTCGTCTGAGAGCGGAGGCGATGGAGAGATTAGTTAGAGAAGGCAGACGCTATGGTTTTACCCAAAAGGACAGAGGTGGTTGGTCTATGCAGGCGCCGGAGTTCCCTCTGTCCGGCATGGTCCGACGGCGGTCGGAGATGGAGGAGTTTTCTGAGACCGACGGTGGGGGGGGGGGGGAAGATATGATGGTAGATGGGGCACAAACCTGTGCGGAGGCGGAGAGTCGCCGTGGACCTAAGCGACGGAGGATGGTGACGGTGGGGGAAGAGTACCCTAATTTGGGACTGCAGAATTTACGGGATATTGAAGTTAAATGCTGTCCTGAATTACCGCAGGCACTTATTGTTAATAATACTGAGGTAGGGAAGGACCAAGATAATTTGGGGGGATCTGAGGAAGTCAATCTGCATGTCTCCACAATTTTTGGGCGTGAAATCAGCTTCCCACCTAAGCAGATTTCGAGCTTGACTGGGCTGACGTCAACTGTGGTTGTGGAAAGGGAGGATGGGTCTGGGCGTAGACCTGTTCAGCCCATCTCTAGCGAGCAACAGGTTGTACTGGTAGGAAGTGTATTAATGTTGGGTGGGCTGGAGAATGGGTCGGGATGTGCTGACTCTAGTGAGGAGGTGGGTGAGCACGCTGAGCACTTTTCTGAAACTGAGGGTTCTGGGGGCCGGACTGAGGCCGGGAAGGTCCCGGAGATCAAAAGGCCTAAGACCAACAAGCAGACTAGGGGTAAAAGAGTTTTTGCAGTAGGAGGAAGTAAAAAAAGGGAAGCCATTGGTTTTGCAGTCTTCTGGAGATTCTTCAATGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase Pkinase_Tyr

Protein Analysis

457

Amino Acids

51.36

Weight (kDa)

5.74

Isoelectric Point (pI)

57.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCHC_4 PF14392 108 - 156 2.2e-07 Zinc knuckle
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1037
AccB1I GGYRCC 1 cut(s) 649
AccBSI CCGCTC 2 cut(s) 526, 569
AccI GTMKAC 1 cut(s) 1075
AccII CGCG 1 cut(s) 116
AciI CCGC 9 cut(s) 245, 346, 521, 526, 569, 685, 767, 773, 887
AclWI GGATC 4 cut(s) 266, 279, 352, 952
AcsI RAATTY 2 cut(s) 285, 847
AcyI GRCGYC 2 cut(s) 650, 1034
AfaI GTAC 3 cut(s) 478, 827, 1113
AfiI CCNNNNNNNGG 7 cut(s) 46, 231, 668, 720, 835, 836, 1237
AgeI ACCGGT 1 cut(s) 224
AgsI TTSAA 4 cut(s) 445, 456, 863, 1366
AhdI GACNNNNNGTC 1 cut(s) 35
AjnI CCWGG 2 cut(s) 82, 367
AluBI AGCT 3 cut(s) 383, 996, 1020
AluI AGCT 3 cut(s) 383, 996, 1020
Alw21I GWGCWC 2 cut(s) 1194, 1203
Alw26I GTCTC 5 cut(s) 22, 215, 431, 704, 973
AlwI GGATC 4 cut(s) 266, 279, 352, 952
AoxI GGCC 5 cut(s) 95, 192, 1228, 1239, 1265
ApoI RAATTY 2 cut(s) 285, 847
AseI ATTAAT 1 cut(s) 1130
AsiGI ACCGGT 1 cut(s) 224
AspLEI GCGC 1 cut(s) 652
AspS9I GGNCC 7 cut(s) 37, 192, 676, 788, 925, 1228, 1249
AsuC2I CCSGG 2 cut(s) 1243, 1253
AsuHPI GGTGA 2 cut(s) 820, 1199
