Rw1G007220

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Forward (+)
15199180 .. 15202171
2992 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G007220.1

Sequence Viewer

Length: 612 bp
ATGGATCCAGTCCCCTGCTTTAATGGCCCTGGCTACCAAATCTACTCGGTTTCTTCTTCCCAAAGCATTGAGTACTTGCCCCTCCTGTCTTGTACAAAGATGCGTAATCTTTCACTAGTTCCATACAGCCCCGACCCGTATGCACCTCCAACTCCAACAAATCTTTATTTGGAATGGTCTGAACCAAATTGTGGACAATGTGAAGCAAATGGCACGATATGTGATTTCAAGAAGAATGGCACCACAAGTACTGAAATTGAATGCCTTCCCAGGAAGAAAGAAGGTTCAAAACCAAAGCTAGTACCCACTGGCGCACCCCTGGGTTCATTTGTAATCATACTAGTTGCTGCTGCAGGTTATCATGTCTATAGTTCTGACAGAAAAGAAAAACAGAATCAATTAAAAATTGAAAATTTTTTAGAGGATTACAGAGCTCTCAAACCAAGTAGATACTCTTATGCAGATATCAAGAGGATTACAAATCAGTTCAAGGACAAATTAGGCCAAGGAGCCTATGGAACTGTTTATAAGGGAAAGCTTTCTTCTGAATGTTTTGTTGCTGTCAAAGTCCTCAATAGTACAAAGGGGGATGGGGGAAGAGTTTGTAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

203

Amino Acids

22.42

Weight (kDa)

8.91

Isoelectric Point (pI)

