MD02G1234300.v1.1

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0000107
Physical Location & Seq
Reverse (-)
28091239 .. 28093716
2478 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1234300.v1.1.491

Sequence Viewer

Length: 1707 bp
ATGATAGCAGATGCTCGATTTGTAAGCACAGTGTATGGCGACAGAGTAGTCCCTGAAAACTGCAAAGAAGTAAGTTACTGTGAACACCACGGTCCAGCCATCCGATTCCCATTTCGACTTAAAGGACAGCCATTCCAGTGCGGTTACCATGGCTTTGATCTATCATGCACCACCGACGGCCGAACCGTGCTTGAGATGCCGTCCTCATCTAACAAGCTCATCGTTGAAACGATTGACTACGCATCTCAAGAAATCGGAGTATATTTCCAAAATGATTGCCTGCCTAAAGATATTTTCAAATTCAACTTATCTTCCTCGACCTTTCAATTTGTGCACGGACCGTTTGATACTACTTATACTTTATTCAGTTGTACGTCACCATTACTTGAAACAGGCAGACTTTGTCTAATCAAACTGTGCCCTTGCGGCCTTGACAATCCTGAAAACCAAACTAACTACTATGCTGTCAACGGCTACTGTTCCATTGATGATATGAACCTAGTGTCTTGTACCAAGCTGCGTGACTACACATCAATTCCACAAATTTCATTAGTGGAAGCATTCAACCTTATGATGCTGCAGTGGTCCAAACCATCATGTGGACGTTGCGAAGAGATGGGCAAGACTTGCAGACTGAAGAGAACTGTTGGTCAATACAATTTCACAGATAATCAGACTGCAGAAACTGAATGCGTGAGCGAAGGTATTTTCTCACTTTCTGTGGTTGTAACAGTTGCGGGGACCCTCATTTACCGTGTTTATAGCTCCAACAGAACAGAGAAAACAAATCAGTTGAGGATTGAAAGATTTTTGGATGATTACATAGCACACAAGCCCAGTAGATATTCCTACGCTGATATTAAAGGGATAACAAATCAGTTCAATGAAAAGTTAGGTCAAGGAGCCTATGGAACAGTGTTTAAAGGACGACTTTCCTCCGACTTACTTGTAGCTGTGAAAATCCTCAACAATTCTAATGAAAAGGGAAAAGATTTTATAAATGAAGTCGGAACAATGGGTCGAGTCCACCATGTCAATCTCGTGTATGAATATCTACCAAATGGTTCACTACAGAATTTCTTATCATCAGCAGATAGTGAAAGCGCTTTCCTTGGTTGGGATAAGTTGCATGAGATTGCTTTAGGTATAGCCAAAGGAATTGAATATCTTCACCAAGGGTGTGACCATCGAATCCTCCATTTCGATATAAAACCCCACAACATTTTGCTAGACCAGAATTTCACCCCAAAAGTTTCCGATTTTGGCCTCGCCAAGTTGTGCTCTAGAGATCAAAGCGCAATATCCATGACTACCATCAGGGGGACCATGGGCTACATTGCGCCCGAAGTGTTCTCTAGGAACTTTGGAAATGTATCCTACAAGTCAGATGTTTATAGCTTTGGAATGTTGCTGCTGGAAATGGTTGGGGGAACAAAAAACTTTAAGTTCATGGAAGAGGACTCCACCAGCAGTCAAGTCTATTTCCCAGAATGGATTTATAACCTTTTAGAACAAGGGGACGACCTACGGATTCACATTGAGGATGGAGGAGATGCTGAACATGCAAAGAAACTTGCCATTGTGGGTCTATGGTGCGTCCAATGGCACCCAATAGATCGTCCTTCCATGAAAGTTGTTATTCAAATTTTAGAAGGAGGTGACAATCTAACCGTACCTGCTAATCCTTTCCGATCTACTTCGAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase Pkinase_Tyr

Protein Analysis

569

Amino Acids

63.93

Weight (kDa)

5.72

Isoelectric Point (pI)

