Rroxscaffold_4G00317370

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000107
Physical Location & Seq
Forward (+)
42628928 .. 42631209
2282 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00317370.1

Sequence Viewer

Length: 1923 bp
ATGGGCATTGCTATTATTACGTCAGAAATGCTGCAAGCTCTCCTCTCTTCCTTTTGCTTCATCTTATTACTAGCTTTCTCCTCCGAAGTCCTTGGTGAAACTGAAACCCAGAATAGTTGCCCAGAATTGAAGTGTGTGGATCATGGCCCAACTATCAAATTCCCTTTTAGCCTCAAAGGTAGCCACCACCCAGATCATTGTGGGTATCCTGGGTTTCTTGTATCCTGTAATGAAAAGCATGAAACCATTCTTGAGCTGCCATATGCTCCGTTCAAATTCCCAATCGAAAGCATAGACTATAAGAATCAGACAATCCAGCTATATGACCCAGAAAATTGCTTGCTGGTGAAGCTATTGAAATCCCACGACATATCACTCTCTCCCTTCCGGTACCCAAAAGACATATTATATGATATTACCTTATTCAATTGTTCTTTAGGTGAAAGGGAATTGGGACACCCAATCCCCTGCTTTAGGGGCCCTGGCTACCAAATTTATTTGGTTTCTTCTTCTGATTACATTGAGTACTTGCCCCTCCTGTCTTGTACAAAGATGTATGATCTTTCATCAGTTCCGTACAACTCGTACGCGCCTGAAAATCGTTATTTGAAATGGTCTGAACCAGATTGTGGACTATGTGAAGCGCAGGGCAACAAATGTGGATTGAAGAACAAAGGAACCCAAAGAACTGATATTGAATGCCGTTACATGAGGAAAGGAGCTCACAACTCGAACACATTTGAGAAAGATGACAGTGGTCTGATTTTGCTATTATCTTTGACAGGTGGACAAACGAAGTCAGTAGCTACTGGTGCATCTCTGGGCTCATTTGTACTCGTCTTACTTGCTGCTGCAACTTATTATGTCTATCATTCCGACAGAAAAGAAAAGGAGGATCAATTAAAAATTGAAAGATTTTTAGACGATTACAGAGCTCTCAAACCAAGCAGATATTCTTATGCAGATATTAAGCGGATTACAAATCAGTTCAATGATAATTTAGGCCAAGGAGCCTATGGAACTGTTTATAAGGGAAAGCTTTCTTCTGAATGTTTTGTCGCTGTGAAAGTCCTCAATAGTACCAAGGGGAATGGGGATGAGTTTGTCAATGAGGTAGGAACAATGGGTCATATCCACCATGTCAATGTGGTTCGCTTGGTTGGATTCTGCGCGGACGGATGTAGACGAGCTCTTGTTTATGATTTCTTACCTAATGGTTCACTACAAGATTTCATTTCATCAGCAGACAATAACAATTCTTTCCTTGGTTGGGATAAGTTGCAAGATATTGCTTTAGGTATAGCTAAAGGAATTGAATATCTGCACCAAGGCTGCGATCAAAGAATCCTGCATTTTGATATTAAACCTCAAAATGTTTTGCTAGACCATAACTTCACCCCAAAGATTTCTGATTTTGGTTTGGCCAAGTTATGTTCCAAGGACCAAAGTATAGTGTCAATGACTACAGCTAGAGGAACCATGGGATACATTGCACCTGAAGTGTTCTCAAGAAACTTTGGAAATGTATCCTATAAGTCAGATGTGTATAGTTATGGAATGGTTTTGCTGGAGTTGGTAGGAGGAAGAAAGAACATCAGTTCAACAACAGAGAACAAAACTGAAGTTTACTACCCAGAATGGATCTATAATCTTTTAGAAGAAGGAGAAGACCTACGAATCCATGTTGAGGAAGAAGGAGATACTGTAATTGCAAGGAGACTTGCGATTGTAGGGCTCTGGTGCATCCAATGGCATCCAGTAGATCGTCCTTCCATGAAAGGGGTGGTTCATATGTTGGAAGGAGAAGAGAACTTAACCATGCCGCCAAATCCTTTTCCGTCTACAGGTCCTACAGGAACAAGTGCAAGTATGCCTGCAAGAAACAGAAACCTTCAACTAGAAGTAATTGCTGAGTTAGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase

