RLG00000029554

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0000107
Physical Location & Seq
Reverse (-)
40252671 .. 40254800
2130 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029554

Sequence Viewer

Length: 1620 bp
ATGTGTGGGGAATATGGCCCAGCTATCAGATTCCCTTTTAGCCTCAAAGGTAGCCACCCAGAAAATTGTGGGTATCCTGGGTTTCTTGTATCCTGCAATCAAAAGAATGAAACCATTCTTGAGCTGCCAATCCCGGTCAAATTCGCAATCAAAACCATAGACTATGAGACTCAGTATATCCAGCTATACGACCCAGAAAATTGCTTGCTGGCGAAGCTATTGAAAATCCACAACATGTCAATCTCTCCCTTCTACTACCCAGAATACCAAATGCATAATATTACCTTATTCAATTGTTCTTCAGCTGAAATGGAATCGATGTACAATCCAGTCCCCTGCTTGAGTGGCCCTGGCTACCAAATTTATTCGCTTTATTCAGGGGGTTTAATCGACGACACTCCCCTTCTGTCTTGTACAAAGATGCGTAATCTTTCATTGTTTCCATACAAGCTGTATTCACCTTCAAATCTTTATTTGGAATGGTCTGAACCAAATTGTAAACCATGTGAAGCACATGGCAAGATATGTGGATCGAAGAACAATGGCACCACAATTTATCGTGTCTACAGTTCTGACAGGAAAGAAAAAGAGAATCAATTAAAACTTGAAGTATTTTTAGAGGATTACAGAGCACTCAAACCAAGCAGATATTCTTATGCCGATATTAAGAGGATTACAAATCAATTCAAGGAAAAATTAGGCCAAGGAGCCTATGGGACTGTTTTTAAGGGAAAACTTTCTGCTGAATGTTTTGTTGCGGTGAAAGTCCTCAATAGTACTAAGGGGAATGGGGAAGACTTTGTAAATGAAGTAGGAACAATGGGACATATCCACCATGTCAATGTGGTTCGATTGGTTGGATTCTGCGCAGATGGATTTAGACGAGCTCTTGTTTATGATTTCTTACCTAATGGTTCACTACAAGATTTCATTTCATCAGCAGACAATAACAATTCTTTACTTGGTTGGAGTAAGTTGCAAGATATTTCTCTTGGAATAGCAAAAGGAATTGAATATCTGCACGAAGGATGCAATCAACGGATCCTACATTTTGATATCAAGCCCCATAATGTCTTGCTAGACCATAACTTCGATGCAAAGATTTCTGATTTTGGTTTGGCCAAGTTATGTTCCAAGGATCAAAGTATAGTGTCAATGACTACCGCCAGGGGAACTATCGGGTACATTGCACCTGAAGTGTTGTCCAGGAACTTCGGAAATGTGTCCTATAAGTCAGATGTCTATAGCTATGGAATGGTACTGCTTGAGATTGTAGGAGGGAGAAAGAACATTGGTTCAACCATAGAGAACACCAATGAAGTTTACTACCCAGAATGGATCTATAATCTTCTAGAAGAAAAAGACGACCTACCTATCAATGTAGGGGAAGAAGGAGATGCTAAAATTGCAAAGAGACTTGCGATTGTAGGTCTCTGGTGCATTCAATGGCACCCTGCAGATCGTCCTTCTATGCAAGGGGTTGTTCGGATGTTGGAAGAAGGAGAAAACTTAACCATGCCTCCAAATCCTTTTGCCTCTCAGGGTCCAGCAGGAACAGATACAAGTACACCTTCAAGAAATTTAAATCTCCAACTAGAAGTAATTCCTGAGTTAGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase

Protein Analysis

540

Amino Acids

60.51

Weight (kDa)

5.73

Isoelectric Point (pI)

