RchiOBHm_Chr1g0333471

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000107
Physical Location & Seq
Forward (+)
25616281 .. 25618564
2284 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ56227

Sequence Viewer

Length: 1839 bp
ATGCAGCAAACTCTCATCTCTTTCTTTTGCTTCGTCTTCCTGGTTTTCTCATCCAAAGTCCTTTGTGAAAACCAAAACACCTGCAGAGAATTGAAGTGTCGGAAACATGGCCCAGCTATCCGATTCCCTTTTAGCCTCAAAGGTAGCCACCCAGAAAATTGTGGGTATCCTGGGTTTCTTGTTTCCTGCAATGAAAAGCGGGAAACCATTCTTGAGCTGCCAATCCCAGTCAAATTCGCAATAAAAACCATAGACTATGAGAATCAGTATATCCAGCTATATGACCCAGAAAATTGCTTGCTGGTGAAGCTATTGAAAGTCTACAACATGCCAATCTCTCCCTTCAACTACTCAGAATACCAGATGACTAACATTACTTTATTCAATTGTTCTTCAGCTGAAAGGCAACTGGCGAACAATAAAGTCCCCTGTTTTGAAGGCCCTGCTGGCTACCAAATTTATTCGCTTGATTCGGAGGAGGAGGAGGAGGAGGACACCAGTCTCATTCCCCTTCTGTCTTGCACAAAGATGTATGATTATTCATCAGTTCCATACAGCTCGTATAAGCCTGCAAATCTTCATGTGGAATGGTCAGAACCAAGTTGTAAACGATGCGAAGCACAGGGCAACAAATGTGGACTGAAGAAAAATGGCACCGAAAGTACTGAAATTGAATGCCTTTATAGGAAAGGAGGTTCACAAAAAAAGTTATTAGTAGCAACAGGTGCATCCCTGGGTTCATTTGTACTCGTACTACTTGTCGCTGCAGTTTATCATGTCTACAGTTCTGACAGGAAAGAAAAAGAGAATCAATTAAAGATTGAAGTATTTTTAGAGGATTACAGAGCACTCAAACCAAGCAGGTATTCTTATGCAGATATTAAGAGGATTACAAATCAATTCAAGGAAAAATTAGGCCAAGGAGCCTATGGGACTGTTTTTAAGGGAGAACTTTCTGCTGAATGTTTTGTTGCGGTGAAAGTCCTCAATAGTACTAAGGGGAATGGGGAAGAGTTTGTAAATGAAGTAGGAACAATGGGACATATCCACCATGTCAATGTGGTTCGATTGGTTGGATTCTGTGCGGATGGATTTAGACGAGCTCTTGTTTATGACTTCTTACCTAATGGTTCACTACAAGATTTCTTATCATCAGCAGGCAATAACAATTCTTTCCTGGGTTGGGGTAAGTTGCAAGATATTTCTCTTGGAATAGCAAAAGGAATTGAATATCTGCACCAAGGATGCAATCAACAGATCCTACATTTTGATATCAAACCCCATAATGTTTTGCTAGACCATAACTTCAACCCAAAGATTTCTGATTTTGGTTTGGCCAAGTTATGTTCCAAGGATCAAAGTATAGTGTCAATGACTACCGCCAGGGGAACGATGGGGTACATTGCACCTGAAGTGTTCTCCAGGAACTTTGGAAATGTGTCCTATAAGTCAGATGTCTATAGCTATGGAATGGTACTGCTTGAGATTGTAGGAGGGAGAAGGAACTTTGGTTCAACCACAGAGAACACCAATGAAGTTTACTACCCAGAATGGATCTATAATCTTCTTGAAGAAAAAGTTGACCTACCTATCAATGTAAGGGAAGAAGGAGATGCTAAAATTGCAAAGAGACTTGCAATTGTAGGTCTTTGGTGCATTCAATGGCACCCTGCAGATCGTCCTTCTATGCAAAGGGTGGTTCAGATGTTGGAAGGAGGAGAAAACTTAACCATGCCTCAAAATCCTTTTGCCTCTCAGGGTCCAGCAGGAACAAATACAAGTGCACCTTCAAGAAATTTAAATCTCCAACTAGAAGTAATTCCTGAGTTAGAACAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase

Protein Analysis

612

Amino Acids

68.88

Weight (kDa)

6.13

Isoelectric Point (pI)

38.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 28 - 95 5.7e-16 Wall-associated receptor kinase galacturonan-binding
PK_Tyr_Ser-Thr PF07714 300 - 570 8.5e-45 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 301 - 568 4.2e-47 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 89
Acc36I ACCTGC 2 cut(s) 89, 852
AccB1I GGYRCC 2 cut(s) 653, 1665
AccI GTMKAC 2 cut(s) 321, 780
AciI CCGC 4 cut(s) 199, 974, 1085, 1380
AclWI GGATC 3 cut(s) 1252, 1362, 1562
AcoI YGGCCR 1 cut(s) 1335
AcsI RAATTY 3 cut(s) 233, 456, 1795
AcuI CTGAAG 3 cut(s) 378, 662, 1431
AfaI GTAC 6 cut(s) 664, 747, 753, 994, 1400, 1476
AfiI CCNNNNNNNGG 1 cut(s) 1183
AjnI CCWGG 6 cut(s) 39, 169, 732, 1176, 1382, 1421
AjuI GAANNNNNNNTTGG 2 cut(s) 850, 882
AloI GAACNNNNNNTCC 4 cut(s) 679, 711, 1495, 1527
AluBI AGCT 8 cut(s) 116, 217, 277, 310, 398, 558, 1103, 1464
AluI AGCT 8 cut(s) 116, 217, 277, 310, 398, 558, 1103, 1464
Alw21I GWGCWC 3 cut(s) 850, 1105, 1786
Alw26I GTCTC 2 cut(s) 506, 1624
Alw44I GTGCAC 1 cut(s) 1782
AlwI GGATC 3 cut(s) 1252, 1362, 1562
AoxI GGCC 4 cut(s) 109, 439, 916, 1335
ApaLI GTGCAC 1 cut(s) 1782
ApeKI GCWGC 3 cut(s) 4, 217, 764
ApoI RAATTY 3 cut(s) 233, 456, 1795
Asp700I GAANNNNTTC 2 cut(s) 207, 1818
AspS9I GGNCC 3 cut(s) 110, 440, 1760
AsuHPI GGTGA 2 cut(s) 316, 988
AvaII GGWCC 1 cut(s) 1760
BaeGI GKGCMC 1 cut(s) 1786
BalI TGGCCA 1 cut(s) 1337
BanI GGYRCC 2 cut(s) 653, 1665
BanII GRGCYC 1 cut(s) 1105
BbsI GAAGAC 1 cut(s) 28
Bbv12I GWGCWC 3 cut(s) 850, 1105, 1786
BbvI GCAGC 3 cut(s) 16, 204, 751
BccI CCATC 2 cut(s) 1082, 1387
BciT130I CCWGG 6 cut(s) 41, 171, 734, 1178, 1384, 1423
BciVI GTATCC 1 cut(s) 177
BcoDI GTCTC 2 cut(s) 506, 1624
BfaI CTAG 2 cut(s) 1295, 1811
BfmI CTRYAG 5 cut(s) 82, 765, 781, 1459, 1671
BfuAI ACCTGC 2 cut(s) 89, 852
BfuI GTATCC 1 cut(s) 177
BglI GCCNNNNNGGC 1 cut(s) 447
BisI GCNGC 3 cut(s) 5, 218, 765
BlsI GCNGC 3 cut(s) 6, 219, 766
BmcAI AGTACT 2 cut(s) 664, 994
Bme1390I CCNGG 6 cut(s) 41, 171, 734, 1178, 1384, 1423