Protein Analysis

640

Amino Acids

71.73

Weight (kDa)

5.63

Isoelectric Point (pI)

39.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 40 - 109 9.2e-16 Wall-associated receptor kinase galacturonan-binding
PK_Tyr_Ser-Thr PF07714 330 - 598 6.6e-44 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 331 - 597 2.3e-46 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1029
Acc65I GGTACC 1 cut(s) 390
AccB1I GGYRCC 1 cut(s) 390
AccB7I CCANNNNNTGG 1 cut(s) 629
AccI GTMKAC 2 cut(s) 1183, 1841
AccII CGCG 2 cut(s) 590, 1172
AciI CCGC 3 cut(s) 973, 1172, 1823
AclWI GGATC 3 cut(s) 147, 903, 1649
AcoI YGGCCR 1 cut(s) 1422
AcsI RAATTY 3 cut(s) 158, 275, 492
AcuI CTGAAG 2 cut(s) 1518, 1641
AfaI GTAC 7 cut(s) 392, 527, 547, 578, 587, 834, 1081
AfiI CCNNNNNNNGG 6 cut(s) 474, 629, 1270, 1687, 1779, 1844
AjnI CCWGG 2 cut(s) 208, 481
AjuI GAANNNNNNNTTGG 2 cut(s) 937, 969
Alw21I GWGCWC 3 cut(s) 724, 937, 1192
Alw26I GTCTC 1 cut(s) 1711
AlwI GGATC 3 cut(s) 147, 903, 1649
AoxI GGCC 4 cut(s) 145, 478, 1003, 1422
ApaI GGGCCC 1 cut(s) 482
ApeKI GCWGC 5 cut(s) 31, 256, 848, 851, 1332
ApoI RAATTY 3 cut(s) 158, 275, 492
Asp700I GAANNNNTTC 2 cut(s) 246, 1039
Asp718I GGTACC 1 cut(s) 390
AspLEI GCGC 3 cut(s) 592, 646, 1172
AspS9I GGNCC 5 cut(s) 146, 478, 479, 1441, 1847
AsuHPI GGTGA 4 cut(s) 107, 358, 452, 1387
AvaII GGWCC 2 cut(s) 1441, 1847
BaeGI GKGCMC 1 cut(s) 482
BalI TGGCCA 1 cut(s) 1424
BanI GGYRCC 1 cut(s) 390
BanII GRGCYC 6 cut(s) 482, 724, 827, 937, 1192, 1737
BbsI GAAGAC 1 cut(s) 1674
Bbv12I GWGCWC 3 cut(s) 724, 937, 1192
BbvI GCAGC 5 cut(s) 18, 243, 835, 838, 1319
BceAI ACGGC 1 cut(s) 687
BciT130I CCWGG 2 cut(s) 210, 483
BciVI GTATCC 4 cut(s) 216, 232, 1478, 1537
BcoDI GTCTC 1 cut(s) 1711
BfaI CTAG 4 cut(s) 71, 1382, 1470, 1898
BfmI CTRYAG 3 cut(s) 1464, 1842, 1851
BfuI GTATCC 4 cut(s) 216, 232, 1478, 1537
BisI GCNGC 6 cut(s) 32, 257, 849, 852, 1333, 1823
BlsI GCNGC 6 cut(s) 33, 258, 850, 853, 1334, 1824
BmcAI AGTACT 1 cut(s) 527
Bme1390I CCNGG 2 cut(s) 210, 483
Bme18I GGWCC 2 cut(s) 1441, 1847
BmgT120I GGNCC 5 cut(s) 146, 478, 479, 1441, 1847
BmiI GGNNCC 6 cut(s) 392, 479, 480, 679, 1012, 1477
BmrFI CCNGG 2 cut(s) 210, 483
BmsI GCATC 3 cut(s) 824, 1752, 1762
BoxI GACNNNNGTC 1 cut(s) 756
BpiI GAAGAC 1 cut(s) 1674
