Rw1G011620

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0000107
Physical Location & Seq
Reverse (-)
26023841 .. 26025843
2003 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G011620.1

Sequence Viewer

Length: 1728 bp
ATGGAAGCTAGTACCTCAGAAATTCTTATTTCTTTCTTTTTTCTATCTGTCATGGCATTCTTACAAGGGATTGGAGCATCTCAAAATGCCTGCACAGAATCCATGTGTTCTGATAATGCCCCGGCTATCCACGTCCCATTCGGCCTCAGATATCATGACCCGTCTACAGTTCTTGATGAGCAGCAGAGTGTACTAGCAAAATTCTATGTCAAACACATCGATTATATCCATCAAAGCATCGAAGTACACTCTAGCAACCCCTATGTCGACTGCCTGTTGCTAAAGCCTTTCGAAATGCCAATTTTCCCCTTCTCCTTGTACGTCTCAGAAATGAATTACTTAGATAACTTTACCTTGTTACGTTGTCCTACTGAATTTGAAATAGATACATGGGGCGAAGTCCGGTGCCTTAGTCACTCAGCTGCCTACAGAATTAAGATCTTTTATTCTGACCGTTCAGTAGTCCATGAGGCACCGTTCATACAGTCTTGTACAAAGATGTATGATGTTCTATCATTTCCATCGGACGGTGCAAGCTACTTATATTTGAATTGGTCAACACCAAATTGTACAGAATGTGAAGCAAGGGGTAAGAGGTGTAGATTCAACAGCAATGGCACCAAAAGTGGAATTGAATGTACTGACTTGGGAAAAATAAGCACAACAAGAACAAACTTCGAGCCTACAGGTCAGTTTTCAAATAACTGGTCTTTTCTGGTGTTCGTGATTCTGTTACTAATGCCTTTTTCGGTCTTCTGTGTCTACGGCCGGGATATCAAGGAAAAGGAAAATCAGTTACGAATTGAAAGGTTTTTAGAGGATTACAAAGCTCTCAAGCCAAGTAGATATTCTTATGCGGATATTAAGAGAATTACAAATCATTTCAAGCACAAGATCGGAAAACTTTCTTCGGAAGTCTTTGTTGCTGTAAAAGTCCTTAACAATTCAAGGGGGGATGGAGAAGAGTTCATAAATGAAGTGGGAACAATGGGTCGTATCCACCATGTCAATGTGGTTCGCTTGGTTGGCTTCTGCGCTGATGGATTTAGACGCGCTCTGGTGTACGAGTTCTCGCCCAATGGCGCACTACATGAATACATTTCCTCAGCAGATAATAAGAATGGCTTTCTTGGTTGGAATAAGTATCTAGATATTTCTATAGGAATAGCAAAAGGAATTGAATATCTACACCAAGGATGCGATCAACGAATTCTCCATTTCGACATCAAACCCCACAATGTTTTGCTTGACCATAACTTGACTCCGAAAATTTCTGATTTTGGTTTGTCAAAGTTATGTGCCAAGGATCAAAGTATAGTGTCAATGACTACTGCTAGGGGGACAATTGGATACATTGCACCGGAAGTGTTCTCCAGGAATTTCGGGAATGTATCTTATAAGTCAGATGTCTATAGTTTTGGAATGTTGTTGCTTGAGATTGTAGGGGGGAGGAACAATAAGGGTGCAGATCTGGACTCCGGTAATGACGTTTACTACCCAGAATGGATTTACAATCTTCTAGAAGGAGGAGAAGATGTCCGAGTCCGAATTGAGGAGGAAGGAGATGCTATAATTGCAAAGAAACTTGCAGTTGTTGGGCTTTGGTGCATCCAATGGCACCCGGTGGACCGTCCATCCATGAAAGTAGTTGTCCAAATGTTGGAAGGAAGAGAAAATTTAGAAATGCCTCCCAATCCTTTTGGCTCTACAGATCATACAACAACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase Pkinase_Tyr

Protein Analysis

575

Amino Acids

65.16

Weight (kDa)

