Rroxscaffold_4G00317440

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000107
Physical Location & Seq
Reverse (-)
42692433 .. 42695022
2590 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00317440.1

Sequence Viewer

Length: 1491 bp
ATGTCAATCTCTCCCTTCAACTACTCAGAATACCAAATGAATAATATTACCTTCTTCAATTGTTCTTCAGCTGAAATGGAATCGATGTACAATCCAGTCCCCTGCTTGAGTGGTCCTGGCTACCAAATTTATTCGCTTTATTCAGGGGGTTTAATCGAGGACACTCCCCTTCTGTCTTGTACAAAGATGCGTAATCTTTCATTGTTTCCATACGAGCCTTATCCACGTCCAATTCTTTATTTGGAATGGTCTGAACCAAATTGTAAACCATGTGAAGCACATGGCAAGATATGTGGATCGAAGAACAATGCCACCACAAGTACTGAAATTGAATGTTTTTATAGGAAAGGAGGTTCACAAAAACAGTTAGTAGCAACAGGTGCATCCCTGGGTTCATTTGTACTCGTACTACTTGTCGTTGCAGTTTATCATGTCTACAGTTCTGACAGGAAAGAAAAAGAGAATCAATTAAAACTTGAGGTATTTTTAGAGGATTACAGAGCACTCAAACCAAGCAGATATTCTTATGCCGATATTAAGAGGATTACAAATCAATTCAAGGAAAAATTAGGCCAAGGAGCCTATGGGACTGTTTTTAAGGGAAAACTTTCTGCTGAATGTTTTGTTGCGGTGAAAGTCCTCAATAGTACTAAGGGGAATGGGGAAGAGTTTGTAAATGAAGTAGGAACAATGGGACATATCCACCATGTCAATGTGGTTCGATTGGTTGGATTCTGTGCGGATGGATTTAGACGAGCTCTTGTTTATGACTTCTTACCTAATGGTTCACTACAAGATTTCATTTCATCAGCAGACAATAACAATTATTTACTTGGTTGGGGTAAGTTGCAAGATATTTCTCTTGGAATAGCAAAAGGAATTGAATATCTGCACCAAGGATGCAATCAACGGATCCTACATTTTGATATCAAACCCCATAATGTCTTGCTAGACCATAACTTCAACGCAAAGATTTCTGATTTTGGTTTGGCCAAGTTATGTTCCAAGGATCAAAGTATAGTGTCAATGACTACTGCCAGGGGAACTATCGGGTACATTGCACCTGAAGTGTTCTCCAGGAACTTCGGAAATGTGTCCTATAAGTCAGATGTCTATAGCTATGGAATGGTACTGCTTGAGATTGTAGGAGGGAGAAAGAACATTGGTTCAACCATAGAGAACACCAATGAAGTTTACTACCCAGAATGGATCTATAATCTTCTAGAAGAAAAAGATGACCTACCTATCAATGTGGGGGAAGAAGGAGATGCTAAAATTGCAAAGAGACTTGCGATTGTAGGTCTCTGGTGCATTCAATGGCACCCTGCTGATCGTCCTTCTATGCAAGGGGTGGTTCAGATGTTGGAAGGAGGAGAAAACTTAATCATGCCTCCAAATCCTTTTGCCTCTCAGGGTCCAGCAGGAACAAATACAAGTACACCTTCAAGAAATTTAAATCTCCAACTAGAAGCAATTCCTGAGTTAGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase

Protein Analysis

496

Amino Acids

55.29

Weight (kDa)

5.88

Isoelectric Point (pI)

