MD07G1070800.v1.1

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0000107
Physical Location & Seq
Forward (+)
6687070 .. 6689641
2572 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1070800.v1.1.491

Sequence Viewer

Length: 1821 bp
ATGCAGCAATTGATCATCTCTTCCTTTTGCGTATTATTGTTATTGGCCTTCATCGAAGGGGTCGGGGGAAGCCAATATGCGTGCACAGAGTCCAAGTGCGGCGATGATCATGGCCTGGCTATCCATTTCCCATTCCGCCGCGGGCATCATTCCGGGGATAATAGGATTGAATTCAATGGGAGATATGAAACGGTTCTTGACCAGCCAATAGTGGTAGTAAAATTCCTTGTCAAAAACATAGATTACAAGCATCAGGAAATCGAAGTATATCACCCATATAACTGCCTGCTGTTGAAGCCCTTGGAAATCACCAATACGGTAATCTCTCCCTTCTACTTCACAGGTAGCATACGTAATGTTACCTTATTCCGTTGCCCTAATCTTGTTGAAAGAGATATATATGCCTATCAAGTCCCCTGCCTTGGTGGCCATGGAGACACAATTTATGGCGTCTCTTCTTTCTTTGAATTATTTGAAAGCTTCACAGAACTACAGTCTTGTACAAAGATGTATGATGTTTTATCAGTTCCATTTGGCGATTGGGTAAATGGCAATGATATTCTTCAATTCAAATGGTCCAAACCAAATTGTACAAAATGTGAAGCAGAGGGCAAGAGGTGTAGATTGAAGATCAATGGCACCAAGAGTGAAATTGAATGTGTTCACCATAGTAAACCAAGCAAAACAAAGACATTTGTGGCCACAGGAGCAACCCTGGGTTCATTTGTTCTGTTACTAGGGGTCTTTGTAGCATATCATGTCTATAGCGCTGATCAAAAGGAAAAAGAGAATCGATTAAAACTTGAAACATTTTTAGCGGACTACAAAGCTCTCAAGCCAAGCAGATATTCATATGCAGATATTAAGAGGATTACAAATCAATTCAAGTACAAGTTAGGCCAAGGAGCCTACGGAACTGTTTTTAAAGGAAAACTTTCTTCTGAATGCTTTGTTGCTGTGAAGGTACTTAACAATTCTAAGGGCGATGGGGAAGAGTTCGTAAATGAAGTGGGAGCAATGGGTCATATTCACCACGTCAATGTGGTTCGCTTGGTTGGTTTTTGTGCAGATGGATTTAGACGAGCTCTGGTTTACGAGTTCTTTCCCAATGGTTCACTCCAGGATTATATTTCATCAGTAGATAGAAAGAACTCTTTCCTTGGTTGGGATAAGTTGCAAGATATTGCTATCGGCATAGCCAAAGGAATAGAATATCTTCACCTGGGATGCGATCTACGAATCCTCCATTTCGATATCAAACCCCACAATATTTTGCTAGACCAAAACTTCACACCAAAAATCTCTGATTTTGGTCTGGCCAAGTTATGTTCCAAGGATCAAAGCATAGTGTCAATGACTACAGCAAGGGGGACCATGGGCTACATTGCACCCGAAGTGTTTTCCAGGAATTTTGGAAATGTGTCTTACAAGGCAGATGTTTATAGTTTTGGAATGCTGCTGCTTGAGATGATAGGAGGAAAGAAGAATATTGGTTCAACCACAGAGAACACGACCAATGAAATTTACTGTCCAGAATGGATTTATAACCTTCTAGAGGAAGGAGATGACCTACGAATCCATATCGGGGAAGAAGGGGATGATAATATTCCAAAGCAACTTGCAATTGTAGGGCTCTGGTGCATCCAGTGGCACCCGGTGGATCGTCCTTCCATGAAAACAGTTGTTCAGATGCTAGGAGGAGGAGAAAACTTGAGGATGCCTCCTAATCCTTTTGTTTCTGCAGGTCCTACACAAACATCACAGGCAGGCATCCCCAAAAGGCGCGTCCTAGAGTTAGAAGCAATTGCTGAATTAGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase

Protein Analysis

607

Amino Acids

68.1

Weight (kDa)

6.54

Isoelectric Point (pI)

41.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 295 - 565 7.5e-44 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 296 - 563 6.4e-48 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1545
Acc36I ACCTGC 1 cut(s) 1733
AccB1I GGYRCC 2 cut(s) 638, 1650
AccII CGCG 2 cut(s) 141, 1785
AciI CCGC 5 cut(s) 99, 136, 139, 141, 818
AclWI GGATC 2 cut(s) 1344, 1668
AcoI YGGCCR 3 cut(s) 427, 699, 1317
AcsI RAATTY 4 cut(s) 170, 221, 1408, 1521
AcyI GRCGYC 1 cut(s) 450
AdeI CACNNNGTG 1 cut(s) 1657
AfaI GTAC 4 cut(s) 502, 592, 890, 966
AfeI AGCGCT 1 cut(s) 769
AfiI CCNNNNNNNGG 4 cut(s) 422, 1165, 1555, 1585
AjiI CACGTC 1 cut(s) 1036
AjnI CCWGG 5 cut(s) 114, 714, 1119, 1221, 1403
AjuI GAANNNNNNNTTGG 2 cut(s) 832, 864
AluBI AGCT 3 cut(s) 480, 830, 1085
AluI AGCT 3 cut(s) 480, 830, 1085
Alw21I GWGCWC 2 cut(s) 86, 1087
Alw26I GTCTC 2 cut(s) 429, 457
Alw44I GTGCAC 1 cut(s) 82
AlwI GGATC 2 cut(s) 1344, 1668
Aor51HI AGCGCT 1 cut(s) 769
AoxI GGCC 6 cut(s) 45, 112, 427, 699, 898, 1317
ApaLI GTGCAC 1 cut(s) 82
ApeKI GCWGC 3 cut(s) 4, 1456, 1459
ApoI RAATTY 4 cut(s) 170, 221, 1408, 1521
ArsI GACNNNNNNTTYG 2 cut(s) 1770, 1802
Asp700I GAANNNNTTC 5 cut(s) 192, 660, 934, 1154, 1215
AspLEI GCGC 2 cut(s) 770, 1785
AspS9I GGNCC 3 cut(s) 576, 1371, 1745
AsuC2I CCSGG 2 cut(s) 154, 1655
AsuHPI GGTGA 5 cut(s) 263, 301, 656, 1022, 1211
AvaII GGWCC 3 cut(s) 576, 1371, 1745
BaeGI GKGCMC 1 cut(s) 86
BalI TGGCCA 3 cut(s) 429, 701, 1319
BanI GGYRCC 2 cut(s) 638, 1650
BanII GRGCYC 2 cut(s) 1087, 1635
Bbv12I GWGCWC 2 cut(s) 86, 1087
BbvI GCAGC 3 cut(s) 16, 1443, 1446
BccI CCATC 2 cut(s) 980, 1064
BciT130I CCWGG 5 cut(s) 116, 716, 1121, 1223, 1405
BclI TGATCA 3 cut(s) 12, 106, 772
BcnI CCSGG 2 cut(s) 154, 1655
BcoDI GTCTC 2 cut(s) 429, 457
BfaI CTAG 5 cut(s) 737, 1277, 1553, 1694, 1790
BfmI CTRYAG 4 cut(s) 491, 763, 1359, 1740
BfoI RGCGCY 1 cut(s) 771
BfuAI ACCTGC 1 cut(s) 1733
BglI GCCNNNNNGGC 1 cut(s) 426
BisI GCNGC 5 cut(s) 5, 100, 139, 1457, 1460