5.86

Isoelectric Point (pI)

43.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 303 - 553 7.2e-38 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 303 - 551 2.9e-36 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1398
AccB1I GGYRCC 4 cut(s) 405, 472, 617, 1617
AccB7I CCANNNNNTGG 1 cut(s) 1660
AccI GTMKAC 3 cut(s) 164, 267, 762
AccII CGCG 1 cut(s) 1053
AciI CCGC 1 cut(s) 857
AclWI GGATC 1 cut(s) 1314
AcoI YGGCCR 1 cut(s) 766
AcsI RAATTY 7 cut(s) 21, 200, 374, 1209, 1269, 1378, 1675
AdeI CACNNNGTG 1 cut(s) 1624
AfaI GTAC 8 cut(s) 13, 192, 246, 320, 493, 571, 640, 1064
AfiI CCNNNNNNNGG 3 cut(s) 527, 1552, 1660
AgsI TTSAA 9 cut(s) 380, 550, 607, 635, 699, 806, 886, 948, 1181
AjiI CACGTC 1 cut(s) 133
AjnI CCWGG 1 cut(s) 1373
AjuI GAANNNNNNNTTGG 2 cut(s) 832, 864
AluBI AGCT 4 cut(s) 8, 422, 537, 830
AluI AGCT 4 cut(s) 8, 422, 537, 830
Alw26I GTCTC 1 cut(s) 328
AlwI GGATC 1 cut(s) 1314
AoxI GGCC 2 cut(s) 142, 766
ApeKI GCWGC 2 cut(s) 181, 422
ApoI RAATTY 7 cut(s) 21, 200, 374, 1209, 1269, 1378, 1675
ArsI GACNNNNNNTTYG 2 cut(s) 692, 724
Asp700I GAANNNNTTC 1 cut(s) 904
AspLEI GCGC 3 cut(s) 1037, 1055, 1085
AspS9I GGNCC 1 cut(s) 1627
AsuC2I CCSGG 3 cut(s) 122, 770, 1622
AsuII TTCGAA 1 cut(s) 291
AvaII GGWCC 1 cut(s) 1627
BanI GGYRCC 4 cut(s) 405, 472, 617, 1617
BbsI GAAGAC 1 cut(s) 745
BbvCI CCTCAGC 1 cut(s) 1105
BbvI GCAGC 2 cut(s) 193, 409
BccI CCATC 5 cut(s) 237, 529, 950, 1034, 1642
BceAI ACGGC 1 cut(s) 781
BciT130I CCWGG 1 cut(s) 1375
BciVI GTATCC 2 cut(s) 1007, 1343
BcnI CCSGG 3 cut(s) 122, 770, 1622
BcoDI GTCTC 1 cut(s) 328
BfaI CTAG 6 cut(s) 9, 194, 252, 1148, 1335, 1520
BfmI CTRYAG 6 cut(s) 165, 427, 684, 1158, 1411, 1707
BfuI GTATCC 2 cut(s) 1007, 1343
BglII AGATCT 2 cut(s) 438, 1468
BisI GCNGC 2 cut(s) 182, 423
BlsI GCNGC 2 cut(s) 183, 424
Bme1390I CCNGG 4 cut(s) 122, 770, 1375, 1622
Bme18I GGWCC 1 cut(s) 1627
BmgBI CACGTC 1 cut(s) 133
BmgT120I GGNCC 1 cut(s) 1627
BmiI GGNNCC 4 cut(s) 407, 474, 619, 1619
BmrFI CCNGG 4 cut(s) 122, 770, 1375, 1622
BmsI GCATC 5 cut(s) 86, 246, 1187, 1555, 1617
BpiI GAAGAC 1 cut(s) 745
BpmI CTGGAG 1 cut(s) 1357
Bpu10I CCTNAGC 1 cut(s) 1105
Bpu14I TTCGAA 1 cut(s) 291
