Rroxscaffold_6G00399330

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0000107
Physical Location & Seq
Forward (+)
21257115 .. 21259453
2339 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00399330.1

Sequence Viewer

Length: 1788 bp
ATGCTTCTCAATTTCTTATGGTGGTTGCTCATAGTAGTAGAACTGGTGCATGGTGGAGAAGGCCTTGAAAATTGCATCGAAACGAGGTGTAAACACCATGGCCCAACTATCCGATTTCCCTTTCGAATTAAAGGTAGGCAGCCAAATCACTGTGGTTATGAAGGCTTTGACATATCATGCACCAATGACAAGCAGACTGTTCTGGAGGTCATGCCATTGTCGGCGAGCAAGTTCTTTGTCAAAAACATCAACTATGCATCTCAGGAAATTGAAATATATTACCAGATTGGTTGCCCTCCTCAACAGGTTTTTGACCTCATCAGTTTATTGTCTTCTTCCCCATTCAAATTTGTAGAGGGCGGACGGAACTATACATTATTCAGCTGTCCATCATCGAAGGAACTAGACGAATATCGACGATCTCAGGGTCCTTATTGTGTGGCGAAACTAGGGCCTTGCAACCATGGCAGCAATCCTATAGGCAACCAGTTTTACACTGTTCGTGATGATTATTGCAAGGTTGACAGTCTGCCCCTAGTGTCTTGTACTAAGGTGCATGACTACTACACATCATCATCAGTACCAGACATGTCCACAGGAAGCAGGCACGATGTTCTTAAGCTGCAATGGTCCAAGCCATCATGTCAACATTGCGAAGAGATGGGAAAGACATGTAGACTGAAGAGTGAGCAATTCACACCTATCCAGACTGAAACTACTGAATGTTTAGATGTGCCCAAAGGTACTTTCTCACCTTCTGTGATTCTCATAGTCACAGGAGCTGTCATTTACTATATCTATAGCTCTAAGAAAACAGAAGATGAAAATCAGCTGAGAATTGAAAGATTTTTGGATGACTACAGAGCTCTCAAGCCAAGTAGATACTCCTATGCTGACATTAAGAGGATAACAAATAAATTTGAGGACAAGTTGGGCCAAGGGGCCTATGGAACAGTGTACAAAGGAAAGCTTTCTTCTGAATTATTTGTTGCTGTGAAAATCCTCAACAATTCAAATGAAAAGGGTGGAGATTTTATAAATGAGGTAGGAACAATGGGTCGAATCCACCATGTCAATGTGGTTCGCTTGGTTGGCTTTTGTGCCGATGGATATATACGAGCTCTCATTTATGAATTCTTACCAAATGGTTCATTGCAGAATTTCTTATCACCAGCAGATCGTAAGAACTATTTCCTTGGTTGGGATAGGTTGCAAGATATTGCTTTAGGTGTAGCCAAGGGAATTGAATATCTTCACCAAGGGTGTGATCAAAGAATCCTCCATTTTGATATCAAACCCCATAATGTTTTGCTAGAGGAGGACTTCACCCCAAAAGTTTCTGATTTTGGTCTAGCCAAGTTATGTTCTAAGGATCAAAGCGCAATATCCATGACTACAGCCAGAGGGACCATGGGCTACATAGCGCCCGAAGTGTTCTCTAGGAACTTTGGTAACGTGTCTTATAAGTCAGATGTCTATAGTTTTGGAACATTGTTGCTGGAAATGGTTGGTGGTAGAAAAAATTTTAAAGTCACTGAGGACTCCACCAGCGAAGTCTACTTCCCAGAGTGGATCTATAACCTCTTAGAAGAAGGGAACGACCTACGAATCCATATTGAGGACGAAGGAGATGGTAAAATTGCTAGGAAGCTTGCAATCGTGGGTCTATGGTGCATCCAATGGCACCCAGTAGATCGTCCGCCCATGAAACTCGTAGTTCAAATGTTGGAAAGAGAAGGTGACAATCTAACCATGCCTCCTAATCCTTTTGCCTCTACTTCAAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase Pkinase_Tyr