36.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 185 - 455 4.6e-45 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 186 - 453 1.1e-45 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1320
AccI GTMKAC 1 cut(s) 435
AciI CCGC 2 cut(s) 629, 740
AclWI GGATC 5 cut(s) 304, 907, 920, 1017, 1217
AcoI YGGCCR 1 cut(s) 990
AcsI RAATTY 2 cut(s) 126, 1450
AcuI CTGAAG 2 cut(s) 51, 1086
AfaI GTAC 9 cut(s) 89, 181, 322, 402, 408, 649, 1055, 1131, 1438
AgsI TTSAA 9 cut(s) 19, 58, 332, 559, 884, 964, 1170, 1316, 1446
AjiI CACGTC 1 cut(s) 227
AjnI CCWGG 4 cut(s) 115, 387, 1037, 1076
AjuI GAANNNNNNNTTGG 2 cut(s) 505, 537
AloI GAACNNNNNNTCC 2 cut(s) 337, 369
AluBI AGCT 3 cut(s) 71, 758, 1119
AluI AGCT 3 cut(s) 71, 758, 1119
Alw21I GWGCWC 2 cut(s) 505, 760
Alw26I GTCTC 2 cut(s) 1279, 1307
AlwI GGATC 5 cut(s) 304, 907, 920, 1017, 1217
AoxI GGCC 2 cut(s) 571, 990
ApoI RAATTY 2 cut(s) 126, 1450
Asp700I GAANNNNTTC 2 cut(s) 607, 1473
AspS9I GGNCC 2 cut(s) 113, 1415
AsuHPI GGTGA 1 cut(s) 643
AvaII GGWCC 2 cut(s) 113, 1415
BalI TGGCCA 1 cut(s) 992
BamHI GGATCC 1 cut(s) 912
BanI GGYRCC 1 cut(s) 1320
BanII GRGCYC 1 cut(s) 760
Bbv12I GWGCWC 2 cut(s) 505, 760
BccI CCATC 1 cut(s) 737
BciT130I CCWGG 4 cut(s) 117, 389, 1039, 1078
BcoDI GTCTC 2 cut(s) 1279, 1307
BfaI CTAG 3 cut(s) 950, 1223, 1466
BfmI CTRYAG 2 cut(s) 436, 1114
BmcAI AGTACT 2 cut(s) 322, 649
Bme1390I CCNGG 4 cut(s) 117, 389, 1039, 1078
Bme18I GGWCC 2 cut(s) 113, 1415
BmgBI CACGTC 1 cut(s) 227
BmgT120I GGNCC 2 cut(s) 113, 1415
BmiI GGNNCC 4 cut(s) 580, 914, 1322, 1416
BmrFI CCNGG 4 cut(s) 117, 389, 1039, 1078
BmsI GCATC 4 cut(s) 177, 392, 890, 1258
BpmI CTGGAG 1 cut(s) 1060
BpuEI CTTGAG 3 cut(s) 127, 497, 1157
Bsa29I ATCGAT 1 cut(s) 83
BsaI GGTCTC 1 cut(s) 1307
BsaJI CCNNGG 6 cut(s) 387, 388, 574, 895, 1005, 1038
Bse1I ACTGG 1 cut(s) 95
Bse3DI GCAATG 1 cut(s) 1056
BseBI CCWGG 4 cut(s) 117, 389, 1039, 1078
BseCI ATCGAT 1 cut(s) 83
BseDI CCNNGG 6 cut(s) 387, 388, 574, 895, 1005, 1038
BseGI GGATG 3 cut(s) 383, 748, 905
BseMI GCAATG 1 cut(s) 1056
BseMII CTCAG 3 cut(s) 39, 1424, 1470
BseNI ACTGG 1 cut(s) 95
BseRI GAGGAG 1 cut(s) 1386
BsgI GTGCAG 1 cut(s) 875
BshFI GGCC 2 cut(s) 573, 992
BshNI GGYRCC 1 cut(s) 1320