33.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 21 - 87 1.9e-15 Wall-associated receptor kinase galacturonan-binding
PK_Tyr_Ser-Thr PF07714 293 - 492 3.9e-34 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 294 - 547 1.2e-37 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 998, 1500
AasI GACNNNNNNGTC 1 cut(s) 47
Acc36I ACCTGC 1 cut(s) 1684
AccB1I GGYRCC 1 cut(s) 1605
AccB7I CCANNNNNTGG 1 cut(s) 599
AciI CCGC 3 cut(s) 141, 426, 737
AcoI YGGCCR 1 cut(s) 178
AcsI RAATTY 5 cut(s) 299, 543, 1075, 1237, 1644
AcuI CTGAAG 1 cut(s) 656
AfaI GTAC 3 cut(s) 373, 511, 1674
AfeI AGCGCT 1 cut(s) 1105
AfiI CCNNNNNNNGG 3 cut(s) 599, 1117, 1320
AluBI AGCT 5 cut(s) 217, 517, 765, 953, 1398
AluI AGCT 5 cut(s) 217, 517, 765, 953, 1398
Alw21I GWGCWC 2 cut(s) 336, 1283
Alw44I GTGCAC 1 cut(s) 332
AlwNI CAGNNNCTG 1 cut(s) 686
Aor51HI AGCGCT 1 cut(s) 1105
AoxI GGCC 3 cut(s) 178, 427, 1264
ApaLI GTGCAC 1 cut(s) 332
ApeKI GCWGC 3 cut(s) 517, 577, 1411
ApoI RAATTY 5 cut(s) 299, 543, 1075, 1237, 1644
Asp700I GAANNNNTTC 1 cut(s) 1167
AspLEI GCGC 3 cut(s) 1106, 1298, 1342
AspS9I GGNCC 5 cut(s) 92, 338, 585, 741, 1323
AsuHPI GGTGA 4 cut(s) 369, 1163, 1234, 1670
AsuII TTCGAA 1 cut(s) 1700
AvaII GGWCC 5 cut(s) 92, 338, 585, 741, 1323
BaeGI GKGCMC 2 cut(s) 336, 422
BanI GGYRCC 1 cut(s) 1605
BauI CACGAG 1 cut(s) 1040
Bbv12I GWGCWC 2 cut(s) 336, 1283
BbvI GCAGC 3 cut(s) 504, 564, 1398
BccI CCATC 6 cut(s) 107, 601, 610, 1194, 1322, 1538
BceAI ACGGC 3 cut(s) 184, 193, 487
BciVI GTATCC 1 cut(s) 1384
BfaI CTAG 4 cut(s) 500, 1229, 1284, 1356
BfmI CTRYAG 3 cut(s) 578, 678, 1070
BfoI RGCGCY 1 cut(s) 1107
BfuAI ACCTGC 1 cut(s) 1684
BfuI GTATCC 1 cut(s) 1384
BglI GCCNNNNNGGC 1 cut(s) 426
BisI GCNGC 4 cut(s) 427, 518, 578, 1412
BlsI GCNGC 4 cut(s) 428, 519, 579, 1413
Bme18I GGWCC 5 cut(s) 92, 338, 585, 741, 1323
BmgT120I GGNCC 5 cut(s) 92, 338, 585, 741, 1323
BmiI GGNNCC 5 cut(s) 742, 743, 904, 1324, 1607
BmrI ACTGGG 1 cut(s) 831
BmsI GCATC 4 cut(s) 186, 251, 564, 1543
BmuI ACTGGG 1 cut(s) 831
Bpu14I TTCGAA 1 cut(s) 1700
BpuEI CTTGAG 2 cut(s) 212, 231
BsaJI CCNNGG 5 cut(s) 88, 148, 1111, 1174, 1326
Bsc4I CCNNNNNNNGG 3 cut(s) 599, 1117, 1320
Bse1I ACTGG 2 cut(s) 136, 837
Bse3DI GCAATG 1 cut(s) 1335
BseDI CCNNGG 5 cut(s) 88, 148, 1111, 1174, 1326
BseGI GGATG 3 cut(s) 99, 820, 1549
BseLI CCNNNNNNNGG 3 cut(s) 599, 1117, 1320
BseMI GCAATG 1 cut(s) 1335
BseNI ACTGG 2 cut(s) 136, 837
BseRI GAGGAG 1 cut(s) 1563
