Rh1AG099600

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0000107
Physical Location & Seq
Reverse (-)
17442154 .. 17444246
2093 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG099600.1

Sequence Viewer

Length: 1797 bp
ATGCAGCGACTAATCCTCATATCAGCCTATTGCATATTAATGTCAATGGCTTTCTTCAAGGTGTGCCATAATGCATGCACAGAATCAGAGTGTGGTGACCATGATGATCATCGCCTTGCTATTCATGTCCCGGTCAAGCGCGTCCATTGTCATGGTGGTTATTTTCTGCAGCAGAAAGAAAAGACGATTGTTGAGCAGAAGCAAATGGTAGTAAAATTCTTTGTGAAACACATAGATTATAAGCACCAGAAAATTCAAGTACATATTCCAGATGATTGCTTTCTCCTAAAGCAATTAGAAACCCCAAGCATGAAGCCAATGTTCTCTCCTTTGAACTTCTCAGAATATGATACGACCGAGTGCATCAGCTTATTCAACTGTCCCACAGCTAATTATCCGCACATGCAAGTCCCCTGCCTCAGTGACCTGGTATACAAAAATATCTATGCCGTTTCTTCATCGGTTCAAGCCCCACAGTACTGTACAAAGATGTATGATTTAATAAATCCATACAGACGTGTGTATCCAGATAACTATTTTTGGTGGTCTACACCAAATTGTACAGAATGTGAAGCGAAGCGTAAGAAGTGTCAATTGAAGATCAACGGCACCAAAAGTGAAATTGAATGTGTTCATTTTAGCAAACCAAGTGCAACAAAAACATTAGTGTCTACAGGTGCAACTGTGACTACAATCATTTTACTAATATCGGTGACTGTAGTCTATAGATCTCATAAAAAGGAAAAGGAGAATCAATTGAAAATTGAAACATTCCTAGAGGATTACAAAGCGCTCAAGCCAAGCAGATATTCCTACGCAGATATCAAAAGAATTACAAATCAATTTGAGGACAAGTTGGGCCAAGGAGCGTATGGAACTGTTTTCAAAGGGAAGCTTTCATCTGAAGTTTTTGTTGCTGTTAAAGTCCTCAACAATTCCGAAAACGGAGATGGGGAAGAATTCATCAATGAGGTGGGAACAATGGGTCATATCCACCATGTCAACGTGGTTCGCATGGTTGGCTTCTGTGCAGAAGGATTTAGACGAGCTCTTGTTTATGAGTTTTTCCCCAATGGGTCACTACAGGATTTCATTTCATCAGCAGACAATAAGAATTCTTTCCTTGGTTGGGATAAGTTAAAAGATATTTCTCTAGGCATTGCCAAAGGAATTGAATATCTACACCAAGGATGCGATCAACGAATTCTTCATTTTGATATCAAACCTCAAAATGTTTTGCTAGATCAAAACTTCACTCCAAAAATATCTGATTTTGGAATGTCCAAGTTGTGTGCCAAGGATCAAAGTATAGTGTCAATGACTATGGCTAGGGGGACTATAGGCTATATTGCACCTGAAGTGTTCTCCCGGAATTTTGGAAATGTGTCATATAAGTCAGATGTCTATAGTTTTGGAATGTTGTTGCTCGAGATTGTAGGAGGGAGGAAGAATATTGGTGAAACCATGGATAACACTGGGGAAGTATACTACCCAGAATGGATACATAATCTTTTAGATGAAGGGGAAGACCTTCGAGTCCATATTGGGGAAGAAGGATCGAGAATAGATTCTCGAATTCCAAAAGAATTAGCAATTGTAGGCCTTTGGTGTGTCCAATGGCACCCAATGAATCGTCCATCCATGAAATCAGTGGTTCAGATGTTGGGAGGAAGAGAAAACTTAACCATGCCACCTAATCCTTTTGCCTCTACAGGTCCTACAAGAACAAATGCAACAAGTTGCCCGGCTGCAAGACGCTTCAACCTCGACTTAGAAGCAATTGTTGAATTAGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase

Protein Analysis

598

Amino Acids

68.02

Weight (kDa)

7.25

Isoelectric Point (pI)