BlsI GCNGC 5 cut(s) 6, 101, 140, 1458, 1461
Bme1390I CCNGG 7 cut(s) 116, 154, 716, 1121, 1223, 1405, 1655
Bme18I GGWCC 3 cut(s) 576, 1371, 1745
BmgBI CACGTC 1 cut(s) 1036
BmgT120I GGNCC 3 cut(s) 576, 1371, 1745
BmiI GGNNCC 4 cut(s) 640, 907, 1372, 1652
BmrFI CCNGG 7 cut(s) 116, 154, 716, 1121, 1223, 1405, 1655
BmsI GCATC 7 cut(s) 154, 259, 1217, 1650, 1680, 1707, 1779
BplI GAGNNNNNCTC 2 cut(s) 1705, 1737
BpmI CTGGAG 1 cut(s) 1103
BpuEI CTTGAG 3 cut(s) 818, 1484, 1732
BpuMI CCSGG 2 cut(s) 154, 1655
Bsa29I ATCGAT 1 cut(s) 793
BsaAI YACGTR 1 cut(s) 353
BsaHI GRCGYC 1 cut(s) 450
BsaXI ACNNNNNCTCC 2 cut(s) 1227, 1257
Bsc4I CCNNNNNNNGG 4 cut(s) 422, 1165, 1555, 1585
Bse1I ACTGG 1 cut(s) 1645
Bse3DI GCAATG 3 cut(s) 559, 1023, 1383
BseBI CCWGG 5 cut(s) 116, 716, 1121, 1223, 1405
BseCI ATCGAT 1 cut(s) 793
BseGI GGATG 5 cut(s) 1232, 1603, 1641, 1722, 1770
BseLI CCNNNNNNNGG 4 cut(s) 422, 1165, 1555, 1585
BseMI GCAATG 3 cut(s) 559, 1023, 1383
BseNI ACTGG 1 cut(s) 1645
BseRI GAGGAG 2 cut(s) 1713, 1716
BseSI GKGCMC 1 cut(s) 86
BseXI GCAGC 3 cut(s) 16, 1443, 1446
BsgI GTGCAG 1 cut(s) 1086
Bsh1236I CGCG 2 cut(s) 141, 1785
BshFI GGCC 6 cut(s) 47, 114, 429, 701, 900, 1319
BshNI GGYRCC 2 cut(s) 638, 1650
BshVI ATCGAT 1 cut(s) 793
BsiHKAI GWGCWC 2 cut(s) 86, 1087
BsiSI CCGG 2 cut(s) 153, 1655
BslFI GGGAC 2 cut(s) 398, 1384
BslI CCNNNNNNNGG 4 cut(s) 422, 1165, 1555, 1585
BsmAI GTCTC 2 cut(s) 429, 457
BsmBI CGTCTC 1 cut(s) 457
BsmFI GGGAC 2 cut(s) 398, 1384
BsmI GAATGC 2 cut(s) 950, 1458
BsnI GGCC 6 cut(s) 47, 114, 429, 701, 900, 1319
Bsp1286I GDGCHC 3 cut(s) 86, 1087, 1635
Bsp1407I TGTACA 2 cut(s) 500, 590
Bsp143I GATC 7 cut(s) 12, 106, 630, 772, 1231, 1336, 1660
Bsp19I CCATGG 2 cut(s) 430, 1374
BspACI CCGC 5 cut(s) 99, 136, 139, 141, 818
BspANI GGCC 6 cut(s) 47, 114, 429, 701, 900, 1319
BspDI ATCGAT 1 cut(s) 793
BspFNI CGCG 2 cut(s) 141, 1785
BspLI GGNNCC 4 cut(s) 640, 907, 1372, 1652
BspMAI CTGCAG 1 cut(s) 1744
BspMI ACCTGC 1 cut(s) 1733
BspPI GGATC 2 cut(s) 1344, 1668
BspT107I GGYRCC 2 cut(s) 638, 1650
BsrDI GCAATG 3 cut(s) 559, 1023, 1383
BsrGI TGTACA 2 cut(s) 500, 590