BshVI ATCGAT 1 cut(s) 83
BsiHKAI GWGCWC 2 cut(s) 505, 760
BslFI GGGAC 3 cut(s) 83, 601, 708
BsmAI GTCTC 2 cut(s) 1279, 1307
BsmFI GGGAC 3 cut(s) 83, 601, 708
BsmI GAATGC 1 cut(s) 1311
BsnI GGCC 2 cut(s) 573, 992
Bso31I GGTCTC 1 cut(s) 1307
Bsp1286I GDGCHC 2 cut(s) 505, 760
Bsp1407I TGTACA 2 cut(s) 87, 179
Bsp143I GATC 5 cut(s) 296, 912, 1009, 1209, 1330
BspACI CCGC 2 cut(s) 629, 740
BspANI GGCC 2 cut(s) 573, 992
BspCNI CTCAG 3 cut(s) 38, 1423, 1471
BspDI ATCGAT 1 cut(s) 83
BspLI GGNNCC 4 cut(s) 580, 914, 1322, 1416
BspPI GGATC 5 cut(s) 304, 907, 920, 1017, 1217
BspT107I GGYRCC 1 cut(s) 1320
BspTNI GGTCTC 1 cut(s) 1307
BsrDI GCAATG 1 cut(s) 1056
BsrGI TGTACA 2 cut(s) 87, 179
BsrI ACTGG 1 cut(s) 95
BssECI CCNNGG 6 cut(s) 387, 388, 574, 895, 1005, 1038
BssMI GATC 5 cut(s) 296, 912, 1009, 1209, 1330
BssT1I CCWWGG 3 cut(s) 574, 895, 1005
Bst2UI CCWGG 4 cut(s) 117, 389, 1039, 1078
Bst4CI ACNGT 3 cut(s) 366, 440, 592
Bst6I CTCTTC 1 cut(s) 660
BstAPI GCANNNNNTGC 1 cut(s) 380
BstAUI TGTACA 2 cut(s) 87, 179
BstDEI CTNAG 4 cut(s) 25, 651, 1410, 1479
BstF5I GGATG 3 cut(s) 383, 748, 905
BstKTI GATC 5 cut(s) 299, 915, 1012, 1212, 1333
BstMAI GTCTC 2 cut(s) 1279, 1307
BstMBI GATC 5 cut(s) 296, 912, 1009, 1209, 1330
BstMWI GCNNNNNNNGC 2 cut(s) 380, 1277
BstNI CCWGG 4 cut(s) 117, 389, 1039, 1078
BstSCI CCNGG 4 cut(s) 115, 387, 1037, 1076
BstSFI CTRYAG 2 cut(s) 436, 1114
BstX2I RGATCY 2 cut(s) 912, 1209
BstYI RGATCY 2 cut(s) 912, 1209
Bsu15I ATCGAT 1 cut(s) 83
BsuRI GGCC 2 cut(s) 573, 992
BsuTUI ATCGAT 1 cut(s) 83
BtrI CACGTC 1 cut(s) 227
BtsCI GGATG 3 cut(s) 383, 748, 905
Cfr13I GGNCC 2 cut(s) 113, 1415
ClaI ATCGAT 1 cut(s) 83
Csp6I GTAC 9 cut(s) 88, 180, 321, 401, 407, 648, 1054, 1130, 1437
CspCI CAANNNNNGTGG 2 cut(s) 274, 309
CviAII CATG 5 cut(s) 270, 281, 431, 707, 1387
CviJI RGCY 8 cut(s) 71, 120, 217, 573, 581, 758, 992, 1119
CviKI_1 RGCY 8 cut(s) 71, 120, 217, 573, 581, 758, 992, 1119
CviQI GTAC 9 cut(s) 88, 180, 321, 401, 407, 648, 1054, 1130, 1437
DdeI CTNAG 4 cut(s) 25, 651, 1410, 1479
DpnI GATC 5 cut(s) 298, 914, 1011, 1211, 1332
DpnII GATC 5 cut(s) 296, 912, 1009, 1209, 1330
DraI TTTAAA 1 cut(s) 1455
EaeI YGGCCR 1 cut(s) 990
Eam1104I CTCTTC 1 cut(s) 660
EarI CTCTTC 1 cut(s) 660
