MD07G1070200.v1.1

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Forward (+)
6639619 .. 6640137
519 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1070200.v1.1.491

Sequence Viewer

Length: 519 bp
ATGGGTCATATTCACCACGTCAATGTGGTTCGCTTGGTTGGTTTTTGTGCAGATGGATTTAGACGAGCTCTGGTTTATGAGTTCTTTTCCAATGGTTCGCTCCAGGATTATATTTCATCAGTAGATAGAAGGAACTCTTTCCTTGGTTGGGACAAGTTGCAAGATATTGCTATCGGCATAGCCAAAGGAATAGAATATCTTCATCTGGGATGCGAACTACGAATCCTCCATTTCGATATCAAACCCCACAATATTTTGCTAAACCAAAACTTCACACCAAAAATCTCTGATTTTGGTCTGGCCAAATTATGTTCCAAGGATCAAAGCATAGTGTCAATGACTACAGCGAAGGGGATCATGGGCTACATTGCACCAGAAGTATTTTCCAGGAATTTTGGAAATGTGTCTTACAAGGCAAATGTCTATAGTTTTGGAATGCTGCTGCTTGAGATGATAGGAGGAAGGAAGAATGCTGGTTCAACCACAGAGAACACGACCAATGAAGTTTACTATCCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

173

Amino Acids

19.29

Weight (kDa)

8.42

Isoelectric Point (pI)

