RchiOBHm_Chr1g0328351

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000107
Physical Location & Seq
Forward (+)
17711226 .. 17713580
2355 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ55778

Sequence Viewer

Length: 1908 bp
ATGCAGCAAACTCTCATTTCTTCCTTTTGCTTCATCTTGCTGGCTTTCTCCTCCAAAGTCCTTGGTGAAAAACCGAGGTGTGGGAAACATGGCCCAGATATCAAATTCCCTTTTAGCTTCAAAGGTAGCCAGCACCCAGAAAATTCTGGGTATCCTGGGTTTCTTGTATCCTGCAATGAAAAGCAGGAAACCATTCTTGAGCTGCCAATCCCAGTTAAATTCCCAATCAAAACCATAGACTATGAGAATCAGTATATCCAGCTATATGACCCAGAAAATTGCTTGCTGAGGAAGCTATTGAAAGTCCACAACATGCCAATCTCTCCCTTCAACTACTCAGAATACCAAATGGCTAATATTACCTTATTCAATTGTTCTTCAGCTGAAAGGCAATCATCGTACAATATGAATCCAATCCCCTGCTTTTATGGCCCTGGCTACCAAATCTACTCGGTTTCTTCTTCCCAAAACATTGAGGACTTGCCCCTCCTGTCTTGTACAAAGATGCGTAATCTTTCACTAGTTCCATACAGCCCCTATCCGTATGCACATCCAACTCCAACAAATCTTTATTTGGAATGGTCTGAACCAAATTGTGGACAATGTGAAGCAAACGGCACGACATGTGATTTCAAGAAGAATGGCACCACAAGTACTGAAATTGAATGCCTTCCCAGGAAGAAAGAAGGTTCAGAAACAAAGTTAGTACCCACTGGTGAGTTTTCTAATAGGTTCTTTAGTTTGTTTCATATCTCATATGCATTGTGGATATTTACTCAAGAGTATCACTTTGCAGGTGCATCCCTGGGTTCATTTGTACTCATACTACTTGCAGCTGCAGCTTATCATGTCTATAGTTCTGACAGAAAAGAAAAACAGAATCAATTAAAAATTGAAATTTTTTTAGAGGATTACAGAGCTCTCAAACCAAGCAGATACTCTTATGCAGATATCAAGAGGATTACAAATCAGTTCAAGGACAAATTAGGCCAAGGAGCCTATGGAACTGTTTATAAGGGAAAGCTTTCTTCTGAATGTTTTGTTGCTGTCAAAGTCCTCAATAGTACAAAGGGGGATGGGGAAGAGTTTGTAAATGAAGTGGGAACAATGGGTCATATCCACCATGTCAATGTGGTTCGCTTGGTTGGATTCTGTGCTGATGGGTTTAGACGAGCTCTTGTTTATGACTTCTTACCTAATGGTTCACTGCAAGATTTCATTTCATCAGCAGACAATAACAATTCTTTCCTTGGTTGGGATAAGTTGCAAGATATTGCTCTAGGCATAGCCAAAGGAATTGAATATCTACACCAAGGATGCGATCAACGAATCCTCCATTTCGATATCAAACCCCACAATGTTTTGCTTGACCATAACTTCACCCCAAAGATTTCTGATTTTGGTTTGGCCAAGTTATGTTCCAAGGATCAGAGTATAGTGTCAATGACTACAGCTAGGGGAACGATGGGGTACATTGCACCTGAAGTGTTCTCCAGAAACTTTGGAAATGTATCCTATAAGTCAGATGTGTATAGTTATGGAATGGTACTGCTCGAGATGGTAGGAGGAAGAAAGAACATCAGTTCAACCACAGAGAACACAACTGAAGTTTACTACCCAGAATGGATCTATAATCTACTGGAAGAAGGTGAAGACCTTCGAATCCATGTTGGGGAAGAAGGAGATGCTAAAATTGCAAAGAGACTTGCGATTGTCGGTCTCTGGTGCATCCAATGGCACCCGGTAGATCGTCCTTCTATGAAAGGGGTGGTTCAGATGTTGGAAGGAGGAGAAAACTTAACTATGCCTCCAAATCCTTTTTCCTCTCAAGGTCCTACAGGAACAAGTGCAAGTACACCTGCCAGAAGATTAAACCTTCAACTGGAAGCAATTGCCGAGTTAGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase

Protein Analysis

635

Amino Acids

71.44

Weight (kDa)

6.18

Isoelectric Point (pI)

41.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 25 - 90 5.2e-14 Wall-associated receptor kinase galacturonan-binding
PK_Tyr_Ser-Thr PF07714 324 - 594 1.9e-44 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 325 - 592 5.6e-47 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1014
AarI CACCTGC 2 cut(s) 785, 1867
Acc36I ACCTGC 2 cut(s) 785, 1867
AccB1I GGYRCC 2 cut(s) 644, 1737
AccB7I CCANNNNNTGG 1 cut(s) 596
AclWI GGATC 2 cut(s) 1434, 1634
AcoI YGGCCR 1 cut(s) 1407
AcsI RAATTY 4 cut(s) 104, 142, 218, 897
AcuI CTGAAG 3 cut(s) 363, 1503, 1626
AfaI GTAC 9 cut(s) 401, 499, 655, 708, 819, 1066, 1472, 1548, 1855
AfiI CCNNNNNNNGG 5 cut(s) 80, 596, 1255, 1672, 1882
AflIII ACRYGT 1 cut(s) 623
AhlI ACTAGT 1 cut(s) 520
AjnI CCWGG 4 cut(s) 154, 433, 674, 804
AjuI GAANNNNNNNTTGG 2 cut(s) 1804, 1836
Alw21I GWGCWC 2 cut(s) 922, 1177
Alw26I GTCTC 2 cut(s) 1696, 1724
AlwI GGATC 2 cut(s) 1434, 1634
Ama87I CYCGRG 1 cut(s) 1553
AoxI GGCC 4 cut(s) 91, 430, 988, 1407
ApeKI GCWGC 5 cut(s) 4, 202, 833, 836, 839
ApoI RAATTY 4 cut(s) 104, 142, 218, 897
Asp700I GAANNNNTTC 4 cut(s) 192, 669, 1024, 1656
AspS9I GGNCC 3 cut(s) 92, 431, 1832
AsuC2I CCSGG 1 cut(s) 1742
AsuHPI GGTGA 4 cut(s) 77, 728, 1372, 1661
AsuII TTCGAA 1 cut(s) 1660
AvaI CYCGRG 1 cut(s) 1553
AvaII GGWCC 1 cut(s) 1832
BalI TGGCCA 1 cut(s) 1409
BanI GGYRCC 2 cut(s) 644, 1737
BanII GRGCYC 2 cut(s) 922, 1177
BbsI GAAGAC 1 cut(s) 1659
Bbv12I GWGCWC 2 cut(s) 922, 1177
BbvCI CCTCAGC 1 cut(s) 287
BbvI GCAGC 5 cut(s) 16, 189, 823, 845, 851
BccI CCATC 4 cut(s) 1070, 1154, 1459, 1552
BceAI ACGGC 1 cut(s) 631
BciT130I CCWGG 4 cut(s) 156, 435, 676, 806
BciVI GTATCC 3 cut(s) 162, 178, 1522
BcnI CCSGG 1 cut(s) 1742
BcoDI GTCTC 2 cut(s) 1696, 1724
BcuI ACTAGT 1 cut(s) 520
BfaI CTAG 3 cut(s) 521, 1280, 1455
BfmI CTRYAG 4 cut(s) 837, 853, 1449, 1836
BfuAI ACCTGC 2 cut(s) 785, 1867
BfuI GTATCC 3 cut(s) 162, 178, 1522
BisI GCNGC 5 cut(s) 5, 203, 834, 837, 840
BlsI GCNGC 5 cut(s) 6, 204, 835, 838, 841
BmcAI AGTACT 1 cut(s) 655
Bme1390I CCNGG 5 cut(s) 156, 435, 676, 806, 1742
Bme18I GGWCC 1 cut(s) 1832
BmeT110I CYCGRG 1 cut(s) 1553