Bme18I GGWCC 1 cut(s) 1760
BmgT120I GGNCC 3 cut(s) 110, 440, 1760
BmiI GGNNCC 4 cut(s) 655, 925, 1667, 1761
BmrFI CCNGG 6 cut(s) 41, 171, 734, 1178, 1384, 1423
BmrI ACTGGG 1 cut(s) 221
BmsI GCATC 4 cut(s) 602, 737, 1235, 1603
BmuI ACTGGG 1 cut(s) 221
BoxI GACNNNNGTC 1 cut(s) 498
BpiI GAAGAC 1 cut(s) 28
BpmI CTGGAG 1 cut(s) 1405
BpuEI CTTGAG 2 cut(s) 233, 1502
BsaJI CCNNGG 8 cut(s) 170, 732, 733, 919, 1177, 1240, 1350, 1383
Bsc4I CCNNNNNNNGG 1 cut(s) 1183
Bse1I ACTGG 3 cut(s) 227, 414, 498
Bse3DI GCAATG 2 cut(s) 196, 1401
BseBI CCWGG 6 cut(s) 41, 171, 734, 1178, 1384, 1423
BseDI CCNNGG 8 cut(s) 170, 732, 733, 919, 1177, 1240, 1350, 1383
BseGI GGATG 4 cut(s) 50, 728, 1093, 1250
BseLI CCNNNNNNNGG 1 cut(s) 1183
BseMI GCAATG 2 cut(s) 196, 1401
BseMII CTCAG 3 cut(s) 366, 1769, 1815
BseNI ACTGG 3 cut(s) 227, 414, 498
BseRI GAGGAG 6 cut(s) 491, 494, 497, 500, 503, 1731
BseSI GKGCMC 1 cut(s) 1786
BseXI GCAGC 3 cut(s) 16, 204, 751
BseYI CCCAGC 1 cut(s) 112
BsgI GTGCAG 1 cut(s) 1220
BshFI GGCC 4 cut(s) 111, 441, 918, 1337
BshNI GGYRCC 2 cut(s) 653, 1665
BsiHKAI GWGCWC 3 cut(s) 850, 1105, 1786
BslFI GGGAC 3 cut(s) 410, 946, 1053
BslI CCNNNNNNNGG 1 cut(s) 1183
BsmAI GTCTC 2 cut(s) 506, 1624
BsmFI GGGAC 3 cut(s) 410, 946, 1053
BsmI GAATGC 2 cut(s) 680, 1656
BsnI GGCC 4 cut(s) 111, 441, 918, 1337
Bsp1286I GDGCHC 3 cut(s) 850, 1105, 1786
Bsp143I GATC 4 cut(s) 1257, 1354, 1554, 1675
BspACI CCGC 4 cut(s) 199, 974, 1085, 1380
BspANI GGCC 4 cut(s) 111, 441, 918, 1337
BspCNI CTCAG 3 cut(s) 365, 1768, 1816
BspLI GGNNCC 4 cut(s) 655, 925, 1667, 1761
BspMAI CTGCAG 3 cut(s) 86, 769, 1675
BspMI ACCTGC 2 cut(s) 89, 852
BspPI GGATC 3 cut(s) 1252, 1362, 1562
BspT107I GGYRCC 2 cut(s) 653, 1665
BsrDI GCAATG 2 cut(s) 196, 1401
BsrI ACTGG 3 cut(s) 227, 414, 498
BssECI CCNNGG 8 cut(s) 170, 732, 733, 919, 1177, 1240, 1350, 1383
BssMI GATC 4 cut(s) 1257, 1354, 1554, 1675
BssT1I CCWWGG 3 cut(s) 919, 1240, 1350
Bst2UI CCWGG 6 cut(s) 41, 171, 734, 1178, 1384, 1423
Bst4CI ACNGT 3 cut(s) 785, 937, 1836
Bst6I CTCTTC 1 cut(s) 1005
BstAPI GCANNNNNTGC 1 cut(s) 725
BstC8I GCNNGC 4 cut(s) 299, 448, 570, 1159
