RLG00000029614

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
41187410 .. 41188851
1442 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029614

Sequence Viewer

Length: 399 bp
ATGATTGAAGTTTCTGTGATGAATGTTGATTCAACTTTCAAGGAGATGGAGTTCTATGAGTTGTGTGAAGAGGATTATGCGAAGGAGAAATCCAGTGAACAATCAGCAAAAAAGGCTGCTGCTTGTAAGGCAAAAAAATCGAAGCTGGCTGAGAAGTCAGAAGGAGGACAAGACTCGCAAATGGATATTGGAATGGATATTAGGGAAGAAGGATCAGATTCTACAATTGCAAAAGAATTAGCGATTGTGGGACTTTGGTGCATACAATGGCATCCGGTGGATCGTCCATCCATGAAAGTAGTGGTTCATATGTTGAAAGGAAGAGAAAACTTAGGTATGCCGCCTAATCCTTTTGGCTCTACAGGTCTACAGGAACAAATGGAAGTCTCCCAGCTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

133

Amino Acids

14.72

Weight (kDa)

4.89

Isoelectric Point (pI)

57.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 367
AciI CCGC 1 cut(s) 341
AclWI GGATC 2 cut(s) 220, 288
AgsI TTSAA 4 cut(s) 8, 33, 40, 316
AloI GAACNNNNNNTCC 2 cut(s) 35, 67
AluBI AGCT 2 cut(s) 145, 394
AluI AGCT 2 cut(s) 145, 394
Alw26I GTCTC 1 cut(s) 391
AlwI GGATC 2 cut(s) 220, 288
ApeKI GCWGC 2 cut(s) 116, 119
BbvI GCAGC 2 cut(s) 103, 106
BccI CCATC 2 cut(s) 40, 295
BcgI CGANNNNNNTGC 2 cut(s) 120, 154
BcoDI GTCTC 1 cut(s) 391
BfmI CTRYAG 2 cut(s) 360, 368
BisI GCNGC 3 cut(s) 117, 120, 341
BlsI GCNGC 3 cut(s) 118, 121, 342
BmsI GCATC 1 cut(s) 280
BsaWI WCCGGW 1 cut(s) 274
BsaXI ACNNNNNCTCC 2 cut(s) 35, 65
Bse1I ACTGG 1 cut(s) 93
BseGI GGATG 2 cut(s) 271, 287
BseMII CTCAG 1 cut(s) 141
BseNI ACTGG 1 cut(s) 93
BseXI GCAGC 2 cut(s) 103, 106
BseYI CCCAGC 1 cut(s) 390
BsiSI CCGG 1 cut(s) 275
BslFI GGGAC 1 cut(s) 264
BsmAI GTCTC 1 cut(s) 391
BsmFI GGGAC 1 cut(s) 264
Bsp143I GATC 2 cut(s) 212, 280
BspACI CCGC 1 cut(s) 341
BspCNI CTCAG 1 cut(s) 142
BspPI GGATC 2 cut(s) 220, 288
BsrI ACTGG 1 cut(s) 93
BssMI GATC 2 cut(s) 212, 280
Bst6I CTCTTC 2 cut(s) 63, 316
BstC8I GCNNGC 1 cut(s) 147
BstDEI CTNAG 2 cut(s) 150, 331
BstF5I GGATG 2 cut(s) 271, 287
BstKTI GATC 2 cut(s) 215, 283
BstMAI GTCTC 1 cut(s) 391
BstMBI GATC 2 cut(s) 212, 280
BstMWI GCNNNNNNNGC 2 cut(s) 113, 128
BstSFI CTRYAG 2 cut(s) 360, 368
BstV1I GCAGC 2 cut(s) 103, 106
BtsCI GGATG 2 cut(s) 271, 287
BtsIMutI CAGTG 1 cut(s) 100
Cac8I GCNNGC 1 cut(s) 147