AsuII TTCGAA 1 cut(s) 393
AvaII GGWCC 5 cut(s) 37, 676, 788, 925, 1249
BaeGI GKGCMC 2 cut(s) 109, 757
BamHI GGATCC 1 cut(s) 271
BanI GGYRCC 1 cut(s) 649
BbsI GAAGAC 1 cut(s) 1342
Bbv12I GWGCWC 2 cut(s) 1194, 1203
BccI CCATC 9 cut(s) 125, 203, 571, 688, 736, 743, 799, 1055, 1097
BceAI ACGGC 2 cut(s) 698, 768
BcgI CGANNNNNNTGC 2 cut(s) 539, 573
BciT130I CCWGG 2 cut(s) 84, 369
BcnI CCSGG 2 cut(s) 1243, 1253
BcoDI GTCTC 5 cut(s) 22, 215, 431, 704, 973
BfaI CTAG 3 cut(s) 1095, 1173, 1287
BfmI CTRYAG 2 cut(s) 378, 842
BfoI RGCGCY 1 cut(s) 653
BglII AGATCT 1 cut(s) 142
BlpI GCTNAGC 1 cut(s) 1197
BmcAI AGTACT 1 cut(s) 478
Bme1390I CCNGG 4 cut(s) 84, 369, 1243, 1253
Bme18I GGWCC 5 cut(s) 37, 676, 788, 925, 1249
BmeRI GACNNNNNGTC 1 cut(s) 35
BmgT120I GGNCC 7 cut(s) 37, 192, 676, 788, 925, 1228, 1249
BmiI GGNNCC 4 cut(s) 273, 651, 1229, 1251
BmrFI CCNGG 4 cut(s) 84, 369, 1243, 1253
BmrI ACTGGG 2 cut(s) 23, 1035
BmuI ACTGGG 2 cut(s) 23, 1035
BoxI GACNNNNGTC 1 cut(s) 685
BpiI GAAGAC 1 cut(s) 1342
BpmI CTGGAG 2 cut(s) 512, 1166
Bpu10I CCTNAGC 2 cut(s) 792, 1005
Bpu1102I GCTNAGC 1 cut(s) 1197
Bpu14I TTCGAA 1 cut(s) 393
BpuEI CTTGAG 1 cut(s) 134
BpuMI CCSGG 2 cut(s) 1243, 1253
BsaBI GATNNNNATC 1 cut(s) 456
BsaHI GRCGYC 2 cut(s) 650, 1034
BsaI GGTCTC 2 cut(s) 215, 704
BsaJI CCNNGG 3 cut(s) 83, 126, 784
BsaWI WCCGGW 2 cut(s) 73, 224
BsaXI ACNNNNNCTCC 6 cut(s) 485, 515, 1049, 1079, 1139, 1169
Bsc4I CCNNNNNNNGG 7 cut(s) 46, 231, 668, 720, 835, 836, 1237
Bse118I RCCGGY 1 cut(s) 224
Bse1I ACTGG 6 cut(s) 18, 39, 416, 484, 1030, 1119
Bse3DI GCAATG 1 cut(s) 158
Bse8I GATNNNNATC 1 cut(s) 456
BseBI CCWGG 2 cut(s) 84, 369
BseDI CCNNGG 3 cut(s) 83, 126, 784
BseGI GGATG 6 cut(s) 82, 136, 195, 810, 1066, 1166
BseJI GATNNNNATC 1 cut(s) 456
BseLI CCNNNNNNNGG 7 cut(s) 46, 231, 668, 720, 835, 836, 1237
BseMI GCAATG 1 cut(s) 158
BseMII CTCAG 9 cut(s) 36, 332, 554, 699, 903, 939, 1188, 1206, 1227
BseNI ACTGG 6 cut(s) 18, 39, 416, 484, 1030, 1119
BseRI GAGGAG 6 cut(s) 62, 65, 230, 233, 713, 1193
BseSI GKGCMC 2 cut(s) 109, 757
Bsh1236I CGCG 1 cut(s) 116
Bsh1285I CGRYCG 2 cut(s) 229, 689