BsrI ACTGG 1 cut(s) 1645
BssMI GATC 7 cut(s) 12, 106, 630, 772, 1231, 1336, 1660
BssNI GRCGYC 1 cut(s) 450
BssT1I CCWWGG 7 cut(s) 300, 421, 430, 901, 1159, 1332, 1374
Bst2UI CCWGG 5 cut(s) 116, 716, 1121, 1223, 1405
Bst4CI ACNGT 6 cut(s) 193, 319, 495, 919, 1529, 1681
Bst6I CTCTTC 3 cut(s) 25, 460, 987
BstACI GRCGYC 1 cut(s) 450
BstAUI TGTACA 2 cut(s) 500, 590
BstBAI YACGTR 1 cut(s) 353
BstC8I GCNNGC 4 cut(s) 82, 143, 287, 1768
BstDEI CTNAG 1 cut(s) 978
BstDSI CCRYGG 3 cut(s) 139, 430, 1374
BstENI CCTNNNNNAGG 1 cut(s) 1553
BstF5I GGATG 5 cut(s) 1232, 1603, 1641, 1722, 1770
BstFNI CGCG 2 cut(s) 141, 1785
BstH2I RGCGCY 1 cut(s) 771
BstHHI GCGC 2 cut(s) 770, 1785
BstKTI GATC 7 cut(s) 15, 109, 633, 775, 1234, 1339, 1663
BstMAI GTCTC 2 cut(s) 429, 457
BstMBI GATC 7 cut(s) 12, 106, 630, 772, 1231, 1336, 1660
BstMWI GCNNNNNNNGC 3 cut(s) 295, 426, 707
BstNI CCWGG 5 cut(s) 116, 716, 1121, 1223, 1405
BstSCI CCNGG 7 cut(s) 114, 152, 714, 1119, 1221, 1403, 1653
BstSFI CTRYAG 4 cut(s) 491, 763, 1359, 1740
BstSLI GKGCMC 1 cut(s) 86
BstSNI TACGTA 1 cut(s) 353
BstUI CGCG 2 cut(s) 141, 1785
BstV1I GCAGC 3 cut(s) 16, 1443, 1446
Bsu15I ATCGAT 1 cut(s) 793
BsuRI GGCC 6 cut(s) 47, 114, 429, 701, 900, 1319
BsuTUI ATCGAT 1 cut(s) 793
BtgI CCRYGG 3 cut(s) 139, 430, 1374
BtgZI GCGATG 2 cut(s) 117, 999
BtrI CACGTC 1 cut(s) 1036
BtsCI GGATG 5 cut(s) 1232, 1603, 1641, 1722, 1770
BtsIMutI CAGTG 1 cut(s) 1652
BveI ACCTGC 1 cut(s) 1733
Cac8I GCNNGC 4 cut(s) 82, 143, 287, 1768
CfoI GCGC 2 cut(s) 770, 1785
Cfr13I GGNCC 3 cut(s) 576, 1371, 1745
Cfr42I CCGCGG 1 cut(s) 142
ClaI ATCGAT 1 cut(s) 793
CseI GACGC 2 cut(s) 439, 1774
Csp6I GTAC 4 cut(s) 501, 591, 889, 965
CviAII CATG 5 cut(s) 110, 431, 758, 1375, 1672
CviQI GTAC 4 cut(s) 501, 591, 889, 965
DdeI CTNAG 1 cut(s) 978
DpnI GATC 7 cut(s) 14, 108, 632, 774, 1233, 1338, 1662
DpnII GATC 7 cut(s) 12, 106, 630, 772, 1231, 1336, 1660
DraI TTTAAA 1 cut(s) 925
DraIII CACNNNGTG 1 cut(s) 1657
EaeI YGGCCR 3 cut(s) 427, 699, 1317
Eam1104I CTCTTC 3 cut(s) 25, 460, 987
EarI CTCTTC 3 cut(s) 25, 460, 987
EciI GGCGGA 1 cut(s) 125