BpuEI CTTGAG 2 cut(s) 818, 1454
BpuMI CCSGG 3 cut(s) 122, 770, 1622
Bsa29I ATCGAT 1 cut(s) 219
BsaJI CCNNGG 3 cut(s) 120, 1192, 1302
BsaWI WCCGGW 3 cut(s) 402, 1360, 1478
BsaXI ACNNNNNCTCC 4 cut(s) 1197, 1227, 1521, 1551
Bsc4I CCNNNNNNNGG 3 cut(s) 527, 1552, 1660
Bse1I ACTGG 1 cut(s) 710
Bse3DI GCAATG 2 cut(s) 619, 1353
BseBI CCWGG 1 cut(s) 1375
BseCI ATCGAT 1 cut(s) 219
BseDI CCNNGG 3 cut(s) 120, 1192, 1302
BseGI GGATG 4 cut(s) 961, 1202, 1608, 1634
BseLI CCNNNNNNNGG 3 cut(s) 527, 1552, 1660
BseMI GCAATG 2 cut(s) 619, 1353
BseMII CTCAG 5 cut(s) 30, 160, 339, 432, 1119
BseNI ACTGG 1 cut(s) 710
BseRI GAGGAG 2 cut(s) 1542, 1568
BseX3I CGGCCG 1 cut(s) 766
BseXI GCAGC 2 cut(s) 193, 409
BsgI GTGCAG 2 cut(s) 76, 1485
Bsh1236I CGCG 1 cut(s) 1053
Bsh1285I CGRYCG 1 cut(s) 769
BshFI GGCC 2 cut(s) 144, 768
BshNI GGYRCC 4 cut(s) 405, 472, 617, 1617
BshVI ATCGAT 1 cut(s) 219
BsiEI CGRYCG 1 cut(s) 769
BsiSI CCGG 6 cut(s) 122, 403, 769, 1361, 1479, 1622
BslFI GGGAC 2 cut(s) 119, 1354
BslI CCNNNNNNNGG 3 cut(s) 527, 1552, 1660
BsmAI GTCTC 1 cut(s) 328
BsmBI CGTCTC 1 cut(s) 328
BsmFI GGGAC 2 cut(s) 119, 1354
BsmI GAATGC 1 cut(s) 56
BsnI GGCC 2 cut(s) 144, 768
Bsp119I TTCGAA 1 cut(s) 291
Bsp1407I TGTACA 2 cut(s) 491, 569
Bsp143I GATC 6 cut(s) 438, 894, 1201, 1306, 1468, 1711
BspACI CCGC 1 cut(s) 857
BspANI GGCC 2 cut(s) 144, 768
BspCNI CTCAG 5 cut(s) 29, 159, 338, 431, 1118
BspDI ATCGAT 1 cut(s) 219
BspFNI CGCG 1 cut(s) 1053
BspHI TCATGA 1 cut(s) 154
BspLI GGNNCC 4 cut(s) 407, 474, 619, 1619
BspPI GGATC 1 cut(s) 1314
BspT104I TTCGAA 1 cut(s) 291
BspT107I GGYRCC 4 cut(s) 405, 472, 617, 1617
BsrDI GCAATG 2 cut(s) 619, 1353
BsrGI TGTACA 2 cut(s) 491, 569
BsrI ACTGG 1 cut(s) 710
BssECI CCNNGG 3 cut(s) 120, 1192, 1302
BssMI GATC 6 cut(s) 438, 894, 1201, 1306, 1468, 1711
BssT1I CCWWGG 2 cut(s) 1192, 1302
Bst2UI CCWGG 1 cut(s) 1375
Bst4CI ACNGT 6 cut(s) 169, 455, 477, 486, 530, 1631
Bst6I CTCTTC 2 cut(s) 957, 1663
BstAUI TGTACA 2 cut(s) 491, 569
BstBI TTCGAA 1 cut(s) 291
BstC8I GCNNGC 2 cut(s) 91, 535
BstDEI CTNAG 7 cut(s) 16, 146, 325, 340, 410, 418, 1105
BstF5I GGATG 4 cut(s) 961, 1202, 1608, 1634
BstFNI CGCG 1 cut(s) 1053