BstDEI CTNAG 4 cut(s) 352, 996, 1755, 1824
BstF5I GGATG 4 cut(s) 50, 728, 1093, 1250
BstKTI GATC 4 cut(s) 1260, 1357, 1557, 1678
BstMAI GTCTC 2 cut(s) 506, 1624
BstMBI GATC 4 cut(s) 1257, 1354, 1554, 1675
BstMWI GCNNNNNNNGC 4 cut(s) 307, 447, 725, 1622
BstNI CCWGG 6 cut(s) 41, 171, 734, 1178, 1384, 1423
BstNSI RCATGY 1 cut(s) 331
BstPAI GACNNNNGTC 1 cut(s) 498
BstSCI CCNGG 6 cut(s) 39, 169, 732, 1176, 1382, 1421
BstSFI CTRYAG 5 cut(s) 82, 765, 781, 1459, 1671
BstSLI GKGCMC 1 cut(s) 1786
BstV1I GCAGC 3 cut(s) 16, 204, 751
BstV2I GAAGAC 1 cut(s) 28
BstX2I RGATCY 2 cut(s) 1257, 1554
BstYI RGATCY 2 cut(s) 1257, 1554
BsuI GTATCC 1 cut(s) 177
BsuRI GGCC 4 cut(s) 111, 441, 918, 1337
BtsCI GGATG 4 cut(s) 50, 728, 1093, 1250
BveI ACCTGC 2 cut(s) 89, 852
Cac8I GCNNGC 4 cut(s) 299, 448, 570, 1159
Cfr13I GGNCC 3 cut(s) 110, 440, 1760
Csp6I GTAC 6 cut(s) 663, 746, 752, 993, 1399, 1475
CspCI CAANNNNNGTGG 2 cut(s) 616, 651
CviAII CATG 6 cut(s) 107, 328, 581, 776, 1052, 1732
CviQI GTAC 6 cut(s) 663, 746, 752, 993, 1399, 1475
DdeI CTNAG 4 cut(s) 352, 996, 1755, 1824
DpnI GATC 4 cut(s) 1259, 1356, 1556, 1677
DpnII GATC 4 cut(s) 1257, 1354, 1554, 1675
DraI TTTAAA 1 cut(s) 1800
EaeI YGGCCR 1 cut(s) 1335
Eam1104I CTCTTC 1 cut(s) 1005
EarI CTCTTC 1 cut(s) 1005
Ecl136II GAGCTC 1 cut(s) 1103
Eco130I CCWWGG 3 cut(s) 919, 1240, 1350
Eco24I GRGCYC 1 cut(s) 1105
Eco32I GATATC 1 cut(s) 1273
Eco47I GGWCC 1 cut(s) 1760
Eco53kI GAGCTC 1 cut(s) 1103
Eco57I CTGAAG 3 cut(s) 378, 662, 1431
EcoICRI GAGCTC 1 cut(s) 1103
EcoO109I RGGNCCY 1 cut(s) 440
EcoRII CCWGG 6 cut(s) 39, 169, 732, 1176, 1382, 1421
EcoRV GATATC 1 cut(s) 1273
EcoT14I CCWWGG 3 cut(s) 919, 1240, 1350
EcoT38I GRGCYC 1 cut(s) 1105
ErhI CCWWGG 3 cut(s) 919, 1240, 1350
FaeI CATG 6 cut(s) 110, 331, 584, 779, 1055, 1735
FalI AAGNNNNNCTT 2 cut(s) 1771, 1803
FaqI GGGAC 3 cut(s) 410, 946, 1053
FatI CATG 6 cut(s) 106, 327, 580, 775, 1051, 1731
FauI CCCGC 1 cut(s) 192
FblI GTMKAC 2 cut(s) 321, 780
Fnu4HI GCNGC 3 cut(s) 5, 218, 765
FokI GGATG 4 cut(s) 37, 715, 1100, 1257
FriOI GRGCYC 1 cut(s) 1105