Ecl136II GAGCTC 1 cut(s) 1085
Eco105I TACGTA 1 cut(s) 353
Eco130I CCWWGG 7 cut(s) 300, 421, 430, 901, 1159, 1332, 1374
Eco24I GRGCYC 2 cut(s) 1087, 1635
Eco32I GATATC 1 cut(s) 1255
Eco47I GGWCC 3 cut(s) 576, 1371, 1745
Eco47III AGCGCT 1 cut(s) 769
Eco53kI GAGCTC 1 cut(s) 1085
EcoICRI GAGCTC 1 cut(s) 1085
EcoNI CCTNNNNNAGG 1 cut(s) 1553
EcoO109I RGGNCCY 1 cut(s) 1745
EcoRI GAATTC 1 cut(s) 170
EcoRII CCWGG 5 cut(s) 114, 714, 1119, 1221, 1403
EcoRV GATATC 1 cut(s) 1255
EcoT14I CCWWGG 7 cut(s) 300, 421, 430, 901, 1159, 1332, 1374
EcoT38I GRGCYC 2 cut(s) 1087, 1635
ErhI CCWWGG 7 cut(s) 300, 421, 430, 901, 1159, 1332, 1374
Esp3I CGTCTC 1 cut(s) 457
FaeI CATG 5 cut(s) 113, 434, 761, 1378, 1675
FalI AAGNNNNNCTT 2 cut(s) 918, 950
FaqI GGGAC 2 cut(s) 398, 1384
FatI CATG 5 cut(s) 109, 430, 757, 1374, 1671
FauI CCCGC 1 cut(s) 134
FauNDI CATATG 1 cut(s) 853
FbaI TGATCA 3 cut(s) 12, 106, 772
Fnu4HI GCNGC 5 cut(s) 5, 100, 139, 1457, 1460
FokI GGATG 5 cut(s) 1239, 1610, 1628, 1729, 1757
FriOI GRGCYC 2 cut(s) 1087, 1635
Fsp4HI GCNGC 5 cut(s) 5, 100, 139, 1457, 1460
FspBI CTAG 5 cut(s) 737, 1277, 1553, 1694, 1790
GlaI GCGC 2 cut(s) 769, 1784
GluI GCNGC 5 cut(s) 5, 100, 139, 1457, 1460
GsuI CTGGAG 1 cut(s) 1103
HaeII RGCGCY 1 cut(s) 771
HaeIII GGCC 6 cut(s) 47, 114, 429, 701, 900, 1319
HapII CCGG 2 cut(s) 153, 1655
HgaI GACGC 2 cut(s) 439, 1774
HhaI GCGC 2 cut(s) 770, 1785
Hin1I GRCGYC 1 cut(s) 450
Hin1II CATG 5 cut(s) 113, 434, 761, 1378, 1675
Hin6I GCGC 2 cut(s) 768, 1783
HinP1I GCGC 2 cut(s) 768, 1783
HindIII AAGCTT 1 cut(s) 478
HinfI GANTC 4 cut(s) 89, 790, 1239, 1575
HpaII CCGG 2 cut(s) 153, 1655
HphI GGTGA 5 cut(s) 263, 301, 656, 1022, 1211
Hpy166II GTNNAC 5 cut(s) 84, 664, 674, 1093, 1115
Hpy188I TCNGA 3 cut(s) 943, 1306, 1689
Hpy188III TCNNGA 4 cut(s) 197, 254, 1532, 1553
Hpy8I GTNNAC 5 cut(s) 84, 664, 674, 1093, 1115
HpyAV CCTTC 8 cut(s) 50, 58, 340, 955, 1553, 1559, 1586, 1677
HpyCH4III ACNGT 6 cut(s) 193, 319, 495, 919, 1529, 1681
HpyCH4IV ACGT 2 cut(s) 352, 1035
HpyCH4V TGCA 9 cut(s) 4, 84, 857, 1067, 1177, 1388, 1622, 1641, 1742
HpyF10VI GCNNNNNNNGC 3 cut(s) 295, 426, 707
