Rw1G007100

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0000107
Physical Location & Seq
Forward (+)
14949173 .. 14951444
2272 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G007100.1

Sequence Viewer

Length: 1797 bp
ATGCAGCAAACTCTCATTTCTTCCTTTTGCTTCATCTTGCTGGCTTTCTCCTCCAAAGTCCTTGGTGAAAAACCGAGGTGTGGGAAACATGGCCCAGCTATCAAATTCCCTTTTAGCTTCAAAGGTAGCCAGCACCCAGAAAATTCTGGGTATCCTGGGTTTCTTGTATCCTGCAATGAAAAGCAGGAAACCATTCTTGAGCTGCCAATCCCAGTTAAATTCCCAATCAAAACCATAGACTATGAGAATCAGTATATCCAGCTATATGACCCAGAAAATTGCTTGGTGGTGAAGCTATTGAATGTCCGCAACTGGTCAATCTCTCCATTCCTCTACTCAAAAGACCAAATAGCTGATATTACCTTATTCAATTGTTCTTCAGCTGAAAGGAAATCGTACTATATGGATCCAGTCCCCTGCTTTAATGGCCCTGGCTACCAAATCTACTCGGTTTCTTCTTCCCAAAACATCGAGGACTTGCCCCTCCTGTCTTGTACAAAGATGCGTAATCTTTCACTAGTTCCATACAGCCCCGACCCGTATGCACCTCCAACTCCAACAAATCTTTATTTGGAATGGTCTGAACCAAATTGTGGACAATGTGAAGCAAATGGCACGATATGTGATTTCAAGAAGAATGGCACCACAAGTAATGAAATTGAATGCCTTCCCAGGAAGAAAGAAGGCGCATCCCTGGGTTCATTTGTAATCATACTACTTGCTGCTGCAGCTTATCATGTCTATAGTTCTGACAGAAAAGAAAAACAGAATCAATCAAAAATTGAAATTTTTTTAGAGGATTACAGAGCTCTCAAACCAAGCAGATACTCTTATGCAGATATCAAGAGGATTACAAATCAGTTCAAGGACAAATTAGGCCAAGGAGCCTATGGAACTGTTTATAAGGGAAAGCTTTCTTCTGAATGTTTTGTTGCTGTCAAAGTCCTCAATAGTACAAAGGGGGACGGGGAAGAGTTTGTAAATGAAGTGGGAACAATGGGTCATATCCACCATGTCAATGTGGTTCGCTTGGTTGGATTCTGTGCTGATGGGTTTAGACGAGCTCTTGTTTATGACTTCTTACCTAATGGTTCACTGCAAGATTTCATTTCATCAGCAGACAATAACAATTCTTTCCTTGGTTGGGATAAGTTGCAAGATATTGCTCTAGGCATAGCCAAAGGAATTGAATATCTACACCAAGGATGCGATCAACGAATCCTCCATTTCGATATCAAACCCCACAATGTTTTGCTTGACCATAACTTCACCCCAAAGATTTCTGATTTTGGTTTGGCCAAATTATGTTCCAAGGATCAGAGTATAGTGTCAATGACTACAGCTAGGGGAACGATGGGGTACATTGCACCTGAAGTGTTCTCCAGAAACTTTGGAAATGTATCCTATAAGTCAGATGTGTATAGTTATGGAATGGTACTGCTCGAGATGGTAGGAGGAAGAAAGAACATCAGTTCAACCACAGAGAACACAACTGAAGTTTACTACCCAGAATGGATCTATAATCTACTGGAAGAAGGTGAAGACCTTCGAATCCATGTTGGGGAAGAAGGAGATGCTAAAATTGCAAAGAGACTTGCGATTGTCGGTCTCTGGTGCATCCAATGGCACCCGGTAGATCGTCCTTCTATGAAAGGGGTGGTTCAGATGTTGGAAGGAGGAGAAAACTTAACTATGCCTCCAAATCCTTTTTCCTCTCAAGATCCTACAGGAACAAGTGCAAGTACACCTGCCAGAAGATTAAACCTTCAACTGGAAGCAATTGCCGAGTTAGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase

Protein Analysis

598

Amino Acids

66.92

Weight (kDa)

5.92

Isoelectric Point (pI)

40.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 25 - 90 1e-13 Wall-associated receptor kinase galacturonan-binding
PK_Tyr_Ser-Thr PF07714 287 - 557 1.6e-44 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 288 - 555 4.9e-47 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 903
AarI CACCTGC 1 cut(s) 1756
Acc36I ACCTGC 1 cut(s) 1756
AccB1I GGYRCC 2 cut(s) 641, 1626
AccB7I CCANNNNNTGG 1 cut(s) 593
AciI CCGC 1 cut(s) 307
AclWI GGATC 5 cut(s) 401, 414, 1323, 1523, 1715
AcoI YGGCCR 1 cut(s) 1296
AcsI RAATTY 4 cut(s) 104, 142, 218, 786
AcuI CTGAAG 3 cut(s) 363, 1392, 1515
AfaI GTAC 6 cut(s) 398, 496, 955, 1361, 1437, 1744
AfiI CCNNNNNNNGG 5 cut(s) 80, 593, 1144, 1561, 1771
AhlI ACTAGT 1 cut(s) 517
AjnI CCWGG 4 cut(s) 154, 430, 671, 693
AjuI GAANNNNNNNTTGG 2 cut(s) 1693, 1725
Alw21I GWGCWC 2 cut(s) 811, 1066
Alw26I GTCTC 2 cut(s) 1585, 1613
AlwI GGATC 5 cut(s) 401, 414, 1323, 1523, 1715
Ama87I CYCGRG 1 cut(s) 1442
AoxI GGCC 4 cut(s) 91, 427, 877, 1296
ApeKI GCWGC 5 cut(s) 4, 202, 722, 725, 728
ApoI RAATTY 4 cut(s) 104, 142, 218, 786
Asp700I GAANNNNTTC 4 cut(s) 192, 666, 913, 1545
AspLEI GCGC 1 cut(s) 689
AspS9I GGNCC 2 cut(s) 92, 428
AsuC2I CCSGG 1 cut(s) 1631
AsuHPI GGTGA 4 cut(s) 77, 301, 1261, 1550
AsuII TTCGAA 1 cut(s) 1549
AvaI CYCGRG 1 cut(s) 1442
BalI TGGCCA 1 cut(s) 1298
BamHI GGATCC 1 cut(s) 406
BanI GGYRCC 2 cut(s) 641, 1626
BanII GRGCYC 2 cut(s) 811, 1066
BbsI GAAGAC 1 cut(s) 1548
Bbv12I GWGCWC 2 cut(s) 811, 1066
BbvI GCAGC 5 cut(s) 16, 189, 709, 712, 740
BccI CCATC 3 cut(s) 1043, 1348, 1441
BcgI CGANNNNNNTGC 2 cut(s) 524, 558
BciT130I CCWGG 4 cut(s) 156, 432, 673, 695
BciVI GTATCC 3 cut(s) 162, 178, 1411
BcnI CCSGG 1 cut(s) 1631
BcoDI GTCTC 2 cut(s) 1585, 1613
BcuI ACTAGT 1 cut(s) 517
BfaI CTAG 3 cut(s) 518, 1169, 1344
BfmI CTRYAG 4 cut(s) 726, 742, 1338, 1725
BfuAI ACCTGC 1 cut(s) 1756
BfuI GTATCC 3 cut(s) 162, 178, 1411
BisI GCNGC 5 cut(s) 5, 203, 723, 726, 729
BlsI GCNGC 5 cut(s) 6, 204, 724, 727, 730
Bme1390I CCNGG 5 cut(s) 156, 432, 673, 695, 1631