Fsp4HI GCNGC 3 cut(s) 5, 218, 765
FspBI CTAG 2 cut(s) 1295, 1811
GluI GCNGC 3 cut(s) 5, 218, 765
GsaI CCCAGC 1 cut(s) 116
GsuI CTGGAG 1 cut(s) 1405
HaeIII GGCC 4 cut(s) 111, 441, 918, 1337
Hin1II CATG 6 cut(s) 110, 331, 584, 779, 1055, 1735
HincII GTYRAC 1 cut(s) 1582
HindII GTYRAC 1 cut(s) 1582
HinfI GANTC 5 cut(s) 123, 262, 470, 808, 1077
HphI GGTGA 2 cut(s) 316, 988
Hpy166II GTNNAC 9 cut(s) 322, 608, 638, 698, 781, 1133, 1540, 1582, 1784
Hpy188I TCNGA 9 cut(s) 102, 122, 355, 475, 595, 790, 1324, 1453, 1704
Hpy188III TCNNGA 4 cut(s) 212, 1568, 1791, 1823
Hpy8I GTNNAC 9 cut(s) 322, 608, 638, 698, 781, 1133, 1540, 1582, 1784
HpyAV CCTTC 8 cut(s) 352, 431, 521, 1494, 1601, 1692, 1706, 1797
HpyCH4III ACNGT 3 cut(s) 785, 937, 1836
HpyF10VI GCNNNNNNNGC 4 cut(s) 307, 447, 725, 1622
HpyF3I CTNAG 4 cut(s) 352, 996, 1755, 1824
Hsp92II CATG 6 cut(s) 110, 331, 584, 779, 1055, 1735
Kzo9I GATC 4 cut(s) 1257, 1354, 1554, 1675
LmnI GCTCC 1 cut(s) 923
Lsp1109I GCAGC 3 cut(s) 16, 204, 751
LweI GCATC 4 cut(s) 602, 737, 1235, 1603
MaeI CTAG 2 cut(s) 1295, 1811
MalI GATC 4 cut(s) 1259, 1356, 1556, 1677
MboI GATC 4 cut(s) 1257, 1354, 1554, 1675
MboII GAAGA 8 cut(s) 28, 384, 569, 655, 1022, 1556, 1583, 1616
MfeI CAATTG 2 cut(s) 385, 1638
MflI RGATCY 2 cut(s) 1257, 1554
MhlI GDGCHC 3 cut(s) 850, 1105, 1786
MlsI TGGCCA 1 cut(s) 1337
MluNI TGGCCA 1 cut(s) 1337
MmeI TCCRAC 4 cut(s) 80, 1054, 1689, 1831
Mox20I TGGCCA 1 cut(s) 1337
MroXI GAANNNNTTC 2 cut(s) 207, 1818
MscI TGGCCA 1 cut(s) 1337
MseI TTAA 5 cut(s) 815, 882, 942, 1727, 1799
MslI CAYNNNNRTG 2 cut(s) 527, 1056
Msp20I TGGCCA 1 cut(s) 1337
MspA1I CMGCKG 1 cut(s) 398
MspR9I CCNGG 6 cut(s) 41, 171, 734, 1178, 1384, 1423
MunI CAATTG 2 cut(s) 385, 1638
Mva1269I GAATGC 2 cut(s) 680, 1656
MvaI CCWGG 6 cut(s) 41, 171, 734, 1178, 1384, 1423
MwoI GCNNNNNNNGC 4 cut(s) 307, 447, 725, 1622
NdeII GATC 4 cut(s) 1257, 1354, 1554, 1675
NlaIII CATG 6 cut(s) 110, 331, 584, 779, 1055, 1735
NlaIV GGNNCC 4 cut(s) 655, 925, 1667, 1761
NspI RCATGY 1 cut(s) 331
PaqCI CACCTGC 1 cut(s) 89
PasI CCCWGGG 1 cut(s) 733