34.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 2 - 64 1.3e-15 Wall-associated receptor kinase galacturonan-binding
PK_Tyr_Ser-Thr PF07714 228 - 498 2.1e-45 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 229 - 495 2.5e-46 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 868
AccB1I GGYRCC 2 cut(s) 545, 1449
AccI GTMKAC 1 cut(s) 564
AciI CCGC 2 cut(s) 758, 1164
AclWI GGATC 5 cut(s) 538, 1036, 1049, 1146, 1346
AcoI YGGCCR 1 cut(s) 1119
AcsI RAATTY 3 cut(s) 140, 360, 1579
AcuI CTGAAG 2 cut(s) 285, 1215
AfaI GTAC 6 cut(s) 323, 415, 778, 1184, 1260, 1567
AflIII ACRYGT 1 cut(s) 234
AgsI TTSAA 9 cut(s) 223, 292, 465, 608, 688, 1013, 1299, 1445, 1575
AjnI CCWGG 4 cut(s) 76, 349, 1166, 1205
AjuI GAANNNNNNNTTGG 2 cut(s) 634, 666
AluBI AGCT 8 cut(s) 23, 124, 184, 217, 305, 451, 887, 1248
AluI AGCT 8 cut(s) 23, 124, 184, 217, 305, 451, 887, 1248
Alw21I GWGCWC 2 cut(s) 634, 889
Alw26I GTCTC 3 cut(s) 161, 1408, 1436
AlwI GGATC 5 cut(s) 538, 1036, 1049, 1146, 1346
AoxI GGCC 4 cut(s) 16, 346, 700, 1119
ApeKI GCWGC 1 cut(s) 124
ApoI RAATTY 3 cut(s) 140, 360, 1579
ArsI GACNNNNNNTTYG 2 cut(s) 1073, 1105
Asp700I GAANNNNTTC 3 cut(s) 114, 736, 1602
AspLEI GCGC 1 cut(s) 869
AspS9I GGNCC 3 cut(s) 17, 347, 1544
AsuC2I CCSGG 1 cut(s) 134
AsuHPI GGTGA 2 cut(s) 450, 772
AvaII GGWCC 1 cut(s) 1544
BalI TGGCCA 1 cut(s) 1121
BamHI GGATCC 1 cut(s) 1041
BanI GGYRCC 2 cut(s) 545, 1449
BanII GRGCYC 1 cut(s) 889
BbsI GAAGAC 1 cut(s) 801
Bbv12I GWGCWC 2 cut(s) 634, 889
BbvI GCAGC 1 cut(s) 111
BccI CCATC 1 cut(s) 866
BciT130I CCWGG 4 cut(s) 78, 351, 1168, 1207
BciVI GTATCC 2 cut(s) 84, 100
BcnI CCSGG 1 cut(s) 134
BcoDI GTCTC 3 cut(s) 161, 1408, 1436
BfaI CTAG 3 cut(s) 1079, 1352, 1595
BfmI CTRYAG 3 cut(s) 565, 1243, 1455
BfuI GTATCC 2 cut(s) 84, 100
BisI GCNGC 1 cut(s) 125
BlsI GCNGC 1 cut(s) 126
BmcAI AGTACT 1 cut(s) 778
Bme1390I CCNGG 5 cut(s) 78, 134, 351, 1168, 1207
Bme18I GGWCC 1 cut(s) 1544
BmgT120I GGNCC 3 cut(s) 17, 347, 1544
BmiI GGNNCC 5 cut(s) 547, 709, 1043, 1451, 1545
BmrFI CCNGG 5 cut(s) 78, 134, 351, 1168, 1207
BmsI GCATC 4 cut(s) 411, 1019, 1084, 1387
BpiI GAAGAC 1 cut(s) 801
BpuEI CTTGAG 3 cut(s) 140, 361, 1286
BpuMI CCSGG 1 cut(s) 134
Bsa29I ATCGAT 1 cut(s) 317
BsaI GGTCTC 1 cut(s) 1436
BsaJI CCNNGG 5 cut(s) 77, 349, 703, 1134, 1167
BsaXI ACNNNNNCTCC 2 cut(s) 1504, 1534
Bse1I ACTGG 1 cut(s) 329
Bse3DI GCAATG 1 cut(s) 1185
BseBI CCWGG 4 cut(s) 78, 351, 1168, 1207
BseCI ATCGAT 1 cut(s) 317
BseDI CCNNGG 5 cut(s) 77, 349, 703, 1134, 1167
BseGI GGATG 2 cut(s) 1034, 1494
BseMI GCAATG 1 cut(s) 1185