CviAII CATG 1 cut(s) 292
CviJI RGCY 5 cut(s) 116, 145, 149, 357, 394
CviKI_1 RGCY 5 cut(s) 116, 145, 149, 357, 394
DdeI CTNAG 2 cut(s) 150, 331
DpnI GATC 2 cut(s) 214, 282
DpnII GATC 2 cut(s) 212, 280
Eam1104I CTCTTC 2 cut(s) 63, 316
EarI CTCTTC 2 cut(s) 63, 316
FaeI CATG 1 cut(s) 295
FaiI YATR 7 cut(s) 57, 78, 263, 293, 309, 311, 338
FaqI GGGAC 1 cut(s) 264
FatI CATG 1 cut(s) 291
FauNDI CATATG 1 cut(s) 309
FblI GTMKAC 1 cut(s) 367
Fnu4HI GCNGC 3 cut(s) 117, 120, 341
FokI GGATG 2 cut(s) 258, 274
Fsp4HI GCNGC 3 cut(s) 117, 120, 341
GluI GCNGC 3 cut(s) 117, 120, 341
GsaI CCCAGC 1 cut(s) 394
HapII CCGG 1 cut(s) 275
Hin1II CATG 1 cut(s) 295
HinfI GANTC 3 cut(s) 29, 173, 218
HpaII CCGG 1 cut(s) 275
Hpy166II GTNNAC 2 cut(s) 98, 368
Hpy188I TCNGA 2 cut(s) 160, 217
Hpy8I GTNNAC 2 cut(s) 98, 368
HpyAV CCTTC 3 cut(s) 76, 155, 203
HpyCH4V TGCA 2 cut(s) 230, 261
HpyF10VI GCNNNNNNNGC 2 cut(s) 113, 128
HpyF3I CTNAG 2 cut(s) 150, 331
Hsp92II CATG 1 cut(s) 295
Kzo9I GATC 2 cut(s) 212, 280
LpnPI CCDG 5 cut(s) 106, 131, 288, 348, 356
Lsp1109I GCAGC 2 cut(s) 103, 106
LweI GCATC 1 cut(s) 280
MalI GATC 2 cut(s) 214, 282
MboI GATC 2 cut(s) 212, 280
MboII GAAGA 3 cut(s) 80, 218, 333
MfeI CAATTG 1 cut(s) 225
MluCI AATT 2 cut(s) 225, 236
MlyI GAGTC 1 cut(s) 167
MnlI CCTC 2 cut(s) 64, 158
MspI CCGG 1 cut(s) 275
MunI CAATTG 1 cut(s) 225
MwoI GCNNNNNNNGC 2 cut(s) 113, 128
NdeI CATATG 1 cut(s) 309
NdeII GATC 2 cut(s) 212, 280
NlaIII CATG 1 cut(s) 295
PfeI GAWTC 2 cut(s) 29, 218
PkrI GCNGC 3 cut(s) 118, 121, 342
PleI GAGTC 1 cut(s) 167
PpsI GAGTC 1 cut(s) 167
PspFI CCCAGC 1 cut(s) 390
SatI GCNGC 3 cut(s) 117, 120, 341
Sau3AI GATC 2 cut(s) 212, 280
SchI GAGTC 1 cut(s) 167
SetI ASST 4 cut(s) 147, 337, 367, 396
SfaNI GCATC 1 cut(s) 280
SfcI CTRYAG 2 cut(s) 360, 368
Sse9I AATT 2 cut(s) 225, 236
SsiI CCGC 1 cut(s) 341
TaqI TCGA 1 cut(s) 140
TasI AATT 2 cut(s) 225, 236
TauI GCSGC 1 cut(s) 343
TfiI GAWTC 2 cut(s) 29, 218
TscAI CASTG 1 cut(s) 100
TseI GCWGC 2 cut(s) 116, 119
TspDTI ATGAA 3 cut(s) 35, 296, 308
TspRI CASTG 1 cut(s) 100
XcmI CCANNNNNNNNNTGG 1 cut(s) 298
XmiI GTMKAC 1 cut(s) 367
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.