BmeT110I CYCGRG 1 cut(s) 1442
BmgT120I GGNCC 2 cut(s) 92, 428
BmiI GGNNCC 4 cut(s) 408, 643, 886, 1628
BmrFI CCNGG 5 cut(s) 156, 432, 673, 695, 1631
BmrI ACTGGG 1 cut(s) 206
BmsI GCATC 5 cut(s) 492, 698, 1196, 1564, 1626
BmuI ACTGGG 1 cut(s) 206
BpiI GAAGAC 1 cut(s) 1548
BpmI CTGGAG 1 cut(s) 1366
Bpu14I TTCGAA 1 cut(s) 1549
BpuEI CTTGAG 2 cut(s) 218, 1701
BpuMI CCSGG 1 cut(s) 1631
BsaI GGTCTC 1 cut(s) 1613
BsaXI ACNNNNNCTCC 4 cut(s) 1206, 1236, 1681, 1711
Bsc4I CCNNNNNNNGG 5 cut(s) 80, 593, 1144, 1561, 1771
Bse1I ACTGG 5 cut(s) 212, 317, 410, 1533, 1776
Bse3DI GCAATG 2 cut(s) 181, 1362
BseBI CCWGG 4 cut(s) 156, 432, 673, 695
BseGI GGATG 3 cut(s) 689, 1211, 1617
BseLI CCNNNNNNNGG 5 cut(s) 80, 593, 1144, 1561, 1771
BseMI GCAATG 2 cut(s) 181, 1362
BseNI ACTGG 5 cut(s) 212, 317, 410, 1533, 1776
BseRI GAGGAG 2 cut(s) 40, 1692
BseXI GCAGC 5 cut(s) 16, 189, 709, 712, 740
BseYI CCCAGC 1 cut(s) 94
BshFI GGCC 4 cut(s) 93, 429, 879, 1298
BshNI GGYRCC 2 cut(s) 641, 1626
BsiHKAI GWGCWC 2 cut(s) 811, 1066
BsiHKCI CYCGRG 1 cut(s) 1442
BsiSI CCGG 1 cut(s) 1631
BslFI GGGAC 2 cut(s) 398, 977
BslI CCNNNNNNNGG 5 cut(s) 80, 593, 1144, 1561, 1771
BsmAI GTCTC 2 cut(s) 1585, 1613
BsmFI GGGAC 2 cut(s) 398, 977
BsmI GAATGC 1 cut(s) 668
BsnI GGCC 4 cut(s) 93, 429, 879, 1298
Bso31I GGTCTC 1 cut(s) 1613
BsoBI CYCGRG 1 cut(s) 1442
Bsp119I TTCGAA 1 cut(s) 1549
Bsp1286I GDGCHC 2 cut(s) 811, 1066
Bsp1407I TGTACA 1 cut(s) 494
Bsp143I GATC 6 cut(s) 406, 1210, 1315, 1515, 1636, 1720
BspACI CCGC 1 cut(s) 307
BspANI GGCC 4 cut(s) 93, 429, 879, 1298
BspLI GGNNCC 4 cut(s) 408, 643, 886, 1628
BspMAI CTGCAG 1 cut(s) 730
BspMI ACCTGC 1 cut(s) 1756
BspPI GGATC 5 cut(s) 401, 414, 1323, 1523, 1715
BspT104I TTCGAA 1 cut(s) 1549
BspT107I GGYRCC 2 cut(s) 641, 1626
BspTNI GGTCTC 1 cut(s) 1613
BsrDI GCAATG 2 cut(s) 181, 1362
BsrGI TGTACA 1 cut(s) 494
BsrI ACTGG 5 cut(s) 212, 317, 410, 1533, 1776
BssMI GATC 6 cut(s) 406, 1210, 1315, 1515, 1636, 1720
BssT1I CCWWGG 5 cut(s) 61, 880, 1138, 1201, 1311
Bst2UI CCWGG 4 cut(s) 156, 432, 673, 695
Bst4CI ACNGT 1 cut(s) 898