BseMII CTCAG 3 cut(s) 185, 1553, 1599
BseNI ACTGG 1 cut(s) 329
BseXI GCAGC 1 cut(s) 111
BseYI CCCAGC 1 cut(s) 19
BsgI GTGCAG 1 cut(s) 1004
BshFI GGCC 4 cut(s) 18, 348, 702, 1121
BshNI GGYRCC 2 cut(s) 545, 1449
BshVI ATCGAT 1 cut(s) 317
BsiHKAI GWGCWC 2 cut(s) 634, 889
BsiSI CCGG 1 cut(s) 134
BslFI GGGAC 3 cut(s) 317, 730, 837
BsmAI GTCTC 3 cut(s) 161, 1408, 1436
BsmFI GGGAC 3 cut(s) 317, 730, 837
BsmI GAATGC 1 cut(s) 1440
BsnI GGCC 4 cut(s) 18, 348, 702, 1121
Bso31I GGTCTC 1 cut(s) 1436
Bsp1286I GDGCHC 2 cut(s) 634, 889
Bsp1407I TGTACA 2 cut(s) 321, 413
Bsp143I GATC 5 cut(s) 530, 1041, 1138, 1338, 1459
BspACI CCGC 2 cut(s) 758, 1164
BspANI GGCC 4 cut(s) 18, 348, 702, 1121
BspCNI CTCAG 3 cut(s) 184, 1552, 1600
BspDI ATCGAT 1 cut(s) 317
BspLI GGNNCC 5 cut(s) 547, 709, 1043, 1451, 1545
BspMAI CTGCAG 1 cut(s) 1459
BspPI GGATC 5 cut(s) 538, 1036, 1049, 1146, 1346
BspT107I GGYRCC 2 cut(s) 545, 1449
BspTNI GGTCTC 1 cut(s) 1436
BsrDI GCAATG 1 cut(s) 1185
BsrGI TGTACA 2 cut(s) 321, 413
BsrI ACTGG 1 cut(s) 329
BssECI CCNNGG 5 cut(s) 77, 349, 703, 1134, 1167
BssMI GATC 5 cut(s) 530, 1041, 1138, 1338, 1459
BssT1I CCWWGG 2 cut(s) 703, 1134
Bst2UI CCWGG 4 cut(s) 78, 351, 1168, 1207
Bst4CI ACNGT 2 cut(s) 569, 721
BstAUI TGTACA 2 cut(s) 321, 413
BstC8I GCNNGC 2 cut(s) 206, 210
BstDEI CTNAG 4 cut(s) 171, 780, 1539, 1608
BstF5I GGATG 2 cut(s) 1034, 1494
BstHHI GCGC 1 cut(s) 869
BstKTI GATC 5 cut(s) 533, 1044, 1141, 1341, 1462
BstMAI GTCTC 3 cut(s) 161, 1408, 1436
BstMBI GATC 5 cut(s) 530, 1041, 1138, 1338, 1459
BstMWI GCNNNNNNNGC 3 cut(s) 214, 345, 1406
BstNI CCWGG 4 cut(s) 78, 351, 1168, 1207
BstNSI RCATGY 1 cut(s) 238
BstSCI CCNGG 5 cut(s) 76, 132, 349, 1166, 1205
BstSFI CTRYAG 3 cut(s) 565, 1243, 1455
BstV1I GCAGC 1 cut(s) 111
BstV2I GAAGAC 1 cut(s) 801
BstX2I RGATCY 2 cut(s) 1041, 1338
BstYI RGATCY 2 cut(s) 1041, 1338
Bsu15I ATCGAT 1 cut(s) 317
BsuI GTATCC 2 cut(s) 84, 100
BsuRI GGCC 4 cut(s) 18, 348, 702, 1121
BsuTUI ATCGAT 1 cut(s) 317
BtsCI GGATG 2 cut(s) 1034, 1494
Cac8I GCNNGC 2 cut(s) 206, 210
CfoI GCGC 1 cut(s) 869
Cfr13I GGNCC 3 cut(s) 17, 347, 1544
ClaI ATCGAT 1 cut(s) 317
Csp6I GTAC 6 cut(s) 322, 414, 777, 1183, 1259, 1566
CspCI CAANNNNNGTGG 2 cut(s) 508, 543
CviAII CATG 5 cut(s) 235, 504, 515, 836, 1516
CviQI GTAC 6 cut(s) 322, 414, 777, 1183, 1259, 1566
DdeI CTNAG 4 cut(s) 171, 780, 1539, 1608
DpnI GATC 5 cut(s) 532, 1043, 1140, 1340, 1461
DpnII GATC 5 cut(s) 530, 1041, 1138, 1338, 1459
DraI TTTAAA 1 cut(s) 1584
EaeI YGGCCR 1 cut(s) 1119
Ecl136II GAGCTC 1 cut(s) 887
Eco130I CCWWGG 2 cut(s) 703, 1134