44.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 281 - 555 3.5e-46 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 282 - 553 1e-46 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 240
AasI GACNNNNNNGTC 1 cut(s) 1535
AccB1I GGYRCC 2 cut(s) 608, 1620
AccI GTMKAC 4 cut(s) 432, 548, 671, 1485
AccII CGCG 1 cut(s) 141
AciI CCGC 1 cut(s) 398
AclWI GGATC 2 cut(s) 1308, 1564
AcsI RAATTY 7 cut(s) 215, 252, 959, 1114, 1203, 1372, 1575
AcuI CTGAAG 2 cut(s) 924, 1377
AfaI GTAC 4 cut(s) 261, 479, 484, 562
AfeI AGCGCT 1 cut(s) 792
AfiI CCNNNNNNNGG 2 cut(s) 1129, 1546
AflIII ACRYGT 1 cut(s) 517
AjiI CACGTC 1 cut(s) 518
AjnI CCWGG 1 cut(s) 426
AjuI GAANNNNNNNTTGG 2 cut(s) 793, 825
AluBI AGCT 4 cut(s) 369, 389, 895, 1049
AluI AGCT 4 cut(s) 369, 389, 895, 1049
Alw21I GWGCWC 1 cut(s) 1051
AlwI GGATC 2 cut(s) 1308, 1564
Ama87I CYCGRG 1 cut(s) 1427
Aor51HI AGCGCT 1 cut(s) 792
AoxI GGCC 2 cut(s) 859, 1600
ApeKI GCWGC 3 cut(s) 4, 169, 1748
ApoI RAATTY 7 cut(s) 215, 252, 959, 1114, 1203, 1372, 1575
AseI ATTAAT 1 cut(s) 38
Asp700I GAANNNNTTC 4 cut(s) 630, 1118, 1530, 1567
AspLEI GCGC 2 cut(s) 141, 793
AspS9I GGNCC 2 cut(s) 859, 1715
AsuC2I CCSGG 3 cut(s) 131, 1369, 1745
AsuHPI GGTGA 3 cut(s) 107, 724, 1469
AvaI CYCGRG 1 cut(s) 1427
AvaII GGWCC 1 cut(s) 1715
BaeI ACNNNNGTAYC 2 cut(s) 506, 539
BanI GGYRCC 2 cut(s) 608, 1620
BanII GRGCYC 1 cut(s) 1051
BbsI GAAGAC 1 cut(s) 1533
Bbv12I GWGCWC 1 cut(s) 1051
BbvI GCAGC 3 cut(s) 16, 181, 1735
BccI CCATC 2 cut(s) 944, 1645
BceAI ACGGC 2 cut(s) 434, 622
BciT130I CCWGG 1 cut(s) 428
BciVI GTATCC 2 cut(s) 534, 1494
BclI TGATCA 1 cut(s) 106
BcnI CCSGG 3 cut(s) 131, 1369, 1745
BfaI CTAG 4 cut(s) 776, 1154, 1241, 1329
BfmI CTRYAG 8 cut(s) 167, 672, 717, 724, 1082, 1338, 1405, 1710
BfoI RGCGCY 1 cut(s) 794
BfuI GTATCC 2 cut(s) 534, 1494
BglII AGATCT 1 cut(s) 728
BisI GCNGC 3 cut(s) 5, 170, 1749
BlsI GCNGC 3 cut(s) 6, 171, 1750
BmcAI AGTACT 1 cut(s) 479
Bme1390I CCNGG 4 cut(s) 131, 428, 1369, 1745
Bme18I GGWCC 1 cut(s) 1715
BmeT110I CYCGRG 1 cut(s) 1427
BmgBI CACGTC 1 cut(s) 518
BmgT120I GGNCC 2 cut(s) 859, 1715
BmiI GGNNCC 2 cut(s) 610, 1622
BmrFI CCNGG 4 cut(s) 131, 428, 1369, 1745
BmrI ACTGGG 1 cut(s) 1485
BmsI GCATC 2 cut(s) 372, 1181
BmuI ACTGGG 1 cut(s) 1485
BoxI GACNNNNGTC 1 cut(s) 719
BpiI GAAGAC 1 cut(s) 1533
BpuEI CTTGAG 1 cut(s) 779
