pycom02g23470

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
OG0000107
Physical Location & Seq
Forward (+)
21547691 .. 21549841
2151 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g23470.2

Sequence Viewer

Length: 1818 bp
ATGACAATCTCTTTCTTCATCCTGTTGTTCACGGTAGGTCTCATGATTAACCTTGGAGCATGCCAAAATAAGTGCACAGAATCACGCTGCGGAGACGATGGTCCGCCTATCCGATTCCCATTTCGACTCAGAGAGAAACAGCCAAGCCACTGTGGCTATCCTGGATTTGATTTATCCTGCGATCGAAGCAACAACACGGTGCTTGAGCTGCCAGTTTCCGTTAAGTTCTTCGTCATTAGTATCAACTACAAATCTCAGGTGATTCAAGTATCTGATCCAGATCATTGTGCTCCAAGACATCTTCCGAAACTTAATTTATCTTCCTCTGCTTTCATATTCCAAAGGCCGGACCTATATGACTATACCTTATTTAGTTGTTCACCAGCAAAAAGAGATCTATATTATGATTCAATCCCTTGCCTTAGTGGGACTAGCCATCATATATATCCTATACCTTCACATAGTTTCGTTGACAGTCTTCCCCTTACATCTTGTACCAAGTTGTACAACTTTCCATTCAGTGTCCCATATGATATATTCGAACCAAATTATTTTCTTCGTTTGGAATGGTCCAAACCAACATGTAACAGATGTGAAAGGAGAGGTAAAGGATGTAGACTGAAGGCCAACAATCGCACCAACTCCGAAACTGAGTGCTTCAATGTAAGCAAGCAAAACGGAACCGCGAAAAAACTAGTTGTTACAGGTGCAGTCCTTGGTTCATTTTCACTTGTGCTGATACTTGTCGGACTCCATCGTGTATATACTTTTGACCGAAAAGAAAAGGAGCGGCAAACCATGATCGAAGAATTTTTGGAAAACTACAGAGCTCTCAGGCCTACAAGGTACTCATATGCAGATATCAAGCGGATTACAAATAAATTTAGAGACAAGTTGGGACAGGGAACATTTGGAACAGTGTTCAAAGGAAAGCTTTCGAGTGAGATCTTTGTTGCTGTAAAGATGCTCAACAATTCCAAAGGAAATGGAGAAGAGTTTATCAATGAAGTGGGAACATTAGGTCGGATCCACCATATTAACGTGGTTCGCTTGGTTGGATATTGCGCTGATGGATTTAGGCGAGCCTTAGTTTATGAATTTGCACCAAACAGTTCACTGCAAAATTTCATTTCGTCAGCAGACAGCAAGAACCATTTCCTTGGTTGGGAGAAGCTGCAACATATTACACTCAGCATAGCCAAAGGAATTGAGTATCTTCACCACGGATGTGACCAACGAATCCTTCATTTCGATATCAAACCTCACAATGTTCTATTAGATGACAACTTCAACCCAAAAATCTCTGATTTCGGTCTTGCCAAGTTGTGCTCCAAGGACCAAAGTGCAGTTTCCATGACAACTGCTAGGGGTACCATGGGATACATTGCACCGGAAGTGTTCTCAAGGAACTTTGGTACCGTGTCTTACAAGTCAGATGTTTATAGTTTTGGAATGTTGTTACTTGAAATGGTTGCAGGCAGGAAAAATGTTCAAGTCACAGTGGAGAATACAGGGCAAGTTTATTTCCCCGAATGGATCTATAATCTTCTAGAACAAGGGGATGACATACGCATCCACGTTGAGGAAGAGAATGATGCTAAAATTGCCACGAAACTTGCCATTGTGGGGCTATGGTGCATCCAGTGGTATCCAGTAGACCGTCCTTCGATGAAAGCTGTCGTTCAAATGTTGGAAGGAGAAGACAATGTAAAATTGCCTCCTAATCCTTTCTCCTCTGCCGCTTCAGCAAGAAACGATATCACTATGCTTGCAAAACGCCATCGCCAAGAGTTACCAGTCATCTCCGAATTAGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase Pkinase_Tyr