HpyF3I CTNAG 1 cut(s) 978
HpySE526I ACGT 2 cut(s) 352, 1035
Hsp92I GRCGYC 1 cut(s) 450
Hsp92II CATG 5 cut(s) 113, 434, 761, 1378, 1675
HspAI GCGC 2 cut(s) 768, 1783
Ksp22I TGATCA 3 cut(s) 12, 106, 772
KspI CCGCGG 1 cut(s) 142
Kzo9I GATC 7 cut(s) 12, 106, 630, 772, 1231, 1336, 1660
LmnI GCTCC 3 cut(s) 707, 905, 1013
Lsp1109I GCAGC 3 cut(s) 16, 1443, 1446
LweI GCATC 7 cut(s) 154, 259, 1217, 1650, 1680, 1707, 1779
MaeI CTAG 5 cut(s) 737, 1277, 1553, 1694, 1790
MaeII ACGT 2 cut(s) 352, 1035
MaeIII GTNAC 2 cut(s) 358, 732
MalI GATC 7 cut(s) 14, 108, 632, 774, 1233, 1338, 1662
MboI GATC 7 cut(s) 12, 106, 630, 772, 1231, 1336, 1660
MboII GAAGA 9 cut(s) 12, 447, 554, 640, 930, 1004, 1208, 1495, 1601
MfeI CAATTG 3 cut(s) 8, 1623, 1803
MhlI GDGCHC 3 cut(s) 86, 1087, 1635
MlsI TGGCCA 3 cut(s) 429, 701, 1319
MluNI TGGCCA 3 cut(s) 429, 701, 1319
MlyI GAGTC 1 cut(s) 98
Mox20I TGGCCA 3 cut(s) 429, 701, 1319
MroXI GAANNNNTTC 5 cut(s) 192, 660, 934, 1154, 1215
MscI TGGCCA 3 cut(s) 429, 701, 1319
MseI TTAA 4 cut(s) 797, 864, 924, 969
MslI CAYNNNNRTG 1 cut(s) 1038
Msp20I TGGCCA 3 cut(s) 429, 701, 1319
MspA1I CMGCKG 1 cut(s) 141
MspI CCGG 2 cut(s) 153, 1655
MspR9I CCNGG 7 cut(s) 116, 154, 716, 1121, 1223, 1405, 1655
MunI CAATTG 3 cut(s) 8, 1623, 1803
Mva1269I GAATGC 2 cut(s) 950, 1458
MvaI CCWGG 5 cut(s) 116, 716, 1121, 1223, 1405
MvnI CGCG 2 cut(s) 141, 1785
MwoI GCNNNNNNNGC 3 cut(s) 295, 426, 707
NciI CCSGG 2 cut(s) 154, 1655
NcoI CCATGG 2 cut(s) 430, 1374
NdeI CATATG 1 cut(s) 853
NdeII GATC 7 cut(s) 12, 106, 630, 772, 1231, 1336, 1660
NlaIII CATG 5 cut(s) 113, 434, 761, 1378, 1675
NlaIV GGNNCC 4 cut(s) 640, 907, 1372, 1652
PasI CCCWGGG 1 cut(s) 715
PctI GAATGC 2 cut(s) 950, 1458
PdmI GAANNNNTTC 5 cut(s) 192, 660, 934, 1154, 1215
PfeI GAWTC 3 cut(s) 790, 1239, 1575
PfoI TCCNGGA 2 cut(s) 1119, 1403
PkrI GCNGC 5 cut(s) 6, 101, 140, 1458, 1461
PleI GAGTC 1 cut(s) 97
PpsI GAGTC 1 cut(s) 97
Ppu21I YACGTR 1 cut(s) 353
PpuMI RGGWCCY 1 cut(s) 1745
PsiI TTATAA 1 cut(s) 1545
Psp124BI GAGCTC 1 cut(s) 1087
Psp5II RGGWCCY 1 cut(s) 1745
Psp6I CCWGG 5 cut(s) 114, 714, 1119, 1221, 1403