Protein Analysis

595

Amino Acids

67.47

Weight (kDa)

6.24

Isoelectric Point (pI)

41.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 25 - 93 3.3e-17 Wall-associated receptor kinase galacturonan-binding
PK_Tyr_Ser-Thr PF07714 306 - 573 3.4e-43 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 308 - 572 2.6e-45 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1037, 1464
AccB1I GGYRCC 1 cut(s) 1683
AccI GTMKAC 2 cut(s) 676, 1557
AciI CCGC 2 cut(s) 360, 1700
AclWI GGATC 2 cut(s) 1380, 1580
AcsI RAATTY 5 cut(s) 347, 917, 1133, 1159, 1522
AcuI CTGAAG 1 cut(s) 701
AfaI GTAC 4 cut(s) 547, 582, 745, 959
AfiI CCNNNNNNNGG 2 cut(s) 1201, 1618
AflII CTTAAG 1 cut(s) 617
AflIII ACRYGT 3 cut(s) 588, 671, 1455
AgsI TTSAA 8 cut(s) 68, 272, 346, 842, 1014, 1247, 1721, 1782
AjuI GAANNNNNNNTTGG 2 cut(s) 731, 763
AluBI AGCT 9 cut(s) 384, 622, 782, 804, 832, 866, 970, 1121, 1651
AluI AGCT 9 cut(s) 384, 622, 782, 804, 832, 866, 970, 1121, 1651
Alw21I GWGCWC 2 cut(s) 868, 1123
AlwI GGATC 2 cut(s) 1380, 1580
AlwNI CAGNNNCTG 1 cut(s) 782
AoxI GGCC 5 cut(s) 61, 100, 452, 934, 942
ApeKI GCWGC 3 cut(s) 139, 468, 622
ApoI RAATTY 5 cut(s) 347, 917, 1133, 1159, 1522
Asp700I GAANNNNTTC 3 cut(s) 970, 1190, 1251
AspLEI GCGC 2 cut(s) 1382, 1426
AspS9I GGNCC 7 cut(s) 101, 428, 452, 630, 934, 942, 1407
AsuHPI GGTGA 5 cut(s) 744, 1161, 1247, 1318, 1751
AsuII TTCGAA 1 cut(s) 124
AvaII GGWCC 3 cut(s) 428, 630, 1407
BaeGI GKGCMC 1 cut(s) 738
BanI GGYRCC 1 cut(s) 1683
BanII GRGCYC 2 cut(s) 868, 1123
BbsI GAAGAC 1 cut(s) 324
Bbv12I GWGCWC 2 cut(s) 868, 1123
BbvI GCAGC 3 cut(s) 151, 480, 609
BccI CCATC 5 cut(s) 397, 646, 655, 1100, 1625
BclI TGATCA 1 cut(s) 1267
BfaI CTAG 7 cut(s) 404, 449, 536, 1313, 1352, 1440, 1644
BfmI CTRYAG 5 cut(s) 477, 799, 859, 1395, 1477
BfoI RGCGCY 1 cut(s) 1427
BfrI CTTAAG 1 cut(s) 617
BisI GCNGC 3 cut(s) 140, 469, 623
BlsI GCNGC 3 cut(s) 141, 470, 624
Bme18I GGWCC 3 cut(s) 428, 630, 1407
BmgT120I GGNCC 7 cut(s) 101, 428, 452, 630, 934, 942, 1407
BmiI GGNNCC 4 cut(s) 429, 943, 1408, 1685
BmrI ACTGGG 1 cut(s) 1682
BmsI GCATC 3 cut(s) 84, 266, 1683
BmuI ACTGGG 1 cut(s) 1682