Ecl136II GAGCTC 1 cut(s) 758
Eco130I CCWWGG 3 cut(s) 574, 895, 1005
Eco24I GRGCYC 1 cut(s) 760
Eco31I GGTCTC 1 cut(s) 1307
Eco32I GATATC 1 cut(s) 928
Eco47I GGWCC 2 cut(s) 113, 1415
Eco53kI GAGCTC 1 cut(s) 758
Eco57I CTGAAG 2 cut(s) 51, 1086
EcoICRI GAGCTC 1 cut(s) 758
EcoRII CCWGG 4 cut(s) 115, 387, 1037, 1076
EcoRV GATATC 1 cut(s) 928
EcoT14I CCWWGG 3 cut(s) 574, 895, 1005
EcoT38I GRGCYC 1 cut(s) 760
ErhI CCWWGG 3 cut(s) 574, 895, 1005
FaeI CATG 5 cut(s) 273, 284, 434, 710, 1390
FalI AAGNNNNNCTT 2 cut(s) 1426, 1458
FaqI GGGAC 3 cut(s) 83, 601, 708
FatI CATG 5 cut(s) 269, 280, 430, 706, 1386
FblI GTMKAC 1 cut(s) 435
FokI GGATG 3 cut(s) 370, 755, 912
FriOI GRGCYC 1 cut(s) 760
FspBI CTAG 3 cut(s) 950, 1223, 1466
GsuI CTGGAG 1 cut(s) 1060
HaeIII GGCC 2 cut(s) 573, 992
Hin1II CATG 5 cut(s) 273, 284, 434, 710, 1390
HinfI GANTC 3 cut(s) 80, 463, 732
HphI GGTGA 1 cut(s) 643
Hpy166II GTNNAC 6 cut(s) 266, 356, 436, 788, 1195, 1439
Hpy188I TCNGA 7 cut(s) 28, 253, 445, 979, 1088, 1108, 1359
Hpy188III TCNNGA 3 cut(s) 1223, 1446, 1478
Hpy8I GTNNAC 6 cut(s) 266, 356, 436, 788, 1195, 1439
HpyAV CCTTC 7 cut(s) 25, 61, 179, 1256, 1347, 1361, 1452
HpyCH4III ACNGT 3 cut(s) 366, 440, 592
HpyCH4IV ACGT 1 cut(s) 226
HpyCH4V TGCA 9 cut(s) 383, 422, 850, 892, 903, 1061, 1280, 1311, 1345
HpyF10VI GCNNNNNNNGC 2 cut(s) 380, 1277
HpyF3I CTNAG 4 cut(s) 25, 651, 1410, 1479
HpySE526I ACGT 1 cut(s) 226
Hsp92II CATG 5 cut(s) 273, 284, 434, 710, 1390
Kzo9I GATC 5 cut(s) 296, 912, 1009, 1209, 1330
LmnI GCTCC 1 cut(s) 578
LweI GCATC 4 cut(s) 177, 392, 890, 1258
MaeI CTAG 3 cut(s) 950, 1223, 1466
MaeII ACGT 1 cut(s) 226
MalI GATC 5 cut(s) 298, 914, 1011, 1211, 1332
MboI GATC 5 cut(s) 296, 912, 1009, 1209, 1330
MboII GAAGA 7 cut(s) 46, 57, 313, 677, 1211, 1238, 1271
MfeI CAATTG 1 cut(s) 58
MflI RGATCY 2 cut(s) 912, 1209
MhlI GDGCHC 2 cut(s) 505, 760
MlsI TGGCCA 1 cut(s) 992
MluNI TGGCCA 1 cut(s) 992
MmeI TCCRAC 3 cut(s) 709, 1344, 1486
Mox20I TGGCCA 1 cut(s) 992
MroXI GAANNNNTTC 2 cut(s) 607, 1473
MscI TGGCCA 1 cut(s) 992
MseI TTAA 6 cut(s) 152, 470, 537, 597, 1382, 1454
MslI CAYNNNNRTG 1 cut(s) 711
Msp20I TGGCCA 1 cut(s) 992
MspA1I CMGCKG 1 cut(s) 71
MspR9I CCNGG 4 cut(s) 117, 389, 1039, 1078