Bst6I CTCTTC 1 cut(s) 966
BstAUI TGTACA 1 cut(s) 494
BstBI TTCGAA 1 cut(s) 1549
BstC8I GCNNGC 2 cut(s) 42, 131
BstF5I GGATG 3 cut(s) 689, 1211, 1617
BstHHI GCGC 1 cut(s) 689
BstKTI GATC 6 cut(s) 409, 1213, 1318, 1518, 1639, 1723
BstMAI GTCTC 2 cut(s) 1585, 1613
BstMBI GATC 6 cut(s) 406, 1210, 1315, 1515, 1636, 1720
BstMWI GCNNNNNNNGC 3 cut(s) 426, 728, 1583
BstNI CCWGG 4 cut(s) 156, 432, 673, 695
BstSCI CCNGG 5 cut(s) 154, 430, 671, 693, 1629
BstSFI CTRYAG 4 cut(s) 726, 742, 1338, 1725
BstV1I GCAGC 5 cut(s) 16, 189, 709, 712, 740
BstV2I GAAGAC 1 cut(s) 1548
BstX2I RGATCY 3 cut(s) 406, 1515, 1720
BstYI RGATCY 3 cut(s) 406, 1515, 1720
BsuI GTATCC 3 cut(s) 162, 178, 1411
BsuRI GGCC 4 cut(s) 93, 429, 879, 1298
BtsCI GGATG 3 cut(s) 689, 1211, 1617
BtsI GCAGTG 1 cut(s) 1094
BtsIMutI CAGTG 1 cut(s) 1094
BveI ACCTGC 1 cut(s) 1756
Cac8I GCNNGC 2 cut(s) 42, 131
CfoI GCGC 1 cut(s) 689
Cfr13I GGNCC 2 cut(s) 92, 428
Csp6I GTAC 6 cut(s) 397, 495, 954, 1360, 1436, 1743
CviAII CATG 4 cut(s) 89, 737, 1013, 1556
CviQI GTAC 6 cut(s) 397, 495, 954, 1360, 1436, 1743
DpnI GATC 6 cut(s) 408, 1212, 1317, 1517, 1638, 1722
DpnII GATC 6 cut(s) 406, 1210, 1315, 1515, 1636, 1720
EaeI YGGCCR 1 cut(s) 1296
Eam1104I CTCTTC 1 cut(s) 966
EarI CTCTTC 1 cut(s) 966
Ecl136II GAGCTC 2 cut(s) 809, 1064
Eco130I CCWWGG 5 cut(s) 61, 880, 1138, 1201, 1311
Eco24I GRGCYC 2 cut(s) 811, 1066
Eco31I GGTCTC 1 cut(s) 1613
Eco32I GATATC 2 cut(s) 841, 1234
Eco53kI GAGCTC 2 cut(s) 809, 1064
Eco57I CTGAAG 3 cut(s) 363, 1392, 1515
Eco88I CYCGRG 1 cut(s) 1442
EcoICRI GAGCTC 2 cut(s) 809, 1064
EcoRII CCWGG 4 cut(s) 154, 430, 671, 693
EcoRV GATATC 2 cut(s) 841, 1234
EcoT14I CCWWGG 5 cut(s) 61, 880, 1138, 1201, 1311
EcoT38I GRGCYC 2 cut(s) 811, 1066
ErhI CCWWGG 5 cut(s) 61, 880, 1138, 1201, 1311
FaeI CATG 4 cut(s) 92, 740, 1016, 1559
FaqI GGGAC 2 cut(s) 398, 977
FatI CATG 4 cut(s) 88, 736, 1012, 1555
Fnu4HI GCNGC 5 cut(s) 5, 203, 723, 726, 729
FokI GGATG 3 cut(s) 676, 1218, 1604
FriOI GRGCYC 2 cut(s) 811, 1066
Fsp4HI GCNGC 5 cut(s) 5, 203, 723, 726, 729
FspBI CTAG 3 cut(s) 518, 1169, 1344