Protein Analysis

606

Amino Acids

68.7

Weight (kDa)

8.6

Isoelectric Point (pI)

40.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 1370, 1415
AccB1I GGYRCC 2 cut(s) 1370, 1415
AccBSI CCGCTC 1 cut(s) 790
AccI GTMKAC 2 cut(s) 616, 1656
AccII CGCG 1 cut(s) 686
AciI CCGC 6 cut(s) 90, 104, 684, 790, 868, 1740
AclWI GGATC 4 cut(s) 269, 1021, 1034, 1544
AcsI RAATTY 4 cut(s) 809, 881, 1097, 1123
AcuI CTGAAG 2 cut(s) 641, 1728
AfaI GTAC 5 cut(s) 496, 506, 848, 1372, 1417
AfiI CCNNNNNNNGG 4 cut(s) 346, 1165, 1582, 1626
AflIII ACRYGT 1 cut(s) 581
AgsI TTSAA 8 cut(s) 266, 411, 661, 925, 1291, 1466, 1493, 1685
AhlI ACTAGT 1 cut(s) 694
AjnI CCWGG 1 cut(s) 160
AjuI GAANNNNNNNTTGG 2 cut(s) 1227, 1259
AleI CACNNNNGTG 1 cut(s) 1227
AluBI AGCT 5 cut(s) 208, 830, 934, 1174, 1676
AluI AGCT 5 cut(s) 208, 830, 934, 1174, 1676
Alw21I GWGCWC 4 cut(s) 77, 292, 832, 1331
Alw26I GTCTC 3 cut(s) 44, 87, 882
Alw44I GTGCAC 1 cut(s) 73
AlwI GGATC 4 cut(s) 269, 1021, 1034, 1544
AoxI GGCC 3 cut(s) 344, 624, 836
ApaLI GTGCAC 1 cut(s) 73
ApeKI GCWGC 3 cut(s) 87, 208, 1174
ApoI RAATTY 4 cut(s) 809, 881, 1097, 1123
Asp700I GAANNNNTTC 2 cut(s) 934, 1154
Asp718I GGTACC 2 cut(s) 1370, 1415
AspLEI GCGC 1 cut(s) 1067
AspS9I GGNCC 4 cut(s) 101, 349, 570, 1336
AsuHPI GGTGA 3 cut(s) 271, 372, 1211
AsuII TTCGAA 1 cut(s) 540
AvaII GGWCC 4 cut(s) 101, 349, 570, 1336
BaeGI GKGCMC 1 cut(s) 77
BaeI ACNNNNGTAYC 2 cut(s) 1399, 1432
BamHI GGATCC 1 cut(s) 1026
BanI GGYRCC 2 cut(s) 1370, 1415
BanII GRGCYC 1 cut(s) 832
BbsI GAAGAC 2 cut(s) 470, 1707
Bbv12I GWGCWC 4 cut(s) 77, 292, 832, 1331
BbvI GCAGC 3 cut(s) 74, 195, 1161
BccI CCATC 5 cut(s) 92, 444, 762, 1064, 1788
BciT130I CCWGG 1 cut(s) 162
BciVI GTATCC 2 cut(s) 1373, 1659
BcoDI GTCTC 3 cut(s) 44, 87, 882
BcuI ACTAGT 1 cut(s) 694
BfaI CTAG 4 cut(s) 432, 695, 1365, 1550
BfmI CTRYAG 1 cut(s) 823
BfuI GTATCC 2 cut(s) 1373, 1659
BglI GCCNNNNNGGC 1 cut(s) 153
BglII AGATCT 2 cut(s) 394, 945