BpmI CTGGAG 1 cut(s) 1589
BpuEI CTTGAG 2 cut(s) 272, 1492
BsaJI CCNNGG 9 cut(s) 91, 209, 481, 1006, 1083, 1264, 1327, 1437, 1479
BsaWI WCCGGW 1 cut(s) 387
BsaXI ACNNNNNCTCC 2 cut(s) 1689, 1719
Bsc4I CCNNNNNNNGG 6 cut(s) 474, 629, 1270, 1687, 1779, 1844
Bse1I ACTGG 2 cut(s) 814, 1757
Bse3DI GCAATG 2 cut(s) 6, 1488
BseBI CCWGG 2 cut(s) 210, 483
BseDI CCNNGG 9 cut(s) 91, 209, 481, 1006, 1083, 1264, 1327, 1437, 1479
BseGI GGATG 4 cut(s) 1102, 1184, 1743, 1753
BseLI CCNNNNNNNGG 6 cut(s) 474, 629, 1270, 1687, 1779, 1844
BseMI GCAATG 2 cut(s) 6, 1488
BseMII CTCAG 1 cut(s) 1902
BseNI ACTGG 2 cut(s) 814, 1757
BseRI GAGGAG 2 cut(s) 32, 70
BseSI GKGCMC 1 cut(s) 482
BseXI GCAGC 5 cut(s) 18, 243, 835, 838, 1319
BsgI GTGCAG 1 cut(s) 1307
Bsh1236I CGCG 2 cut(s) 590, 1172
BshFI GGCC 4 cut(s) 147, 480, 1005, 1424
BshNI GGYRCC 1 cut(s) 390
BsiHKAI GWGCWC 3 cut(s) 724, 937, 1192
BsiSI CCGG 1 cut(s) 388
BsiWI CGTACG 1 cut(s) 585
BslFI GGGAC 1 cut(s) 468
BslI CCNNNNNNNGG 6 cut(s) 474, 629, 1270, 1687, 1779, 1844
BsmAI GTCTC 1 cut(s) 1711
BsmFI GGGAC 1 cut(s) 468
BsmI GAATGC 1 cut(s) 704
BsnI GGCC 4 cut(s) 147, 480, 1005, 1424
Bsp120I GGGCCC 1 cut(s) 478
Bsp1286I GDGCHC 6 cut(s) 482, 724, 827, 937, 1192, 1737
Bsp1407I TGTACA 1 cut(s) 545
Bsp143I GATC 7 cut(s) 139, 193, 559, 895, 1336, 1641, 1762
Bsp19I CCATGG 1 cut(s) 1479
BspACI CCGC 3 cut(s) 973, 1172, 1823
BspANI GGCC 4 cut(s) 147, 480, 1005, 1424
BspCNI CTCAG 1 cut(s) 1903
BspFNI CGCG 2 cut(s) 590, 1172
BspLI GGNNCC 6 cut(s) 392, 479, 480, 679, 1012, 1477
BspPI GGATC 3 cut(s) 147, 903, 1649
BspT107I GGYRCC 1 cut(s) 390
BsrDI GCAATG 2 cut(s) 6, 1488
BsrGI TGTACA 1 cut(s) 545
BsrI ACTGG 2 cut(s) 814, 1757
BssECI CCNNGG 9 cut(s) 91, 209, 481, 1006, 1083, 1264, 1327, 1437, 1479
BssMI GATC 7 cut(s) 139, 193, 559, 895, 1336, 1641, 1762
BssT1I CCWWGG 7 cut(s) 91, 1006, 1083, 1264, 1327, 1437, 1479
Bst2UI CCWGG 2 cut(s) 210, 483
Bst4CI ACNGT 3 cut(s) 755, 1024, 1705
Bst6I CTCTTC 2 cut(s) 52, 1800
BstAUI TGTACA 1 cut(s) 545
BstC8I GCNNGC 3 cut(s) 36, 341, 1875
BstDEI CTNAG 1 cut(s) 1911
BstDSI CCRYGG 1 cut(s) 1479
BstENI CCTNNNNNAGG 1 cut(s) 472
BstF5I GGATG 4 cut(s) 1102, 1184, 1743, 1753
BstFNI CGCG 2 cut(s) 590, 1172
BstHHI GCGC 3 cut(s) 592, 646, 1172
BstKTI GATC 7 cut(s) 142, 196, 562, 898, 1339, 1644, 1765