BseSI GKGCMC 2 cut(s) 336, 422
BseX3I CGGCCG 1 cut(s) 178
BseXI GCAGC 3 cut(s) 504, 564, 1398
Bsh1285I CGRYCG 1 cut(s) 181
BshFI GGCC 3 cut(s) 180, 429, 1266
BshNI GGYRCC 1 cut(s) 1605
BsiEI CGRYCG 1 cut(s) 181
BsiHKAI GWGCWC 2 cut(s) 336, 1283
BslFI GGGAC 4 cut(s) 35, 754, 1336, 1532
BslI CCNNNNNNNGG 3 cut(s) 599, 1117, 1320
BsmFI GGGAC 4 cut(s) 35, 754, 1336, 1532
BsmI GAATGC 2 cut(s) 560, 695
BsnI GGCC 3 cut(s) 180, 429, 1266
Bsp119I TTCGAA 1 cut(s) 1700
Bsp1286I GDGCHC 3 cut(s) 336, 422, 1283
Bsp143I GATC 4 cut(s) 157, 1288, 1615, 1691
Bsp19I CCATGG 2 cut(s) 148, 1326
BspACI CCGC 3 cut(s) 141, 426, 737
BspANI GGCC 3 cut(s) 180, 429, 1266
BspLI GGNNCC 5 cut(s) 742, 743, 904, 1324, 1607
BspMAI CTGCAG 2 cut(s) 582, 682
BspMI ACCTGC 1 cut(s) 1684
BspT104I TTCGAA 1 cut(s) 1700
BspT107I GGYRCC 1 cut(s) 1605
BsrDI GCAATG 1 cut(s) 1335
BsrI ACTGG 2 cut(s) 136, 837
BssECI CCNNGG 5 cut(s) 88, 148, 1111, 1174, 1326
BssMI GATC 4 cut(s) 157, 1288, 1615, 1691
BssSI CACGAG 1 cut(s) 1040
BssT1I CCWWGG 4 cut(s) 148, 1111, 1174, 1326
Bst2BI CACGAG 1 cut(s) 1040
Bst6I CTCTTC 3 cut(s) 606, 632, 1449
BstAPI GCANNNNNTGC 1 cut(s) 627
BstBI TTCGAA 1 cut(s) 1700
BstC8I GCNNGC 1 cut(s) 281
BstDSI CCRYGG 3 cut(s) 88, 148, 1326
BstEII GGTNACC 1 cut(s) 143
BstF5I GGATG 3 cut(s) 99, 820, 1549
BstH2I RGCGCY 1 cut(s) 1107
BstHHI GCGC 3 cut(s) 1106, 1298, 1342
BstKTI GATC 4 cut(s) 160, 1291, 1618, 1694
BstMBI GATC 4 cut(s) 157, 1288, 1615, 1691
BstMCI CGRYCG 1 cut(s) 181
BstMWI GCNNNNNNNGC 4 cut(s) 196, 426, 627, 1562
BstNSI RCATGY 1 cut(s) 1565
BstPI GGTNACC 1 cut(s) 143
BstSFI CTRYAG 3 cut(s) 578, 678, 1070
BstSLI GKGCMC 2 cut(s) 336, 422
BstV1I GCAGC 3 cut(s) 504, 564, 1398
BstZI CGGCCG 1 cut(s) 178
BsuI GTATCC 1 cut(s) 1384
BsuRI GGCC 3 cut(s) 180, 429, 1266
BtgI CCRYGG 3 cut(s) 88, 148, 1326
BtsCI GGATG 3 cut(s) 99, 820, 1549
BtsI GCAGTG 1 cut(s) 587
BtsIMutI CAGTG 4 cut(s) 36, 143, 587, 921
BveI ACCTGC 1 cut(s) 1684
Cac8I GCNNGC 1 cut(s) 281
CaiI CAGNNNCTG 1 cut(s) 686
CfoI GCGC 3 cut(s) 1106, 1298, 1342
Cfr13I GGNCC 5 cut(s) 92, 338, 585, 741, 1323
CpoI CGGWCCG 1 cut(s) 338
CseI GACGC 1 cut(s) 1585
Csp6I GTAC 3 cut(s) 372, 510, 1673
CspI CGGWCCG 1 cut(s) 338
CviQI GTAC 3 cut(s) 372, 510, 1673
DpnI GATC 4 cut(s) 159, 1290, 1617, 1693
DpnII GATC 4 cut(s) 157, 1288, 1615, 1691
DraI TTTAAA 1 cut(s) 922
DrdI GACNNNNNNGTC 1 cut(s) 47
DseDI GACNNNNNNGTC 1 cut(s) 47
EaeI YGGCCR 1 cut(s) 178
