Prupe.7G254100_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
21388887 .. 21389225
339 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G254100.1

Sequence Viewer

Length: 339 bp
ATGACTAGCGCAGGAGTTGCTGGGATGATGTTTCAGTGTGTGTTTGAAGGAAGCCTGTCAATGAGGGACACCGAAATTGAGCGAAGGCCTTACCATAAGAACTGCAGTTGTGCTCTGCACAAGTCCAAGTGGGGTGCTTGCTCCAATGCTTGTCAAAGGAACATTTCCTTTCCCAAGAAACATTCATGGAGTGATGGTTCCTTGTGCATGCAGGCAACAGCTTCTTCCAAATTCTCTTCTCCTCTCATTGACAACATCTCCCCGTCCACTCCCACATCCACAGGAAACAGAGGAAGTGTCAGTGGTGTACAAAATCCGGCCTCATCACATAGACAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

113

Amino Acids

12.07

Weight (kDa)

9.27

Isoelectric Point (pI)

62.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 230
AfaI GTAC 1 cut(s) 309
AgsI TTSAA 1 cut(s) 47
AloI GAACNNNNNNTCC 2 cut(s) 181, 213
AluBI AGCT 1 cut(s) 221
AluI AGCT 1 cut(s) 221
Alw21I GWGCWC 1 cut(s) 115
AoxI GGCC 2 cut(s) 86, 318
ApoI RAATTY 1 cut(s) 230
AspLEI GCGC 1 cut(s) 11
Bbv12I GWGCWC 1 cut(s) 115
BccI CCATC 1 cut(s) 188
BfaI CTAG 1 cut(s) 6
BfmI CTRYAG 1 cut(s) 103
BmiI GGNNCC 1 cut(s) 199
BsaXI ACNNNNNCTCC 4 cut(s) 181, 211, 242, 272
BseGI GGATG 2 cut(s) 30, 275
BseRI GAGGAG 1 cut(s) 231
BseYI CCCAGC 1 cut(s) 20
BsgI GTGCAG 1 cut(s) 101
BshFI GGCC 2 cut(s) 88, 320
BsiHKAI GWGCWC 1 cut(s) 115
BsiSI CCGG 1 cut(s) 317
BslFI GGGAC 1 cut(s) 80
BsmFI GGGAC 1 cut(s) 80
BsnI GGCC 2 cut(s) 88, 320
Bsp1286I GDGCHC 1 cut(s) 115
Bsp1407I TGTACA 1 cut(s) 307
BspANI GGCC 2 cut(s) 88, 320
BspLI GGNNCC 1 cut(s) 199
BspMAI CTGCAG 1 cut(s) 107
BsrGI TGTACA 1 cut(s) 307
Bst6I CTCTTC 1 cut(s) 241
BstAPI GCANNNNNTGC 1 cut(s) 17
BstAUI TGTACA 1 cut(s) 307
BstC8I GCNNGC 3 cut(s) 139, 209, 213
BstF5I GGATG 2 cut(s) 30, 275
BstHHI GCGC 1 cut(s) 11
BstMWI GCNNNNNNNGC 1 cut(s) 17
BstNSI RCATGY 1 cut(s) 211
BstSFI CTRYAG 1 cut(s) 103
BsuRI GGCC 2 cut(s) 88, 320
BtsCI GGATG 2 cut(s) 30, 275
BtsIMutI CAGTG 2 cut(s) 41, 307
Cac8I GCNNGC 3 cut(s) 139, 209, 213
CfoI GCGC 1 cut(s) 11
Csp6I GTAC 1 cut(s) 308
CviAII CATG 2 cut(s) 186, 208
CviJI RGCY 4 cut(s) 54, 88, 221, 320
CviKI_1 RGCY 4 cut(s) 54, 88, 221, 320
CviQI GTAC 1 cut(s) 308
Eam1104I CTCTTC 1 cut(s) 241
EarI CTCTTC 1 cut(s) 241
Eco147I AGGCCT 1 cut(s) 88
FaeI CATG 2 cut(s) 189, 211
FaiI YATR 4 cut(s) 96, 187, 209, 330
FaqI GGGAC 1 cut(s) 80
FatI CATG 2 cut(s) 185, 207
FokI GGATG 2 cut(s) 37, 262
FspBI CTAG 1 cut(s) 6
GlaI GCGC 1 cut(s) 10
GsaI CCCAGC 1 cut(s) 24
HaeIII GGCC 2 cut(s) 88, 320
HapII CCGG 1 cut(s) 317
HhaI GCGC 1 cut(s) 11
Hin1II CATG 2 cut(s) 189, 211
Hin6I GCGC 1 cut(s) 9
HinP1I GCGC 1 cut(s) 9
HpaII CCGG 1 cut(s) 317
Hpy166II GTNNAC 2 cut(s) 267, 308
Hpy8I GTNNAC 2 cut(s) 267, 308
HpyAV CCTTC 2 cut(s) 41, 78
HpyCH4V TGCA 4 cut(s) 105, 118, 207, 211
HpyF10VI GCNNNNNNNGC 1 cut(s) 17
Hsp92II CATG 2 cut(s) 189, 211
HspAI GCGC 1 cut(s) 9
LmnI GCTCC 1 cut(s) 146
LpnPI CCDG 5 cut(s) 6, 68, 197, 267, 330
MaeI CTAG 1 cut(s) 6
MboII GAAGA 2 cut(s) 216, 228
MhlI GDGCHC 1 cut(s) 115
MluCI AATT 2 cut(s) 75, 230
MnlI CCTC 4 cut(s) 57, 252, 284, 331
MspI CCGG 1 cut(s) 317
MwoI GCNNNNNNNGC 1 cut(s) 17
NlaIII CATG 2 cut(s) 189, 211
NlaIV GGNNCC 1 cut(s) 199
NspI RCATGY 1 cut(s) 211
PaeI GCATGC 1 cut(s) 211
PceI AGGCCT 1 cut(s) 88
PspFI CCCAGC 1 cut(s) 20
PspN4I GGNNCC 1 cut(s) 199
PstI CTGCAG 1 cut(s) 107
RsaI GTAC 1 cut(s) 309
RsaNI GTAC 1 cut(s) 308
SduI GDGCHC 1 cut(s) 115
SetI ASST 1 cut(s) 223
SfcI CTRYAG 1 cut(s) 103
SphI GCATGC 1 cut(s) 211
Sse9I AATT 2 cut(s) 75, 230
SseBI AGGCCT 1 cut(s) 88
SspMI CTAG 1 cut(s) 6
StuI AGGCCT 1 cut(s) 88
TasI AATT 2 cut(s) 75, 230
TatI WGTACW 1 cut(s) 307
TscAI CASTG 2 cut(s) 41, 307
TspDTI ATGAA 1 cut(s) 174
TspRI CASTG 2 cut(s) 41, 307
XapI RAATTY 1 cut(s) 230
XceI RCATGY 1 cut(s) 211
XspI CTAG 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.