BshFI GGCC 5 cut(s) 97, 194, 1230, 1241, 1267
BshNI GGYRCC 1 cut(s) 649
BshTI ACCGGT 1 cut(s) 224
BsiEI CGRYCG 2 cut(s) 229, 689
BsiHKAI GWGCWC 2 cut(s) 1194, 1203
BsiSI CCGG 8 cut(s) 74, 225, 361, 653, 669, 1231, 1242, 1253
BslFI GGGAC 3 cut(s) 310, 852, 1235
BslI CCNNNNNNNGG 7 cut(s) 46, 231, 668, 720, 835, 836, 1237
BsmAI GTCTC 5 cut(s) 22, 215, 431, 704, 973
BsmBI CGTCTC 1 cut(s) 22
BsmFI GGGAC 3 cut(s) 310, 852, 1235
BsmI GAATGC 1 cut(s) 247
BsnI GGCC 5 cut(s) 97, 194, 1230, 1241, 1267
Bso31I GGTCTC 2 cut(s) 215, 704
Bsp119I TTCGAA 1 cut(s) 393
Bsp1286I GDGCHC 4 cut(s) 109, 757, 1194, 1203
Bsp143I GATC 7 cut(s) 63, 117, 142, 271, 357, 944, 1257
Bsp1720I GCTNAGC 1 cut(s) 1197
Bsp68I TCGCGA 1 cut(s) 116
BspACI CCGC 9 cut(s) 245, 346, 521, 526, 569, 685, 767, 773, 887
BspANI GGCC 5 cut(s) 97, 194, 1230, 1241, 1267
BspCNI CTCAG 9 cut(s) 37, 333, 555, 700, 904, 940, 1189, 1207, 1228
BspFNI CGCG 1 cut(s) 116
BspLI GGNNCC 4 cut(s) 273, 651, 1229, 1251
BspMAI CTGCAG 1 cut(s) 846
BspPI GGATC 4 cut(s) 266, 279, 352, 952
BspT104I TTCGAA 1 cut(s) 393
BspT107I GGYRCC 1 cut(s) 649
BspTNI GGTCTC 2 cut(s) 215, 704
BsrBI CCGCTC 2 cut(s) 526, 569
BsrDI GCAATG 1 cut(s) 158
BsrFI RCCGGY 1 cut(s) 224
BsrI ACTGG 6 cut(s) 18, 39, 416, 484, 1030, 1119
BssAI RCCGGY 1 cut(s) 224
BssECI CCNNGG 3 cut(s) 83, 126, 784
BssMI GATC 7 cut(s) 63, 117, 142, 271, 357, 944, 1257
BssNI GRCGYC 2 cut(s) 650, 1034
Bst2UI CCWGG 2 cut(s) 84, 369
Bst4CI ACNGT 4 cut(s) 434, 719, 814, 1042
Bst6I CTCTTC 1 cut(s) 816
BstACI GRCGYC 2 cut(s) 650, 1034
BstBI TTCGAA 1 cut(s) 393
BstC8I GCNNGC 4 cut(s) 648, 891, 1100, 1194
BstDSI CCRYGG 2 cut(s) 126, 784
BstENI CCTNNNNNAGG 1 cut(s) 44
BstF5I GGATG 6 cut(s) 82, 136, 195, 810, 1066, 1166
BstFNI CGCG 1 cut(s) 116
BstH2I RGCGCY 1 cut(s) 653
BstHHI GCGC 1 cut(s) 652
BstKTI GATC 7 cut(s) 66, 120, 145, 274, 360, 947, 1260
BstMAI GTCTC 5 cut(s) 22, 215, 431, 704, 973
BstMBI GATC 7 cut(s) 63, 117, 142, 271, 357, 944, 1257
BstMCI CGRYCG 2 cut(s) 229, 689
BstMWI GCNNNNNNNGC 4 cut(s) 113, 122, 547, 1198
BstNI CCWGG 2 cut(s) 84, 369
BstNSI RCATGY 1 cut(s) 968