BmgT120I GGNCC 3 cut(s) 92, 431, 1832
BmiI GGNNCC 3 cut(s) 646, 997, 1739
BmrFI CCNGG 5 cut(s) 156, 435, 676, 806, 1742
BmrI ACTGGG 1 cut(s) 206
BmsI GCATC 5 cut(s) 495, 809, 1307, 1675, 1737
BmuI ACTGGG 1 cut(s) 206
BpiI GAAGAC 1 cut(s) 1659
BpmI CTGGAG 1 cut(s) 1477
Bpu10I CCTNAGC 1 cut(s) 287
Bpu14I TTCGAA 1 cut(s) 1660
BpuEI CTTGAG 3 cut(s) 218, 762, 1812
BpuMI CCSGG 1 cut(s) 1742
BsaI GGTCTC 1 cut(s) 1724
BsaXI ACNNNNNCTCC 4 cut(s) 1317, 1347, 1792, 1822
Bsc4I CCNNNNNNNGG 5 cut(s) 80, 596, 1255, 1672, 1882
Bse1I ACTGG 4 cut(s) 212, 718, 1644, 1887
Bse3DI GCAATG 2 cut(s) 181, 1473
BseBI CCWGG 4 cut(s) 156, 435, 676, 806
BseGI GGATG 5 cut(s) 550, 800, 1081, 1322, 1728
BseLI CCNNNNNNNGG 5 cut(s) 80, 596, 1255, 1672, 1882
BseMI GCAATG 2 cut(s) 181, 1473
BseMII CTCAG 2 cut(s) 278, 351
BseNI ACTGG 4 cut(s) 212, 718, 1644, 1887
BseRI GAGGAG 2 cut(s) 40, 1803
BseXI GCAGC 5 cut(s) 16, 189, 823, 845, 851
BshFI GGCC 4 cut(s) 93, 432, 990, 1409
BshNI GGYRCC 2 cut(s) 644, 1737
BsiHKAI GWGCWC 2 cut(s) 922, 1177
BsiHKCI CYCGRG 1 cut(s) 1553
BsiSI CCGG 1 cut(s) 1742
BslI CCNNNNNNNGG 5 cut(s) 80, 596, 1255, 1672, 1882
BsmAI GTCTC 2 cut(s) 1696, 1724
BsmI GAATGC 1 cut(s) 671
BsnI GGCC 4 cut(s) 93, 432, 990, 1409
Bso31I GGTCTC 1 cut(s) 1724
BsoBI CYCGRG 1 cut(s) 1553
Bsp119I TTCGAA 1 cut(s) 1660
Bsp1286I GDGCHC 2 cut(s) 922, 1177
Bsp1407I TGTACA 1 cut(s) 497
Bsp143I GATC 4 cut(s) 1321, 1426, 1626, 1747
BspANI GGCC 4 cut(s) 93, 432, 990, 1409
BspCNI CTCAG 2 cut(s) 279, 350
BspLI GGNNCC 3 cut(s) 646, 997, 1739
BspMAI CTGCAG 1 cut(s) 841
BspMI ACCTGC 2 cut(s) 785, 1867
BspPI GGATC 2 cut(s) 1434, 1634
BspT104I TTCGAA 1 cut(s) 1660
BspT107I GGYRCC 2 cut(s) 644, 1737
BspTNI GGTCTC 1 cut(s) 1724
BsrDI GCAATG 2 cut(s) 181, 1473
BsrGI TGTACA 1 cut(s) 497
BsrI ACTGG 4 cut(s) 212, 718, 1644, 1887
BssMI GATC 4 cut(s) 1321, 1426, 1626, 1747
BssT1I CCWWGG 5 cut(s) 61, 991, 1249, 1312, 1422
Bst2UI CCWGG 4 cut(s) 156, 435, 676, 806
Bst4CI ACNGT 1 cut(s) 1009
Bst6I CTCTTC 1 cut(s) 1077
BstAUI TGTACA 1 cut(s) 497
BstBI TTCGAA 1 cut(s) 1660
BstC8I GCNNGC 3 cut(s) 42, 131, 284
BstDEI CTNAG 2 cut(s) 287, 337
BstF5I GGATG 5 cut(s) 550, 800, 1081, 1322, 1728
BstKTI GATC 4 cut(s) 1324, 1429, 1629, 1750