BisI GCNGC 5 cut(s) 88, 209, 791, 1175, 1740
BlsI GCNGC 5 cut(s) 89, 210, 792, 1176, 1741
Bme1390I CCNGG 1 cut(s) 162
Bme18I GGWCC 4 cut(s) 101, 349, 570, 1336
BmgT120I GGNCC 4 cut(s) 101, 349, 570, 1336
BmiI GGNNCC 4 cut(s) 682, 1028, 1372, 1417
BmrFI CCNGG 1 cut(s) 162
BmsI GCATC 4 cut(s) 954, 1581, 1585, 1647
BoxI GACNNNNGTC 1 cut(s) 99
BpiI GAAGAC 2 cut(s) 470, 1707
Bpu14I TTCGAA 1 cut(s) 540
BpuEI CTTGAG 2 cut(s) 224, 1387
BsaBI GATNNNNATC 1 cut(s) 279
BsaI GGTCTC 1 cut(s) 44
BsaJI CCNNGG 6 cut(s) 52, 715, 1159, 1222, 1332, 1374
BsaWI WCCGGW 1 cut(s) 1390
Bsc4I CCNNNNNNNGG 4 cut(s) 346, 1165, 1582, 1626
Bse1I ACTGG 4 cut(s) 212, 1642, 1652, 1796
Bse3DI GCAATG 1 cut(s) 1383
Bse8I GATNNNNATC 1 cut(s) 279
BseBI CCWGG 1 cut(s) 162
BseDI CCNNGG 6 cut(s) 52, 715, 1159, 1222, 1332, 1374
BseGI GGATG 6 cut(s) 18, 617, 1232, 1567, 1572, 1638
BseJI GATNNNNATC 1 cut(s) 279
BseLI CCNNNNNNNGG 4 cut(s) 346, 1165, 1582, 1626
BseMI GCAATG 1 cut(s) 1383
BseMII CTCAG 5 cut(s) 142, 269, 642, 847, 1204
BseNI ACTGG 4 cut(s) 212, 1642, 1652, 1796
BseRI GAGGAG 1 cut(s) 1723
BseSI GKGCMC 1 cut(s) 77
BseXI GCAGC 3 cut(s) 74, 195, 1161
BsgI GTGCAG 2 cut(s) 729, 1365
Bsh1236I CGCG 1 cut(s) 686
Bsh1285I CGRYCG 1 cut(s) 184
BshFI GGCC 3 cut(s) 346, 626, 838
BshNI GGYRCC 2 cut(s) 1370, 1415
BsiEI CGRYCG 1 cut(s) 184
BsiHKAI GWGCWC 4 cut(s) 77, 292, 832, 1331
BsiSI CCGG 2 cut(s) 347, 1391
BslFI GGGAC 3 cut(s) 442, 509, 912
BslI CCNNNNNNNGG 4 cut(s) 346, 1165, 1582, 1626
BsmAI GTCTC 3 cut(s) 44, 87, 882
BsmBI CGTCTC 1 cut(s) 87
BsmFI GGGAC 3 cut(s) 442, 509, 912
BsnI GGCC 3 cut(s) 346, 626, 838
Bso31I GGTCTC 1 cut(s) 44
Bsp119I TTCGAA 1 cut(s) 540
Bsp1286I GDGCHC 4 cut(s) 77, 292, 832, 1331
Bsp1407I TGTACA 1 cut(s) 504
Bsp143I GATC 8 cut(s) 181, 274, 280, 394, 801, 945, 1026, 1536
Bsp19I CCATGG 1 cut(s) 1374
BspACI CCGC 6 cut(s) 90, 104, 684, 790, 868, 1740
BspANI GGCC 3 cut(s) 346, 626, 838
BspCNI CTCAG 5 cut(s) 141, 268, 643, 846, 1203
BspFNI CGCG 1 cut(s) 686
BspHI TCATGA 1 cut(s) 42
BspLI GGNNCC 4 cut(s) 682, 1028, 1372, 1417