EagI CGGCCG 1 cut(s) 178
Eam1104I CTCTTC 3 cut(s) 606, 632, 1449
EarI CTCTTC 3 cut(s) 606, 632, 1449
EclXI CGGCCG 1 cut(s) 178
Eco130I CCWWGG 4 cut(s) 148, 1111, 1174, 1326
Eco47I GGWCC 5 cut(s) 92, 338, 585, 741, 1323
Eco47III AGCGCT 1 cut(s) 1105
Eco52I CGGCCG 1 cut(s) 178
Eco57I CTGAAG 1 cut(s) 656
Eco91I GGTNACC 1 cut(s) 143
EcoO109I RGGNCCY 1 cut(s) 741
EcoO65I GGTNACC 1 cut(s) 143
EcoT14I CCWWGG 4 cut(s) 148, 1111, 1174, 1326
ErhI CCWWGG 4 cut(s) 148, 1111, 1174, 1326
FalI AAGNNNNNCTT 2 cut(s) 915, 947
FaqI GGGAC 4 cut(s) 35, 754, 1336, 1532
FauI CCCGC 1 cut(s) 730
Fnu4HI GCNGC 4 cut(s) 427, 518, 578, 1412
FokI GGATG 3 cut(s) 86, 827, 1556
Fsp4HI GCNGC 4 cut(s) 427, 518, 578, 1412
FspBI CTAG 4 cut(s) 500, 1229, 1284, 1356
GlaI GCGC 3 cut(s) 1105, 1297, 1341
GluI GCNGC 4 cut(s) 427, 518, 578, 1412
HaeII RGCGCY 1 cut(s) 1107
HaeIII GGCC 3 cut(s) 180, 429, 1266
HgaI GACGC 1 cut(s) 1585
HhaI GCGC 3 cut(s) 1106, 1298, 1342
Hin6I GCGC 3 cut(s) 1104, 1296, 1340
HinP1I GCGC 3 cut(s) 1104, 1296, 1340
HincII GTYRAC 1 cut(s) 469
HindII GTYRAC 1 cut(s) 469
HinfI GANTC 5 cut(s) 105, 1023, 1191, 1460, 1531
HphI GGTGA 4 cut(s) 369, 1163, 1234, 1670
Hpy166II GTNNAC 6 cut(s) 83, 334, 469, 602, 1027, 1067
Hpy188I TCNGA 8 cut(s) 104, 257, 675, 940, 1010, 1258, 1387, 1691
Hpy188III TCNNGA 3 cut(s) 248, 440, 1284
Hpy8I GTNNAC 6 cut(s) 83, 334, 469, 602, 1027, 1067
Hpy99I CGWCG 1 cut(s) 179
HpyAV CCTTC 3 cut(s) 695, 1632, 1646
HpyCH4IV ACGT 2 cut(s) 374, 604
HpyCH4V TGCA 8 cut(s) 63, 168, 334, 580, 630, 680, 1129, 1565
HpyF10VI GCNNNNNNNGC 4 cut(s) 196, 426, 627, 1562
HpySE526I ACGT 2 cut(s) 374, 604
HspAI GCGC 3 cut(s) 1104, 1296, 1340
KflI GGGWCCC 1 cut(s) 741
Kzo9I GATC 4 cut(s) 157, 1288, 1615, 1691
LmnI GCTCC 2 cut(s) 770, 902
Lsp1109I GCAGC 3 cut(s) 504, 564, 1398
LweI GCATC 4 cut(s) 186, 251, 564, 1543
MaeI CTAG 4 cut(s) 500, 1229, 1284, 1356
MaeII ACGT 2 cut(s) 374, 604
MaeIII GTNAC 7 cut(s) 74, 143, 375, 521, 727, 1181, 1658
MalI GATC 4 cut(s) 159, 1290, 1617, 1693
MboI GATC 4 cut(s) 157, 1288, 1615, 1691
MboII GAAGA 5 cut(s) 303, 623, 649, 1160, 1466
MhlI GDGCHC 3 cut(s) 336, 422, 1283
MlyI GAGTC 2 cut(s) 1032, 1454
MmeI TCCRAC 3 cut(s) 792, 963, 988
MroXI GAANNNNTTC 1 cut(s) 1167
MseI TTAA 4 cut(s) 120, 861, 921, 1443
MslI CAYNNNNRTG 1 cut(s) 136
Mva1269I GAATGC 2 cut(s) 560, 695
MwoI GCNNNNNNNGC 4 cut(s) 196, 426, 627, 1562
NcoI CCATGG 2 cut(s) 148, 1326