38.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 528
Acc36I ACCTGC 1 cut(s) 344
AccB1I GGYRCC 1 cut(s) 239
AccB7I CCANNNNNTGG 1 cut(s) 191
AclWI GGATC 1 cut(s) 12
AcsI RAATTY 1 cut(s) 412
AfaI GTAC 5 cut(s) 74, 94, 250, 303, 580
AfiI CCNNNNNNNGG 1 cut(s) 191
AgsI TTSAA 5 cut(s) 229, 260, 288, 410, 490
AhlI ACTAGT 2 cut(s) 115, 340
AjnI CCWGG 3 cut(s) 28, 269, 318
AluBI AGCT 3 cut(s) 298, 434, 538
AluI AGCT 3 cut(s) 298, 434, 538
Alw21I GWGCWC 1 cut(s) 436
AlwI GGATC 1 cut(s) 12
AoxI GGCC 2 cut(s) 25, 502
ApeKI GCWGC 2 cut(s) 347, 350
ApoI RAATTY 1 cut(s) 412
Asp700I GAANNNNTTC 2 cut(s) 264, 538
AspLEI GCGC 1 cut(s) 314
AspS9I GGNCC 1 cut(s) 26
BamHI GGATCC 1 cut(s) 4
BanI GGYRCC 1 cut(s) 239
BanII GRGCYC 1 cut(s) 436
Bbv12I GWGCWC 1 cut(s) 436
BbvI GCAGC 2 cut(s) 334, 337
BccI CCATC 1 cut(s) 584
BcgI CGANNNNNNTGC 2 cut(s) 122, 156
BciT130I CCWGG 3 cut(s) 30, 271, 320
BcuI ACTAGT 2 cut(s) 115, 340
BfaI CTAG 3 cut(s) 116, 299, 341
BfmI CTRYAG 2 cut(s) 351, 367
BfuAI ACCTGC 1 cut(s) 344
BisI GCNGC 2 cut(s) 348, 351
BlsI GCNGC 2 cut(s) 349, 352
BmcAI AGTACT 2 cut(s) 74, 250
Bme1390I CCNGG 3 cut(s) 30, 271, 320
BmgT120I GGNCC 1 cut(s) 26
BmiI GGNNCC 3 cut(s) 6, 241, 511
BmrFI CCNGG 3 cut(s) 30, 271, 320
BmsI GCATC 1 cut(s) 90
BsaJI CCNNGG 5 cut(s) 28, 269, 318, 319, 505
Bsc4I CCNNNNNNNGG 1 cut(s) 191
Bse1I ACTGG 2 cut(s) 8, 313
BseBI CCWGG 3 cut(s) 30, 271, 320
BseDI CCNNGG 5 cut(s) 28, 269, 318, 319, 505
BseGI GGATG 1 cut(s) 595
BseLI CCNNNNNNNGG 1 cut(s) 191
BseNI ACTGG 2 cut(s) 8, 313
BseXI GCAGC 2 cut(s) 334, 337
BshFI GGCC 2 cut(s) 27, 504
BshNI GGYRCC 1 cut(s) 239
BsiHKAI GWGCWC 1 cut(s) 436
BslI CCNNNNNNNGG 1 cut(s) 191
BsmI GAATGC 1 cut(s) 266
BsnI GGCC 2 cut(s) 27, 504
Bsp1286I GDGCHC 1 cut(s) 436
Bsp1407I TGTACA 1 cut(s) 92
Bsp143I GATC 1 cut(s) 4
BspANI GGCC 2 cut(s) 27, 504
BspLI GGNNCC 3 cut(s) 6, 241, 511
BspMAI CTGCAG 1 cut(s) 355
BspMI ACCTGC 1 cut(s) 344
BspPI GGATC 1 cut(s) 12
BspT107I GGYRCC 1 cut(s) 239
BsrGI TGTACA 1 cut(s) 92
BsrI ACTGG 2 cut(s) 8, 313
BssECI CCNNGG 5 cut(s) 28, 269, 318, 319, 505
BssMI GATC 1 cut(s) 4
BssT1I CCWWGG 1 cut(s) 505
Bst2UI CCWGG 3 cut(s) 30, 271, 320
Bst4CI ACNGT 1 cut(s) 523
Bst6I CTCTTC 1 cut(s) 592
BstAUI TGTACA 1 cut(s) 92
BstF5I GGATG 1 cut(s) 595
BstHHI GCGC 1 cut(s) 314
BstKTI GATC 1 cut(s) 7
BstMBI GATC 1 cut(s) 4
BstMWI GCNNNNNNNGC 1 cut(s) 24
BstNI CCWGG 3 cut(s) 30, 271, 320
BstSCI CCNGG 3 cut(s) 28, 269, 318
BstSFI CTRYAG 2 cut(s) 351, 367
BstV1I GCAGC 2 cut(s) 334, 337
BstX2I RGATCY 1 cut(s) 4
BstYI RGATCY 1 cut(s) 4
BsuRI GGCC 2 cut(s) 27, 504
BtsCI GGATG 1 cut(s) 595
BtsIMutI CAGTG 1 cut(s) 306
BveI ACCTGC 1 cut(s) 344
CfoI GCGC 1 cut(s) 314
Cfr13I GGNCC 1 cut(s) 26
Csp6I GTAC 5 cut(s) 73, 93, 249, 302, 579
CviAII CATG 1 cut(s) 362
CviJI RGCY 8 cut(s) 27, 33, 129, 298, 434, 504, 512, 538
CviKI_1 RGCY 8 cut(s) 27, 33, 129, 298, 434, 504, 512, 538
CviQI GTAC 5 cut(s) 73, 93, 249, 302, 579
DpnI GATC 1 cut(s) 6
DpnII GATC 1 cut(s) 4
Eam1104I CTCTTC 1 cut(s) 592
EarI CTCTTC 1 cut(s) 592
Ecl136II GAGCTC 1 cut(s) 434
Eco130I CCWWGG 1 cut(s) 505
Eco24I GRGCYC 1 cut(s) 436
Eco32I GATATC 1 cut(s) 466
Eco53kI GAGCTC 1 cut(s) 434