Eco24I GRGCYC 1 cut(s) 889
Eco31I GGTCTC 1 cut(s) 1436
Eco32I GATATC 1 cut(s) 1057
Eco47I GGWCC 1 cut(s) 1544
Eco53kI GAGCTC 1 cut(s) 887
Eco57I CTGAAG 2 cut(s) 285, 1215
EcoICRI GAGCTC 1 cut(s) 887
EcoRII CCWGG 4 cut(s) 76, 349, 1166, 1205
EcoRV GATATC 1 cut(s) 1057
EcoT14I CCWWGG 2 cut(s) 703, 1134
EcoT22I ATGCAT 1 cut(s) 276
EcoT38I GRGCYC 1 cut(s) 889
ErhI CCWWGG 2 cut(s) 703, 1134
FaeI CATG 5 cut(s) 238, 507, 518, 839, 1519
FalI AAGNNNNNCTT 2 cut(s) 1555, 1587
FaqI GGGAC 3 cut(s) 317, 730, 837
FatI CATG 5 cut(s) 234, 503, 514, 835, 1515
FblI GTMKAC 1 cut(s) 564
Fnu4HI GCNGC 1 cut(s) 125
FokI GGATG 2 cut(s) 1041, 1501
FriOI GRGCYC 1 cut(s) 889
Fsp4HI GCNGC 1 cut(s) 125
FspBI CTAG 3 cut(s) 1079, 1352, 1595
FspI TGCGCA 1 cut(s) 868
GlaI GCGC 1 cut(s) 868
GluI GCNGC 1 cut(s) 125
GsaI CCCAGC 1 cut(s) 23
HaeIII GGCC 4 cut(s) 18, 348, 702, 1121
HapII CCGG 1 cut(s) 134
HhaI GCGC 1 cut(s) 869
Hin1II CATG 5 cut(s) 238, 507, 518, 839, 1519
Hin6I GCGC 1 cut(s) 867
HinP1I GCGC 1 cut(s) 867
HinfI GANTC 5 cut(s) 30, 169, 314, 592, 861
HpaII CCGG 1 cut(s) 134
HphI GGTGA 2 cut(s) 450, 772
Hpy166II GTNNAC 5 cut(s) 500, 565, 917, 1324, 1568
Hpy188I TCNGA 7 cut(s) 29, 487, 574, 1108, 1217, 1237, 1488
Hpy188III TCNNGA 4 cut(s) 119, 1352, 1575, 1607
Hpy8I GTNNAC 5 cut(s) 500, 565, 917, 1324, 1568
Hpy99I CGWCG 1 cut(s) 395
HpyAV CCTTC 8 cut(s) 259, 413, 471, 1019, 1385, 1476, 1493, 1581
HpyCH4III ACNGT 2 cut(s) 569, 721
HpyF10VI GCNNNNNNNGC 3 cut(s) 214, 345, 1406
HpyF3I CTNAG 4 cut(s) 171, 780, 1539, 1608
Hsp92II CATG 5 cut(s) 238, 507, 518, 839, 1519
HspAI GCGC 1 cut(s) 867
Kzo9I GATC 5 cut(s) 530, 1041, 1138, 1338, 1459
LmnI GCTCC 1 cut(s) 707
Lsp1109I GCAGC 1 cut(s) 111
LweI GCATC 4 cut(s) 411, 1019, 1084, 1387
MaeI CTAG 3 cut(s) 1079, 1352, 1595
MalI GATC 5 cut(s) 532, 1043, 1140, 1340, 1461
MboI GATC 5 cut(s) 530, 1041, 1138, 1338, 1459
MboII GAAGA 7 cut(s) 291, 547, 806, 1340, 1367, 1400, 1508
MfeI CAATTG 1 cut(s) 292
MflI RGATCY 2 cut(s) 1041, 1338
MhlI GDGCHC 2 cut(s) 634, 889
MlsI TGGCCA 1 cut(s) 1121
MluNI TGGCCA 1 cut(s) 1121
MlyI GAGTC 1 cut(s) 163
MmeI TCCRAC 4 cut(s) 838, 947, 1473, 1615
MnlI CCTC 7 cut(s) 53, 613, 663, 779, 1271, 1530, 1546
Mox20I TGGCCA 1 cut(s) 1121
Mph1103I ATGCAT 1 cut(s) 276
MroXI GAANNNNTTC 3 cut(s) 114, 736, 1602
MscI TGGCCA 1 cut(s) 1121
MseI TTAA 6 cut(s) 386, 599, 666, 726, 1511, 1583
MslI CAYNNNNRTG 1 cut(s) 840
Msp20I TGGCCA 1 cut(s) 1121
MspA1I CMGCKG 1 cut(s) 305
MspI CCGG 1 cut(s) 134
MspR9I CCNGG 5 cut(s) 78, 134, 351, 1168, 1207
MunI CAATTG 1 cut(s) 292