BpuMI CCSGG 3 cut(s) 131, 1369, 1745
BsaBI GATNNNNATC 1 cut(s) 108
BsaJI CCNNGG 5 cut(s) 862, 1123, 1186, 1296, 1464
Bsc4I CCNNNNNNNGG 2 cut(s) 1129, 1546
Bse1I ACTGG 1 cut(s) 1480
Bse3DI GCAATG 1 cut(s) 1158
Bse8I GATNNNNATC 1 cut(s) 108
BseBI CCWGG 1 cut(s) 428
BseDI CCNNGG 5 cut(s) 862, 1123, 1186, 1296, 1464
BseGI GGATG 2 cut(s) 1196, 1637
BseJI GATNNNNATC 1 cut(s) 108
BseLI CCNNNNNNNGG 2 cut(s) 1129, 1546
BseMI GCAATG 1 cut(s) 1158
BseMII CTCAG 2 cut(s) 354, 433
BseNI ACTGG 1 cut(s) 1480
BseXI GCAGC 3 cut(s) 16, 181, 1735
BsgI GTGCAG 1 cut(s) 1050
Bsh1236I CGCG 1 cut(s) 141
Bsh1285I CGRYCG 1 cut(s) 357
BshFI GGCC 2 cut(s) 861, 1602
BshNI GGYRCC 2 cut(s) 608, 1620
BsiEI CGRYCG 1 cut(s) 357
BsiHKAI GWGCWC 1 cut(s) 1051
BsiHKCI CYCGRG 1 cut(s) 1427
BsiSI CCGG 3 cut(s) 131, 1369, 1745
BslFI GGGAC 4 cut(s) 113, 366, 395, 1348
BslI CCNNNNNNNGG 2 cut(s) 1129, 1546
BsmFI GGGAC 4 cut(s) 113, 366, 395, 1348
BsnI GGCC 2 cut(s) 861, 1602
BsoBI CYCGRG 1 cut(s) 1427
Bsp1286I GDGCHC 1 cut(s) 1051
Bsp1407I TGTACA 2 cut(s) 482, 560
Bsp143I GATC 7 cut(s) 106, 600, 728, 1195, 1243, 1300, 1556
Bsp19I CCATGG 1 cut(s) 1464
BspACI CCGC 1 cut(s) 398
BspANI GGCC 2 cut(s) 861, 1602
BspCNI CTCAG 2 cut(s) 353, 432
BspFNI CGCG 1 cut(s) 141
BspLI GGNNCC 2 cut(s) 610, 1622
BspMAI CTGCAG 1 cut(s) 171
BspPI GGATC 2 cut(s) 1308, 1564
BspT107I GGYRCC 2 cut(s) 608, 1620
BsrDI GCAATG 1 cut(s) 1158
BsrGI TGTACA 2 cut(s) 482, 560
BsrI ACTGG 1 cut(s) 1480
BssECI CCNNGG 5 cut(s) 862, 1123, 1186, 1296, 1464
BssMI GATC 7 cut(s) 106, 600, 728, 1195, 1243, 1300, 1556
BssNAI GTATAC 2 cut(s) 433, 1486
BssT1I CCWWGG 5 cut(s) 862, 1123, 1186, 1296, 1464
Bst1107I GTATAC 2 cut(s) 433, 1486
Bst2UI CCWGG 1 cut(s) 428
Bst4CI ACNGT 6 cut(s) 380, 477, 482, 685, 718, 880
Bst6I CTCTTC 1 cut(s) 1666
BstAUI TGTACA 2 cut(s) 482, 560
BstC8I GCNNGC 1 cut(s) 76
BstDEI CTNAG 3 cut(s) 340, 419, 1771
BstDSI CCRYGG 1 cut(s) 1464
BstEII GGTNACC 1 cut(s) 95
BstF5I GGATG 2 cut(s) 1196, 1637
BstFNI CGCG 1 cut(s) 141
BstH2I RGCGCY 1 cut(s) 794
BstHHI GCGC 2 cut(s) 141, 793
BstKTI GATC 7 cut(s) 109, 603, 731, 1198, 1246, 1303, 1559
BstMBI GATC 7 cut(s) 106, 600, 728, 1195, 1243, 1300, 1556
BstMCI CGRYCG 1 cut(s) 357
BstMWI GCNNNNNNNGC 1 cut(s) 1020
BstNI CCWGG 1 cut(s) 428
BstNSI RCATGY 2 cut(s) 78, 406