BpiI GAAGAC 1 cut(s) 324
BpmI CTGGAG 1 cut(s) 224
Bpu14I TTCGAA 1 cut(s) 124
BpuEI CTTGAG 1 cut(s) 854
BsaBI GATNNNNATC 1 cut(s) 825
BsaJI CCNNGG 7 cut(s) 97, 463, 937, 1195, 1236, 1258, 1410
BsaXI ACNNNNNCTCC 2 cut(s) 1741, 1771
Bsc4I CCNNNNNNNGG 2 cut(s) 1201, 1618
Bse1I ACTGG 3 cut(s) 48, 487, 1688
Bse3DI GCAATG 3 cut(s) 632, 649, 1151
Bse8I GATNNNNATC 1 cut(s) 825
BseDI CCNNGG 7 cut(s) 97, 463, 937, 1195, 1236, 1258, 1410
BseGI GGATG 2 cut(s) 859, 1674
BseJI GATNNNNATC 1 cut(s) 825
BseLI CCNNNNNNNGG 2 cut(s) 1201, 1618
BseMI GCAATG 3 cut(s) 632, 649, 1151
BseMII CTCAG 4 cut(s) 275, 437, 824, 1527
BseNI ACTGG 3 cut(s) 48, 487, 1688
BseRI GAGGAG 2 cut(s) 288, 1331
BseSI GKGCMC 1 cut(s) 738
BseXI GCAGC 3 cut(s) 151, 480, 609
BshFI GGCC 5 cut(s) 63, 102, 454, 936, 944
BshNI GGYRCC 1 cut(s) 1683
BsiHKAI GWGCWC 2 cut(s) 868, 1123
BslFI GGGAC 1 cut(s) 1420
BslI CCNNNNNNNGG 2 cut(s) 1201, 1618
BsmFI GGGAC 1 cut(s) 1420
BsnI GGCC 5 cut(s) 63, 102, 454, 936, 944
Bsp119I TTCGAA 1 cut(s) 124
Bsp1286I GDGCHC 3 cut(s) 738, 868, 1123
Bsp1407I TGTACA 1 cut(s) 957
Bsp143I GATC 6 cut(s) 419, 1177, 1267, 1372, 1572, 1693
Bsp19I CCATGG 3 cut(s) 97, 463, 1410
BspACI CCGC 2 cut(s) 360, 1700
BspANI GGCC 5 cut(s) 63, 102, 454, 936, 944
BspCNI CTCAG 4 cut(s) 274, 436, 825, 1528
BspLI GGNNCC 4 cut(s) 429, 943, 1408, 1685
BspPI GGATC 2 cut(s) 1380, 1580
BspT104I TTCGAA 1 cut(s) 124
BspT107I GGYRCC 1 cut(s) 1683
BspTI CTTAAG 1 cut(s) 617
BsrDI GCAATG 3 cut(s) 632, 649, 1151
BsrGI TGTACA 1 cut(s) 957
BsrI ACTGG 3 cut(s) 48, 487, 1688
BssECI CCNNGG 7 cut(s) 97, 463, 937, 1195, 1236, 1258, 1410
BssMI GATC 6 cut(s) 419, 1177, 1267, 1372, 1572, 1693
BssT1I CCWWGG 7 cut(s) 97, 463, 937, 1195, 1236, 1258, 1410
Bst4CI ACNGT 5 cut(s) 152, 199, 499, 527, 955
Bst6I CTCTTC 2 cut(s) 651, 677
BstAFI CTTAAG 1 cut(s) 617
BstAUI TGTACA 1 cut(s) 957
BstBI TTCGAA 1 cut(s) 124
BstC8I GCNNGC 3 cut(s) 226, 605, 1653
BstDEI CTNAG 8 cut(s) 261, 423, 549, 807, 833, 1368, 1536, 1585
BstDSI CCRYGG 3 cut(s) 97, 463, 1410
BstF5I GGATG 2 cut(s) 859, 1674
BstH2I RGCGCY 1 cut(s) 1427
BstHHI GCGC 2 cut(s) 1382, 1426
