RLG00000029610

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
41096255 .. 41096698
444 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029610

Sequence Viewer

Length: 444 bp
ATGGGGTGCATCTCCAGGAACTTCAGAAATGTGTCCTATAAGTCAGATTTCTATAGTTATGGAATGGTACTGCTTGGGATGGTAGGAGGAAGAAAGAATATTGGTTCAACCACAGAGAACACCAGCAAAGTTTACTACCCAGAACGGATCTATAATCATCTGGAAGGAGATGACCTACCTACCCATATGGCTGAAGAAGGAGGTACTAAAATTGCAAAGAGACTTGCAATTGTAGGTCTCTGGTGCATCCAACGGCACCCTGTAGATCAGCCTTCCATGCAAGGGTTGGTTCACATGTTGGAAGGAGGAGAAAATCTAACCATGCCTTCAAATCCTTTTGCCTCTCAAGGTCCAGCAGGAACAAGTACAAGTACACTTCCGAGAAACTTAAACGTCCAACTAGAAGTAATTTTTGAGCAAGAACAGATTAATGAGAGTTTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

148

Amino Acids

16.31

Weight (kDa)

5.77

Isoelectric Point (pI)

43.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 255
AclWI GGATC 1 cut(s) 155
AcuI CTGAAG 2 cut(s) 7, 213
AfaI GTAC 4 cut(s) 69, 205, 367, 373
AfiI CCNNNNNNNGG 1 cut(s) 282
AflIII ACRYGT 1 cut(s) 294
AgsI TTSAA 2 cut(s) 108, 330
AjnI CCWGG 1 cut(s) 14
Alw26I GTCTC 2 cut(s) 214, 242
AlwI GGATC 1 cut(s) 155
AseI ATTAAT 1 cut(s) 429
AspS9I GGNCC 1 cut(s) 350
AvaII GGWCC 1 cut(s) 350
BanI GGYRCC 1 cut(s) 255
BccI CCATC 1 cut(s) 73
BceAI ACGGC 1 cut(s) 269
BciT130I CCWGG 1 cut(s) 16
BcoDI GTCTC 2 cut(s) 214, 242
BfaI CTAG 1 cut(s) 401
BfmI CTRYAG 2 cut(s) 52, 261
Bme1390I CCNGG 1 cut(s) 16
Bme18I GGWCC 1 cut(s) 350
BmgT120I GGNCC 1 cut(s) 350
BmiI GGNNCC 1 cut(s) 257
BmrFI CCNGG 1 cut(s) 16
BmsI GCATC 2 cut(s) 18, 255
BpuEI CTTGAG 1 cut(s) 330
BsaI GGTCTC 1 cut(s) 242
Bsc4I CCNNNNNNNGG 1 cut(s) 282
BseBI CCWGG 1 cut(s) 16
BseGI GGATG 2 cut(s) 84, 246
BseLI CCNNNNNNNGG 1 cut(s) 282
BseRI GAGGAG 1 cut(s) 321
BshNI GGYRCC 1 cut(s) 255
BslI CCNNNNNNNGG 1 cut(s) 282
BsmAI GTCTC 2 cut(s) 214, 242
Bso31I GGTCTC 1 cut(s) 242
Bsp143I GATC 2 cut(s) 147, 265
BspLI GGNNCC 1 cut(s) 257
BspPI GGATC 1 cut(s) 155
BspT107I GGYRCC 1 cut(s) 255
BspTNI GGTCTC 1 cut(s) 242
BssMI GATC 2 cut(s) 147, 265
Bst2UI CCWGG 1 cut(s) 16
BstF5I GGATG 2 cut(s) 84, 246
BstKTI GATC 2 cut(s) 150, 268
BstMAI GTCTC 2 cut(s) 214, 242
BstMBI GATC 2 cut(s) 147, 265
BstMWI GCNNNNNNNGC 1 cut(s) 277
BstNI CCWGG 1 cut(s) 16
BstNSI RCATGY 1 cut(s) 298
BstSCI CCNGG 1 cut(s) 14
BstSFI CTRYAG 2 cut(s) 52, 261
BstX2I RGATCY 1 cut(s) 147
BstYI RGATCY 1 cut(s) 147
BtsCI GGATG 2 cut(s) 84, 246
Cfr13I GGNCC 1 cut(s) 350
Csp6I GTAC 4 cut(s) 68, 204, 366, 372
CviAII CATG 3 cut(s) 277, 295, 322
CviJI RGCY 2 cut(s) 191, 271
CviKI_1 RGCY 2 cut(s) 191, 271