BstPAI GACNNNNGTC 1 cut(s) 719
BstPI GGTNACC 1 cut(s) 95
BstSCI CCNGG 4 cut(s) 129, 426, 1367, 1743
BstSFI CTRYAG 8 cut(s) 167, 672, 717, 724, 1082, 1338, 1405, 1710
BstUI CGCG 1 cut(s) 141
BstV1I GCAGC 3 cut(s) 16, 181, 1735
BstV2I GAAGAC 1 cut(s) 1533
BstX2I RGATCY 1 cut(s) 728
BstXI CCANNNNNNTGG 1 cut(s) 152
BstYI RGATCY 1 cut(s) 728
BstZ17I GTATAC 2 cut(s) 433, 1486
BsuI GTATCC 2 cut(s) 534, 1494
BsuRI GGCC 2 cut(s) 861, 1602
BtgI CCRYGG 1 cut(s) 1464
BtgZI GCGATG 1 cut(s) 95
BtrI CACGTC 1 cut(s) 518
BtsCI GGATG 2 cut(s) 1196, 1637
BtsIMutI CAGTG 3 cut(s) 427, 1473, 1656
Cac8I GCNNGC 1 cut(s) 76
CfoI GCGC 2 cut(s) 141, 793
Cfr13I GGNCC 2 cut(s) 859, 1715
CseI GACGC 2 cut(s) 130, 1764
CsiI ACCWGGT 1 cut(s) 426
Csp6I GTAC 4 cut(s) 260, 478, 483, 561
CviQI GTAC 4 cut(s) 260, 478, 483, 561
DdeI CTNAG 3 cut(s) 340, 419, 1771
DpnI GATC 7 cut(s) 108, 602, 730, 1197, 1245, 1302, 1558
DpnII GATC 7 cut(s) 106, 600, 728, 1195, 1243, 1300, 1556
DrdI GACNNNNNNGTC 1 cut(s) 1535
DseDI GACNNNNNNGTC 1 cut(s) 1535
Eam1104I CTCTTC 1 cut(s) 1666
EarI CTCTTC 1 cut(s) 1666
Ecl136II GAGCTC 1 cut(s) 1049
Eco130I CCWWGG 5 cut(s) 862, 1123, 1186, 1296, 1464
Eco147I AGGCCT 1 cut(s) 1602
Eco24I GRGCYC 1 cut(s) 1051
Eco32I GATATC 2 cut(s) 823, 1219
Eco47I GGWCC 1 cut(s) 1715
Eco47III AGCGCT 1 cut(s) 792
Eco53kI GAGCTC 1 cut(s) 1049
Eco57I CTGAAG 2 cut(s) 924, 1377
Eco88I CYCGRG 1 cut(s) 1427
Eco91I GGTNACC 1 cut(s) 95
EcoICRI GAGCTC 1 cut(s) 1049
EcoO109I RGGNCCY 1 cut(s) 1715
EcoO65I GGTNACC 1 cut(s) 95
EcoRI GAATTC 4 cut(s) 959, 1114, 1203, 1575
EcoRII CCWGG 1 cut(s) 426
EcoRV GATATC 2 cut(s) 823, 1219
EcoT14I CCWWGG 5 cut(s) 862, 1123, 1186, 1296, 1464
EcoT22I ATGCAT 1 cut(s) 76
EcoT38I GRGCYC 1 cut(s) 1051
ErhI CCWWGG 5 cut(s) 862, 1123, 1186, 1296, 1464
FalI AAGNNNNNCTT 2 cut(s) 879, 911
FaqI GGGAC 4 cut(s) 113, 366, 395, 1348
FbaI TGATCA 1 cut(s) 106
FblI GTMKAC 4 cut(s) 432, 548, 671, 1485
Fnu4HI GCNGC 3 cut(s) 5, 170, 1749
FokI GGATG 2 cut(s) 1203, 1624
FriOI GRGCYC 1 cut(s) 1051
Fsp4HI GCNGC 3 cut(s) 5, 170, 1749
FspBI CTAG 4 cut(s) 776, 1154, 1241, 1329
GlaI GCGC 2 cut(s) 140, 792
GluI GCNGC 3 cut(s) 5, 170, 1749
HaeII RGCGCY 1 cut(s) 794
HaeIII GGCC 2 cut(s) 861, 1602
HapII CCGG 3 cut(s) 131, 1369, 1745
HgaI GACGC 2 cut(s) 130, 1764
HhaI GCGC 2 cut(s) 141, 793
Hin6I GCGC 2 cut(s) 139, 791