BstKTI GATC 6 cut(s) 422, 1180, 1270, 1375, 1575, 1696
BstMBI GATC 6 cut(s) 419, 1177, 1267, 1372, 1572, 1693
BstMWI GCNNNNNNNGC 2 cut(s) 465, 1092
BstNSI RCATGY 2 cut(s) 592, 675
BstSFI CTRYAG 5 cut(s) 477, 799, 859, 1395, 1477
BstSLI GKGCMC 1 cut(s) 738
BstV1I GCAGC 3 cut(s) 151, 480, 609
BstV2I GAAGAC 1 cut(s) 324
BstX2I RGATCY 1 cut(s) 1572
BstYI RGATCY 1 cut(s) 1572
BsuRI GGCC 5 cut(s) 63, 102, 454, 936, 944
BtgI CCRYGG 3 cut(s) 97, 463, 1410
BtsCI GGATG 2 cut(s) 859, 1674
BtsIMutI CAGTG 4 cut(s) 148, 495, 960, 1533
Cac8I GCNNGC 3 cut(s) 226, 605, 1653
CaiI CAGNNNCTG 1 cut(s) 782
CfoI GCGC 2 cut(s) 1382, 1426
Cfr13I GGNCC 7 cut(s) 101, 428, 452, 630, 934, 942, 1407
Csp6I GTAC 4 cut(s) 546, 581, 744, 958
CviQI GTAC 4 cut(s) 546, 581, 744, 958
DdeI CTNAG 8 cut(s) 261, 423, 549, 807, 833, 1368, 1536, 1585
DpnI GATC 6 cut(s) 421, 1179, 1269, 1374, 1574, 1695
DpnII GATC 6 cut(s) 419, 1177, 1267, 1372, 1572, 1693
DraI TTTAAA 1 cut(s) 1528
Eam1104I CTCTTC 2 cut(s) 651, 677
EarI CTCTTC 2 cut(s) 651, 677
EciI GGCGGA 2 cut(s) 375, 1689
Ecl136II GAGCTC 2 cut(s) 866, 1121
Eco130I CCWWGG 7 cut(s) 97, 463, 937, 1195, 1236, 1258, 1410
Eco147I AGGCCT 1 cut(s) 63
Eco24I GRGCYC 2 cut(s) 868, 1123
Eco32I GATATC 1 cut(s) 1291
Eco47I GGWCC 3 cut(s) 428, 630, 1407
Eco53kI GAGCTC 2 cut(s) 866, 1121
Eco57I CTGAAG 1 cut(s) 701
EcoICRI GAGCTC 2 cut(s) 866, 1121
EcoO109I RGGNCCY 3 cut(s) 428, 452, 942
EcoRI GAATTC 1 cut(s) 1133
EcoRV GATATC 1 cut(s) 1291
EcoT14I CCWWGG 7 cut(s) 97, 463, 937, 1195, 1236, 1258, 1410
EcoT22I ATGCAT 1 cut(s) 259
EcoT38I GRGCYC 2 cut(s) 868, 1123
ErhI CCWWGG 7 cut(s) 97, 463, 937, 1195, 1236, 1258, 1410
FalI AAGNNNNNCTT 2 cut(s) 954, 986
FaqI GGGAC 1 cut(s) 1420
FbaI TGATCA 1 cut(s) 1267
FblI GTMKAC 2 cut(s) 676, 1557
Fnu4HI GCNGC 3 cut(s) 140, 469, 623
FokI GGATG 2 cut(s) 866, 1661
FriOI GRGCYC 2 cut(s) 868, 1123
Fsp4HI GCNGC 3 cut(s) 140, 469, 623
FspBI CTAG 7 cut(s) 404, 449, 536, 1313, 1352, 1440, 1644
GlaI GCGC 2 cut(s) 1381, 1425
GluI GCNGC 3 cut(s) 140, 469, 623
GsuI CTGGAG 1 cut(s) 224
HaeII RGCGCY 1 cut(s) 1427
HaeIII GGCC 5 cut(s) 63, 102, 454, 936, 944
HhaI GCGC 2 cut(s) 1382, 1426