BstPAI GACNNNNGTC 1 cut(s) 685
BstSCI CCNGG 4 cut(s) 82, 367, 1241, 1251
BstSFI CTRYAG 2 cut(s) 378, 842
BstSLI GKGCMC 2 cut(s) 109, 757
BstUI CGCG 1 cut(s) 116
BstV2I GAAGAC 1 cut(s) 1342
BstX2I RGATCY 3 cut(s) 142, 271, 944
BstYI RGATCY 3 cut(s) 142, 271, 944
BsuRI GGCC 5 cut(s) 97, 194, 1230, 1241, 1267
BtgI CCRYGG 2 cut(s) 126, 784
BtgZI GCGATG 1 cut(s) 590
BtsCI GGATG 6 cut(s) 82, 136, 195, 810, 1066, 1166
BtsI GCAGTG 1 cut(s) 460
BtsIMutI CAGTG 3 cut(s) 338, 423, 460
BtuMI TCGCGA 1 cut(s) 116
Cac8I GCNNGC 4 cut(s) 648, 891, 1100, 1194
CfoI GCGC 1 cut(s) 652
Cfr10I RCCGGY 1 cut(s) 224
Cfr13I GGNCC 7 cut(s) 37, 192, 676, 788, 925, 1228, 1249
CseI GACGC 1 cut(s) 612
Csp6I GTAC 3 cut(s) 477, 826, 1112
CspAI ACCGGT 1 cut(s) 224
CspCI CAANNNNNGTGG 2 cut(s) 961, 996
CviAII CATG 5 cut(s) 211, 449, 484, 673, 965
CviQI GTAC 3 cut(s) 477, 826, 1112
DinI GGCGCC 1 cut(s) 651
DpnI GATC 7 cut(s) 65, 119, 144, 273, 359, 946, 1259
DpnII GATC 7 cut(s) 63, 117, 142, 271, 357, 944, 1257
DriI GACNNNNNGTC 1 cut(s) 35
Eam1104I CTCTTC 1 cut(s) 816
Eam1105I GACNNNNNGTC 1 cut(s) 35
EarI CTCTTC 1 cut(s) 816
EciI GGCGGA 2 cut(s) 361, 788
Eco147I AGGCCT 2 cut(s) 97, 1267
Eco31I GGTCTC 2 cut(s) 215, 704
Eco47I GGWCC 5 cut(s) 37, 676, 788, 925, 1249
EcoNI CCTNNNNNAGG 1 cut(s) 44
EcoO109I RGGNCCY 1 cut(s) 1249
EcoRII CCWGG 2 cut(s) 82, 367
EgeI GGCGCC 1 cut(s) 651
EheI GGCGCC 1 cut(s) 651
Esp3I CGTCTC 1 cut(s) 22
FaeI CATG 5 cut(s) 214, 452, 487, 676, 968
FaqI GGGAC 3 cut(s) 310, 852, 1235
FatI CATG 5 cut(s) 210, 448, 483, 672, 964
FblI GTMKAC 1 cut(s) 1075
FokI GGATG 6 cut(s) 89, 143, 182, 817, 1073, 1173
FspBI CTAG 3 cut(s) 1095, 1173, 1287
GlaI GCGC 1 cut(s) 651
GsuI CTGGAG 2 cut(s) 512, 1166
HaeII RGCGCY 1 cut(s) 653
HaeIII GGCC 5 cut(s) 97, 194, 1230, 1241, 1267
HapII CCGG 8 cut(s) 74, 225, 361, 653, 669, 1231, 1242, 1253
HgaI GACGC 1 cut(s) 612
HhaI GCGC 1 cut(s) 652
Hin1I GRCGYC 2 cut(s) 650, 1034
Hin1II CATG 5 cut(s) 214, 452, 487, 676, 968
Hin6I GCGC 1 cut(s) 650
HinP1I GCGC 1 cut(s) 650
HincII GTYRAC 2 cut(s) 280, 1038
HindII GTYRAC 2 cut(s) 280, 1038