BstHHI GCGC 3 cut(s) 1037, 1055, 1085
BstKTI GATC 6 cut(s) 441, 897, 1204, 1309, 1471, 1714
BstMAI GTCTC 1 cut(s) 328
BstMBI GATC 6 cut(s) 438, 894, 1201, 1306, 1468, 1711
BstMCI CGRYCG 1 cut(s) 769
BstMWI GCNNNNNNNGC 2 cut(s) 1026, 1574
BstNI CCWGG 1 cut(s) 1375
BstSCI CCNGG 4 cut(s) 120, 768, 1373, 1620
BstSFI CTRYAG 6 cut(s) 165, 427, 684, 1158, 1411, 1707
BstUI CGCG 1 cut(s) 1053
BstV1I GCAGC 2 cut(s) 193, 409
BstV2I GAAGAC 1 cut(s) 745
BstX2I RGATCY 2 cut(s) 438, 1468
BstYI RGATCY 2 cut(s) 438, 1468
BstZI CGGCCG 1 cut(s) 766
Bsu15I ATCGAT 1 cut(s) 219
BsuI GTATCC 2 cut(s) 1007, 1343
BsuRI GGCC 2 cut(s) 144, 768
BsuTUI ATCGAT 1 cut(s) 219
BtrI CACGTC 1 cut(s) 133
BtsCI GGATG 4 cut(s) 961, 1202, 1608, 1634
Cac8I GCNNGC 2 cut(s) 91, 535
CciI TCATGA 1 cut(s) 154
CfoI GCGC 3 cut(s) 1037, 1055, 1085
Cfr13I GGNCC 1 cut(s) 1627
ClaI ATCGAT 1 cut(s) 219
CseI GACGC 1 cut(s) 1059
Csp6I GTAC 8 cut(s) 12, 191, 245, 319, 492, 570, 639, 1063
CviAII CATG 8 cut(s) 52, 103, 155, 390, 467, 1004, 1091, 1639
CviQI GTAC 8 cut(s) 12, 191, 245, 319, 492, 570, 639, 1063
DdeI CTNAG 7 cut(s) 16, 146, 325, 340, 410, 418, 1105
DpnI GATC 6 cut(s) 440, 896, 1203, 1308, 1470, 1713
DpnII GATC 6 cut(s) 438, 894, 1201, 1306, 1468, 1711
DraIII CACNNNGTG 1 cut(s) 1624
EaeI YGGCCR 1 cut(s) 766
EagI CGGCCG 1 cut(s) 766
Eam1104I CTCTTC 2 cut(s) 957, 1663
EarI CTCTTC 2 cut(s) 957, 1663
EclXI CGGCCG 1 cut(s) 766
Eco130I CCWWGG 2 cut(s) 1192, 1302
Eco32I GATATC 2 cut(s) 152, 775
Eco47I GGWCC 1 cut(s) 1627
Eco52I CGGCCG 1 cut(s) 766
EcoRI GAATTC 1 cut(s) 1209
EcoRII CCWGG 1 cut(s) 1373
EcoRV GATATC 2 cut(s) 152, 775
EcoT14I CCWWGG 2 cut(s) 1192, 1302
ErhI CCWWGG 2 cut(s) 1192, 1302
Esp3I CGTCTC 1 cut(s) 328
FaeI CATG 8 cut(s) 55, 106, 158, 393, 470, 1007, 1094, 1642
FalI AAGNNNNNCTT 2 cut(s) 1109, 1141
FaqI GGGAC 2 cut(s) 119, 1354
FatI CATG 8 cut(s) 51, 102, 154, 389, 466, 1003, 1090, 1638
FblI GTMKAC 3 cut(s) 164, 267, 762
Fnu4HI GCNGC 2 cut(s) 182, 423
FokI GGATG 4 cut(s) 968, 1209, 1595, 1621
Fsp4HI GCNGC 2 cut(s) 182, 423
FspBI CTAG 6 cut(s) 9, 194, 252, 1148, 1335, 1520
GlaI GCGC 3 cut(s) 1036, 1054, 1084
GluI GCNGC 2 cut(s) 182, 423
GsuI CTGGAG 1 cut(s) 1357