BspPI GGATC 4 cut(s) 269, 1021, 1034, 1544
BspT104I TTCGAA 1 cut(s) 540
BspT107I GGYRCC 2 cut(s) 1370, 1415
BspTNI GGTCTC 1 cut(s) 44
BsrBI CCGCTC 1 cut(s) 790
BsrDI GCAATG 1 cut(s) 1383
BsrGI TGTACA 1 cut(s) 504
BsrI ACTGG 4 cut(s) 212, 1642, 1652, 1796
BssECI CCNNGG 6 cut(s) 52, 715, 1159, 1222, 1332, 1374
BssMI GATC 8 cut(s) 181, 274, 280, 394, 801, 945, 1026, 1536
BssT1I CCWWGG 5 cut(s) 52, 715, 1159, 1332, 1374
Bst2UI CCWGG 1 cut(s) 162
Bst4CI ACNGT 9 cut(s) 34, 152, 199, 476, 919, 1112, 1420, 1501, 1661
Bst6I CTCTTC 2 cut(s) 987, 1581
BstAUI TGTACA 1 cut(s) 504
BstBI TTCGAA 1 cut(s) 540
BstC8I GCNNGC 5 cut(s) 61, 671, 1083, 1477, 1770
BstDEI CTNAG 7 cut(s) 128, 255, 422, 651, 833, 1087, 1190
BstDSI CCRYGG 2 cut(s) 1222, 1374
BstF5I GGATG 6 cut(s) 18, 617, 1232, 1567, 1572, 1638
BstFNI CGCG 1 cut(s) 686
BstHHI GCGC 1 cut(s) 1067
BstKTI GATC 8 cut(s) 184, 277, 283, 397, 804, 948, 1029, 1539
BstMAI GTCTC 3 cut(s) 44, 87, 882
BstMBI GATC 8 cut(s) 181, 274, 280, 394, 801, 945, 1026, 1536
BstMCI CGRYCG 1 cut(s) 184
BstMWI GCNNNNNNNGC 5 cut(s) 153, 186, 208, 1604, 1745
BstNI CCWGG 1 cut(s) 162
BstNSI RCATGY 2 cut(s) 63, 585
BstPAI GACNNNNGTC 1 cut(s) 99
BstSCI CCNGG 1 cut(s) 160
BstSFI CTRYAG 1 cut(s) 823
BstSLI GKGCMC 1 cut(s) 77
BstUI CGCG 1 cut(s) 686
BstV1I GCAGC 3 cut(s) 74, 195, 1161
BstV2I GAAGAC 2 cut(s) 470, 1707
BstX2I RGATCY 4 cut(s) 394, 945, 1026, 1536
BstXI CCANNNNNNTGG 1 cut(s) 1160
BstYI RGATCY 4 cut(s) 394, 945, 1026, 1536
BsuI GTATCC 2 cut(s) 1373, 1659
BsuRI GGCC 3 cut(s) 346, 626, 838
BtgI CCRYGG 2 cut(s) 1222, 1374
BtgZI GCGATG 1 cut(s) 1766
BtsCI GGATG 6 cut(s) 18, 617, 1232, 1567, 1572, 1638
BtsI GCAGTG 1 cut(s) 1115
BtsIMutI CAGTG 6 cut(s) 148, 526, 924, 1115, 1506, 1649
Cac8I GCNNGC 5 cut(s) 61, 671, 1083, 1477, 1770
CciI TCATGA 1 cut(s) 42
CfoI GCGC 1 cut(s) 1067
Cfr13I GGNCC 4 cut(s) 101, 349, 570, 1336
Csp6I GTAC 5 cut(s) 495, 505, 847, 1371, 1416
CspCI CAANNNNNGTGG 2 cut(s) 1597, 1632
CviAII CATG 6 cut(s) 43, 60, 582, 799, 1354, 1375
CviQI GTAC 5 cut(s) 495, 505, 847, 1371, 1416