HinP1I GCGC 2 cut(s) 139, 791
HincII GTYRAC 1 cut(s) 1003
HindII GTYRAC 1 cut(s) 1003
HindIII AAGCTT 1 cut(s) 893
HinfI GANTC 5 cut(s) 83, 751, 1536, 1568, 1630
HpaII CCGG 3 cut(s) 131, 1369, 1745
HphI GGTGA 3 cut(s) 107, 724, 1469
Hpy166II GTNNAC 5 cut(s) 433, 549, 672, 1003, 1486
Hpy188I TCNGA 7 cut(s) 88, 343, 904, 940, 1270, 1399, 1659
Hpy188III TCNNGA 5 cut(s) 269, 527, 1429, 1560, 1572
Hpy8I GTNNAC 5 cut(s) 433, 549, 672, 1003, 1486
HpyAV CCTTC 4 cut(s) 1028, 1514, 1541, 1547
HpyCH4III ACNGT 6 cut(s) 380, 477, 482, 685, 718, 880
HpyCH4IV ACGT 2 cut(s) 517, 1005
HpyF10VI GCNNNNNNNGC 1 cut(s) 1020
HpyF3I CTNAG 3 cut(s) 340, 419, 1771
HpySE526I ACGT 2 cut(s) 517, 1005
HspAI GCGC 2 cut(s) 139, 791
Ksp22I TGATCA 1 cut(s) 106
Kzo9I GATC 7 cut(s) 106, 600, 728, 1195, 1243, 1300, 1556
LmnI GCTCC 1 cut(s) 866
Lsp1109I GCAGC 3 cut(s) 16, 181, 1735
LweI GCATC 2 cut(s) 372, 1181
MabI ACCWGGT 1 cut(s) 426
MaeI CTAG 4 cut(s) 776, 1154, 1241, 1329
MaeII ACGT 2 cut(s) 517, 1005
MaeIII GTNAC 5 cut(s) 95, 422, 685, 712, 1077
MalI GATC 7 cut(s) 108, 602, 730, 1197, 1245, 1302, 1558
MboI GATC 7 cut(s) 106, 600, 728, 1195, 1243, 1300, 1556
MboII GAAGA 9 cut(s) 46, 447, 610, 968, 1199, 1459, 1538, 1562, 1683
MfeI CAATTG 4 cut(s) 593, 755, 1593, 1779
MflI RGATCY 1 cut(s) 728
MhlI GDGCHC 1 cut(s) 1051
MlyI GAGTC 1 cut(s) 1545
Mph1103I ATGCAT 1 cut(s) 76
MroXI GAANNNNTTC 4 cut(s) 630, 1118, 1530, 1567
MseI TTAA 5 cut(s) 38, 500, 921, 1139, 1682
MslI CAYNNNNRTG 2 cut(s) 38, 150
MspI CCGG 3 cut(s) 131, 1369, 1745
MspR9I CCNGG 4 cut(s) 131, 428, 1369, 1745
MunI CAATTG 4 cut(s) 593, 755, 1593, 1779
MvaI CCWGG 1 cut(s) 428
MvnI CGCG 1 cut(s) 141
MwoI GCNNNNNNNGC 1 cut(s) 1020
NciI CCSGG 3 cut(s) 131, 1369, 1745
NcoI CCATGG 1 cut(s) 1464
NdeII GATC 7 cut(s) 106, 600, 728, 1195, 1243, 1300, 1556
NlaIV GGNNCC 2 cut(s) 610, 1622
NmuCI GTSAC 5 cut(s) 95, 422, 685, 712, 1077
NsiI ATGCAT 1 cut(s) 76
NspI RCATGY 2 cut(s) 78, 406
PaeI GCATGC 1 cut(s) 78
PaeR7I CTCGAG 1 cut(s) 1427
PceI AGGCCT 1 cut(s) 1602
PdmI GAANNNNTTC 4 cut(s) 630, 1118, 1530, 1567
PfeI GAWTC 4 cut(s) 83, 751, 1568, 1630
PfoI TCCNGGA 1 cut(s) 1367
PkrI GCNGC 3 cut(s) 6, 171, 1750
PleI GAGTC 1 cut(s) 1544
PpsI GAGTC 1 cut(s) 1544
PpuMI RGGWCCY 1 cut(s) 1715
PshAI GACNNNNGTC 1 cut(s) 719
PshBI ATTAAT 1 cut(s) 38