BstMAI GTCTC 2 cut(s) 1696, 1724
BstMBI GATC 4 cut(s) 1321, 1426, 1626, 1747
BstMWI GCNNNNNNNGC 4 cut(s) 292, 429, 839, 1694
BstNI CCWGG 4 cut(s) 156, 435, 676, 806
BstNSI RCATGY 2 cut(s) 316, 627
BstSCI CCNGG 5 cut(s) 154, 433, 674, 804, 1740
BstSFI CTRYAG 4 cut(s) 837, 853, 1449, 1836
BstV1I GCAGC 5 cut(s) 16, 189, 823, 845, 851
BstV2I GAAGAC 1 cut(s) 1659
BstX2I RGATCY 1 cut(s) 1626
BstYI RGATCY 1 cut(s) 1626
BsuI GTATCC 3 cut(s) 162, 178, 1522
BsuRI GGCC 4 cut(s) 93, 432, 990, 1409
BtsCI GGATG 5 cut(s) 550, 800, 1081, 1322, 1728
BtsI GCAGTG 1 cut(s) 1205
BtsIMutI CAGTG 2 cut(s) 711, 1205
BveI ACCTGC 2 cut(s) 785, 1867
Cac8I GCNNGC 3 cut(s) 42, 131, 284
Cfr13I GGNCC 3 cut(s) 92, 431, 1832
Csp6I GTAC 9 cut(s) 400, 498, 654, 707, 818, 1065, 1471, 1547, 1854
CviAII CATG 6 cut(s) 89, 313, 624, 848, 1124, 1667
CviQI GTAC 9 cut(s) 400, 498, 654, 707, 818, 1065, 1471, 1547, 1854
DdeI CTNAG 2 cut(s) 287, 337
DpnI GATC 4 cut(s) 1323, 1428, 1628, 1749
DpnII GATC 4 cut(s) 1321, 1426, 1626, 1747
EaeI YGGCCR 1 cut(s) 1407
Eam1104I CTCTTC 1 cut(s) 1077
EarI CTCTTC 1 cut(s) 1077
Ecl136II GAGCTC 2 cut(s) 920, 1175
Eco130I CCWWGG 5 cut(s) 61, 991, 1249, 1312, 1422
Eco24I GRGCYC 2 cut(s) 922, 1177
Eco31I GGTCTC 1 cut(s) 1724
Eco32I GATATC 3 cut(s) 100, 952, 1345
Eco47I GGWCC 1 cut(s) 1832
Eco53kI GAGCTC 2 cut(s) 920, 1175
Eco57I CTGAAG 3 cut(s) 363, 1503, 1626
Eco88I CYCGRG 1 cut(s) 1553
EcoICRI GAGCTC 2 cut(s) 920, 1175
EcoO109I RGGNCCY 1 cut(s) 1832
EcoRII CCWGG 4 cut(s) 154, 433, 674, 804
EcoRV GATATC 3 cut(s) 100, 952, 1345
EcoT14I CCWWGG 5 cut(s) 61, 991, 1249, 1312, 1422
EcoT22I ATGCAT 1 cut(s) 763
EcoT38I GRGCYC 2 cut(s) 922, 1177
ErhI CCWWGG 5 cut(s) 61, 991, 1249, 1312, 1422
FaeI CATG 6 cut(s) 92, 316, 627, 851, 1127, 1670
FatI CATG 6 cut(s) 88, 312, 623, 847, 1123, 1666
FauNDI CATATG 1 cut(s) 757
Fnu4HI GCNGC 5 cut(s) 5, 203, 834, 837, 840
FokI GGATG 5 cut(s) 537, 787, 1088, 1329, 1715
FriOI GRGCYC 2 cut(s) 922, 1177
Fsp4HI GCNGC 5 cut(s) 5, 203, 834, 837, 840
FspBI CTAG 3 cut(s) 521, 1280, 1455
GluI GCNGC 5 cut(s) 5, 203, 834, 837, 840
GsuI CTGGAG 1 cut(s) 1477
HaeIII GGCC 4 cut(s) 93, 432, 990, 1409
HapII CCGG 1 cut(s) 1742