32.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 1 - 157 5.1e-29 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 2 - 164 4.3e-32 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 327, 362
AcoI YGGCCR 1 cut(s) 300
AcsI RAATTY 1 cut(s) 391
AfiI CCNNNNNNNGG 1 cut(s) 148
AgsI TTSAA 1 cut(s) 480
AjiI CACGTC 1 cut(s) 19
AjnI CCWGG 2 cut(s) 102, 386
AloI GAACNNNNNNTCC 2 cut(s) 207, 239
AluBI AGCT 1 cut(s) 68
AluI AGCT 1 cut(s) 68
Alw21I GWGCWC 1 cut(s) 70
AlwI GGATC 2 cut(s) 327, 362
AoxI GGCC 1 cut(s) 300
ApeKI GCWGC 2 cut(s) 439, 442
ApoI RAATTY 1 cut(s) 391
Asp700I GAANNNNTTC 2 cut(s) 137, 198
AsuHPI GGTGA 1 cut(s) 5
BalI TGGCCA 1 cut(s) 302
BanII GRGCYC 1 cut(s) 70
Bbv12I GWGCWC 1 cut(s) 70
BbvI GCAGC 2 cut(s) 426, 429
BccI CCATC 1 cut(s) 47
BciT130I CCWGG 2 cut(s) 104, 388
BfmI CTRYAG 2 cut(s) 342, 424
BisI GCNGC 2 cut(s) 440, 443
BlsI GCNGC 2 cut(s) 441, 444
Bme1390I CCNGG 2 cut(s) 104, 388
BmgBI CACGTC 1 cut(s) 19
BmrFI CCNGG 2 cut(s) 104, 388
BmsI GCATC 1 cut(s) 200
BpmI CTGGAG 1 cut(s) 86
BpuEI CTTGAG 1 cut(s) 467
BsaJI CCNNGG 2 cut(s) 142, 315
BsaXI ACNNNNNCTCC 2 cut(s) 210, 240
Bsc4I CCNNNNNNNGG 1 cut(s) 148
Bse3DI GCAATG 1 cut(s) 366
BseBI CCWGG 2 cut(s) 104, 388
BseDI CCNNGG 2 cut(s) 142, 315
BseGI GGATG 1 cut(s) 215
BseLI CCNNNNNNNGG 1 cut(s) 148
BseMI GCAATG 1 cut(s) 366
BseXI GCAGC 2 cut(s) 426, 429
BsgI GTGCAG 1 cut(s) 69
BshFI GGCC 1 cut(s) 302
BsiHKAI GWGCWC 1 cut(s) 70
BslFI GGGAC 1 cut(s) 164
BslI CCNNNNNNNGG 1 cut(s) 148
BsmFI GGGAC 1 cut(s) 164
BsmI GAATGC 2 cut(s) 441, 475
BsnI GGCC 1 cut(s) 302
Bsp1286I GDGCHC 1 cut(s) 70
Bsp143I GATC 2 cut(s) 319, 354
BspANI GGCC 1 cut(s) 302
BspPI GGATC 2 cut(s) 327, 362
BsrDI GCAATG 1 cut(s) 366
BssECI CCNNGG 2 cut(s) 142, 315
BssMI GATC 2 cut(s) 319, 354
BssT1I CCWWGG 2 cut(s) 142, 315
Bst2UI CCWGG 2 cut(s) 104, 388
BstF5I GGATG 1 cut(s) 215
BstKTI GATC 2 cut(s) 322, 357
BstMBI GATC 2 cut(s) 319, 354
BstNI CCWGG 2 cut(s) 104, 388
BstSCI CCNGG 2 cut(s) 102, 386
BstSFI CTRYAG 2 cut(s) 342, 424
BstV1I GCAGC 2 cut(s) 426, 429
BsuRI GGCC 1 cut(s) 302
BtrI CACGTC 1 cut(s) 19
BtsCI GGATG 1 cut(s) 215
CviAII CATG 1 cut(s) 358
CviJI RGCY 4 cut(s) 68, 182, 302, 363
CviKI_1 RGCY 4 cut(s) 68, 182, 302, 363
DpnI GATC 2 cut(s) 321, 356
DpnII GATC 2 cut(s) 319, 354
EaeI YGGCCR 1 cut(s) 300
Ecl136II GAGCTC 1 cut(s) 68
Eco130I CCWWGG 2 cut(s) 142, 315
Eco24I GRGCYC 1 cut(s) 70
Eco32I GATATC 1 cut(s) 238
Eco53kI GAGCTC 1 cut(s) 68
EcoICRI GAGCTC 1 cut(s) 68
EcoRII CCWGG 2 cut(s) 102, 386
EcoRV GATATC 1 cut(s) 238
EcoT14I CCWWGG 2 cut(s) 142, 315
EcoT38I GRGCYC 1 cut(s) 70
ErhI CCWWGG 2 cut(s) 142, 315
FaeI CATG 1 cut(s) 361
FaiI YATR 9 cut(s) 9, 78, 111, 179, 310, 329, 359, 426, 517
FalI AAGNNNNNCTT 2 cut(s) 121, 153
FaqI GGGAC 1 cut(s) 164
FatI CATG 1 cut(s) 357
Fnu4HI GCNGC 2 cut(s) 440, 443
FokI GGATG 1 cut(s) 222
FriOI GRGCYC 1 cut(s) 70
Fsp4HI GCNGC 2 cut(s) 440, 443
GluI GCNGC 2 cut(s) 440, 443
GsuI CTGGAG 1 cut(s) 86
HaeIII GGCC 1 cut(s) 302
Hin1II CATG 1 cut(s) 361
HinfI GANTC 1 cut(s) 222
HphI GGTGA 1 cut(s) 5
Hpy166II GTNNAC 1 cut(s) 508
Hpy188I TCNGA 1 cut(s) 289
Hpy8I GTNNAC 1 cut(s) 508
HpyAV CCTTC 3 cut(s) 123, 343, 456
HpyCH4IV ACGT 1 cut(s) 18
HpyCH4V TGCA 3 cut(s) 50, 160, 371
HpySE526I ACGT 1 cut(s) 18
Hsp92II CATG 1 cut(s) 361
Kzo9I GATC 2 cut(s) 319, 354
LmnI GCTCC 1 cut(s) 105
LpnPI CCDG 9 cut(s) 56, 89, 116, 191, 284, 373, 387, 400, 459
Lsp1109I GCAGC 2 cut(s) 426, 429
LweI GCATC 1 cut(s) 200
MaeII ACGT 1 cut(s) 18
MalI GATC 2 cut(s) 321, 356
MboI GATC 2 cut(s) 319, 354
MboII GAAGA 2 cut(s) 191, 478
MhlI GDGCHC 1 cut(s) 70
MlsI TGGCCA 1 cut(s) 302
MluCI AATT 2 cut(s) 305, 391
MluNI TGGCCA 1 cut(s) 302
MnlI CCTC 2 cut(s) 236, 452
Mox20I TGGCCA 1 cut(s) 302
MroXI GAANNNNTTC 2 cut(s) 137, 198
MscI TGGCCA 1 cut(s) 302
MslI CAYNNNNRTG 1 cut(s) 21
Msp20I TGGCCA 1 cut(s) 302
MspR9I CCNGG 2 cut(s) 104, 388
Mva1269I GAATGC 2 cut(s) 441, 475
MvaI CCWGG 2 cut(s) 104, 388
NdeII GATC 2 cut(s) 319, 354
NlaIII CATG 1 cut(s) 361
PctI GAATGC 2 cut(s) 441, 475
PdmI GAANNNNTTC 2 cut(s) 137, 198
PfeI GAWTC 1 cut(s) 222
PfoI TCCNGGA 2 cut(s) 102, 386
PkrI GCNGC 2 cut(s) 441, 444
Psp124BI GAGCTC 1 cut(s) 70
Psp6I CCWGG 2 cut(s) 102, 386
PspGI CCWGG 2 cut(s) 102, 386
RseI CAYNNNNRTG 1 cut(s) 21
SacI GAGCTC 1 cut(s) 70
SatI GCNGC 2 cut(s) 440, 443
Sau3AI GATC 2 cut(s) 319, 354
ScrFI CCNGG 2 cut(s) 104, 388
SduI GDGCHC 1 cut(s) 70
SetI ASST 2 cut(s) 21, 70
SfaNI GCATC 1 cut(s) 200
SfcI CTRYAG 2 cut(s) 342, 424
SmiMI CAYNNNNRTG 1 cut(s) 21
SmlI CTYRAG 1 cut(s) 446
SmoI CTYRAG 1 cut(s) 446
Sse9I AATT 2 cut(s) 305, 391
SspI AATATT 1 cut(s) 253
SstI GAGCTC 1 cut(s) 70
StyD4I CCNGG 2 cut(s) 102, 386
StyI CCWWGG 2 cut(s) 142, 315
TaiI ACGT 1 cut(s) 21
TaqI TCGA 1 cut(s) 234
TasI AATT 2 cut(s) 305, 391
TfiI GAWTC 1 cut(s) 222
TseI GCWGC 2 cut(s) 439, 442
TspDTI ATGAA 3 cut(s) 105, 191, 516
XapI RAATTY 1 cut(s) 391
XmnI GAANNNNTTC 2 cut(s) 137, 198
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.