PctI GAATGC 2 cut(s) 680, 1656
PdmI GAANNNNTTC 2 cut(s) 207, 1818
PfeI GAWTC 5 cut(s) 123, 262, 470, 808, 1077
PfoI TCCNGGA 1 cut(s) 1421
PkrI GCNGC 3 cut(s) 6, 219, 766
PshAI GACNNNNGTC 1 cut(s) 498
Psp124BI GAGCTC 1 cut(s) 1105
Psp6I CCWGG 6 cut(s) 39, 169, 732, 1176, 1382, 1421
PspFI CCCAGC 1 cut(s) 112
PspGI CCWGG 6 cut(s) 39, 169, 732, 1176, 1382, 1421
PspN4I GGNNCC 4 cut(s) 655, 925, 1667, 1761
PspPI GGNCC 3 cut(s) 110, 440, 1760
PstI CTGCAG 3 cut(s) 86, 769, 1675
PsuI RGATCY 2 cut(s) 1257, 1554
PvuII CAGCTG 1 cut(s) 398
RsaI GTAC 6 cut(s) 664, 747, 753, 994, 1400, 1476
RsaNI GTAC 6 cut(s) 663, 746, 752, 993, 1399, 1475
RseI CAYNNNNRTG 2 cut(s) 527, 1056
SacI GAGCTC 1 cut(s) 1105
SaqAI TTAA 5 cut(s) 815, 882, 942, 1727, 1799
SatI GCNGC 3 cut(s) 5, 218, 765
Sau3AI GATC 4 cut(s) 1257, 1354, 1554, 1675
Sau96I GGNCC 3 cut(s) 110, 440, 1760
ScaI AGTACT 2 cut(s) 664, 994
ScrFI CCNGG 6 cut(s) 41, 171, 734, 1178, 1384, 1423
SduI GDGCHC 3 cut(s) 850, 1105, 1786
SfaNI GCATC 4 cut(s) 602, 737, 1235, 1603
SfcI CTRYAG 5 cut(s) 82, 765, 781, 1459, 1671
SinI GGWCC 1 cut(s) 1760
SmiI ATTTAAAT 1 cut(s) 1800
SmiMI CAYNNNNRTG 2 cut(s) 527, 1056
SmlI CTYRAG 2 cut(s) 212, 1481
SmoI CTYRAG 2 cut(s) 212, 1481
SsiI CCGC 4 cut(s) 199, 974, 1085, 1380
SspMI CTAG 2 cut(s) 1295, 1811
SstI GAGCTC 1 cut(s) 1105
StyD4I CCNGG 6 cut(s) 39, 169, 732, 1176, 1382, 1421
StyI CCWWGG 3 cut(s) 919, 1240, 1350
SwaI ATTTAAAT 1 cut(s) 1800
TaaI ACNGT 3 cut(s) 785, 937, 1836
TaqI TCGA 1 cut(s) 1066
TatI WGTACW 3 cut(s) 662, 745, 992
TfiI GAWTC 5 cut(s) 123, 262, 470, 808, 1077
Tru1I TTAA 5 cut(s) 815, 882, 942, 1727, 1799
Tru9I TTAA 5 cut(s) 815, 882, 942, 1727, 1799
TseI GCWGC 3 cut(s) 4, 217, 764
TspDTI ATGAA 6 cut(s) 207, 531, 569, 729, 1038, 1548
VneI GTGCAC 1 cut(s) 1782
VpaK11BI GGWCC 1 cut(s) 1760
XapI RAATTY 3 cut(s) 233, 456, 1795
XceI RCATGY 1 cut(s) 331
XcmI CCANNNNNNNNNTGG 2 cut(s) 926, 1390
XmiI GTMKAC 2 cut(s) 321, 780
XmnI GAANNNNTTC 2 cut(s) 207, 1818
XspI CTAG 2 cut(s) 1295, 1811
ZrmI AGTACT 2 cut(s) 664, 994
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.