GlaI GCGC 1 cut(s) 688
GluI GCNGC 5 cut(s) 5, 203, 723, 726, 729
GsaI CCCAGC 1 cut(s) 98
GsuI CTGGAG 1 cut(s) 1366
HaeIII GGCC 4 cut(s) 93, 429, 879, 1298
HapII CCGG 1 cut(s) 1631
HhaI GCGC 1 cut(s) 689
Hin1II CATG 4 cut(s) 92, 740, 1016, 1559
Hin6I GCGC 1 cut(s) 687
HinP1I GCGC 1 cut(s) 687
HindIII AAGCTT 1 cut(s) 911
HinfI GANTC 5 cut(s) 247, 769, 1038, 1218, 1551
HpaII CCGG 1 cut(s) 1631
HphI GGTGA 4 cut(s) 77, 301, 1261, 1550
Hpy166II GTNNAC 4 cut(s) 596, 1094, 1501, 1745
Hpy188I TCNGA 7 cut(s) 583, 751, 922, 1285, 1320, 1414, 1665
Hpy188III TCNNGA 6 cut(s) 197, 631, 844, 1383, 1444, 1718
Hpy8I GTNNAC 4 cut(s) 596, 1094, 1501, 1745
HpyAV CCTTC 8 cut(s) 677, 677, 1529, 1556, 1562, 1653, 1667, 1775
HpyCH4III ACNGT 1 cut(s) 898
HpyF10VI GCNNNNNNNGC 3 cut(s) 426, 728, 1583
Hsp92II CATG 4 cut(s) 92, 740, 1016, 1559
HspAI GCGC 1 cut(s) 687
Kzo9I GATC 6 cut(s) 406, 1210, 1315, 1515, 1636, 1720
LmnI GCTCC 1 cut(s) 884
Lsp1109I GCAGC 5 cut(s) 16, 189, 709, 712, 740
LweI GCATC 5 cut(s) 492, 698, 1196, 1564, 1626
MaeI CTAG 3 cut(s) 518, 1169, 1344
MalI GATC 6 cut(s) 408, 1212, 1317, 1517, 1638, 1722
MboI GATC 6 cut(s) 406, 1210, 1315, 1515, 1636, 1720
MfeI CAATTG 2 cut(s) 370, 1779
MflI RGATCY 3 cut(s) 406, 1515, 1720
MhlI GDGCHC 2 cut(s) 811, 1066
MlsI TGGCCA 1 cut(s) 1298
MluNI TGGCCA 1 cut(s) 1298
MmeI TCCRAC 4 cut(s) 575, 581, 1015, 1650
Mox20I TGGCCA 1 cut(s) 1298
MroXI GAANNNNTTC 4 cut(s) 192, 666, 913, 1545
MscI TGGCCA 1 cut(s) 1298
MseI TTAA 4 cut(s) 216, 423, 1688, 1760
MslI CAYNNNNRTG 1 cut(s) 1017
Msp20I TGGCCA 1 cut(s) 1298
MspA1I CMGCKG 1 cut(s) 383
MspI CCGG 1 cut(s) 1631
MspR9I CCNGG 5 cut(s) 156, 432, 673, 695, 1631
MunI CAATTG 2 cut(s) 370, 1779
Mva1269I GAATGC 1 cut(s) 668
MvaI CCWGG 4 cut(s) 156, 432, 673, 695
MwoI GCNNNNNNNGC 3 cut(s) 426, 728, 1583
NciI CCSGG 1 cut(s) 1631
NdeII GATC 6 cut(s) 406, 1210, 1315, 1515, 1636, 1720
NlaIII CATG 4 cut(s) 92, 740, 1016, 1559
NlaIV GGNNCC 4 cut(s) 408, 643, 886, 1628
NspV TTCGAA 1 cut(s) 1549
PaeR7I CTCGAG 1 cut(s) 1442
PaqCI CACCTGC 1 cut(s) 1756
PasI CCCWGGG 1 cut(s) 694
PctI GAATGC 1 cut(s) 668