PspGI CCWGG 5 cut(s) 114, 714, 1119, 1221, 1403
PspN4I GGNNCC 4 cut(s) 640, 907, 1372, 1652
PspPI GGNCC 3 cut(s) 576, 1371, 1745
PspPPI RGGWCCY 1 cut(s) 1745
PstI CTGCAG 1 cut(s) 1744
RsaI GTAC 4 cut(s) 502, 592, 890, 966
RsaNI GTAC 4 cut(s) 501, 591, 889, 965
RseI CAYNNNNRTG 1 cut(s) 1038
SacI GAGCTC 1 cut(s) 1087
SacII CCGCGG 1 cut(s) 142
SaqAI TTAA 4 cut(s) 797, 864, 924, 969
SatI GCNGC 5 cut(s) 5, 100, 139, 1457, 1460
Sau3AI GATC 7 cut(s) 12, 106, 630, 772, 1231, 1336, 1660
Sau96I GGNCC 3 cut(s) 576, 1371, 1745
SchI GAGTC 1 cut(s) 98
ScrFI CCNGG 7 cut(s) 116, 154, 716, 1121, 1223, 1405, 1655
SduI GDGCHC 3 cut(s) 86, 1087, 1635
SfaNI GCATC 7 cut(s) 154, 259, 1217, 1650, 1680, 1707, 1779
SfcI CTRYAG 4 cut(s) 491, 763, 1359, 1740
Sfr303I CCGCGG 1 cut(s) 142
SgrBI CCGCGG 1 cut(s) 142
SinI GGWCC 3 cut(s) 576, 1371, 1745
SmiMI CAYNNNNRTG 1 cut(s) 1038
SmlI CTYRAG 3 cut(s) 833, 1463, 1711
SmoI CTYRAG 3 cut(s) 833, 1463, 1711
SnaBI TACGTA 1 cut(s) 353
SsiI CCGC 5 cut(s) 99, 136, 139, 141, 818
SspI AATATT 3 cut(s) 1270, 1489, 1606
SspMI CTAG 5 cut(s) 737, 1277, 1553, 1694, 1790
SstI GAGCTC 1 cut(s) 1087
StyD4I CCNGG 7 cut(s) 114, 152, 714, 1119, 1221, 1403, 1653
StyI CCWWGG 7 cut(s) 300, 421, 430, 901, 1159, 1332, 1374
TaaI ACNGT 6 cut(s) 193, 319, 495, 919, 1529, 1681
TaiI ACGT 2 cut(s) 355, 1038
TaqI TCGA 4 cut(s) 54, 261, 793, 1251
TatI WGTACW 3 cut(s) 500, 590, 888
TauI GCSGC 2 cut(s) 102, 141
TfiI GAWTC 3 cut(s) 790, 1239, 1575
Tru1I TTAA 4 cut(s) 797, 864, 924, 969
Tru9I TTAA 4 cut(s) 797, 864, 924, 969
TscAI CASTG 1 cut(s) 1652
TseI GCWGC 3 cut(s) 4, 1456, 1459
TspDTI ATGAA 8 cut(s) 40, 201, 711, 840, 1020, 1122, 1533, 1688
TspGWI ACGGA 2 cut(s) 359, 927
TspRI CASTG 1 cut(s) 1652
VneI GTGCAC 1 cut(s) 82
VpaK11BI GGWCC 3 cut(s) 576, 1371, 1745
XagI CCTNNNNNAGG 1 cut(s) 1553
XapI RAATTY 4 cut(s) 170, 221, 1408, 1521
XbaI TCTAGA 1 cut(s) 1552
XcmI CCANNNNNNNNNTGG 1 cut(s) 537
XmnI GAANNNNTTC 5 cut(s) 192, 660, 934, 1154, 1215
XspI CTAG 5 cut(s) 737, 1277, 1553, 1694, 1790
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.