BstMAI GTCTC 1 cut(s) 1711
BstMBI GATC 7 cut(s) 139, 193, 559, 895, 1336, 1641, 1762
BstMWI GCNNNNNNNGC 3 cut(s) 349, 477, 812
BstNI CCWGG 2 cut(s) 210, 483
BstPAI GACNNNNGTC 1 cut(s) 756
BstSCI CCNGG 2 cut(s) 208, 481
BstSFI CTRYAG 3 cut(s) 1464, 1842, 1851
BstSLI GKGCMC 1 cut(s) 482
BstUI CGCG 2 cut(s) 590, 1172
BstV1I GCAGC 5 cut(s) 18, 243, 835, 838, 1319
BstV2I GAAGAC 1 cut(s) 1674
BstX2I RGATCY 1 cut(s) 1641
BstYI RGATCY 1 cut(s) 1641
BsuI GTATCC 4 cut(s) 216, 232, 1478, 1537
BsuRI GGCC 4 cut(s) 147, 480, 1005, 1424
BtgI CCRYGG 1 cut(s) 1479
BtsCI GGATG 4 cut(s) 1102, 1184, 1743, 1753
BtsIMutI CAGTG 1 cut(s) 760
Cac8I GCNNGC 3 cut(s) 36, 341, 1875
CfoI GCGC 3 cut(s) 592, 646, 1172
Cfr13I GGNCC 5 cut(s) 146, 478, 479, 1441, 1847
Csp6I GTAC 7 cut(s) 391, 526, 546, 577, 586, 833, 1080
CspCI CAANNNNNGTGG 2 cut(s) 640, 675
CviAII CATG 8 cut(s) 143, 239, 709, 1139, 1480, 1682, 1774, 1819
CviQI GTAC 7 cut(s) 391, 526, 546, 577, 586, 833, 1080
DdeI CTNAG 1 cut(s) 1911
DpnI GATC 7 cut(s) 141, 195, 561, 897, 1338, 1643, 1764
DpnII GATC 7 cut(s) 139, 193, 559, 895, 1336, 1641, 1762
EaeI YGGCCR 1 cut(s) 1422
Eam1104I CTCTTC 2 cut(s) 52, 1800
EarI CTCTTC 2 cut(s) 52, 1800
Ecl136II GAGCTC 3 cut(s) 722, 935, 1190
Eco130I CCWWGG 7 cut(s) 91, 1006, 1083, 1264, 1327, 1437, 1479
Eco24I GRGCYC 6 cut(s) 482, 724, 827, 937, 1192, 1737
Eco47I GGWCC 2 cut(s) 1441, 1847
Eco53kI GAGCTC 3 cut(s) 722, 935, 1190
Eco57I CTGAAG 2 cut(s) 1518, 1641
EcoICRI GAGCTC 3 cut(s) 722, 935, 1190
EcoNI CCTNNNNNAGG 1 cut(s) 472
EcoO109I RGGNCCY 3 cut(s) 478, 479, 1847
EcoRII CCWGG 2 cut(s) 208, 481
EcoT14I CCWWGG 7 cut(s) 91, 1006, 1083, 1264, 1327, 1437, 1479
EcoT38I GRGCYC 6 cut(s) 482, 724, 827, 937, 1192, 1737
ErhI CCWWGG 7 cut(s) 91, 1006, 1083, 1264, 1327, 1437, 1479
FaeI CATG 8 cut(s) 146, 242, 712, 1142, 1483, 1685, 1777, 1822
FaqI GGGAC 1 cut(s) 468
FatI CATG 8 cut(s) 142, 238, 708, 1138, 1479, 1681, 1773, 1818
FauNDI CATATG 2 cut(s) 262, 1791
FblI GTMKAC 2 cut(s) 1183, 1841
Fnu4HI GCNGC 6 cut(s) 32, 257, 849, 852, 1333, 1823
FokI GGATG 4 cut(s) 1109, 1191, 1730, 1740
FriOI GRGCYC 6 cut(s) 482, 724, 827, 937, 1192, 1737
Fsp4HI GCNGC 6 cut(s) 32, 257, 849, 852, 1333, 1823
FspBI CTAG 4 cut(s) 71, 1382, 1470, 1898