HaeIII GGCC 2 cut(s) 144, 768
HapII CCGG 6 cut(s) 122, 403, 769, 1361, 1479, 1622
HgaI GACGC 1 cut(s) 1059
HhaI GCGC 3 cut(s) 1037, 1055, 1085
Hin1II CATG 8 cut(s) 55, 106, 158, 393, 470, 1007, 1094, 1642
Hin6I GCGC 3 cut(s) 1035, 1053, 1083
HinP1I GCGC 3 cut(s) 1035, 1053, 1083
HincII GTYRAC 2 cut(s) 268, 558
HindII GTYRAC 2 cut(s) 268, 558
HinfI GANTC 6 cut(s) 98, 603, 727, 1261, 1475, 1542
HpaII CCGG 6 cut(s) 122, 403, 769, 1361, 1479, 1622
Hpy166II GTNNAC 9 cut(s) 165, 191, 247, 268, 558, 763, 1063, 1492, 1627
Hpy188III TCNNGA 7 cut(s) 155, 173, 724, 1148, 1384, 1472, 1520
Hpy8I GTNNAC 9 cut(s) 165, 191, 247, 268, 558, 763, 1063, 1492, 1627
HpyAV CCTTC 4 cut(s) 319, 1517, 1553, 1658
HpyCH4III ACNGT 6 cut(s) 169, 455, 477, 486, 530, 1631
HpyCH4IV ACGT 4 cut(s) 132, 321, 361, 1488
HpyCH4V TGCA 7 cut(s) 93, 533, 1358, 1466, 1577, 1589, 1608
HpyF10VI GCNNNNNNNGC 2 cut(s) 1026, 1574
HpyF3I CTNAG 7 cut(s) 16, 146, 325, 340, 410, 418, 1105
HpySE526I ACGT 4 cut(s) 132, 321, 361, 1488
Hsp92II CATG 8 cut(s) 55, 106, 158, 393, 470, 1007, 1094, 1642
HspAI GCGC 3 cut(s) 1035, 1053, 1083
Kzo9I GATC 6 cut(s) 438, 894, 1201, 1306, 1468, 1711
LmnI GCTCC 1 cut(s) 74
Lsp1109I GCAGC 2 cut(s) 193, 409
LweI GCATC 5 cut(s) 86, 246, 1187, 1555, 1617
MaeI CTAG 6 cut(s) 9, 194, 252, 1148, 1335, 1520
MaeII ACGT 4 cut(s) 132, 321, 361, 1488
MaeIII GTNAC 4 cut(s) 357, 413, 732, 795
MalI GATC 6 cut(s) 440, 896, 1203, 1308, 1470, 1713
MboI GATC 6 cut(s) 438, 894, 1201, 1306, 1468, 1711
MboII GAAGA 6 cut(s) 745, 900, 974, 1508, 1544, 1680
MfeI CAATTG 1 cut(s) 1344
MflI RGATCY 2 cut(s) 438, 1468
MlyI GAGTC 3 cut(s) 1255, 1469, 1551
MmeI TCCRAC 2 cut(s) 1115, 1641
MroXI GAANNNNTTC 1 cut(s) 904
MseI TTAA 3 cut(s) 435, 864, 939
MslI CAYNNNNRTG 1 cut(s) 1008
MspA1I CMGCKG 1 cut(s) 422
MspI CCGG 6 cut(s) 122, 403, 769, 1361, 1479, 1622
MspR9I CCNGG 4 cut(s) 122, 770, 1375, 1622
MunI CAATTG 1 cut(s) 1344
Mva1269I GAATGC 1 cut(s) 56
MvaI CCWGG 1 cut(s) 1375
MvnI CGCG 1 cut(s) 1053
MwoI GCNNNNNNNGC 2 cut(s) 1026, 1574
NciI CCSGG 3 cut(s) 122, 770, 1622
NdeII GATC 6 cut(s) 438, 894, 1201, 1306, 1468, 1711
NlaIII CATG 8 cut(s) 55, 106, 158, 393, 470, 1007, 1094, 1642