Hin1II CATG 6 cut(s) 92, 316, 627, 851, 1127, 1670
HindIII AAGCTT 1 cut(s) 1022
HinfI GANTC 6 cut(s) 247, 409, 880, 1149, 1329, 1662
HpaII CCGG 1 cut(s) 1742
HphI GGTGA 4 cut(s) 77, 728, 1372, 1661
Hpy166II GTNNAC 5 cut(s) 307, 599, 1205, 1612, 1856
Hpy188I TCNGA 9 cut(s) 340, 586, 694, 862, 1033, 1396, 1431, 1525, 1776
Hpy188III TCNNGA 6 cut(s) 197, 634, 779, 955, 1494, 1555
Hpy8I GTNNAC 5 cut(s) 307, 599, 1205, 1612, 1856
HpyAV CCTTC 9 cut(s) 337, 680, 680, 1640, 1667, 1673, 1764, 1778, 1886
HpyCH4III ACNGT 1 cut(s) 1009
HpyF10VI GCNNNNNNNGC 4 cut(s) 292, 429, 839, 1694
HpyF3I CTNAG 2 cut(s) 287, 337
Hsp92II CATG 6 cut(s) 92, 316, 627, 851, 1127, 1670
Kzo9I GATC 4 cut(s) 1321, 1426, 1626, 1747
LmnI GCTCC 1 cut(s) 995
Lsp1109I GCAGC 5 cut(s) 16, 189, 823, 845, 851
LweI GCATC 5 cut(s) 495, 809, 1307, 1675, 1737
MaeI CTAG 3 cut(s) 521, 1280, 1455
MalI GATC 4 cut(s) 1323, 1428, 1628, 1749
MboI GATC 4 cut(s) 1321, 1426, 1626, 1747
MfeI CAATTG 2 cut(s) 370, 1890
MflI RGATCY 1 cut(s) 1626
MhlI GDGCHC 2 cut(s) 922, 1177
MlsI TGGCCA 1 cut(s) 1409
MluNI TGGCCA 1 cut(s) 1409
MmeI TCCRAC 4 cut(s) 578, 584, 1126, 1761
Mox20I TGGCCA 1 cut(s) 1409
Mph1103I ATGCAT 1 cut(s) 763
MroXI GAANNNNTTC 4 cut(s) 192, 669, 1024, 1656
MscI TGGCCA 1 cut(s) 1409
MseI TTAA 4 cut(s) 216, 887, 1799, 1871
MslI CAYNNNNRTG 1 cut(s) 1128
Msp20I TGGCCA 1 cut(s) 1409
MspA1I CMGCKG 2 cut(s) 383, 836
MspI CCGG 1 cut(s) 1742
MspR9I CCNGG 5 cut(s) 156, 435, 676, 806, 1742
MunI CAATTG 2 cut(s) 370, 1890
Mva1269I GAATGC 1 cut(s) 671
MvaI CCWGG 4 cut(s) 156, 435, 676, 806
MwoI GCNNNNNNNGC 4 cut(s) 292, 429, 839, 1694
NciI CCSGG 1 cut(s) 1742
NdeI CATATG 1 cut(s) 757
NdeII GATC 4 cut(s) 1321, 1426, 1626, 1747
NlaIII CATG 6 cut(s) 92, 316, 627, 851, 1127, 1670
NlaIV GGNNCC 3 cut(s) 646, 997, 1739
NsiI ATGCAT 1 cut(s) 763
NspI RCATGY 2 cut(s) 316, 627
NspV TTCGAA 1 cut(s) 1660
PaeR7I CTCGAG 1 cut(s) 1553
PaqCI CACCTGC 2 cut(s) 785, 1867
PasI CCCWGGG 1 cut(s) 805
PciI ACATGT 1 cut(s) 623
PctI GAATGC 1 cut(s) 671
PdmI GAANNNNTTC 4 cut(s) 192, 669, 1024, 1656
PfeI GAWTC 6 cut(s) 247, 409, 880, 1149, 1329, 1662
PflMI CCANNNNNTGG 1 cut(s) 596
PkrI GCNGC 5 cut(s) 6, 204, 835, 838, 841
PpuMI RGGWCCY 1 cut(s) 1832
PscI ACATGT 1 cut(s) 623