GlaI GCGC 3 cut(s) 591, 645, 1171
GluI GCNGC 6 cut(s) 32, 257, 849, 852, 1333, 1823
GsuI CTGGAG 1 cut(s) 1589
HaeIII GGCC 4 cut(s) 147, 480, 1005, 1424
HapII CCGG 1 cut(s) 388
HhaI GCGC 3 cut(s) 592, 646, 1172
Hin1II CATG 8 cut(s) 146, 242, 712, 1142, 1483, 1685, 1777, 1822
Hin6I GCGC 3 cut(s) 590, 644, 1170
HinP1I GCGC 3 cut(s) 590, 644, 1170
HindIII AAGCTT 1 cut(s) 1037
HinfI GANTC 4 cut(s) 304, 1164, 1344, 1677
HpaII CCGG 1 cut(s) 388
HphI GGTGA 4 cut(s) 107, 358, 452, 1387
Hpy166II GTNNAC 6 cut(s) 632, 788, 1184, 1220, 1627, 1842
Hpy188III TCNNGA 2 cut(s) 251, 1509
Hpy8I GTNNAC 6 cut(s) 632, 788, 1184, 1220, 1627, 1842
HpyAV CCTTC 6 cut(s) 394, 1655, 1688, 1779, 1793, 1901
HpyCH4III ACNGT 3 cut(s) 755, 1024, 1705
HpyCH4IV ACGT 1 cut(s) 20
HpyF10VI GCNNNNNNNGC 3 cut(s) 349, 477, 812
HpyF3I CTNAG 1 cut(s) 1911
HpySE526I ACGT 1 cut(s) 20
Hsp92II CATG 8 cut(s) 146, 242, 712, 1142, 1483, 1685, 1777, 1822
HspAI GCGC 3 cut(s) 590, 644, 1170
KpnI GGTACC 1 cut(s) 394
Kzo9I GATC 7 cut(s) 139, 193, 559, 895, 1336, 1641, 1762
LmnI GCTCC 3 cut(s) 271, 719, 1010
Lsp1109I GCAGC 5 cut(s) 18, 243, 835, 838, 1319
LweI GCATC 3 cut(s) 824, 1752, 1762
MaeI CTAG 4 cut(s) 71, 1382, 1470, 1898
MaeII ACGT 1 cut(s) 20
MaeIII GTNAC 1 cut(s) 704
MalI GATC 7 cut(s) 141, 195, 561, 897, 1338, 1643, 1764
MboI GATC 7 cut(s) 139, 193, 559, 895, 1336, 1641, 1762
MfeI CAATTG 1 cut(s) 427
MflI RGATCY 1 cut(s) 1641
MhlI GDGCHC 6 cut(s) 482, 724, 827, 937, 1192, 1737
MlsI TGGCCA 1 cut(s) 1424
MluNI TGGCCA 1 cut(s) 1424
MmeI TCCRAC 3 cut(s) 900, 1141, 1776
Mox20I TGGCCA 1 cut(s) 1424
MroXI GAANNNNTTC 2 cut(s) 246, 1039
MscI TGGCCA 1 cut(s) 1424
MseI TTAA 4 cut(s) 902, 969, 1362, 1814
MslI CAYNNNNRTG 1 cut(s) 1143
Msp20I TGGCCA 1 cut(s) 1424
MspI CCGG 1 cut(s) 388
MspR9I CCNGG 2 cut(s) 210, 483
MunI CAATTG 1 cut(s) 427
Mva1269I GAATGC 1 cut(s) 704
MvaI CCWGG 2 cut(s) 210, 483
MvnI CGCG 2 cut(s) 590, 1172
MwoI GCNNNNNNNGC 3 cut(s) 349, 477, 812
NcoI CCATGG 1 cut(s) 1479
NdeI CATATG 2 cut(s) 262, 1791
NdeII GATC 7 cut(s) 139, 193, 559, 895, 1336, 1641, 1762
NlaIII CATG 8 cut(s) 146, 242, 712, 1142, 1483, 1685, 1777, 1822
NlaIV GGNNCC 6 cut(s) 392, 479, 480, 679, 1012, 1477
PctI GAATGC 1 cut(s) 704
PdmI GAANNNNTTC 2 cut(s) 246, 1039
PfeI GAWTC 4 cut(s) 304, 1164, 1344, 1677