DdeI CTNAG 7 cut(s) 128, 255, 422, 651, 833, 1087, 1190
DpnI GATC 8 cut(s) 183, 276, 282, 396, 803, 947, 1028, 1538
DpnII GATC 8 cut(s) 181, 274, 280, 394, 801, 945, 1026, 1536
Eam1104I CTCTTC 2 cut(s) 987, 1581
EarI CTCTTC 2 cut(s) 987, 1581
EciI GGCGGA 1 cut(s) 93
Ecl136II GAGCTC 1 cut(s) 830
Eco130I CCWWGG 5 cut(s) 52, 715, 1159, 1332, 1374
Eco147I AGGCCT 1 cut(s) 838
Eco24I GRGCYC 1 cut(s) 832
Eco31I GGTCTC 1 cut(s) 44
Eco32I GATATC 3 cut(s) 862, 1255, 1759
Eco47I GGWCC 4 cut(s) 101, 349, 570, 1336
Eco53kI GAGCTC 1 cut(s) 830
Eco57I CTGAAG 2 cut(s) 641, 1728
EcoICRI GAGCTC 1 cut(s) 830
EcoRII CCWGG 1 cut(s) 160
EcoRV GATATC 3 cut(s) 862, 1255, 1759
EcoT14I CCWWGG 5 cut(s) 52, 715, 1159, 1332, 1374
EcoT38I GRGCYC 1 cut(s) 832
ErhI CCWWGG 5 cut(s) 52, 715, 1159, 1332, 1374
Esp3I CGTCTC 1 cut(s) 87
FaeI CATG 6 cut(s) 46, 63, 585, 802, 1357, 1378
FalI AAGNNNNNCTT 2 cut(s) 918, 950
FaqI GGGAC 3 cut(s) 442, 509, 912
FatI CATG 6 cut(s) 42, 59, 581, 798, 1353, 1374
FauNDI CATATG 2 cut(s) 529, 853
FblI GTMKAC 2 cut(s) 616, 1656
Fnu4HI GCNGC 5 cut(s) 88, 209, 791, 1175, 1740
FokI GGATG 6 cut(s) 5, 624, 1239, 1559, 1574, 1625
FriOI GRGCYC 1 cut(s) 832
Fsp4HI GCNGC 5 cut(s) 88, 209, 791, 1175, 1740
FspBI CTAG 4 cut(s) 432, 695, 1365, 1550
GlaI GCGC 1 cut(s) 1066
GluI GCNGC 5 cut(s) 88, 209, 791, 1175, 1740
HaeIII GGCC 3 cut(s) 346, 626, 838
HapII CCGG 2 cut(s) 347, 1391
HhaI GCGC 1 cut(s) 1067
Hin1II CATG 6 cut(s) 46, 63, 585, 802, 1357, 1378
Hin6I GCGC 1 cut(s) 1065
HinP1I GCGC 1 cut(s) 1065
HincII GTYRAC 1 cut(s) 472
HindII GTYRAC 1 cut(s) 472
HindIII AAGCTT 1 cut(s) 932
HinfI GANTC 7 cut(s) 80, 114, 126, 262, 407, 750, 1239
HpaII CCGG 2 cut(s) 347, 1391
HphI GGTGA 3 cut(s) 271, 372, 1211
Hpy166II GTNNAC 7 cut(s) 30, 75, 380, 472, 617, 1115, 1657
Hpy188III TCNNGA 3 cut(s) 43, 278, 1550
Hpy8I GTNNAC 7 cut(s) 30, 75, 380, 472, 617, 1115, 1657
HpyAV CCTTC 5 cut(s) 465, 616, 1253, 1674, 1688
HpyCH4III ACNGT 9 cut(s) 34, 152, 199, 476, 919, 1112, 1420, 1501, 1661
HpyCH4IV ACGT 2 cut(s) 1041, 1578