CviQI GTAC 4 cut(s) 68, 204, 366, 372
DpnI GATC 2 cut(s) 149, 267
DpnII GATC 2 cut(s) 147, 265
Eco31I GGTCTC 1 cut(s) 242
Eco47I GGWCC 1 cut(s) 350
Eco57I CTGAAG 2 cut(s) 7, 213
EcoRII CCWGG 1 cut(s) 14
FaeI CATG 3 cut(s) 280, 298, 325
FatI CATG 3 cut(s) 276, 294, 321
FauNDI CATATG 1 cut(s) 186
FokI GGATG 2 cut(s) 91, 233
FspBI CTAG 1 cut(s) 401
Hin1II CATG 3 cut(s) 280, 298, 325
Hpy166II GTNNAC 3 cut(s) 133, 292, 374
Hpy188I TCNGA 3 cut(s) 26, 46, 381
Hpy188III TCNNGA 1 cut(s) 161
Hpy8I GTNNAC 3 cut(s) 133, 292, 374
HpyAV CCTTC 5 cut(s) 158, 191, 282, 296, 336
HpyCH4IV ACGT 1 cut(s) 393
HpyCH4V TGCA 5 cut(s) 9, 215, 227, 246, 280
HpyF10VI GCNNNNNNNGC 1 cut(s) 277
HpySE526I ACGT 1 cut(s) 393
Hsp92II CATG 3 cut(s) 280, 298, 325
Kzo9I GATC 2 cut(s) 147, 265
LpnPI CCDG 8 cut(s) 28, 136, 146, 153, 226, 273, 342, 366
LweI GCATC 2 cut(s) 18, 255
MaeI CTAG 1 cut(s) 401
MaeII ACGT 1 cut(s) 393
MalI GATC 2 cut(s) 149, 267
MboI GATC 2 cut(s) 147, 265
MboII GAAGA 2 cut(s) 102, 206
MfeI CAATTG 1 cut(s) 228
MflI RGATCY 1 cut(s) 147
MluCI AATT 3 cut(s) 210, 228, 408
MmeI TCCRAC 3 cut(s) 274, 279, 421
MnlI CCTC 4 cut(s) 80, 194, 299, 352
MseI TTAA 2 cut(s) 389, 429
MspR9I CCNGG 1 cut(s) 16
MunI CAATTG 1 cut(s) 228
MvaI CCWGG 1 cut(s) 16
MwoI GCNNNNNNNGC 1 cut(s) 277
NdeI CATATG 1 cut(s) 186
NdeII GATC 2 cut(s) 147, 265
NlaIII CATG 3 cut(s) 280, 298, 325
NlaIV GGNNCC 1 cut(s) 257
NspI RCATGY 1 cut(s) 298
PciI ACATGT 1 cut(s) 294
PfoI TCCNGGA 1 cut(s) 14
PscI ACATGT 1 cut(s) 294
PshBI ATTAAT 1 cut(s) 429
Psp6I CCWGG 1 cut(s) 14
PspGI CCWGG 1 cut(s) 14
PspN4I GGNNCC 1 cut(s) 257
PspPI GGNCC 1 cut(s) 350
PsuI RGATCY 1 cut(s) 147
RsaI GTAC 4 cut(s) 69, 205, 367, 373
RsaNI GTAC 4 cut(s) 68, 204, 366, 372
SaqAI TTAA 2 cut(s) 389, 429
Sau3AI GATC 2 cut(s) 147, 265
Sau96I GGNCC 1 cut(s) 350
ScrFI CCNGG 1 cut(s) 16
SetI ASST 6 cut(s) 177, 181, 205, 238, 352, 396
SfaNI GCATC 2 cut(s) 18, 255
SfcI CTRYAG 2 cut(s) 52, 261
SinI GGWCC 1 cut(s) 350
SmlI CTYRAG 1 cut(s) 345
SmoI CTYRAG 1 cut(s) 345
Sse9I AATT 3 cut(s) 210, 228, 408
SspI AATATT 1 cut(s) 100
SspMI CTAG 1 cut(s) 401
StyD4I CCNGG 1 cut(s) 14
TaiI ACGT 1 cut(s) 396
TasI AATT 3 cut(s) 210, 228, 408
TatI WGTACW 2 cut(s) 365, 371
Tru1I TTAA 2 cut(s) 389, 429
Tru9I TTAA 2 cut(s) 389, 429
TspGWI ACGGA 1 cut(s) 160
VpaK11BI GGWCC 1 cut(s) 350
VspI ATTAAT 1 cut(s) 429
XceI RCATGY 1 cut(s) 298
XcmI CCANNNNNNNNNTGG 1 cut(s) 283
XspI CTAG 1 cut(s) 401
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.