HinfI GANTC 5 cut(s) 452, 487, 778, 1169, 1359
HpaII CCGG 8 cut(s) 74, 225, 361, 653, 669, 1231, 1242, 1253
HphI GGTGA 2 cut(s) 820, 1199
Hpy166II GTNNAC 4 cut(s) 280, 788, 1038, 1076
Hpy188I TCNGA 8 cut(s) 46, 231, 564, 680, 691, 709, 949, 1210
Hpy188III TCNNGA 6 cut(s) 115, 151, 491, 878, 1158, 1354
Hpy8I GTNNAC 4 cut(s) 280, 788, 1038, 1076
Hpy99I CGWCG 3 cut(s) 684, 719, 801
HpyAV CCTTC 5 cut(s) 301, 523, 590, 916, 1240
HpyCH4III ACNGT 4 cut(s) 434, 719, 814, 1042
HpyCH4IV ACGT 1 cut(s) 1034
HpyCH4V TGCA 7 cut(s) 163, 353, 646, 844, 964, 1307, 1346
HpyF10VI GCNNNNNNNGC 4 cut(s) 113, 122, 547, 1198
HpySE526I ACGT 1 cut(s) 1034
Hsp92I GRCGYC 2 cut(s) 650, 1034
Hsp92II CATG 5 cut(s) 214, 452, 487, 676, 968
HspAI GCGC 1 cut(s) 650
KasI GGCGCC 1 cut(s) 649
Kzo9I GATC 7 cut(s) 63, 117, 142, 271, 357, 944, 1257
LmnI GCTCC 2 cut(s) 523, 547
MaeI CTAG 3 cut(s) 1095, 1173, 1287
MaeII ACGT 1 cut(s) 1034
MaeIII GTNAC 2 cut(s) 411, 808
MalI GATC 7 cut(s) 65, 119, 144, 273, 359, 946, 1259
MbiI CCGCTC 2 cut(s) 526, 569
MboI GATC 7 cut(s) 63, 117, 142, 271, 357, 944, 1257
MboII GAAGA 7 cut(s) 20, 152, 166, 746, 833, 1342, 1354
MflI RGATCY 3 cut(s) 142, 271, 944
MhlI GDGCHC 4 cut(s) 109, 757, 1194, 1203
MluCI AATT 7 cut(s) 285, 395, 832, 847, 881, 934, 975
Mly113I GGCGCC 1 cut(s) 650
MlyI GAGTC 2 cut(s) 787, 1163
MmeI TCCRAC 4 cut(s) 71, 209, 669, 703
MseI TTAA 3 cut(s) 867, 903, 1130
MspI CCGG 8 cut(s) 74, 225, 361, 653, 669, 1231, 1242, 1253
MspR9I CCNGG 4 cut(s) 84, 369, 1243, 1253
Mva1269I GAATGC 1 cut(s) 247
MvaI CCWGG 2 cut(s) 84, 369
MvnI CGCG 1 cut(s) 116
MwoI GCNNNNNNNGC 4 cut(s) 113, 122, 547, 1198
NarI GGCGCC 1 cut(s) 650
NciI CCSGG 2 cut(s) 1243, 1253
NdeII GATC 7 cut(s) 63, 117, 142, 271, 357, 944, 1257
NlaIII CATG 5 cut(s) 214, 452, 487, 676, 968
NlaIV GGNNCC 4 cut(s) 273, 651, 1229, 1251
NmuCI GTSAC 1 cut(s) 808
NruI TCGCGA 1 cut(s) 116
NspI RCATGY 1 cut(s) 968
NspV TTCGAA 1 cut(s) 393
PceI AGGCCT 2 cut(s) 97, 1267
PctI GAATGC 1 cut(s) 247
PfeI GAWTC 3 cut(s) 452, 487, 1359
PfoI TCCNGGA 2 cut(s) 367, 1251
PinAI ACCGGT 1 cut(s) 224
PleI GAGTC 2 cut(s) 786, 1163