HpyF10VI GCNNNNNNNGC 5 cut(s) 153, 186, 208, 1604, 1745
HpyF3I CTNAG 7 cut(s) 128, 255, 422, 651, 833, 1087, 1190
HpySE526I ACGT 2 cut(s) 1041, 1578
Hsp92II CATG 6 cut(s) 46, 63, 585, 802, 1357, 1378
HspAI GCGC 1 cut(s) 1065
KpnI GGTACC 2 cut(s) 1374, 1419
Kzo9I GATC 8 cut(s) 181, 274, 280, 394, 801, 945, 1026, 1536
LmnI GCTCC 4 cut(s) 56, 295, 787, 1334
Lsp1109I GCAGC 3 cut(s) 74, 195, 1161
LweI GCATC 4 cut(s) 954, 1581, 1585, 1647
MaeI CTAG 4 cut(s) 432, 695, 1365, 1550
MaeII ACGT 2 cut(s) 1041, 1578
MaeIII GTNAC 6 cut(s) 584, 700, 1229, 1458, 1495, 1791
MalI GATC 8 cut(s) 183, 276, 282, 396, 803, 947, 1028, 1538
MbiI CCGCTC 1 cut(s) 790
MboI GATC 8 cut(s) 181, 274, 280, 394, 801, 945, 1026, 1536
MflI RGATCY 4 cut(s) 394, 945, 1026, 1536
MhlI GDGCHC 4 cut(s) 77, 292, 832, 1331
MlyI GAGTC 2 cut(s) 120, 744
MmeI TCCRAC 4 cut(s) 727, 1004, 1036, 1671
MnlI CCTC 6 cut(s) 334, 596, 1272, 1576, 1728, 1744
MroXI GAANNNNTTC 2 cut(s) 934, 1154
MseI TTAA 4 cut(s) 48, 222, 312, 1038
MslI CAYNNNNRTG 1 cut(s) 1227
MspI CCGG 2 cut(s) 347, 1391
MspR9I CCNGG 1 cut(s) 162
MvaI CCWGG 1 cut(s) 162
MvnI CGCG 1 cut(s) 686
MwoI GCNNNNNNNGC 5 cut(s) 153, 186, 208, 1604, 1745
NcoI CCATGG 1 cut(s) 1374
NdeI CATATG 2 cut(s) 529, 853
NdeII GATC 8 cut(s) 181, 274, 280, 394, 801, 945, 1026, 1536
NlaIII CATG 6 cut(s) 46, 63, 585, 802, 1357, 1378
NlaIV GGNNCC 4 cut(s) 682, 1028, 1372, 1417
NmuCI GTSAC 2 cut(s) 1229, 1495
NspI RCATGY 2 cut(s) 63, 585
NspV TTCGAA 1 cut(s) 540
OliI CACNNNNGTG 1 cut(s) 1227
PaeI GCATGC 1 cut(s) 63
PagI TCATGA 1 cut(s) 42
PceI AGGCCT 1 cut(s) 838
PciI ACATGT 1 cut(s) 581
PdmI GAANNNNTTC 2 cut(s) 934, 1154
PfeI GAWTC 5 cut(s) 80, 114, 262, 407, 1239
PfoI TCCNGGA 1 cut(s) 160
PkrI GCNGC 5 cut(s) 89, 210, 792, 1176, 1741
Ple19I CGATCG 1 cut(s) 184
PleI GAGTC 2 cut(s) 120, 744
PpsI GAGTC 2 cut(s) 120, 744
PscI ACATGT 1 cut(s) 581
PshAI GACNNNNGTC 1 cut(s) 99
Psp124BI GAGCTC 1 cut(s) 832
Psp6I CCWGG 1 cut(s) 160
PspGI CCWGG 1 cut(s) 160
PspN4I GGNNCC 4 cut(s) 682, 1028, 1372, 1417