EcoICRI GAGCTC 1 cut(s) 434
EcoRII CCWGG 3 cut(s) 28, 269, 318
EcoRV GATATC 1 cut(s) 466
EcoT14I CCWWGG 1 cut(s) 505
EcoT38I GRGCYC 1 cut(s) 436
ErhI CCWWGG 1 cut(s) 505
FaeI CATG 1 cut(s) 365
FaiI YATR 9 cut(s) 124, 141, 220, 338, 363, 369, 459, 516, 528
FatI CATG 1 cut(s) 361
Fnu4HI GCNGC 2 cut(s) 348, 351
FokI GGATG 1 cut(s) 602
FriOI GRGCYC 1 cut(s) 436
Fsp4HI GCNGC 2 cut(s) 348, 351
FspBI CTAG 3 cut(s) 116, 299, 341
GlaI GCGC 1 cut(s) 313
GluI GCNGC 2 cut(s) 348, 351
HaeIII GGCC 2 cut(s) 27, 504
HhaI GCGC 1 cut(s) 314
Hin1II CATG 1 cut(s) 365
Hin6I GCGC 1 cut(s) 312
HinP1I GCGC 1 cut(s) 312
HindIII AAGCTT 1 cut(s) 536
HinfI GANTC 1 cut(s) 394
Hpy166II GTNNAC 1 cut(s) 194
Hpy188I TCNGA 3 cut(s) 181, 376, 547
Hpy188III TCNNGA 2 cut(s) 229, 469
Hpy8I GTNNAC 1 cut(s) 194
HpyAV CCTTC 2 cut(s) 275, 275
HpyCH4III ACNGT 1 cut(s) 523
HpyCH4V TGCA 3 cut(s) 143, 353, 461
HpyF10VI GCNNNNNNNGC 1 cut(s) 24
Hsp92II CATG 1 cut(s) 365
HspAI GCGC 1 cut(s) 312
Kzo9I GATC 1 cut(s) 4
LmnI GCTCC 1 cut(s) 509
Lsp1109I GCAGC 2 cut(s) 334, 337
LweI GCATC 1 cut(s) 90
MaeI CTAG 3 cut(s) 116, 299, 341
MalI GATC 1 cut(s) 6
MboI GATC 1 cut(s) 4
MboII GAAGA 6 cut(s) 45, 48, 244, 286, 534, 609
MflI RGATCY 1 cut(s) 4
MhlI GDGCHC 1 cut(s) 436
MluCI AATT 6 cut(s) 187, 255, 398, 405, 412, 497
MmeI TCCRAC 2 cut(s) 173, 179
MnlI CCTC 5 cut(s) 92, 156, 415, 465, 581
MroXI GAANNNNTTC 2 cut(s) 264, 538
MseI TTAA 2 cut(s) 21, 401
MspR9I CCNGG 3 cut(s) 30, 271, 320
Mva1269I GAATGC 1 cut(s) 266
MvaI CCWGG 3 cut(s) 30, 271, 320
MwoI GCNNNNNNNGC 1 cut(s) 24
NdeII GATC 1 cut(s) 4
NlaIII CATG 1 cut(s) 365
NlaIV GGNNCC 3 cut(s) 6, 241, 511
PasI CCCWGGG 1 cut(s) 319
PctI GAATGC 1 cut(s) 266
PdmI GAANNNNTTC 2 cut(s) 264, 538
PfeI GAWTC 1 cut(s) 394
PflMI CCANNNNNTGG 1 cut(s) 191
PkrI GCNGC 2 cut(s) 349, 352
PsiI TTATAA 1 cut(s) 528
Psp124BI GAGCTC 1 cut(s) 436
Psp6I CCWGG 3 cut(s) 28, 269, 318
PspGI CCWGG 3 cut(s) 28, 269, 318
PspN4I GGNNCC 3 cut(s) 6, 241, 511
PspPI GGNCC 1 cut(s) 26
PstI CTGCAG 1 cut(s) 355
PsuI RGATCY 1 cut(s) 4
RsaI GTAC 5 cut(s) 74, 94, 250, 303, 580
RsaNI GTAC 5 cut(s) 73, 93, 249, 302, 579
SacI GAGCTC 1 cut(s) 436
SaqAI TTAA 2 cut(s) 21, 401
SatI GCNGC 2 cut(s) 348, 351
Sau3AI GATC 1 cut(s) 4
Sau96I GGNCC 1 cut(s) 26
ScaI AGTACT 2 cut(s) 74, 250
ScrFI CCNGG 3 cut(s) 30, 271, 320
SduI GDGCHC 1 cut(s) 436
SetI ASST 6 cut(s) 148, 286, 300, 358, 436, 540
SfaNI GCATC 1 cut(s) 90
SfcI CTRYAG 2 cut(s) 351, 367
SpeI ACTAGT 2 cut(s) 115, 340
Sse9I AATT 6 cut(s) 187, 255, 398, 405, 412, 497
SspMI CTAG 3 cut(s) 116, 299, 341
SstI GAGCTC 1 cut(s) 436
StyD4I CCNGG 3 cut(s) 28, 269, 318
StyI CCWWGG 1 cut(s) 505
TaaI ACNGT 1 cut(s) 523
TasI AATT 6 cut(s) 187, 255, 398, 405, 412, 497
TatI WGTACW 4 cut(s) 72, 92, 248, 578
TfiI GAWTC 1 cut(s) 394
Tru1I TTAA 2 cut(s) 21, 401
Tru9I TTAA 2 cut(s) 21, 401
TscAI CASTG 1 cut(s) 313
TseI GCWGC 2 cut(s) 347, 350
TspDTI ATGAA 1 cut(s) 315
TspRI CASTG 1 cut(s) 313
Van91I CCANNNNNTGG 1 cut(s) 191
XapI RAATTY 1 cut(s) 412
XcmI CCANNNNNNNNNTGG 1 cut(s) 512
XmnI GAANNNNTTC 2 cut(s) 264, 538
XspI CTAG 3 cut(s) 116, 299, 341
ZrmI AGTACT 2 cut(s) 74, 250
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.