PdmI GAANNNNTTC 4 cut(s) 192, 666, 913, 1545
PfeI GAWTC 5 cut(s) 247, 769, 1038, 1218, 1551
PflMI CCANNNNNTGG 1 cut(s) 593
PkrI GCNGC 5 cut(s) 6, 204, 724, 727, 730
PsiI TTATAA 1 cut(s) 903
Psp124BI GAGCTC 2 cut(s) 811, 1066
Psp6I CCWGG 4 cut(s) 154, 430, 671, 693
PspFI CCCAGC 1 cut(s) 94
PspGI CCWGG 4 cut(s) 154, 430, 671, 693
PspN4I GGNNCC 4 cut(s) 408, 643, 886, 1628
PspPI GGNCC 2 cut(s) 92, 428
PstI CTGCAG 1 cut(s) 730
PsuI RGATCY 3 cut(s) 406, 1515, 1720
PvuII CAGCTG 1 cut(s) 383
RsaI GTAC 6 cut(s) 398, 496, 955, 1361, 1437, 1744
RsaNI GTAC 6 cut(s) 397, 495, 954, 1360, 1436, 1743
RseI CAYNNNNRTG 1 cut(s) 1017
SacI GAGCTC 2 cut(s) 811, 1066
SaqAI TTAA 4 cut(s) 216, 423, 1688, 1760
SatI GCNGC 5 cut(s) 5, 203, 723, 726, 729
Sau3AI GATC 6 cut(s) 406, 1210, 1315, 1515, 1636, 1720
Sau96I GGNCC 2 cut(s) 92, 428
ScrFI CCNGG 5 cut(s) 156, 432, 673, 695, 1631
SduI GDGCHC 2 cut(s) 811, 1066
SfaNI GCATC 5 cut(s) 492, 698, 1196, 1564, 1626
SfcI CTRYAG 4 cut(s) 726, 742, 1338, 1725
Sfr274I CTCGAG 1 cut(s) 1442
SfuI TTCGAA 1 cut(s) 1549
SlaI CTCGAG 1 cut(s) 1442
SmiMI CAYNNNNRTG 1 cut(s) 1017
SmlI CTYRAG 3 cut(s) 197, 1442, 1716
SmoI CTYRAG 3 cut(s) 197, 1442, 1716
SpeI ACTAGT 1 cut(s) 517
SsiI CCGC 1 cut(s) 307
SspMI CTAG 3 cut(s) 518, 1169, 1344
SstI GAGCTC 2 cut(s) 811, 1066
StyD4I CCNGG 5 cut(s) 154, 430, 671, 693, 1629
StyI CCWWGG 5 cut(s) 61, 880, 1138, 1201, 1311
TaaI ACNGT 1 cut(s) 898
TaqI TCGA 4 cut(s) 471, 1230, 1443, 1549
TaqII GACCGA 1 cut(s) 1595
TatI WGTACW 3 cut(s) 494, 953, 1742
TfiI GAWTC 5 cut(s) 247, 769, 1038, 1218, 1551
Tru1I TTAA 4 cut(s) 216, 423, 1688, 1760
Tru9I TTAA 4 cut(s) 216, 423, 1688, 1760
TscAI CASTG 1 cut(s) 1101
TseI GCWGC 5 cut(s) 4, 202, 722, 725, 728
TspDTI ATGAA 8 cut(s) 22, 192, 669, 690, 999, 1096, 1101, 1664
TspRI CASTG 1 cut(s) 1101
Van91I CCANNNNNTGG 1 cut(s) 593
XapI RAATTY 4 cut(s) 104, 142, 218, 786
XcmI CCANNNNNNNNNTGG 1 cut(s) 887
XhoI CTCGAG 1 cut(s) 1442
XmnI GAANNNNTTC 4 cut(s) 192, 666, 913, 1545
XspI CTAG 3 cut(s) 518, 1169, 1344
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.