PspPI GGNCC 4 cut(s) 101, 349, 570, 1336
PsuI RGATCY 4 cut(s) 394, 945, 1026, 1536
PvuI CGATCG 1 cut(s) 184
RsaI GTAC 5 cut(s) 496, 506, 848, 1372, 1417
RsaNI GTAC 5 cut(s) 495, 505, 847, 1371, 1416
RseI CAYNNNNRTG 1 cut(s) 1227
SacI GAGCTC 1 cut(s) 832
SaqAI TTAA 4 cut(s) 48, 222, 312, 1038
SatI GCNGC 5 cut(s) 88, 209, 791, 1175, 1740
Sau3AI GATC 8 cut(s) 181, 274, 280, 394, 801, 945, 1026, 1536
Sau96I GGNCC 4 cut(s) 101, 349, 570, 1336
SchI GAGTC 2 cut(s) 120, 744
ScrFI CCNGG 1 cut(s) 162
SduI GDGCHC 4 cut(s) 77, 292, 832, 1331
SfaNI GCATC 4 cut(s) 954, 1581, 1585, 1647
SfcI CTRYAG 1 cut(s) 823
SfuI TTCGAA 1 cut(s) 540
SinI GGWCC 4 cut(s) 101, 349, 570, 1336
SmiMI CAYNNNNRTG 1 cut(s) 1227
SmlI CTYRAG 2 cut(s) 203, 1402
SmoI CTYRAG 2 cut(s) 203, 1402
SpeI ACTAGT 1 cut(s) 694
SphI GCATGC 1 cut(s) 63
SseBI AGGCCT 1 cut(s) 838
SsiI CCGC 6 cut(s) 90, 104, 684, 790, 868, 1740
SspMI CTAG 4 cut(s) 432, 695, 1365, 1550
SstI GAGCTC 1 cut(s) 832
StuI AGGCCT 1 cut(s) 838
StyD4I CCNGG 1 cut(s) 160
StyI CCWWGG 5 cut(s) 52, 715, 1159, 1332, 1374
TaaI ACNGT 9 cut(s) 34, 152, 199, 476, 919, 1112, 1420, 1501, 1661
TaiI ACGT 2 cut(s) 1044, 1581
TaqI TCGA 7 cut(s) 124, 184, 540, 804, 938, 1251, 1667
TaqII GACCGA 2 cut(s) 789, 1301
TatI WGTACW 1 cut(s) 504
TauI GCSGC 2 cut(s) 793, 1742
TfiI GAWTC 5 cut(s) 80, 114, 262, 407, 1239
Tru1I TTAA 4 cut(s) 48, 222, 312, 1038
Tru9I TTAA 4 cut(s) 48, 222, 312, 1038
TscAI CASTG 6 cut(s) 155, 526, 924, 1122, 1506, 1649
TseFI GTSAC 2 cut(s) 1229, 1495
TseI GCWGC 3 cut(s) 87, 208, 1174
Tsp45I GTSAC 2 cut(s) 1229, 1495
TspDTI ATGAA 8 cut(s) 7, 322, 711, 1020, 1110, 1117, 1235, 1685
TspGWI ACGGA 3 cut(s) 208, 693, 1239
TspRI CASTG 6 cut(s) 155, 526, 924, 1122, 1506, 1649
VneI GTGCAC 1 cut(s) 73
VpaK11BI GGWCC 4 cut(s) 101, 349, 570, 1336
XapI RAATTY 4 cut(s) 809, 881, 1097, 1123
XbaI TCTAGA 1 cut(s) 1549
XceI RCATGY 2 cut(s) 63, 585
XmiI GTMKAC 2 cut(s) 616, 1656
XmnI GAANNNNTTC 2 cut(s) 934, 1154
XspI CTAG 4 cut(s) 432, 695, 1365, 1550
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.