PluTI GGCGCC 1 cut(s) 653
PpsI GAGTC 2 cut(s) 786, 1163
PpuMI RGGWCCY 1 cut(s) 1249
PshAI GACNNNNGTC 1 cut(s) 685
PshBI ATTAAT 1 cut(s) 1130
Psp5II RGGWCCY 1 cut(s) 1249
Psp6I CCWGG 2 cut(s) 82, 367
PspGI CCWGG 2 cut(s) 82, 367
PspN4I GGNNCC 4 cut(s) 273, 651, 1229, 1251
PspPI GGNCC 7 cut(s) 37, 192, 676, 788, 925, 1228, 1249
PspPPI RGGWCCY 1 cut(s) 1249
PstI CTGCAG 1 cut(s) 846
PsuI RGATCY 3 cut(s) 142, 271, 944
RruI TCGCGA 1 cut(s) 116
RsaI GTAC 3 cut(s) 478, 827, 1113
RsaNI GTAC 3 cut(s) 477, 826, 1112
SaqAI TTAA 3 cut(s) 867, 903, 1130
Sau3AI GATC 7 cut(s) 63, 117, 142, 271, 357, 944, 1257
Sau96I GGNCC 7 cut(s) 37, 192, 676, 788, 925, 1228, 1249
ScaI AGTACT 1 cut(s) 478
SchI GAGTC 2 cut(s) 787, 1163
ScrFI CCNGG 4 cut(s) 84, 369, 1243, 1253
SduI GDGCHC 4 cut(s) 109, 757, 1194, 1203
SfcI CTRYAG 2 cut(s) 378, 842
SfoI GGCGCC 1 cut(s) 651
SfuI TTCGAA 1 cut(s) 393
SinI GGWCC 5 cut(s) 37, 676, 788, 925, 1249
SmlI CTYRAG 1 cut(s) 149
SmoI CTYRAG 1 cut(s) 149
Sse9I AATT 7 cut(s) 285, 395, 832, 847, 881, 934, 975
SseBI AGGCCT 2 cut(s) 97, 1267
SsiI CCGC 9 cut(s) 245, 346, 521, 526, 569, 685, 767, 773, 887
SspDI GGCGCC 1 cut(s) 649
SspMI CTAG 3 cut(s) 1095, 1173, 1287
StuI AGGCCT 2 cut(s) 97, 1267
StyD4I CCNGG 4 cut(s) 82, 367, 1241, 1251
TaaI ACNGT 4 cut(s) 434, 719, 814, 1042
TaiI ACGT 1 cut(s) 1037
TaqI TCGA 2 cut(s) 393, 1016
TaqII GACCGA 1 cut(s) 728
TasI AATT 7 cut(s) 285, 395, 832, 847, 881, 934, 975
TatI WGTACW 2 cut(s) 476, 1111
TfiI GAWTC 3 cut(s) 452, 487, 1359
Tru1I TTAA 3 cut(s) 867, 903, 1130
Tru9I TTAA 3 cut(s) 867, 903, 1130
TscAI CASTG 3 cut(s) 345, 423, 467
TseFI GTSAC 1 cut(s) 808
Tsp45I GTSAC 1 cut(s) 808
TspDTI ATGAA 3 cut(s) 93, 147, 320
TspGWI ACGGA 2 cut(s) 143, 814
TspRI CASTG 3 cut(s) 345, 423, 467
VpaK11BI GGWCC 5 cut(s) 37, 676, 788, 925, 1249
VspI ATTAAT 1 cut(s) 1130
XagI CCTNNNNNAGG 1 cut(s) 44
XapI RAATTY 2 cut(s) 285, 847
XceI RCATGY 1 cut(s) 968
XmiI GTMKAC 1 cut(s) 1075
XspI CTAG 3 cut(s) 1095, 1173, 1287
ZraI GACGTC 1 cut(s) 1035
ZrmI AGTACT 1 cut(s) 478
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.