Hin6I GCGC 2 cut(s) 1380, 1424
HinP1I GCGC 2 cut(s) 1380, 1424
HincII GTYRAC 2 cut(s) 523, 647
HindII GTYRAC 2 cut(s) 523, 647
HindIII AAGCTT 2 cut(s) 968, 1649
HinfI GANTC 5 cut(s) 763, 1062, 1275, 1541, 1608
HphI GGTGA 5 cut(s) 744, 1161, 1247, 1318, 1751
Hpy166II GTNNAC 7 cut(s) 92, 523, 594, 647, 677, 958, 1558
Hpy188I TCNGA 4 cut(s) 113, 979, 1342, 1471
Hpy188III TCNNGA 4 cut(s) 203, 263, 503, 706
Hpy8I GTNNAC 7 cut(s) 92, 523, 594, 647, 677, 958, 1558
Hpy99I CGWCG 1 cut(s) 420
HpyAV CCTTC 7 cut(s) 53, 155, 391, 765, 1586, 1619, 1730
HpyCH4III ACNGT 5 cut(s) 152, 199, 499, 527, 955
HpyCH4IV ACGT 1 cut(s) 1455
HpyF10VI GCNNNNNNNGC 2 cut(s) 465, 1092
HpyF3I CTNAG 8 cut(s) 261, 423, 549, 807, 833, 1368, 1536, 1585
HpySE526I ACGT 1 cut(s) 1455
HspAI GCGC 2 cut(s) 1380, 1424
Ksp22I TGATCA 1 cut(s) 1267
Kzo9I GATC 6 cut(s) 419, 1177, 1267, 1372, 1572, 1693
LmnI GCTCC 1 cut(s) 779
Lsp1109I GCAGC 3 cut(s) 151, 480, 609
LweI GCATC 3 cut(s) 84, 266, 1683
MaeI CTAG 7 cut(s) 404, 449, 536, 1313, 1352, 1440, 1644
MaeII ACGT 1 cut(s) 1455
MaeIII GTNAC 4 cut(s) 772, 1451, 1531, 1739
MalI GATC 6 cut(s) 421, 1179, 1269, 1374, 1574, 1695
MboI GATC 6 cut(s) 419, 1177, 1267, 1372, 1572, 1693
MboII GAAGA 8 cut(s) 324, 327, 668, 694, 830, 966, 1244, 1601
MflI RGATCY 1 cut(s) 1572
MhlI GDGCHC 3 cut(s) 738, 868, 1123
MlyI GAGTC 1 cut(s) 1535
MmeI TCCRAC 1 cut(s) 1707
Mph1103I ATGCAT 1 cut(s) 259
MroXI GAANNNNTTC 3 cut(s) 970, 1190, 1251
MseI TTAA 4 cut(s) 129, 618, 900, 1527
MslI CAYNNNNRTG 1 cut(s) 1074
MspA1I CMGCKG 2 cut(s) 384, 832
MspCI CTTAAG 1 cut(s) 617
MwoI GCNNNNNNNGC 2 cut(s) 465, 1092
NcoI CCATGG 3 cut(s) 97, 463, 1410
NdeII GATC 6 cut(s) 419, 1177, 1267, 1372, 1572, 1693
NlaIV GGNNCC 4 cut(s) 429, 943, 1408, 1685
NmuCI GTSAC 3 cut(s) 772, 1531, 1739
NsiI ATGCAT 1 cut(s) 259
NspI RCATGY 2 cut(s) 592, 675
NspV TTCGAA 1 cut(s) 124
PceI AGGCCT 1 cut(s) 63
PciI ACATGT 2 cut(s) 588, 671
PdmI GAANNNNTTC 3 cut(s) 970, 1190, 1251
PfeI GAWTC 4 cut(s) 763, 1062, 1275, 1608
PkrI GCNGC 3 cut(s) 141, 470, 624
PleI GAGTC 1 cut(s) 1535
PpsI GAGTC 1 cut(s) 1535
PpuMI RGGWCCY 1 cut(s) 428