NlaIV GGNNCC 4 cut(s) 407, 474, 619, 1619
NmuCI GTSAC 1 cut(s) 413
NspV TTCGAA 1 cut(s) 291
PagI TCATGA 1 cut(s) 154
PctI GAATGC 1 cut(s) 56
PdmI GAANNNNTTC 1 cut(s) 904
PfeI GAWTC 3 cut(s) 98, 603, 727
PflMI CCANNNNNTGG 1 cut(s) 1660
PfoI TCCNGGA 1 cut(s) 1373
PkrI GCNGC 2 cut(s) 183, 424
PleI GAGTC 3 cut(s) 1255, 1469, 1550
PpsI GAGTC 3 cut(s) 1255, 1469, 1550
PsiI TTATAA 1 cut(s) 1398
Psp6I CCWGG 1 cut(s) 1373
PspGI CCWGG 1 cut(s) 1373
PspN4I GGNNCC 4 cut(s) 407, 474, 619, 1619
PspPI GGNCC 1 cut(s) 1627
PsuI RGATCY 2 cut(s) 438, 1468
PvuII CAGCTG 1 cut(s) 422
RsaI GTAC 8 cut(s) 13, 192, 246, 320, 493, 571, 640, 1064
RsaNI GTAC 8 cut(s) 12, 191, 245, 319, 492, 570, 639, 1063
RseI CAYNNNNRTG 1 cut(s) 1008
SalI GTCGAC 1 cut(s) 266
SaqAI TTAA 3 cut(s) 435, 864, 939
SatI GCNGC 2 cut(s) 182, 423
Sau3AI GATC 6 cut(s) 438, 894, 1201, 1306, 1468, 1711
Sau96I GGNCC 1 cut(s) 1627
SchI GAGTC 3 cut(s) 1255, 1469, 1551
ScrFI CCNGG 4 cut(s) 122, 770, 1375, 1622
SfaNI GCATC 5 cut(s) 86, 246, 1187, 1555, 1617
SfcI CTRYAG 6 cut(s) 165, 427, 684, 1158, 1411, 1707
SfuI TTCGAA 1 cut(s) 291
SinI GGWCC 1 cut(s) 1627
SmiMI CAYNNNNRTG 1 cut(s) 1008
SmlI CTYRAG 2 cut(s) 833, 1433
SmoI CTYRAG 2 cut(s) 833, 1433
SsiI CCGC 1 cut(s) 857
SspMI CTAG 6 cut(s) 9, 194, 252, 1148, 1335, 1520
StyD4I CCNGG 4 cut(s) 120, 768, 1373, 1620
StyI CCWWGG 2 cut(s) 1192, 1302
TaaI ACNGT 6 cut(s) 169, 455, 477, 486, 530, 1631
TaiI ACGT 4 cut(s) 135, 324, 364, 1491
TaqI TCGA 6 cut(s) 219, 240, 267, 291, 678, 1221
TaqII GACCGA 1 cut(s) 739
TatI WGTACW 5 cut(s) 190, 244, 491, 569, 638
TfiI GAWTC 3 cut(s) 98, 603, 727
Tru1I TTAA 3 cut(s) 435, 864, 939
Tru9I TTAA 3 cut(s) 435, 864, 939
TseFI GTSAC 1 cut(s) 413
TseI GCWGC 2 cut(s) 181, 422
Tsp45I GTSAC 1 cut(s) 413
TspDTI ATGAA 6 cut(s) 347, 469, 958, 990, 1107, 1655
Van91I CCANNNNNTGG 1 cut(s) 1660
VpaK11BI GGWCC 1 cut(s) 1627
XapI RAATTY 7 cut(s) 21, 200, 374, 1209, 1269, 1378, 1675
XbaI TCTAGA 2 cut(s) 1147, 1519
XmiI GTMKAC 3 cut(s) 164, 267, 762
XmnI GAANNNNTTC 1 cut(s) 904
XspI CTAG 6 cut(s) 9, 194, 252, 1148, 1335, 1520
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.