Prupe.7G254200_v2.0.a1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0001210
Physical Location & Seq
Forward (+)
21391564 .. 21392291
728 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G254200.1

Sequence Viewer

Length: 276 bp
ATGACTACCGCAGGAGTTGCTGGGATGATGTTTCAGTGTGTGTTTGAAGGAAGTCTGTCAATGAGAGACACCGAAATTGAGCGAAGGCCTTACCATAAGAACTGTAGTTGTGCTCTTCACAAATCCAAAGGGGGTGCTTGCTCGAATGCTTGCCAAAGGAACATTTCCTTTCCCAAGAAACAGTCATGGACTGATGGTTCCTTGTGCATGCAGGCAGCAGTTTCTTCCAAATTCTCTTCTCCTCTAGTTGTCTTATGGACAAAATGCAGGCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

92

Amino Acids

10.05

Weight (kDa)

9.3

Isoelectric Point (pI)

69.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 9
AcsI RAATTY 1 cut(s) 230
AgsI TTSAA 1 cut(s) 47
AloI GAACNNNNNNTCC 2 cut(s) 181, 213
Alw21I GWGCWC 1 cut(s) 115
Alw26I GTCTC 1 cut(s) 60
AoxI GGCC 1 cut(s) 86
ApeKI GCWGC 1 cut(s) 215
ApoI RAATTY 1 cut(s) 230
Bbv12I GWGCWC 1 cut(s) 115
BbvI GCAGC 1 cut(s) 227
BccI CCATC 1 cut(s) 188
BcoDI GTCTC 1 cut(s) 60
BfaI CTAG 1 cut(s) 245
BfmI CTRYAG 1 cut(s) 103
BisI GCNGC 1 cut(s) 216
BlsI GCNGC 1 cut(s) 217
BmiI GGNNCC 1 cut(s) 199
BseGI GGATG 1 cut(s) 30
BseRI GAGGAG 1 cut(s) 231
BseXI GCAGC 1 cut(s) 227
BseYI CCCAGC 1 cut(s) 20
BshFI GGCC 1 cut(s) 88
BsiHKAI GWGCWC 1 cut(s) 115
BsmAI GTCTC 1 cut(s) 60
BsmI GAATGC 1 cut(s) 151
BsnI GGCC 1 cut(s) 88
Bsp1286I GDGCHC 1 cut(s) 115
BspACI CCGC 1 cut(s) 9
BspANI GGCC 1 cut(s) 88
BspLI GGNNCC 1 cut(s) 199
BspQI GCTCTTC 1 cut(s) 120
Bst4CI ACNGT 2 cut(s) 104, 183
Bst6I CTCTTC 2 cut(s) 120, 241
BstAPI GCANNNNNTGC 1 cut(s) 17
BstC8I GCNNGC 5 cut(s) 139, 151, 209, 213, 269
BstF5I GGATG 1 cut(s) 30
BstMAI GTCTC 1 cut(s) 60
BstMWI GCNNNNNNNGC 1 cut(s) 17
BstNSI RCATGY 1 cut(s) 211
BstSFI CTRYAG 1 cut(s) 103
BstV1I GCAGC 1 cut(s) 227
BsuRI GGCC 1 cut(s) 88
BtsCI GGATG 1 cut(s) 30
BtsIMutI CAGTG 1 cut(s) 41
Cac8I GCNNGC 5 cut(s) 139, 151, 209, 213, 269
CviAII CATG 2 cut(s) 186, 208
CviJI RGCY 1 cut(s) 88
CviKI_1 RGCY 1 cut(s) 88
Eam1104I CTCTTC 2 cut(s) 120, 241
EarI CTCTTC 2 cut(s) 120, 241
Eco147I AGGCCT 1 cut(s) 88
FaeI CATG 2 cut(s) 189, 211
FaiI YATR 4 cut(s) 96, 187, 209, 256
FatI CATG 2 cut(s) 185, 207
Fnu4HI GCNGC 1 cut(s) 216
FokI GGATG 1 cut(s) 37
Fsp4HI GCNGC 1 cut(s) 216
FspBI CTAG 1 cut(s) 245
GluI GCNGC 1 cut(s) 216
GsaI CCCAGC 1 cut(s) 24
HaeIII GGCC 1 cut(s) 88
Hin1II CATG 2 cut(s) 189, 211
HpyAV CCTTC 2 cut(s) 41, 78
HpyCH4III ACNGT 2 cut(s) 104, 183
HpyCH4V TGCA 3 cut(s) 207, 211, 267
HpyF10VI GCNNNNNNNGC 1 cut(s) 17
Hsp92II CATG 2 cut(s) 189, 211
LguI GCTCTTC 1 cut(s) 120
LpnPI CCDG 3 cut(s) 6, 197, 253
Lsp1109I GCAGC 1 cut(s) 227
MaeI CTAG 1 cut(s) 245
MboII GAAGA 3 cut(s) 107, 216, 228
MhlI GDGCHC 1 cut(s) 115
MluCI AATT 2 cut(s) 75, 230
MnlI CCTC 1 cut(s) 252
Mva1269I GAATGC 1 cut(s) 151
MwoI GCNNNNNNNGC 1 cut(s) 17
NlaIII CATG 2 cut(s) 189, 211
NlaIV GGNNCC 1 cut(s) 199
NspI RCATGY 1 cut(s) 211
PaeI GCATGC 1 cut(s) 211
PceI AGGCCT 1 cut(s) 88
PciSI GCTCTTC 1 cut(s) 120
PctI GAATGC 1 cut(s) 151
PkrI GCNGC 1 cut(s) 217
PspFI CCCAGC 1 cut(s) 20
PspN4I GGNNCC 1 cut(s) 199
SapI GCTCTTC 1 cut(s) 120
SatI GCNGC 1 cut(s) 216
SduI GDGCHC 1 cut(s) 115
SfcI CTRYAG 1 cut(s) 103
SphI GCATGC 1 cut(s) 211
Sse9I AATT 2 cut(s) 75, 230
SseBI AGGCCT 1 cut(s) 88
SsiI CCGC 1 cut(s) 9
SspMI CTAG 1 cut(s) 245
StuI AGGCCT 1 cut(s) 88
TaaI ACNGT 2 cut(s) 104, 183
TaqI TCGA 1 cut(s) 143
TasI AATT 2 cut(s) 75, 230
TscAI CASTG 1 cut(s) 41
TseI GCWGC 1 cut(s) 215
TspRI CASTG 1 cut(s) 41
XapI RAATTY 1 cut(s) 230
XceI RCATGY 1 cut(s) 211
XspI CTAG 1 cut(s) 245
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.