PsiI TTATAA 1 cut(s) 1014
Psp124BI GAGCTC 2 cut(s) 922, 1177
Psp5II RGGWCCY 1 cut(s) 1832
Psp6I CCWGG 4 cut(s) 154, 433, 674, 804
PspGI CCWGG 4 cut(s) 154, 433, 674, 804
PspN4I GGNNCC 3 cut(s) 646, 997, 1739
PspPI GGNCC 3 cut(s) 92, 431, 1832
PspPPI RGGWCCY 1 cut(s) 1832
PstI CTGCAG 1 cut(s) 841
PsuI RGATCY 1 cut(s) 1626
PvuII CAGCTG 2 cut(s) 383, 836
RsaI GTAC 9 cut(s) 401, 499, 655, 708, 819, 1066, 1472, 1548, 1855
RsaNI GTAC 9 cut(s) 400, 498, 654, 707, 818, 1065, 1471, 1547, 1854
RseI CAYNNNNRTG 1 cut(s) 1128
SacI GAGCTC 2 cut(s) 922, 1177
SaqAI TTAA 4 cut(s) 216, 887, 1799, 1871
SatI GCNGC 5 cut(s) 5, 203, 834, 837, 840
Sau3AI GATC 4 cut(s) 1321, 1426, 1626, 1747
Sau96I GGNCC 3 cut(s) 92, 431, 1832
ScaI AGTACT 1 cut(s) 655
ScrFI CCNGG 5 cut(s) 156, 435, 676, 806, 1742
SduI GDGCHC 2 cut(s) 922, 1177
SfaNI GCATC 5 cut(s) 495, 809, 1307, 1675, 1737
SfcI CTRYAG 4 cut(s) 837, 853, 1449, 1836
Sfr274I CTCGAG 1 cut(s) 1553
SfuI TTCGAA 1 cut(s) 1660
SinI GGWCC 1 cut(s) 1832
SlaI CTCGAG 1 cut(s) 1553
SmiMI CAYNNNNRTG 1 cut(s) 1128
SmlI CTYRAG 4 cut(s) 197, 777, 1553, 1827
SmoI CTYRAG 4 cut(s) 197, 777, 1553, 1827
SpeI ACTAGT 1 cut(s) 520
SspI AATATT 1 cut(s) 358
SspMI CTAG 3 cut(s) 521, 1280, 1455
SstI GAGCTC 2 cut(s) 922, 1177
StyD4I CCNGG 5 cut(s) 154, 433, 674, 804, 1740
StyI CCWWGG 5 cut(s) 61, 991, 1249, 1312, 1422
TaaI ACNGT 1 cut(s) 1009
TaqI TCGA 3 cut(s) 1341, 1554, 1660
TaqII GACCGA 1 cut(s) 1706
TatI WGTACW 5 cut(s) 497, 653, 817, 1064, 1853
TfiI GAWTC 6 cut(s) 247, 409, 880, 1149, 1329, 1662
Tru1I TTAA 4 cut(s) 216, 887, 1799, 1871
Tru9I TTAA 4 cut(s) 216, 887, 1799, 1871
TscAI CASTG 2 cut(s) 718, 1212
TseI GCWGC 5 cut(s) 4, 202, 833, 836, 839
TspDTI ATGAA 9 cut(s) 22, 192, 422, 737, 801, 1110, 1207, 1212, 1775
TspGWI ACGGA 1 cut(s) 531
TspRI CASTG 2 cut(s) 718, 1212
Van91I CCANNNNNTGG 1 cut(s) 596
VpaK11BI GGWCC 1 cut(s) 1832
XapI RAATTY 4 cut(s) 104, 142, 218, 897
XceI RCATGY 2 cut(s) 316, 627
XcmI CCANNNNNNNNNTGG 1 cut(s) 998
XhoI CTCGAG 1 cut(s) 1553
XmnI GAANNNNTTC 4 cut(s) 192, 669, 1024, 1656
XspI CTAG 3 cut(s) 521, 1280, 1455
ZrmI AGTACT 1 cut(s) 655
Zsp2I ATGCAT 1 cut(s) 763
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.