Pfl23II CGTACG 1 cut(s) 585
PflMI CCANNNNNTGG 1 cut(s) 629
PkrI GCNGC 6 cut(s) 33, 258, 850, 853, 1334, 1824
PpuMI RGGWCCY 1 cut(s) 1847
PshAI GACNNNNGTC 1 cut(s) 756
PsiI TTATAA 1 cut(s) 1029
Psp124BI GAGCTC 3 cut(s) 724, 937, 1192
Psp5II RGGWCCY 1 cut(s) 1847
Psp6I CCWGG 2 cut(s) 208, 481
PspGI CCWGG 2 cut(s) 208, 481
PspLI CGTACG 1 cut(s) 585
PspN4I GGNNCC 6 cut(s) 392, 479, 480, 679, 1012, 1477
PspOMI GGGCCC 1 cut(s) 478
PspPI GGNCC 5 cut(s) 146, 478, 479, 1441, 1847
PspPPI RGGWCCY 1 cut(s) 1847
PsuI RGATCY 1 cut(s) 1641
RsaI GTAC 7 cut(s) 392, 527, 547, 578, 587, 834, 1081
RsaNI GTAC 7 cut(s) 391, 526, 546, 577, 586, 833, 1080
RseI CAYNNNNRTG 1 cut(s) 1143
SacI GAGCTC 3 cut(s) 724, 937, 1192
SaqAI TTAA 4 cut(s) 902, 969, 1362, 1814
SatI GCNGC 6 cut(s) 32, 257, 849, 852, 1333, 1823
Sau3AI GATC 7 cut(s) 139, 193, 559, 895, 1336, 1641, 1762
Sau96I GGNCC 5 cut(s) 146, 478, 479, 1441, 1847
ScaI AGTACT 1 cut(s) 527
ScrFI CCNGG 2 cut(s) 210, 483
SduI GDGCHC 6 cut(s) 482, 724, 827, 937, 1192, 1737
SfaNI GCATC 3 cut(s) 824, 1752, 1762
SfcI CTRYAG 3 cut(s) 1464, 1842, 1851
SinI GGWCC 2 cut(s) 1441, 1847
SmiMI CAYNNNNRTG 1 cut(s) 1143
SmlI CTYRAG 2 cut(s) 251, 1507
SmoI CTYRAG 2 cut(s) 251, 1507
SsiI CCGC 3 cut(s) 973, 1172, 1823
SspMI CTAG 4 cut(s) 71, 1382, 1470, 1898
SstI GAGCTC 3 cut(s) 724, 937, 1192
StyD4I CCNGG 2 cut(s) 208, 481
StyI CCWWGG 7 cut(s) 91, 1006, 1083, 1264, 1327, 1437, 1479
TaaI ACNGT 3 cut(s) 755, 1024, 1705
TaiI ACGT 1 cut(s) 23
TaqI TCGA 2 cut(s) 285, 731
TatI WGTACW 3 cut(s) 525, 545, 832
TauI GCSGC 1 cut(s) 1825
TfiI GAWTC 4 cut(s) 304, 1164, 1344, 1677
Tru1I TTAA 4 cut(s) 902, 969, 1362, 1814
Tru9I TTAA 4 cut(s) 902, 969, 1362, 1814
TscAI CASTG 1 cut(s) 760
TseI GCWGC 5 cut(s) 31, 256, 848, 851, 1332
TspDTI ATGAA 8 cut(s) 49, 246, 255, 555, 1222, 1227, 1778, 1790
TspGWI ACGGA 4 cut(s) 258, 564, 1191, 1827
TspRI CASTG 1 cut(s) 760
Van91I CCANNNNNTGG 1 cut(s) 629
VpaK11BI GGWCC 2 cut(s) 1441, 1847
XagI CCTNNNNNAGG 1 cut(s) 472
XapI RAATTY 3 cut(s) 158, 275, 492
XcmI CCANNNNNNNNNTGG 2 cut(s) 1013, 1780
XmiI GTMKAC 2 cut(s) 1183, 1841
XmnI GAANNNNTTC 2 cut(s) 246, 1039
XspI CTAG 4 cut(s) 71, 1382, 1470, 1898
ZrmI AGTACT 1 cut(s) 527
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.