NdeII GATC 4 cut(s) 157, 1288, 1615, 1691
NlaIV GGNNCC 5 cut(s) 742, 743, 904, 1324, 1607
NmuCI GTSAC 4 cut(s) 375, 521, 1181, 1658
NspI RCATGY 1 cut(s) 1565
NspV TTCGAA 1 cut(s) 1700
PcsI WCGNNNNNNNCGW 1 cut(s) 183
PctI GAATGC 2 cut(s) 560, 695
PdmI GAANNNNTTC 1 cut(s) 1167
PfeI GAWTC 3 cut(s) 105, 1191, 1531
PflFI GACNNNGTC 1 cut(s) 402
PflMI CCANNNNNTGG 1 cut(s) 599
PkrI GCNGC 4 cut(s) 428, 519, 579, 1413
PleI GAGTC 2 cut(s) 1031, 1454
PpsI GAGTC 2 cut(s) 1031, 1454
PpuMI RGGWCCY 1 cut(s) 741
PsiI TTATAA 2 cut(s) 998, 1500
Psp5II RGGWCCY 1 cut(s) 741
PspEI GGTNACC 1 cut(s) 143
PspN4I GGNNCC 5 cut(s) 742, 743, 904, 1324, 1607
PspPI GGNCC 5 cut(s) 92, 338, 585, 741, 1323
PspPPI RGGWCCY 1 cut(s) 741
PstI CTGCAG 2 cut(s) 582, 682
PstNI CAGNNNCTG 1 cut(s) 686
PsyI GACNNNGTC 1 cut(s) 402
RsaI GTAC 3 cut(s) 373, 511, 1674
RsaNI GTAC 3 cut(s) 372, 510, 1673
RseI CAYNNNNRTG 1 cut(s) 136
Rsr2I CGGWCCG 1 cut(s) 338
RsrII CGGWCCG 1 cut(s) 338
SaqAI TTAA 4 cut(s) 120, 861, 921, 1443
SatI GCNGC 4 cut(s) 427, 518, 578, 1412
Sau3AI GATC 4 cut(s) 157, 1288, 1615, 1691
Sau96I GGNCC 5 cut(s) 92, 338, 585, 741, 1323
SchI GAGTC 2 cut(s) 1032, 1454
SduI GDGCHC 3 cut(s) 336, 422, 1283
SfaNI GCATC 4 cut(s) 186, 251, 564, 1543
SfcI CTRYAG 3 cut(s) 578, 678, 1070
SfuI TTCGAA 1 cut(s) 1700
SinI GGWCC 5 cut(s) 92, 338, 585, 741, 1323
SmiMI CAYNNNNRTG 1 cut(s) 136
SmlI CTYRAG 2 cut(s) 191, 246
SmoI CTYRAG 2 cut(s) 191, 246
SsiI CCGC 3 cut(s) 141, 426, 737
SspMI CTAG 4 cut(s) 500, 1229, 1284, 1356
StyI CCWWGG 4 cut(s) 148, 1111, 1174, 1326
TaiI ACGT 2 cut(s) 377, 607
TaqI TCGA 7 cut(s) 16, 115, 317, 1021, 1189, 1203, 1700
TauI GCSGC 1 cut(s) 429
TfiI GAWTC 3 cut(s) 105, 1191, 1531
Tru1I TTAA 4 cut(s) 120, 861, 921, 1443
Tru9I TTAA 4 cut(s) 120, 861, 921, 1443
TscAI CASTG 4 cut(s) 36, 143, 587, 921
TseFI GTSAC 4 cut(s) 375, 521, 1181, 1658
TseI GCWGC 3 cut(s) 517, 577, 1411
Tsp45I GTSAC 4 cut(s) 375, 521, 1181, 1658
TspDTI ATGAA 8 cut(s) 509, 537, 900, 993, 1017, 1062, 1438, 1643
TspGWI ACGGA 2 cut(s) 351, 1543
TspRI CASTG 4 cut(s) 36, 143, 587, 921
Tth111I GACNNNGTC 1 cut(s) 402
Van91I CCANNNNNTGG 1 cut(s) 599
VneI GTGCAC 1 cut(s) 332
VpaK11BI GGWCC 5 cut(s) 92, 338, 585, 741, 1323
XapI RAATTY 5 cut(s) 299, 543, 1075, 1237, 1644
XbaI TCTAGA 1 cut(s) 1283
XceI RCATGY 1 cut(s) 1565
XmnI GAANNNNTTC 1 cut(s) 1167
XspI CTAG 4 cut(s) 500, 1229, 1284, 1356
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.