PscI ACATGT 2 cut(s) 588, 671
PsiI TTATAA 2 cut(s) 1037, 1464
Psp124BI GAGCTC 2 cut(s) 868, 1123
Psp5II RGGWCCY 1 cut(s) 428
PspN4I GGNNCC 4 cut(s) 429, 943, 1408, 1685
PspPI GGNCC 7 cut(s) 101, 428, 452, 630, 934, 942, 1407
PspPPI RGGWCCY 1 cut(s) 428
PstNI CAGNNNCTG 1 cut(s) 782
PsuI RGATCY 1 cut(s) 1572
PvuII CAGCTG 2 cut(s) 384, 832
RsaI GTAC 4 cut(s) 547, 582, 745, 959
RsaNI GTAC 4 cut(s) 546, 581, 744, 958
RseI CAYNNNNRTG 1 cut(s) 1074
SacI GAGCTC 2 cut(s) 868, 1123
SaqAI TTAA 4 cut(s) 129, 618, 900, 1527
SatI GCNGC 3 cut(s) 140, 469, 623
Sau3AI GATC 6 cut(s) 419, 1177, 1267, 1372, 1572, 1693
Sau96I GGNCC 7 cut(s) 101, 428, 452, 630, 934, 942, 1407
SchI GAGTC 1 cut(s) 1535
SduI GDGCHC 3 cut(s) 738, 868, 1123
SfaNI GCATC 3 cut(s) 84, 266, 1683
SfcI CTRYAG 5 cut(s) 477, 799, 859, 1395, 1477
SfuI TTCGAA 1 cut(s) 124
SinI GGWCC 3 cut(s) 428, 630, 1407
SmiMI CAYNNNNRTG 1 cut(s) 1074
SmlI CTYRAG 2 cut(s) 617, 869
SmoI CTYRAG 2 cut(s) 617, 869
SseBI AGGCCT 1 cut(s) 63
SsiI CCGC 2 cut(s) 360, 1700
SspMI CTAG 7 cut(s) 404, 449, 536, 1313, 1352, 1440, 1644
SstI GAGCTC 2 cut(s) 868, 1123
StuI AGGCCT 1 cut(s) 63
StyI CCWWGG 7 cut(s) 97, 463, 937, 1195, 1236, 1258, 1410
TaaI ACNGT 5 cut(s) 152, 199, 499, 527, 955
TaiI ACGT 1 cut(s) 1458
TaqI TCGA 5 cut(s) 78, 124, 395, 415, 1060
TatI WGTACW 2 cut(s) 545, 957
TfiI GAWTC 4 cut(s) 763, 1062, 1275, 1608
Tru1I TTAA 4 cut(s) 129, 618, 900, 1527
Tru9I TTAA 4 cut(s) 129, 618, 900, 1527
TscAI CASTG 4 cut(s) 155, 502, 960, 1540
TseFI GTSAC 3 cut(s) 772, 1531, 1739
TseI GCWGC 3 cut(s) 139, 468, 622
Tsp45I GTSAC 3 cut(s) 772, 1531, 1739
TspDTI ATGAA 6 cut(s) 174, 837, 1032, 1140, 1146, 1721
TspGWI ACGGA 1 cut(s) 379
TspRI CASTG 4 cut(s) 155, 502, 960, 1540
Vha464I CTTAAG 1 cut(s) 617
VpaK11BI GGWCC 3 cut(s) 428, 630, 1407
XapI RAATTY 5 cut(s) 347, 917, 1133, 1159, 1522
XceI RCATGY 2 cut(s) 592, 675
XcmI CCANNNNNNNNNTGG 2 cut(s) 944, 1408
XmiI GTMKAC 2 cut(s) 676, 1557
XmnI GAANNNNTTC 3 cut(s) 970, 1190, 1251
XspI CTAG 7 cut(s) 404, 449, 536, 1313, 1352, 1440, 1644
Zsp2I ATGCAT 1 cut(s) 259
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.