PsiI TTATAA 1 cut(s) 240
Psp124BI GAGCTC 1 cut(s) 1051
Psp5II RGGWCCY 1 cut(s) 1715
Psp6I CCWGG 1 cut(s) 426
PspEI GGTNACC 1 cut(s) 95
PspGI CCWGG 1 cut(s) 426
PspN4I GGNNCC 2 cut(s) 610, 1622
PspPI GGNCC 2 cut(s) 859, 1715
PspPPI RGGWCCY 1 cut(s) 1715
PstI CTGCAG 1 cut(s) 171
PsuI RGATCY 1 cut(s) 728
RsaI GTAC 4 cut(s) 261, 479, 484, 562
RsaNI GTAC 4 cut(s) 260, 478, 483, 561
RseI CAYNNNNRTG 2 cut(s) 38, 150
SacI GAGCTC 1 cut(s) 1051
SaqAI TTAA 5 cut(s) 38, 500, 921, 1139, 1682
SatI GCNGC 3 cut(s) 5, 170, 1749
Sau3AI GATC 7 cut(s) 106, 600, 728, 1195, 1243, 1300, 1556
Sau96I GGNCC 2 cut(s) 859, 1715
ScaI AGTACT 1 cut(s) 479
SchI GAGTC 1 cut(s) 1545
ScrFI CCNGG 4 cut(s) 131, 428, 1369, 1745
SduI GDGCHC 1 cut(s) 1051
SexAI ACCWGGT 1 cut(s) 426
SfaNI GCATC 2 cut(s) 372, 1181
SfcI CTRYAG 8 cut(s) 167, 672, 717, 724, 1082, 1338, 1405, 1710
Sfr274I CTCGAG 1 cut(s) 1427
SinI GGWCC 1 cut(s) 1715
SlaI CTCGAG 1 cut(s) 1427
SmiMI CAYNNNNRTG 2 cut(s) 38, 150
SmlI CTYRAG 2 cut(s) 794, 1427
SmoI CTYRAG 2 cut(s) 794, 1427
SphI GCATGC 1 cut(s) 78
SseBI AGGCCT 1 cut(s) 1602
SsiI CCGC 1 cut(s) 398
SspI AATATT 1 cut(s) 1453
SspMI CTAG 4 cut(s) 776, 1154, 1241, 1329
SstI GAGCTC 1 cut(s) 1051
StuI AGGCCT 1 cut(s) 1602
StyD4I CCNGG 4 cut(s) 129, 426, 1367, 1743
StyI CCWWGG 5 cut(s) 862, 1123, 1186, 1296, 1464
TaaI ACNGT 6 cut(s) 380, 477, 482, 685, 718, 880
TaiI ACGT 2 cut(s) 520, 1008
TaqI TCGA 5 cut(s) 1428, 1534, 1559, 1573, 1767
TaqII GACCGA 1 cut(s) 371
TatI WGTACW 4 cut(s) 259, 477, 482, 560
TfiI GAWTC 4 cut(s) 83, 751, 1568, 1630
Tru1I TTAA 5 cut(s) 38, 500, 921, 1139, 1682
Tru9I TTAA 5 cut(s) 38, 500, 921, 1139, 1682
TscAI CASTG 3 cut(s) 427, 1480, 1656
TseFI GTSAC 5 cut(s) 95, 422, 685, 712, 1077
TseI GCWGC 3 cut(s) 4, 169, 1748
Tsp45I GTSAC 5 cut(s) 95, 422, 685, 712, 1077
TspGWI ACGGA 1 cut(s) 960
TspRI CASTG 3 cut(s) 427, 1480, 1656
VpaK11BI GGWCC 1 cut(s) 1715
VspI ATTAAT 1 cut(s) 38
XapI RAATTY 7 cut(s) 215, 252, 959, 1114, 1203, 1372, 1575
XceI RCATGY 2 cut(s) 78, 406
XcmI CCANNNNNNNNNTGG 3 cut(s) 152, 869, 1648
XhoI CTCGAG 1 cut(s) 1427
XmiI GTMKAC 4 cut(s) 432, 548, 671, 1485
XmnI GAANNNNTTC 4 cut(s) 630, 1118, 1530, 1567
XspI CTAG 4 cut(s) 776, 1154, 1241, 1329
ZrmI AGTACT 1 cut(s) 479
Zsp2I ATGCAT 1 cut(s) 76
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.