MunI CAATTG 1 cut(s) 58
Mva1269I GAATGC 1 cut(s) 1311
MvaI CCWGG 4 cut(s) 117, 389, 1039, 1078
MwoI GCNNNNNNNGC 2 cut(s) 380, 1277
NdeII GATC 5 cut(s) 296, 912, 1009, 1209, 1330
NlaIII CATG 5 cut(s) 273, 284, 434, 710, 1390
NlaIV GGNNCC 4 cut(s) 580, 914, 1322, 1416
PasI CCCWGGG 1 cut(s) 388
PctI GAATGC 1 cut(s) 1311
PdmI GAANNNNTTC 2 cut(s) 607, 1473
PfeI GAWTC 3 cut(s) 80, 463, 732
PfoI TCCNGGA 1 cut(s) 1076
Psp124BI GAGCTC 1 cut(s) 760
Psp6I CCWGG 4 cut(s) 115, 387, 1037, 1076
PspGI CCWGG 4 cut(s) 115, 387, 1037, 1076
PspN4I GGNNCC 4 cut(s) 580, 914, 1322, 1416
PspPI GGNCC 2 cut(s) 113, 1415
PsuI RGATCY 2 cut(s) 912, 1209
PvuII CAGCTG 1 cut(s) 71
RsaI GTAC 9 cut(s) 89, 181, 322, 402, 408, 649, 1055, 1131, 1438
RsaNI GTAC 9 cut(s) 88, 180, 321, 401, 407, 648, 1054, 1130, 1437
RseI CAYNNNNRTG 1 cut(s) 711
SacI GAGCTC 1 cut(s) 760
SaqAI TTAA 6 cut(s) 152, 470, 537, 597, 1382, 1454
Sau3AI GATC 5 cut(s) 296, 912, 1009, 1209, 1330
Sau96I GGNCC 2 cut(s) 113, 1415
ScaI AGTACT 2 cut(s) 322, 649
ScrFI CCNGG 4 cut(s) 117, 389, 1039, 1078
SduI GDGCHC 2 cut(s) 505, 760
SfaNI GCATC 4 cut(s) 177, 392, 890, 1258
SfcI CTRYAG 2 cut(s) 436, 1114
SinI GGWCC 2 cut(s) 113, 1415
SmiI ATTTAAAT 1 cut(s) 1455
SmiMI CAYNNNNRTG 1 cut(s) 711
SmlI CTYRAG 3 cut(s) 106, 476, 1136
SmoI CTYRAG 3 cut(s) 106, 476, 1136
SsiI CCGC 2 cut(s) 629, 740
SspI AATATT 1 cut(s) 46
SspMI CTAG 3 cut(s) 950, 1223, 1466
SstI GAGCTC 1 cut(s) 760
StyD4I CCNGG 4 cut(s) 115, 387, 1037, 1076
StyI CCWWGG 3 cut(s) 574, 895, 1005
SwaI ATTTAAAT 1 cut(s) 1455
TaaI ACNGT 3 cut(s) 366, 440, 592
TaiI ACGT 1 cut(s) 229
TaqI TCGA 4 cut(s) 83, 156, 299, 721
TatI WGTACW 6 cut(s) 87, 179, 320, 400, 647, 1436
TfiI GAWTC 3 cut(s) 80, 463, 732
Tru1I TTAA 6 cut(s) 152, 470, 537, 597, 1382, 1454
Tru9I TTAA 6 cut(s) 152, 470, 537, 597, 1382, 1454
TspDTI ATGAA 7 cut(s) 53, 189, 384, 693, 790, 795, 1203
TspGWI ACGGA 1 cut(s) 925
VpaK11BI GGWCC 2 cut(s) 113, 1415
XapI RAATTY 2 cut(s) 126, 1450
XbaI TCTAGA 1 cut(s) 1222
XcmI CCANNNNNNNNNTGG 1 cut(s) 581
XmiI GTMKAC 1 cut(s) 435
XmnI GAANNNNTTC 2 cut(s) 607, 1473
XspI CTAG 3 cut(s) 950, 1223, 1466
ZrmI AGTACT 2 cut(s) 322, 649
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.