Mva1269I GAATGC 1 cut(s) 1440
MvaI CCWGG 4 cut(s) 78, 351, 1168, 1207
MwoI GCNNNNNNNGC 3 cut(s) 214, 345, 1406
NciI CCSGG 1 cut(s) 134
NdeII GATC 5 cut(s) 530, 1041, 1138, 1338, 1459
NlaIII CATG 5 cut(s) 238, 507, 518, 839, 1519
NlaIV GGNNCC 5 cut(s) 547, 709, 1043, 1451, 1545
NsbI TGCGCA 1 cut(s) 868
NsiI ATGCAT 1 cut(s) 276
NspI RCATGY 1 cut(s) 238
PciI ACATGT 1 cut(s) 234
PctI GAATGC 1 cut(s) 1440
PdmI GAANNNNTTC 3 cut(s) 114, 736, 1602
PfeI GAWTC 4 cut(s) 30, 314, 592, 861
PfoI TCCNGGA 1 cut(s) 1205
PkrI GCNGC 1 cut(s) 126
PleI GAGTC 1 cut(s) 163
PpsI GAGTC 1 cut(s) 163
PscI ACATGT 1 cut(s) 234
Psp124BI GAGCTC 1 cut(s) 889
Psp6I CCWGG 4 cut(s) 76, 349, 1166, 1205
PspFI CCCAGC 1 cut(s) 19
PspGI CCWGG 4 cut(s) 76, 349, 1166, 1205
PspN4I GGNNCC 5 cut(s) 547, 709, 1043, 1451, 1545
PspPI GGNCC 3 cut(s) 17, 347, 1544
PstI CTGCAG 1 cut(s) 1459
PsuI RGATCY 2 cut(s) 1041, 1338
PvuII CAGCTG 1 cut(s) 305
RsaI GTAC 6 cut(s) 323, 415, 778, 1184, 1260, 1567
RsaNI GTAC 6 cut(s) 322, 414, 777, 1183, 1259, 1566
RseI CAYNNNNRTG 1 cut(s) 840
SacI GAGCTC 1 cut(s) 889
SaqAI TTAA 6 cut(s) 386, 599, 666, 726, 1511, 1583
SatI GCNGC 1 cut(s) 125
Sau3AI GATC 5 cut(s) 530, 1041, 1138, 1338, 1459
Sau96I GGNCC 3 cut(s) 17, 347, 1544
ScaI AGTACT 1 cut(s) 778
SchI GAGTC 1 cut(s) 163
ScrFI CCNGG 5 cut(s) 78, 134, 351, 1168, 1207
SduI GDGCHC 2 cut(s) 634, 889
SfaNI GCATC 4 cut(s) 411, 1019, 1084, 1387
SfcI CTRYAG 3 cut(s) 565, 1243, 1455
SinI GGWCC 1 cut(s) 1544
SmiI ATTTAAAT 1 cut(s) 1584
SmiMI CAYNNNNRTG 1 cut(s) 840
SmlI CTYRAG 3 cut(s) 119, 340, 1265
SmoI CTYRAG 3 cut(s) 119, 340, 1265
SsiI CCGC 2 cut(s) 758, 1164
SspI AATATT 1 cut(s) 280
SspMI CTAG 3 cut(s) 1079, 1352, 1595
SstI GAGCTC 1 cut(s) 889
StyD4I CCNGG 5 cut(s) 76, 132, 349, 1166, 1205
StyI CCWWGG 2 cut(s) 703, 1134
SwaI ATTTAAAT 1 cut(s) 1584
TaaI ACNGT 2 cut(s) 569, 721
TaqI TCGA 5 cut(s) 317, 390, 533, 850, 1092
TatI WGTACW 4 cut(s) 321, 413, 776, 1565
TfiI GAWTC 4 cut(s) 30, 314, 592, 861
Tru1I TTAA 6 cut(s) 386, 599, 666, 726, 1511, 1583
Tru9I TTAA 6 cut(s) 386, 599, 666, 726, 1511, 1583
TseI GCWGC 1 cut(s) 124
TspDTI ATGAA 6 cut(s) 123, 423, 822, 919, 924, 1332
TspGWI ACGGA 1 cut(s) 1054
VpaK11BI GGWCC 1 cut(s) 1544
XapI RAATTY 3 cut(s) 140, 360, 1579
XbaI TCTAGA 1 cut(s) 1351
XceI RCATGY 1 cut(s) 238
XcmI CCANNNNNNNNNTGG 1 cut(s) 710
XmiI GTMKAC 1 cut(s) 564
XmnI GAANNNNTTC 3 cut(s) 114, 736, 1602
XspI CTAG 3 cut(s) 1079, 1352, 1595
ZrmI AGTACT 1 cut(s) 778
Zsp2I ATGCAT 1 cut(s) 276
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.